I: pbuilder: network access will be disabled during build I: Current time: Wed Dec 10 04:35:16 +14 2025 I: pbuilder-time-stamp: 1765290916 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [cctbx_2024.8+ds2+~3.21.1+ds1-3.dsc] I: copying [./cctbx_2024.8+ds2+~3.21.1+ds1.orig-dxtbx.tar.xz] I: copying [./cctbx_2024.8+ds2+~3.21.1+ds1.orig.tar.xz] I: copying [./cctbx_2024.8+ds2+~3.21.1+ds1-3.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Oct 1 18:50:48 2024 gpgv: using RSA key B415360F591EB6DD73AFFB83D30DECD2599322FC gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cctbx_2024.8+ds2+~3.21.1+ds1-3.dsc: no acceptable signature found dpkg-source: info: extracting cctbx in cctbx-2024.8+ds2+~3.21.1+ds1 dpkg-source: info: unpacking cctbx_2024.8+ds2+~3.21.1+ds1.orig.tar.xz dpkg-source: info: unpacking cctbx_2024.8+ds2+~3.21.1+ds1.orig-dxtbx.tar.xz dpkg-source: info: unpacking cctbx_2024.8+ds2+~3.21.1+ds1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying workaround_env_config.patch dpkg-source: info: applying boost_adaptbx.patch dpkg-source: info: applying reproducible-timestamp.patch dpkg-source: info: applying libtbx_env-per-python-version.patch dpkg-source: info: applying iotbx_with_system_libraries.patch dpkg-source: info: applying 0007-iotbx-mtz-load-ccp4-data-from-the-right-directory.patch dpkg-source: info: applying 0009-scons-soname.patch dpkg-source: info: applying 0010-fix-cbflib_adaptbx-compilation-with-the-system-cbfli.patch dpkg-source: info: applying 0011-dxtbx-use-the-system-libraries.patch dpkg-source: info: applying 0013-dxtbx-do-not-modify-the-HDF5_PLUGIN_PATH.patch dpkg-source: info: applying 0015-dxtbx-adapte-the-boost_python-link-name.patch dpkg-source: info: applying 0016-cctbx-avoid-FTBFS-when-cctbx-is-already-installed.patch dpkg-source: info: applying 0017-cctbx-do-not-hide-sign-comparison.patch dpkg-source: info: applying 0017-dxtbx-fix-for-unsigned-char-arch.patch dpkg-source: info: applying 0016-unactivated-ucif-compilation.patch dpkg-source: info: applying 0017-smtbx-save-the-generated-test-file-under-tmp.patch dpkg-source: info: applying 0018-iotbx-link-with-ccp4c-instead-of-ccp4io.patch dpkg-source: info: applying 0019-cbflib_adapter-link-cbf-private-with-cbf.patch dpkg-source: info: applying 0020-spotfinder-link-with-dxtbxspotfinder.patch dpkg-source: info: applying 0021-rstbx-link-with-ann_adaptor.patch dpkg-source: info: applying 0022-rstbx-link-rstbx_integration_ext-with-ann_adaptor.patch dpkg-source: info: applying 0023-rstbx-use-the-annself_excluded-namespace-from-ann-cc.patch dpkg-source: info: applying 0024-more-ann-ann-cctbx.patch dpkg-source: info: applying 0031-Add-missing-ctdint-header.patch dpkg-source: info: applying 0032-no-future.patch dpkg-source: info: applying 0026-remove-distutils-in-some-modules.patch dpkg-source: info: applying 0027-Replace-unmaintained-orderedset-with-ordered_set.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/456915/tmp/hooks/D01_modify_environment starting debug: Running on ionos15-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 9 14:35 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/456915/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/456915/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=7e88dc462aa443d6a9dda44eb5a0baf9 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=456915 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.P8S50pSs/pbuilderrc_sPZ5 --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.P8S50pSs/b2 --logfile b2/build.log cctbx_2024.8+ds2+~3.21.1+ds1-3.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://213.165.73.152:3128 I: uname -a Linux i-capture-the-hostname 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/456915/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: architecture-is-64-bit, debhelper-compat (= 13), dh-exec, dh-python, dh-sequence-numpy3, dh-sequence-python3, jq, libann-cctbx-dev (>= 1.1.2+doc-9~), libantlr3c-dev, libboost-dev, libboost-numpy-dev, libboost-python-dev, libboost-thread-dev, libboost-timer-dev, libcbf-dev (>= 0.9.7+dfsg1-2~), libclipper-dev, libeigen3-dev, libexpat1-dev, libfftw3-dev, libgl-dev, libglu1-mesa-dev, libhdf5-dev, liblz4-dev, libssm-dev, libtiff-dev, libtool, pybind11-dev, python3-all-dev:any, python3-biopython, python3-h5py (>= 3), python3-hdf5plugin, python3-matplotlib, python3-mrcfile, python3-msgpack, python3-natsort, python3-numpy, python3-nxmx, python3-ordered-set, python3-pint, python3-pip, python3-procrunner, python3-psutil, python3-pycbf (>= 0.9.7+dfsg1-2~), python3-pymol, python3-pytest, python3-requests, python3-scipy, python3-setuptools, python3-six, python3-tqdm, python3-wxgtk4.0, rsync, scons dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19968 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on architecture-is-64-bit; however: Package architecture-is-64-bit is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-exec; however: Package dh-exec is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-numpy3; however: Package dh-sequence-numpy3 is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on jq; however: Package jq is not installed. pbuilder-satisfydepends-dummy depends on libann-cctbx-dev (>= 1.1.2+doc-9~); however: Package libann-cctbx-dev is not installed. pbuilder-satisfydepends-dummy depends on libantlr3c-dev; however: Package libantlr3c-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-numpy-dev; however: Package libboost-numpy-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-python-dev; however: Package libboost-python-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-thread-dev; however: Package libboost-thread-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev; however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libcbf-dev (>= 0.9.7+dfsg1-2~); however: Package libcbf-dev is not installed. pbuilder-satisfydepends-dummy depends on libclipper-dev; however: Package libclipper-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libexpat1-dev; however: Package libexpat1-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgl-dev; however: Package libgl-dev is not installed. pbuilder-satisfydepends-dummy depends on libglu1-mesa-dev; however: Package libglu1-mesa-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on liblz4-dev; however: Package liblz4-dev is not installed. pbuilder-satisfydepends-dummy depends on libssm-dev; however: Package libssm-dev is not installed. pbuilder-satisfydepends-dummy depends on libtiff-dev; however: Package libtiff-dev is not installed. pbuilder-satisfydepends-dummy depends on libtool; however: Package libtool is not installed. pbuilder-satisfydepends-dummy depends on pybind11-dev; however: Package pybind11-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev:any. pbuilder-satisfydepends-dummy depends on python3-biopython; however: Package python3-biopython is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py (>= 3); however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-hdf5plugin; however: Package python3-hdf5plugin is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-mrcfile; however: Package python3-mrcfile is not installed. pbuilder-satisfydepends-dummy depends on python3-msgpack; however: Package python3-msgpack is not installed. pbuilder-satisfydepends-dummy depends on python3-natsort; however: Package python3-natsort is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-nxmx; however: Package python3-nxmx is not installed. pbuilder-satisfydepends-dummy depends on python3-ordered-set; however: Package python3-ordered-set is not installed. pbuilder-satisfydepends-dummy depends on python3-pint; however: Package python3-pint is not installed. pbuilder-satisfydepends-dummy depends on python3-pip; however: Package python3-pip is not installed. pbuilder-satisfydepends-dummy depends on python3-procrunner; however: Package python3-procrunner is not installed. pbuilder-satisfydepends-dummy depends on python3-psutil; however: Package python3-psutil is not installed. pbuilder-satisfydepends-dummy depends on python3-pycbf (>= 0.9.7+dfsg1-2~); however: Package python3-pycbf is not installed. pbuilder-satisfydepends-dummy depends on python3-pymol; however: Package python3-pymol is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-six; however: Package python3-six is not installed. pbuilder-satisfydepends-dummy depends on python3-tqdm; however: Package python3-tqdm is not installed. pbuilder-satisfydepends-dummy depends on python3-wxgtk4.0; however: Package python3-wxgtk4.0 is not installed. pbuilder-satisfydepends-dummy depends on rsync; however: Package rsync is not installed. pbuilder-satisfydepends-dummy depends on scons; however: Package scons is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: adwaita-icon-theme{a} architecture-properties{a} at-spi2-common{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} dbus{a} dbus-bin{a} dbus-daemon{a} dbus-session-bus-common{a} dbus-system-bus-common{a} dbus-user-session{a} dconf-gsettings-backend{a} dconf-service{a} debhelper{a} dh-autoreconf{a} dh-exec{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} fftw-dev{a} fftw2{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-font-awesome{a} fonts-lato{a} fonts-lyx{a} fonts-urw-base35{a} gettext{a} gettext-base{a} groff-base{a} gtk-update-icon-cache{a} hdf5-helpers{a} hicolor-icon-theme{a} ibverbs-providers{a} intltool-debian{a} jq{a} libaec-dev{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libann-cctbx-dev{a} libann-cctbx0{a} libantlr3c-3.4-0{a} libantlr3c-dev{a} libapparmor1{a} libarchive-zip-perl{a} libatk-bridge2.0-0t64{a} libatk1.0-0t64{a} libatspi2.0-0t64{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-numpy-dev{a} libboost-numpy1.83-dev{a} libboost-numpy1.83.0{a} libboost-python-dev{a} libboost-python1.83-dev{a} libboost-python1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libcairo-gobject2{a} libcairo2{a} libcbf-dev{a} libcbf1t64{a} libccp4-data{a} libccp4-dev{a} libccp4c0t64{a} libccp4f0t64{a} libclipper-dev{a} libclipper2{a} libcloudproviders0{a} libcolord2{a} libcom-err2{a} libcups2t64{a} libcurl3t64-gnutls{a} libcurl4-openssl-dev{a} libcurl4t64{a} libdatrie1{a} libdbus-1-3{a} libdconf1{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdouble-conversion3{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1t64{a} libepoxy0{a} libevdev2{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgdk-pixbuf-2.0-0{a} libgdk-pixbuf2.0-common{a} libgfortran5{a} libgl-dev{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglew2.2{a} libglib2.0-0t64{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd0{a} libglx-dev{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgtk-3-0t64{a} libgtk-3-common{a} libgudev-1.0-0{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-cpp-103-1t64{a} libhdf5-dev{a} libhdf5-fortran-102t64{a} libhdf5-hl-100t64{a} libhdf5-hl-cpp-100t64{a} libhdf5-hl-fortran-100t64{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-plugins{a} libhwloc15{a} libibmad5{a} libibumad3{a} libibverbs1{a} libice6{a} libicu72{a} libidn2-dev{a} libimagequant0{a} libinput-bin{a} libinput10{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjq1{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc-dev{a} liblerc4{a} libllvm17t64{a} libllvm19{a} liblz4-dev{a} liblzf1{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libmd4c0{a} libmmdb2-0{a} libmmdb2-dev{a} libmtdev1t64{a} libmunge2{a} libnetcdf19t64{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnl-3-200{a} libnl-route-3-200{a} libnotify4{a} libnsl2{a} libnuma1{a} libonig5{a} libopengl-dev{a} libopengl0{a} libopenjp2-7{a} libopenmpi3t64{a} libp11-kit-dev{a} libpam-systemd{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpciaccess0{a} libpcre2-16-0{a} libpcre2-32-0{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpmix2t64{a} libpng16-16t64{a} libpopt0{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libqt5core5t64{a} libqt5dbus5t64{a} libqt5designer5{a} libqt5gui5t64{a} libqt5help5{a} libqt5network5t64{a} libqt5opengl5t64{a} libqt5printsupport5t64{a} libqt5sql5t64{a} libqt5test5t64{a} libqt5widgets5t64{a} libqt5xml5t64{a} libraqm0{a} librdmacm1t64{a} libreadline8t64{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv-dev{a} libsharpyuv0{a} libsm6{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libssm-dev{a} libssm2{a} libsystemd-shared{a} libsz2{a} libtasn1-6-dev{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff-dev{a} libtiff6{a} libtiffxx6{a} libtirpc-common{a} libtirpc3t64{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libunbound8{a} libvulkan1{a} libwacom-common{a} libwacom9{a} libwayland-client0{a} libwayland-cursor0{a} libwayland-egl1{a} libwayland-server0{a} libwebp-dev{a} libwebp7{a} libwebpdecoder3{a} libwebpdemux2{a} libwebpmux3{a} libwxbase3.2-1t64{a} libwxgtk-gl3.2-1t64{a} libwxgtk3.2-1t64{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present0{a} libxcb-randr0{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-shape0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-util1{a} libxcb-xfixes0{a} libxcb-xinerama0{a} libxcb-xinput0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxcomposite1{a} libxcursor1{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxft2{a} libxi6{a} libxinerama1{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxnvctrl0{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxtst6{a} libxxf86vm1{a} libz3-4{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mesa-libgallium{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} pybind11-dev{a} pymol-data{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-autocommand{a} python3-biopython{a} python3-brotli{a} python3-cairo{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-flexcache{a} python3-flexparser{a} python3-fonttools{a} python3-freetype{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-hdf5plugin{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-kiwisolver{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-mpmath{a} python3-mrcfile{a} python3-msgpack{a} python3-natsort{a} python3-numpy{a} python3-nxmx{a} python3-opengl{a} python3-ordered-set{a} python3-packaging{a} python3-pil{a} python3-pil.imagetk{a} python3-pint{a} python3-pip{a} python3-pkg-resources{a} python3-platformdirs{a} python3-pluggy{a} python3-procrunner{a} python3-psutil{a} python3-pycbf{a} python3-pymol{a} python3-pyparsing{a} python3-pyqt5{a} python3-pyqt5.qtopengl{a} python3-pyqt5.sip{a} python3-pytest{a} python3-reportlab{a} python3-requests{a} python3-rlpycairo{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-sympy{a} python3-tk{a} python3-tqdm{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wheel{a} python3-wxgtk4.0{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} python3.12-tk{a} python3.13-tk{a} readline-common{a} rsync{a} scons{a} sensible-utils{a} sfftw-dev{a} sfftw2{a} sgml-base{a} shared-mime-info{a} sphinx-rtd-theme-common{a} systemd{a} systemd-sysv{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} w3c-sgml-lib{a} x11-common{a} x11proto-dev{a} xfonts-encodings{a} xfonts-utils{a} xkb-data{a} xml-core{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: at-spi2-core chrony curl fonts-dejavu-extra hdf5-filter-plugin hdf5-filter-plugin-blosc-serial hdf5-filter-plugin-zfp-serial hdf5-plugin-lzf isympy-common javascript-common krb5-locales libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data libglut-dev libgtk-3-bin libkmod2 libldap-common libltdl-dev libmail-sendmail-perl libnss-systemd libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libqt5svg5 librsvg2-common libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mesa-vulkan-drivers ncbi-blast+ ntpsec openntpd psmisc publicsuffix python-biopython-doc python3-bs4 python3-cssselect python3-html5lib python3-olefile python3-pygments qt5-gtk-platformtheme qttranslations5-l10n qtwayland5 systemd-cryptsetup systemd-timesyncd wget xdg-user-dirs 0 packages upgraded, 494 newly installed, 0 to remove and 0 not upgraded. Need to get 330 MB of archives. After unpacking 1540 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libapparmor1 amd64 3.1.7-1+b2 [42.1 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libsystemd-shared amd64 256.7-3 [2068 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 systemd amd64 256.7-3 [3492 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 systemd-sysv amd64 256.7-3 [58.7 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 libdbus-1-3 amd64 1.14.10-6 [203 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 dbus-bin amd64 1.14.10-6 [106 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 dbus-session-bus-common all 1.14.10-6 [79.2 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.3-2 [105 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 dbus-daemon amd64 1.14.10-6 [185 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 dbus-system-bus-common all 1.14.10-6 [80.2 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 dbus amd64 1.14.10-6 [98.5 kB] Get: 12 http://deb.debian.org/debian unstable/main amd64 fonts-lato all 2.015-1 [2780 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.7-2 [815 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.7-2 [2161 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-3 [255 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.1-1+b1 [23.2 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 22 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 23 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.7-2 [1967 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.7-2 [671 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 33 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 libpopt0 amd64 1.19+dfsg-2 [43.8 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 rsync amd64 3.3.0-1 [419 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 sgml-base all 1.31 [15.4 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 48 http://deb.debian.org/debian unstable/main amd64 libpam-systemd amd64 256.7-3 [280 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-10 [97.2 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf2.0-common all 2.42.12+dfsg-1 [311 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 libglib2.0-0t64 amd64 2.82.2-2 [1501 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 shared-mime-info amd64 2.4-5+b1 [759 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 libpng16-16t64 amd64 1.6.44-2 [280 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 libdeflate0 amd64 1.22-1 [47.3 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 libjbig0 amd64 2.1-6.1+b2 [32.1 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 liblerc4 amd64 4.0.0+ds-5 [183 kB] Get: 62 http://deb.debian.org/debian unstable/main amd64 libsharpyuv0 amd64 1.4.0-0.1+b1 [113 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 libwebp7 amd64 1.4.0-0.1+b1 [313 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 libtiff6 amd64 4.5.1+git230720-5 [324 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 libgdk-pixbuf-2.0-0 amd64 2.42.12+dfsg-1+b1 [141 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 gtk-update-icon-cache amd64 4.16.3+ds-2 [50.1 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 hicolor-icon-theme all 0.18-1 [12.0 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 adwaita-icon-theme all 47.0-2 [463 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 architecture-properties amd64 0.2.3 [2184 B] Get: 70 http://deb.debian.org/debian unstable/main amd64 at-spi2-common all 2.54.0-1 [170 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libtcl8.6 amd64 8.6.15+dfsg-2 [1042 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b5 [307 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libfontenc1 amd64 1:1.1.8-1+b1 [23.3 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 xfonts-encodings all 1:1.0.4-2.2 [577 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 xfonts-utils amd64 1:7.7+7 [93.3 kB] Get: 85 http://deb.debian.org/debian unstable/main amd64 fonts-urw-base35 all 20200910-8 [10.8 MB] Get: 86 http://deb.debian.org/debian unstable/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 88 http://deb.debian.org/debian unstable/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 libxdmcp6 amd64 1:1.1.2-3+b2 [24.4 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 libxrender1 amd64 1:0.9.10-1.1+b2 [27.8 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 libxft2 amd64 2.3.6-1+b2 [54.5 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 libxss1 amd64 1:1.2.3-1+b2 [17.0 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 libtk8.6 amd64 8.6.15-1 [791 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 100 http://deb.debian.org/debian unstable/main amd64 dbus-user-session amd64 1.14.10-6 [79.0 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 libdconf1 amd64 0.40.0-4+b3 [41.9 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 dconf-service amd64 0.40.0-4+b3 [32.6 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 dconf-gsettings-backend amd64 0.40.0-4+b3 [28.8 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 110 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 dh-exec amd64 0.30 [25.6 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 123 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.20.2-1 [10.3 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-10+b1 [132 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-10+b1 [54.3 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 libnl-3-200 amd64 3.7.0-0.3+b1 [59.4 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 libnl-route-3-200 amd64 3.7.0-0.3+b1 [182 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 libibverbs1 amd64 52.0-2+b1 [62.2 kB] Get: 134 http://deb.debian.org/debian unstable/main amd64 ibverbs-providers amd64 52.0-2+b1 [343 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 libnuma1 amd64 2.0.18-1+b1 [22.3 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 libpsm2-2 amd64 11.2.185-2.1 [181 kB] Get: 138 http://deb.debian.org/debian unstable/main amd64 librdmacm1t64 amd64 52.0-2+b1 [70.4 kB] Get: 139 http://deb.debian.org/debian unstable/main amd64 libfabric1 amd64 1.17.0-3.1 [631 kB] Get: 140 http://deb.debian.org/debian unstable/main amd64 libhwloc15 amd64 2.11.2-1 [164 kB] Get: 141 http://deb.debian.org/debian unstable/main amd64 libmunge2 amd64 0.5.15-4+b1 [20.0 kB] Get: 142 http://deb.debian.org/debian unstable/main amd64 libpciaccess0 amd64 0.17-3+b2 [51.9 kB] Get: 143 http://deb.debian.org/debian unstable/main amd64 libxnvctrl0 amd64 535.171.04-1+b1 [14.2 kB] Get: 144 http://deb.debian.org/debian unstable/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b2 [40.2 kB] Get: 145 http://deb.debian.org/debian unstable/main amd64 libhwloc-plugins amd64 2.11.2-1 [18.1 kB] Get: 146 http://deb.debian.org/debian unstable/main amd64 libpmix2t64 amd64 5.0.3-2+b1 [662 kB] Get: 147 http://deb.debian.org/debian unstable/main amd64 libedit2 amd64 3.1-20240808-1 [93.9 kB] Get: 148 http://deb.debian.org/debian unstable/main amd64 libz3-4 amd64 4.13.3-1 [8560 kB] Get: 149 http://deb.debian.org/debian unstable/main amd64 libllvm17t64 amd64 1:17.0.6-18 [23.6 MB] Get: 150 http://deb.debian.org/debian unstable/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b2 [13.0 MB] Get: 151 http://deb.debian.org/debian unstable/main amd64 libdrm-common all 2.4.123-1 [8084 B] Get: 152 http://deb.debian.org/debian unstable/main amd64 libdrm2 amd64 2.4.123-1 [38.7 kB] Get: 153 http://deb.debian.org/debian unstable/main amd64 libdrm-amdgpu1 amd64 2.4.123-1 [22.3 kB] Get: 154 http://deb.debian.org/debian unstable/main amd64 libhsakmt1 amd64 6.1.2+ds-1 [59.8 kB] Get: 155 http://deb.debian.org/debian unstable/main amd64 libhsa-runtime64-1 amd64 6.1.2-2 [535 kB] Get: 156 http://deb.debian.org/debian unstable/main amd64 libamdhip64-5 amd64 5.7.1-5 [8877 kB] Get: 157 http://deb.debian.org/debian unstable/main amd64 libibumad3 amd64 52.0-2+b1 [28.2 kB] Get: 158 http://deb.debian.org/debian unstable/main amd64 libibmad5 amd64 52.0-2+b1 [43.4 kB] Get: 159 http://deb.debian.org/debian unstable/main amd64 libucx0 amd64 1.17.0+ds-3 [1130 kB] Get: 160 http://deb.debian.org/debian unstable/main amd64 libopenmpi3t64 amd64 5.0.5-3 [2007 kB] Get: 161 http://deb.debian.org/debian unstable/main amd64 fftw2 amd64 2.1.5-7 [251 kB] Get: 162 http://deb.debian.org/debian unstable/main amd64 fftw-dev amd64 2.1.5-7 [290 kB] Get: 163 http://deb.debian.org/debian unstable/main amd64 fontconfig amd64 2.15.0-1.1+b1 [463 kB] Get: 164 http://deb.debian.org/debian unstable/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 165 http://deb.debian.org/debian unstable/main amd64 fonts-lyx all 2.4.2.1-1 [190 kB] Get: 166 http://deb.debian.org/debian unstable/main amd64 hdf5-helpers amd64 1.10.10+repack-4 [23.5 kB] Get: 167 http://deb.debian.org/debian unstable/main amd64 libonig5 amd64 6.9.9-1+b1 [189 kB] Get: 168 http://deb.debian.org/debian unstable/main amd64 libjq1 amd64 1.7.1-3+b1 [164 kB] Get: 169 http://deb.debian.org/debian unstable/main amd64 jq amd64 1.7.1-3+b1 [77.8 kB] Get: 170 http://deb.debian.org/debian unstable/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 171 http://deb.debian.org/debian unstable/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 172 http://deb.debian.org/debian unstable/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get: 173 http://deb.debian.org/debian unstable/main amd64 libann-cctbx0 amd64 1.1.2+doc-9+b1 [32.4 kB] Get: 174 http://deb.debian.org/debian unstable/main amd64 libann-cctbx-dev amd64 1.1.2+doc-9+b1 [44.6 kB] Get: 175 http://deb.debian.org/debian unstable/main amd64 libantlr3c-3.4-0 amd64 3.4+dfsg-4+b2 [50.6 kB] Get: 176 http://deb.debian.org/debian unstable/main amd64 libantlr3c-dev amd64 3.4+dfsg-4+b2 [131 kB] Get: 177 http://deb.debian.org/debian unstable/main amd64 libatk1.0-0t64 amd64 2.54.0-1 [51.2 kB] Get: 178 http://deb.debian.org/debian unstable/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get: 179 http://deb.debian.org/debian unstable/main amd64 libatspi2.0-0t64 amd64 2.54.0-1 [76.4 kB] Get: 180 http://deb.debian.org/debian unstable/main amd64 libatk-bridge2.0-0t64 amd64 2.54.0-1 [67.6 kB] Get: 181 http://deb.debian.org/debian unstable/main amd64 libavahi-common-data amd64 0.8-13+b3 [112 kB] Get: 182 http://deb.debian.org/debian unstable/main amd64 libavahi-common3 amd64 0.8-13+b3 [43.2 kB] Get: 183 http://deb.debian.org/debian unstable/main amd64 libavahi-client3 amd64 0.8-13+b3 [47.5 kB] Get: 184 http://deb.debian.org/debian unstable/main amd64 libblas3 amd64 3.12.0-3+b1 [152 kB] Get: 185 http://deb.debian.org/debian unstable/main amd64 libboost1.83-dev amd64 1.83.0-3.2 [10.6 MB] Get: 186 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83.0 amd64 1.83.0-3.2 [234 kB] Get: 187 http://deb.debian.org/debian unstable/main amd64 libboost-atomic1.83-dev amd64 1.83.0-3.2 [235 kB] Get: 188 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83.0t64 amd64 1.83.0-3.2 [240 kB] Get: 189 http://deb.debian.org/debian unstable/main amd64 libboost-chrono1.83-dev amd64 1.83.0-3.2 [245 kB] Get: 190 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83.0 amd64 1.83.0-3.2 [230 kB] Get: 191 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83.0 amd64 1.83.0-3.2 [333 kB] Get: 192 http://deb.debian.org/debian unstable/main amd64 libboost-serialization1.83-dev amd64 1.83.0-3.2 [372 kB] Get: 193 http://deb.debian.org/debian unstable/main amd64 libboost-date-time1.83-dev amd64 1.83.0-3.2 [239 kB] Get: 194 http://deb.debian.org/debian unstable/main amd64 libboost-dev amd64 1.83.0.2+b2 [3836 B] Get: 195 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83.0 amd64 1.83.0-3.2 [306 kB] Get: 196 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83.0 amd64 1.83.0-3.2 [242 kB] Get: 197 http://deb.debian.org/debian unstable/main amd64 libboost-numpy1.83-dev amd64 1.83.0-3.2 [245 kB] Get: 198 http://deb.debian.org/debian unstable/main amd64 libboost-numpy-dev amd64 1.83.0.2+b2 [3644 B] Get: 199 http://deb.debian.org/debian unstable/main amd64 libpython3.12t64 amd64 3.12.7-2 [2150 kB] Get: 200 http://deb.debian.org/debian unstable/main amd64 libexpat1-dev amd64 2.6.3-2 [157 kB] Get: 201 http://deb.debian.org/debian unstable/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 202 http://deb.debian.org/debian unstable/main amd64 libpython3.12-dev amd64 3.12.7-2 [5125 kB] Get: 203 http://deb.debian.org/debian unstable/main amd64 libpython3-dev amd64 3.12.6-1 [9952 B] Get: 204 http://deb.debian.org/debian unstable/main amd64 python3.12-dev amd64 3.12.7-2 [505 kB] Get: 205 http://deb.debian.org/debian unstable/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 206 http://deb.debian.org/debian unstable/main amd64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 207 http://deb.debian.org/debian unstable/main amd64 libjs-sphinxdoc all 7.4.7-4 [158 kB] Get: 208 http://deb.debian.org/debian unstable/main amd64 python3-dev amd64 3.12.6-1 [26.1 kB] Get: 209 http://deb.debian.org/debian unstable/main amd64 libboost-python1.83-dev amd64 1.83.0-3.2 [327 kB] Get: 210 http://deb.debian.org/debian unstable/main amd64 libboost-python-dev amd64 1.83.0.2+b2 [3892 B] Get: 211 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83.0 amd64 1.83.0-3.2 [230 kB] Get: 212 http://deb.debian.org/debian unstable/main amd64 libboost-system1.83-dev amd64 1.83.0-3.2 [231 kB] Get: 213 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83.0 amd64 1.83.0-3.2 [269 kB] Get: 214 http://deb.debian.org/debian unstable/main amd64 libboost-thread1.83-dev amd64 1.83.0-3.2 [276 kB] Get: 215 http://deb.debian.org/debian unstable/main amd64 libboost-thread-dev amd64 1.83.0.2+b2 [3624 B] Get: 216 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83.0 amd64 1.83.0-3.2 [235 kB] Get: 217 http://deb.debian.org/debian unstable/main amd64 libboost-timer1.83-dev amd64 1.83.0-3.2 [236 kB] Get: 218 http://deb.debian.org/debian unstable/main amd64 libboost-timer-dev amd64 1.83.0.2+b2 [3716 B] Get: 219 http://deb.debian.org/debian unstable/main amd64 libbrotli-dev amd64 1.1.0-2+b5 [316 kB] Get: 220 http://deb.debian.org/debian unstable/main amd64 libpixman-1-0 amd64 0.42.2-1+b1 [556 kB] Get: 221 http://deb.debian.org/debian unstable/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 222 http://deb.debian.org/debian unstable/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 223 http://deb.debian.org/debian unstable/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 224 http://deb.debian.org/debian unstable/main amd64 libcairo-gobject2 amd64 1.18.2-2 [130 kB] Get: 225 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 226 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 227 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 228 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 229 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 230 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 231 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 232 http://deb.debian.org/debian unstable/main amd64 libcurl4t64 amd64 8.10.1-2 [352 kB] Get: 233 http://deb.debian.org/debian unstable/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-4 [1253 kB] Get: 234 http://deb.debian.org/debian unstable/main amd64 libcbf1t64 amd64 0.9.7+dfsg1-4 [363 kB] Get: 235 http://deb.debian.org/debian unstable/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 236 http://deb.debian.org/debian unstable/main amd64 libhdf5-fortran-102t64 amd64 1.10.10+repack-4 [89.5 kB] Get: 237 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-4 [63.9 kB] Get: 238 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-fortran-100t64 amd64 1.10.10+repack-4 [40.5 kB] Get: 239 http://deb.debian.org/debian unstable/main amd64 libhdf5-cpp-103-1t64 amd64 1.10.10+repack-4 [130 kB] Get: 240 http://deb.debian.org/debian unstable/main amd64 libhdf5-hl-cpp-100t64 amd64 1.10.10+repack-4 [21.4 kB] Get: 241 http://deb.debian.org/debian unstable/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get: 242 http://deb.debian.org/debian unstable/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get: 243 http://deb.debian.org/debian unstable/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get: 244 http://deb.debian.org/debian unstable/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 245 http://deb.debian.org/debian unstable/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 246 http://deb.debian.org/debian unstable/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 247 http://deb.debian.org/debian unstable/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get: 248 http://deb.debian.org/debian unstable/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get: 249 http://deb.debian.org/debian unstable/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-2+b2 [329 kB] Get: 250 http://deb.debian.org/debian unstable/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-2+b2 [642 kB] Get: 251 http://deb.debian.org/debian unstable/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 252 http://deb.debian.org/debian unstable/main amd64 libunbound8 amd64 1.22.0-1 [598 kB] Get: 253 http://deb.debian.org/debian unstable/main amd64 libgnutls-dane0t64 amd64 3.8.6-2+b1 [439 kB] Get: 254 http://deb.debian.org/debian unstable/main amd64 libgnutls-openssl27t64 amd64 3.8.6-2+b1 [439 kB] Get: 255 http://deb.debian.org/debian unstable/main amd64 libp11-kit-dev amd64 0.25.5-2+b1 [208 kB] Get: 256 http://deb.debian.org/debian unstable/main amd64 libtasn1-6-dev amd64 4.19.0-3+b3 [98.9 kB] Get: 257 http://deb.debian.org/debian unstable/main amd64 nettle-dev amd64 3.10-1+b1 [1317 kB] Get: 258 http://deb.debian.org/debian unstable/main amd64 libgnutls28-dev amd64 3.8.6-2+b1 [1385 kB] Get: 259 http://deb.debian.org/debian unstable/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get: 260 http://deb.debian.org/debian unstable/main amd64 libssl-dev amd64 3.3.2-2 [2742 kB] Get: 261 http://deb.debian.org/debian unstable/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get: 262 http://deb.debian.org/debian unstable/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB] Get: 263 http://deb.debian.org/debian unstable/main amd64 libcurl4-openssl-dev amd64 8.10.1-2 [462 kB] Get: 264 http://deb.debian.org/debian unstable/main amd64 libhdf5-dev amd64 1.10.10+repack-4 [2652 kB] Get: 265 http://deb.debian.org/debian unstable/main amd64 libcbf-dev amd64 0.9.7+dfsg1-4 [455 kB] Get: 266 http://deb.debian.org/debian unstable/main amd64 libccp4-data all 8.0.0-4 [62.7 kB] Get: 267 http://deb.debian.org/debian unstable/main amd64 libccp4c0t64 amd64 8.0.0-4 [89.9 kB] Get: 268 http://deb.debian.org/debian unstable/main amd64 libmmdb2-0 amd64 2.0.22-1+b2 [342 kB] Get: 269 http://deb.debian.org/debian unstable/main amd64 libccp4f0t64 amd64 8.0.0-4 [208 kB] Get: 270 http://deb.debian.org/debian unstable/main amd64 libccp4-dev amd64 8.0.0-4 [42.9 kB] Get: 271 http://deb.debian.org/debian unstable/main amd64 sfftw2 amd64 2.1.5-7 [253 kB] Get: 272 http://deb.debian.org/debian unstable/main amd64 libclipper2 amd64 2.1.20201109-2+b3 [1183 kB] Get: 273 http://deb.debian.org/debian unstable/main amd64 libmmdb2-dev amd64 2.0.22-1+b2 [92.9 kB] Get: 274 http://deb.debian.org/debian unstable/main amd64 sfftw-dev amd64 2.1.5-7 [293 kB] Get: 275 http://deb.debian.org/debian unstable/main amd64 libclipper-dev amd64 2.1.20201109-2+b3 [82.4 kB] Get: 276 http://deb.debian.org/debian unstable/main amd64 libcloudproviders0 amd64 0.3.6-1+b1 [29.2 kB] Get: 277 http://deb.debian.org/debian unstable/main amd64 liblcms2-2 amd64 2.16-2 [160 kB] Get: 278 http://deb.debian.org/debian unstable/main amd64 libcolord2 amd64 1.4.7-1+b2 [140 kB] Get: 279 http://deb.debian.org/debian unstable/main amd64 libcups2t64 amd64 2.4.10-2 [251 kB] Get: 280 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.4.0-1+b1 [63.6 kB] Get: 281 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.6.0-1 [122 kB] Get: 282 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.6.0-1 [19.6 kB] Get: 283 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.10.1-2 [360 kB] Get: 284 http://deb.debian.org/debian unstable/main amd64 libdatrie1 amd64 0.2.13-3+b1 [38.1 kB] Get: 285 http://deb.debian.org/debian unstable/main amd64 libdeflate-dev amd64 1.22-1 [55.8 kB] Get: 286 http://deb.debian.org/debian unstable/main amd64 libdouble-conversion3 amd64 3.3.0-1+b2 [41.8 kB] Get: 287 http://deb.debian.org/debian unstable/main amd64 libdrm-intel1 amd64 2.4.123-1 [63.7 kB] Get: 288 http://deb.debian.org/debian unstable/main amd64 libdrm-radeon1 amd64 2.4.123-1 [22.3 kB] Get: 289 http://deb.debian.org/debian unstable/main amd64 libwayland-server0 amd64 1.23.0-1+b1 [34.2 kB] Get: 290 http://deb.debian.org/debian unstable/main amd64 libxcb-randr0 amd64 1.17.0-2+b1 [117 kB] Get: 291 http://deb.debian.org/debian unstable/main amd64 libglapi-mesa amd64 24.2.6-1 [38.0 kB] Get: 292 http://deb.debian.org/debian unstable/main amd64 libllvm19 amd64 1:19.1.3-1 [26.0 MB] Get: 293 http://deb.debian.org/debian unstable/main amd64 libsensors-config all 1:3.6.0-10 [14.6 kB] Get: 294 http://deb.debian.org/debian unstable/main amd64 libsensors5 amd64 1:3.6.0-10+b1 [35.1 kB] Get: 295 http://deb.debian.org/debian unstable/main amd64 libx11-xcb1 amd64 2:1.8.10-2 [241 kB] Get: 296 http://deb.debian.org/debian unstable/main amd64 libxcb-dri2-0 amd64 1.17.0-2+b1 [107 kB] Get: 297 http://deb.debian.org/debian unstable/main amd64 libxcb-dri3-0 amd64 1.17.0-2+b1 [107 kB] Get: 298 http://deb.debian.org/debian unstable/main amd64 libxcb-present0 amd64 1.17.0-2+b1 [106 kB] Get: 299 http://deb.debian.org/debian unstable/main amd64 libxcb-sync1 amd64 1.17.0-2+b1 [109 kB] Get: 300 http://deb.debian.org/debian unstable/main amd64 libxcb-xfixes0 amd64 1.17.0-2+b1 [109 kB] Get: 301 http://deb.debian.org/debian unstable/main amd64 libxshmfence1 amd64 1.3-1+b2 [8848 B] Get: 302 http://deb.debian.org/debian unstable/main amd64 mesa-libgallium amd64 24.2.6-1 [9185 kB] Get: 303 http://deb.debian.org/debian unstable/main amd64 libgbm1 amd64 24.2.6-1 [42.8 kB] Get: 304 http://deb.debian.org/debian unstable/main amd64 libwayland-client0 amd64 1.23.0-1+b1 [26.6 kB] Get: 305 http://deb.debian.org/debian unstable/main amd64 libegl-mesa0 amd64 24.2.6-1 [133 kB] Get: 306 http://deb.debian.org/debian unstable/main amd64 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 307 http://deb.debian.org/debian unstable/main amd64 libepoxy0 amd64 1.5.10-2 [193 kB] Get: 308 http://deb.debian.org/debian unstable/main amd64 libevdev2 amd64 1.13.3+dfsg-1 [32.2 kB] Get: 309 http://deb.debian.org/debian unstable/main amd64 libfftw3-double3 amd64 3.3.10-2 [781 kB] Get: 310 http://deb.debian.org/debian unstable/main amd64 libfftw3-long3 amd64 3.3.10-2 [347 kB] Get: 311 http://deb.debian.org/debian unstable/main amd64 libfftw3-quad3 amd64 3.3.10-2 [617 kB] Get: 312 http://deb.debian.org/debian unstable/main amd64 libfftw3-single3 amd64 3.3.10-2 [809 kB] Get: 313 http://deb.debian.org/debian unstable/main amd64 libfftw3-bin amd64 3.3.10-2 [51.0 kB] Get: 314 http://deb.debian.org/debian unstable/main amd64 libfftw3-dev amd64 3.3.10-2 [2113 kB] Get: 315 http://deb.debian.org/debian unstable/main amd64 libfribidi0 amd64 1.0.15-1 [71.8 kB] Get: 316 http://deb.debian.org/debian unstable/main amd64 libglvnd0 amd64 1.7.0-1+b2 [52.0 kB] Get: 317 http://deb.debian.org/debian unstable/main amd64 libxcb-glx0 amd64 1.17.0-2+b1 [122 kB] Get: 318 http://deb.debian.org/debian unstable/main amd64 libxfixes3 amd64 1:6.0.0-2+b2 [20.3 kB] Get: 319 http://deb.debian.org/debian unstable/main amd64 libxxf86vm1 amd64 1:1.1.4-1+b3 [19.3 kB] Get: 320 http://deb.debian.org/debian unstable/main amd64 libvulkan1 amd64 1.3.296.0-1 [126 kB] Get: 321 http://deb.debian.org/debian unstable/main amd64 libgl1-mesa-dri amd64 24.2.6-1 [43.9 kB] Get: 322 http://deb.debian.org/debian unstable/main amd64 libglx-mesa0 amd64 24.2.6-1 [154 kB] Get: 323 http://deb.debian.org/debian unstable/main amd64 libglx0 amd64 1.7.0-1+b2 [34.9 kB] Get: 324 http://deb.debian.org/debian unstable/main amd64 libgl1 amd64 1.7.0-1+b2 [89.5 kB] Get: 325 http://deb.debian.org/debian unstable/main amd64 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 326 http://deb.debian.org/debian unstable/main amd64 x11proto-dev all 2024.1-1 [603 kB] Get: 327 http://deb.debian.org/debian unstable/main amd64 libxau-dev amd64 1:1.0.11-1 [23.6 kB] Get: 328 http://deb.debian.org/debian unstable/main amd64 libxdmcp-dev amd64 1:1.1.2-3+b2 [40.8 kB] Get: 329 http://deb.debian.org/debian unstable/main amd64 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 330 http://deb.debian.org/debian unstable/main amd64 libxcb1-dev amd64 1.17.0-2+b1 [181 kB] Get: 331 http://deb.debian.org/debian unstable/main amd64 libx11-dev amd64 2:1.8.10-2 [891 kB] Get: 332 http://deb.debian.org/debian unstable/main amd64 libglx-dev amd64 1.7.0-1+b2 [15.8 kB] Get: 333 http://deb.debian.org/debian unstable/main amd64 libgl-dev amd64 1.7.0-1+b2 [101 kB] Get: 334 http://deb.debian.org/debian unstable/main amd64 libglew2.2 amd64 2.2.0-4+b2 [168 kB] Get: 335 http://deb.debian.org/debian unstable/main amd64 libopengl0 amd64 1.7.0-1+b2 [30.9 kB] Get: 336 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa amd64 9.0.2-1.1+b2 [185 kB] Get: 337 http://deb.debian.org/debian unstable/main amd64 libopengl-dev amd64 1.7.0-1+b2 [5388 B] Get: 338 http://deb.debian.org/debian unstable/main amd64 libglu1-mesa-dev amd64 9.0.2-1.1+b2 [223 kB] Get: 339 http://deb.debian.org/debian unstable/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 340 http://deb.debian.org/debian unstable/main amd64 libharfbuzz0b amd64 10.0.1-1 [477 kB] Get: 341 http://deb.debian.org/debian unstable/main amd64 libthai-data all 0.1.29-2 [168 kB] Get: 342 http://deb.debian.org/debian unstable/main amd64 libthai0 amd64 0.1.29-2+b1 [49.4 kB] Get: 343 http://deb.debian.org/debian unstable/main amd64 libpango-1.0-0 amd64 1.54.0+ds-3 [223 kB] Get: 344 http://deb.debian.org/debian unstable/main amd64 libpangoft2-1.0-0 amd64 1.54.0+ds-3 [54.2 kB] Get: 345 http://deb.debian.org/debian unstable/main amd64 libpangocairo-1.0-0 amd64 1.54.0+ds-3 [35.2 kB] Get: 346 http://deb.debian.org/debian unstable/main amd64 libwayland-cursor0 amd64 1.23.0-1+b1 [11.7 kB] Get: 347 http://deb.debian.org/debian unstable/main amd64 libwayland-egl1 amd64 1.23.0-1+b1 [5664 B] Get: 348 http://deb.debian.org/debian unstable/main amd64 libxcomposite1 amd64 1:0.4.6-1 [16.3 kB] Get: 349 http://deb.debian.org/debian unstable/main amd64 libxcursor1 amd64 1:1.2.2-1+b1 [37.6 kB] Get: 350 http://deb.debian.org/debian unstable/main amd64 libxdamage1 amd64 1:1.1.6-1+b2 [15.5 kB] Get: 351 http://deb.debian.org/debian unstable/main amd64 libxinerama1 amd64 2:1.1.4-3+b2 [16.0 kB] Get: 352 http://deb.debian.org/debian unstable/main amd64 xkb-data all 2.42-1 [790 kB] Get: 353 http://deb.debian.org/debian unstable/main amd64 libxkbcommon0 amd64 1.6.0-1+b2 [111 kB] Get: 354 http://deb.debian.org/debian unstable/main amd64 libxrandr2 amd64 2:1.5.4-1+b1 [36.3 kB] Get: 355 http://deb.debian.org/debian unstable/main amd64 libgtk-3-common all 3.24.43-4 [4657 kB] Get: 356 http://deb.debian.org/debian unstable/main amd64 libgtk-3-0t64 amd64 3.24.43-4 [2754 kB] Get: 357 http://deb.debian.org/debian unstable/main amd64 libgudev-1.0-0 amd64 238-5+b1 [14.8 kB] Get: 358 http://deb.debian.org/debian unstable/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 359 http://deb.debian.org/debian unstable/main amd64 libimagequant0 amd64 2.18.0-1+b2 [35.2 kB] Get: 360 http://deb.debian.org/debian unstable/main amd64 libwacom-common all 2.13.0-1 [98.0 kB] Get: 361 http://deb.debian.org/debian unstable/main amd64 libwacom9 amd64 2.13.0-1 [24.0 kB] Get: 362 http://deb.debian.org/debian unstable/main amd64 libinput-bin amd64 1.26.2-1 [25.3 kB] Get: 363 http://deb.debian.org/debian unstable/main amd64 libmtdev1t64 amd64 1.1.6-1.2+b1 [22.5 kB] Get: 364 http://deb.debian.org/debian unstable/main amd64 libinput10 amd64 1.26.2-1 [131 kB] Get: 365 http://deb.debian.org/debian unstable/main amd64 libjbig-dev amd64 2.1-6.1+b2 [31.4 kB] Get: 366 http://deb.debian.org/debian unstable/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 367 http://deb.debian.org/debian unstable/main amd64 liblapack3 amd64 3.12.0-3+b1 [2450 kB] Get: 368 http://deb.debian.org/debian unstable/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 369 http://deb.debian.org/debian unstable/main amd64 liblerc-dev amd64 4.0.0+ds-5 [183 kB] Get: 370 http://deb.debian.org/debian unstable/main amd64 liblz4-dev amd64 1.9.4-3+b1 [83.2 kB] Get: 371 http://deb.debian.org/debian unstable/main amd64 liblzf1 amd64 3.6-4+b2 [10.1 kB] Get: 372 http://deb.debian.org/debian unstable/main amd64 liblzma-dev amd64 5.6.3-1+b1 [316 kB] Get: 373 http://deb.debian.org/debian unstable/main amd64 libmd4c0 amd64 0.5.2-2+b1 [49.0 kB] Get: 374 http://deb.debian.org/debian unstable/main amd64 libnetcdf19t64 amd64 1:4.9.2-7 [477 kB] Get: 375 http://deb.debian.org/debian unstable/main amd64 libnotify4 amd64 0.8.3-1+b2 [25.9 kB] Get: 376 http://deb.debian.org/debian unstable/main amd64 libopenjp2-7 amd64 2.5.0-2+b4 [199 kB] Get: 377 http://deb.debian.org/debian unstable/main amd64 libpcre2-16-0 amd64 10.42-4+b2 [249 kB] Get: 378 http://deb.debian.org/debian unstable/main amd64 libpcre2-32-0 amd64 10.42-4+b2 [237 kB] Get: 379 http://deb.debian.org/debian unstable/main amd64 libpython3-all-dev amd64 3.12.6-1 [1064 B] Get: 380 http://deb.debian.org/debian unstable/main amd64 libqhull-r8.0 amd64 2020.2-6+b2 [248 kB] Get: 381 http://deb.debian.org/debian unstable/main amd64 libqt5core5t64 amd64 5.15.15+dfsg-2 [1866 kB] Get: 382 http://deb.debian.org/debian unstable/main amd64 libqt5dbus5t64 amd64 5.15.15+dfsg-2 [217 kB] Get: 383 http://deb.debian.org/debian unstable/main amd64 libegl1 amd64 1.7.0-1+b2 [34.6 kB] Get: 384 http://deb.debian.org/debian unstable/main amd64 libqt5network5t64 amd64 5.15.15+dfsg-2 [682 kB] Get: 385 http://deb.debian.org/debian unstable/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 386 http://deb.debian.org/debian unstable/main amd64 libxcb-icccm4 amd64 0.4.2-1 [27.5 kB] Get: 387 http://deb.debian.org/debian unstable/main amd64 libxcb-util1 amd64 0.4.0-1+b2 [22.5 kB] Get: 388 http://deb.debian.org/debian unstable/main amd64 libxcb-image0 amd64 0.4.0-2+b2 [22.2 kB] Get: 389 http://deb.debian.org/debian unstable/main amd64 libxcb-keysyms1 amd64 0.4.0-1+b3 [15.7 kB] Get: 390 http://deb.debian.org/debian unstable/main amd64 libxcb-render-util0 amd64 0.3.9-1+b2 [17.4 kB] Get: 391 http://deb.debian.org/debian unstable/main amd64 libxcb-shape0 amd64 1.17.0-2+b1 [106 kB] Get: 392 http://deb.debian.org/debian unstable/main amd64 libxcb-xinerama0 amd64 1.17.0-2+b1 [105 kB] Get: 393 http://deb.debian.org/debian unstable/main amd64 libxcb-xinput0 amd64 1.17.0-2+b1 [130 kB] Get: 394 http://deb.debian.org/debian unstable/main amd64 libxcb-xkb1 amd64 1.17.0-2+b1 [130 kB] Get: 395 http://deb.debian.org/debian unstable/main amd64 libxkbcommon-x11-0 amd64 1.6.0-1+b2 [16.3 kB] Get: 396 http://deb.debian.org/debian unstable/main amd64 libqt5gui5t64 amd64 5.15.15+dfsg-2 [3498 kB] Get: 397 http://deb.debian.org/debian unstable/main amd64 libqt5widgets5t64 amd64 5.15.15+dfsg-2 [2400 kB] Get: 398 http://deb.debian.org/debian unstable/main amd64 libqt5xml5t64 amd64 5.15.15+dfsg-2 [126 kB] Get: 399 http://deb.debian.org/debian unstable/main amd64 libqt5designer5 amd64 5.15.15-2 [2759 kB] Get: 400 http://deb.debian.org/debian unstable/main amd64 libqt5sql5t64 amd64 5.15.15+dfsg-2 [125 kB] Get: 401 http://deb.debian.org/debian unstable/main amd64 libqt5help5 amd64 5.15.15-2 [151 kB] Get: 402 http://deb.debian.org/debian unstable/main amd64 libqt5opengl5t64 amd64 5.15.15+dfsg-2 [150 kB] Get: 403 http://deb.debian.org/debian unstable/main amd64 libqt5printsupport5t64 amd64 5.15.15+dfsg-2 [206 kB] Get: 404 http://deb.debian.org/debian unstable/main amd64 libqt5test5t64 amd64 5.15.15+dfsg-2 [151 kB] Get: 405 http://deb.debian.org/debian unstable/main amd64 libraqm0 amd64 0.10.1-1+b2 [14.1 kB] Get: 406 http://deb.debian.org/debian unstable/main amd64 libsharpyuv-dev amd64 1.4.0-0.1+b1 [117 kB] Get: 407 http://deb.debian.org/debian unstable/main amd64 libssm2 amd64 1.4.0-2+b3 [84.3 kB] Get: 408 http://deb.debian.org/debian unstable/main amd64 libssm-dev amd64 1.4.0-2+b3 [15.2 kB] Get: 409 http://deb.debian.org/debian unstable/main amd64 libwebpdemux2 amd64 1.4.0-0.1+b1 [111 kB] Get: 410 http://deb.debian.org/debian unstable/main amd64 libwebpmux3 amd64 1.4.0-0.1+b1 [123 kB] Get: 411 http://deb.debian.org/debian unstable/main amd64 libwebpdecoder3 amd64 1.4.0-0.1+b1 [204 kB] Get: 412 http://deb.debian.org/debian unstable/main amd64 libwebp-dev amd64 1.4.0-0.1+b1 [442 kB] Get: 413 http://deb.debian.org/debian unstable/main amd64 libtiffxx6 amd64 4.5.1+git230720-5 [149 kB] Get: 414 http://deb.debian.org/debian unstable/main amd64 libtiff-dev amd64 4.5.1+git230720-5 [463 kB] Get: 415 http://deb.debian.org/debian unstable/main amd64 libwxbase3.2-1t64 amd64 3.2.6+dfsg-2 [1041 kB] Get: 416 http://deb.debian.org/debian unstable/main amd64 libxtst6 amd64 2:1.2.3-1.1+b2 [25.9 kB] Get: 417 http://deb.debian.org/debian unstable/main amd64 libwxgtk3.2-1t64 amd64 3.2.6+dfsg-2 [4695 kB] Get: 418 http://deb.debian.org/debian unstable/main amd64 libwxgtk-gl3.2-1t64 amd64 3.2.6+dfsg-2 [84.1 kB] Get: 419 http://deb.debian.org/debian unstable/main amd64 libxslt1.1 amd64 1.1.35-1.1+b1 [233 kB] Get: 420 http://deb.debian.org/debian unstable/main amd64 pybind11-dev all 2.13.6-1 [204 kB] Get: 421 http://deb.debian.org/debian unstable/main amd64 pymol-data all 3.0.0+dfsg-1 [1433 kB] Get: 422 http://deb.debian.org/debian unstable/main amd64 python-matplotlib-data all 3.8.3-3 [2731 kB] Get: 423 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.6-1 [1040 B] Get: 424 http://deb.debian.org/debian unstable/main amd64 python3-all-dev amd64 3.12.6-1 [1068 B] Get: 425 http://deb.debian.org/debian unstable/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 426 http://deb.debian.org/debian unstable/main amd64 python3-attr all 24.2.0-1 [68.4 kB] Get: 427 http://deb.debian.org/debian unstable/main amd64 python3-numpy amd64 1:1.26.4+ds-11 [4236 kB] Get: 428 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 429 http://deb.debian.org/debian unstable/main amd64 python3.12-tk amd64 3.12.7-2 [112 kB] Get: 430 http://deb.debian.org/debian unstable/main amd64 python3.13-tk amd64 3.13.0-1 [103 kB] Get: 431 http://deb.debian.org/debian unstable/main amd64 python3-tk amd64 3.12.6-1 [9428 B] Get: 432 http://deb.debian.org/debian unstable/main amd64 python3-pil.imagetk amd64 10.4.0-1 [79.4 kB] Get: 433 http://deb.debian.org/debian unstable/main amd64 python3-pil amd64 10.4.0-1 [502 kB] Get: 434 http://deb.debian.org/debian unstable/main amd64 python3-cairo amd64 1.26.1-2 [114 kB] Get: 435 http://deb.debian.org/debian unstable/main amd64 python3-freetype all 2.5.1-1 [89.3 kB] Get: 436 http://deb.debian.org/debian unstable/main amd64 python3-rlpycairo all 0.3.0-3 [9904 B] Get: 437 http://deb.debian.org/debian unstable/main amd64 python3-reportlab all 4.2.5-1 [1117 kB] Get: 438 http://deb.debian.org/debian unstable/main amd64 xml-core all 0.19 [20.1 kB] Get: 439 http://deb.debian.org/debian unstable/main amd64 w3c-sgml-lib all 1.3-3 [273 kB] Get: 440 http://deb.debian.org/debian unstable/main amd64 python3-biopython amd64 1.84+dfsg-4 [1646 kB] Get: 441 http://deb.debian.org/debian unstable/main amd64 python3-brotli amd64 1.1.0-2+b5 [318 kB] Get: 442 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 443 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1 [118 kB] Get: 444 http://deb.debian.org/debian unstable/main amd64 python3-contourpy amd64 1.3.0-2 [215 kB] Get: 445 http://deb.debian.org/debian unstable/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 446 http://deb.debian.org/debian unstable/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 447 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 448 http://deb.debian.org/debian unstable/main amd64 python3-flexcache all 0.3-2 [13.5 kB] Get: 449 http://deb.debian.org/debian unstable/main amd64 python3-flexparser all 0.3.1-2 [42.6 kB] Get: 450 http://deb.debian.org/debian unstable/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 451 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.16.0-7 [16.4 kB] Get: 452 http://deb.debian.org/debian unstable/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get: 453 http://deb.debian.org/debian unstable/main amd64 python3-lxml amd64 5.3.0-1 [1251 kB] Get: 454 http://deb.debian.org/debian unstable/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b4 [25.2 kB] Get: 455 http://deb.debian.org/debian unstable/main amd64 python3-scipy amd64 1.13.1-5 [16.7 MB] Get: 456 http://deb.debian.org/debian unstable/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 457 http://deb.debian.org/debian unstable/main amd64 python3-sympy all 1.13.3-1 [4147 kB] Get: 458 http://deb.debian.org/debian unstable/main amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 459 http://deb.debian.org/debian unstable/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 460 http://deb.debian.org/debian unstable/main amd64 python3-fonttools amd64 4.54.1-4 [1429 kB] Get: 461 http://deb.debian.org/debian unstable/main amd64 python3-h5py-serial amd64 3.11.0-7 [1018 kB] Get: 462 http://deb.debian.org/debian unstable/main amd64 python3-h5py all 3.11.0-7 [14.8 kB] Get: 463 http://deb.debian.org/debian unstable/main amd64 python3-hdf5plugin all 4.0.1-3 [22.9 kB] Get: 464 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 465 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 466 http://deb.debian.org/debian unstable/main amd64 python3-kiwisolver amd64 1.4.7-2 [60.9 kB] Get: 467 http://deb.debian.org/debian unstable/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 468 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.1-1 [45.8 kB] Get: 469 http://deb.debian.org/debian unstable/main amd64 python3-matplotlib amd64 3.8.3-3 [5560 kB] Get: 470 http://deb.debian.org/debian unstable/main amd64 sphinx-rtd-theme-common all 3.0.1+dfsg-1 [1022 kB] Get: 471 http://deb.debian.org/debian unstable/main amd64 python3-mrcfile all 1.5.3-3 [119 kB] Get: 472 http://deb.debian.org/debian unstable/main amd64 python3-msgpack amd64 1.0.3-3+b2 [80.4 kB] Get: 473 http://deb.debian.org/debian unstable/main amd64 python3-natsort all 8.0.2-2 [39.0 kB] Get: 474 http://deb.debian.org/debian unstable/main amd64 python3-platformdirs all 4.3.6-1 [16.6 kB] Get: 475 http://deb.debian.org/debian unstable/main amd64 python3-pint all 0.24.3-2 [224 kB] Get: 476 http://deb.debian.org/debian unstable/main amd64 python3-nxmx all 0.0.3-3 [15.4 kB] Get: 477 http://deb.debian.org/debian unstable/main amd64 python3-opengl all 3.1.7+dfsg-1 [604 kB] Get: 478 http://deb.debian.org/debian unstable/main amd64 python3-ordered-set all 4.1.0-1 [9628 B] Get: 479 http://deb.debian.org/debian unstable/main amd64 python3-wheel all 0.44.0-2 [53.4 kB] Get: 480 http://deb.debian.org/debian unstable/main amd64 python3-pip all 24.3.1+dfsg-1 [1441 kB] Get: 481 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 482 http://deb.debian.org/debian unstable/main amd64 python3-procrunner all 2.3.3-2 [13.9 kB] Get: 483 http://deb.debian.org/debian unstable/main amd64 python3-psutil amd64 5.9.8-2 [225 kB] Get: 484 http://deb.debian.org/debian unstable/main amd64 python3-pycbf amd64 0.9.7+dfsg1-4 [164 kB] Get: 485 http://deb.debian.org/debian unstable/main amd64 python3-pyqt5.sip amd64 12.15.0-1 [56.6 kB] Get: 486 http://deb.debian.org/debian unstable/main amd64 python3-pyqt5 amd64 5.15.11+dfsg-1+b1 [2521 kB] Get: 487 http://deb.debian.org/debian unstable/main amd64 python3-pyqt5.qtopengl amd64 5.15.11+dfsg-1+b1 [208 kB] Get: 488 http://deb.debian.org/debian unstable/main amd64 python3-pymol amd64 3.0.0+dfsg-1 [3839 kB] Get: 489 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.3-1 [249 kB] Get: 490 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.0.7-2 [111 kB] Get: 491 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 492 http://deb.debian.org/debian unstable/main amd64 python3-tqdm all 4.66.5-1 [90.1 kB] Get: 493 http://deb.debian.org/debian unstable/main amd64 python3-wxgtk4.0 amd64 4.2.2+dfsg-1 [7166 kB] Get: 494 http://deb.debian.org/debian unstable/main amd64 scons all 4.8.1+dfsg-1 [548 kB] Fetched 330 MB in 19s (17.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libapparmor1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19968 files and directories currently installed.) Preparing to unpack .../libapparmor1_3.1.7-1+b2_amd64.deb ... Unpacking libapparmor1:amd64 (3.1.7-1+b2) ... Selecting previously unselected package libsystemd-shared:amd64. Preparing to unpack .../libsystemd-shared_256.7-3_amd64.deb ... Unpacking libsystemd-shared:amd64 (256.7-3) ... Selecting previously unselected package systemd. Preparing to unpack .../systemd_256.7-3_amd64.deb ... Unpacking systemd (256.7-3) ... Setting up libapparmor1:amd64 (3.1.7-1+b2) ... Setting up libsystemd-shared:amd64 (256.7-3) ... Setting up systemd (256.7-3) ... Created symlink '/etc/systemd/system/getty.target.wants/getty@tty1.service' -> '/usr/lib/systemd/system/getty@.service'. Created symlink '/etc/systemd/system/multi-user.target.wants/remote-fs.target' -> '/usr/lib/systemd/system/remote-fs.target'. Created symlink '/etc/systemd/system/sysinit.target.wants/systemd-pstore.service' -> '/usr/lib/systemd/system/systemd-pstore.service'. Initializing machine ID from random generator. Creating group 'systemd-journal' with GID 999. Creating group 'systemd-network' with GID 998. Creating user 'systemd-network' (systemd Network Management) with UID 998 and GID 998. /usr/lib/tmpfiles.d/legacy.conf:13: Duplicate line for path "/run/lock", ignoring. Selecting previously unselected package systemd-sysv. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20919 files and directories currently installed.) Preparing to unpack .../00-systemd-sysv_256.7-3_amd64.deb ... Unpacking systemd-sysv (256.7-3) ... Selecting previously unselected package libdbus-1-3:amd64. Preparing to unpack .../01-libdbus-1-3_1.14.10-6_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.14.10-6) ... Selecting previously unselected package dbus-bin. Preparing to unpack .../02-dbus-bin_1.14.10-6_amd64.deb ... Unpacking dbus-bin (1.14.10-6) ... Selecting previously unselected package dbus-session-bus-common. Preparing to unpack .../03-dbus-session-bus-common_1.14.10-6_all.deb ... Unpacking dbus-session-bus-common (1.14.10-6) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../04-libexpat1_2.6.3-2_amd64.deb ... Unpacking libexpat1:amd64 (2.6.3-2) ... Selecting previously unselected package dbus-daemon. Preparing to unpack .../05-dbus-daemon_1.14.10-6_amd64.deb ... Unpacking dbus-daemon (1.14.10-6) ... Selecting previously unselected package dbus-system-bus-common. Preparing to unpack .../06-dbus-system-bus-common_1.14.10-6_all.deb ... Unpacking dbus-system-bus-common (1.14.10-6) ... Selecting previously unselected package dbus. Preparing to unpack .../07-dbus_1.14.10-6_amd64.deb ... Unpacking dbus (1.14.10-6) ... Selecting previously unselected package fonts-lato. Preparing to unpack .../08-fonts-lato_2.015-1_all.deb ... Unpacking fonts-lato (2.015-1) ... Selecting previously unselected package libpython3.12-minimal:amd64. Preparing to unpack .../09-libpython3.12-minimal_3.12.7-2_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.7-2) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../10-python3.12-minimal_3.12.7-2_amd64.deb ... Unpacking python3.12-minimal (3.12.7-2) ... Setting up libpython3.12-minimal:amd64 (3.12.7-2) ... Setting up libexpat1:amd64 (2.6.3-2) ... Setting up python3.12-minimal (3.12.7-2) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21357 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_amd64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-2_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.7-2) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-2_amd64.deb ... Unpacking python3.12 (3.12.7-2) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 22419 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.6-1_amd64.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package libpopt0:amd64. Preparing to unpack .../001-libpopt0_1.19+dfsg-2_amd64.deb ... Unpacking libpopt0:amd64 (1.19+dfsg-2) ... Selecting previously unselected package rsync. Preparing to unpack .../002-rsync_3.3.0-1_amd64.deb ... Unpacking rsync (3.3.0-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../004-libproc2-0_2%3a4.0.4-6_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../005-procps_2%3a4.0.4-6_amd64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../006-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../007-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../008-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../009-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../010-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../011-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../012-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../013-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../014-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package libpam-systemd:amd64. Preparing to unpack .../015-libpam-systemd_256.7-3_amd64.deb ... Unpacking libpam-systemd:amd64 (256.7-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../016-bsdextrautils_2.40.2-10_amd64.deb ... Unpacking bsdextrautils (2.40.2-10) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../017-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../018-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package libgdk-pixbuf2.0-common. Preparing to unpack .../019-libgdk-pixbuf2.0-common_2.42.12+dfsg-1_all.deb ... Unpacking libgdk-pixbuf2.0-common (2.42.12+dfsg-1) ... Selecting previously unselected package libglib2.0-0t64:amd64. Preparing to unpack .../020-libglib2.0-0t64_2.82.2-2_amd64.deb ... Unpacking libglib2.0-0t64:amd64 (2.82.2-2) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../021-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../022-libxml2_2.12.7+dfsg+really2.9.14-0.1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package shared-mime-info. Preparing to unpack .../023-shared-mime-info_2.4-5+b1_amd64.deb ... Unpacking shared-mime-info (2.4-5+b1) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../024-libjpeg62-turbo_1%3a2.1.5-3+b1_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.1.5-3+b1) ... Selecting previously unselected package libpng16-16t64:amd64. Preparing to unpack .../025-libpng16-16t64_1.6.44-2_amd64.deb ... Unpacking libpng16-16t64:amd64 (1.6.44-2) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../026-libdeflate0_1.22-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.22-1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../027-libjbig0_2.1-6.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-6.1+b2) ... Selecting previously unselected package liblerc4:amd64. Preparing to unpack .../028-liblerc4_4.0.0+ds-5_amd64.deb ... Unpacking liblerc4:amd64 (4.0.0+ds-5) ... Selecting previously unselected package libsharpyuv0:amd64. Preparing to unpack .../029-libsharpyuv0_1.4.0-0.1+b1_amd64.deb ... Unpacking libsharpyuv0:amd64 (1.4.0-0.1+b1) ... Selecting previously unselected package libwebp7:amd64. Preparing to unpack .../030-libwebp7_1.4.0-0.1+b1_amd64.deb ... Unpacking libwebp7:amd64 (1.4.0-0.1+b1) ... Selecting previously unselected package libtiff6:amd64. Preparing to unpack .../031-libtiff6_4.5.1+git230720-5_amd64.deb ... Unpacking libtiff6:amd64 (4.5.1+git230720-5) ... Selecting previously unselected package libgdk-pixbuf-2.0-0:amd64. 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Setting up libboost-date-time1.83-dev:amd64 (1.83.0-3.2) ... Setting up dbus (1.14.10-6) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up shared-mime-info (2.4-5+b1) ... Setting up libxinerama1:amd64 (2:1.1.4-3+b2) ... Setting up libboost-numpy-dev (1.83.0.2+b2) ... Setting up libxkbcommon-x11-0:amd64 (1.6.0-1+b2) ... Setting up libeigen3-dev (3.4.0-4) ... Setting up libgssapi-krb5-2:amd64 (1.21.3-3) ... Setting up libxrandr2:amd64 (2:1.5.4-1+b1) ... Setting up libssh2-1-dev:amd64 (1.11.1-1) ... Setting up libjs-sphinxdoc (7.4.7-4) ... Setting up libreadline8t64:amd64 (8.2-5) ... Setting up libssm-dev:amd64 (1.4.0-2+b3) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up libdrm2:amd64 (2.4.123-1) ... Setting up groff-base (1.23.0-5) ... Setting up libwayland-cursor0:amd64 (1.23.0-1+b1) ... Setting up xml-core (0.19) ... Setting up jq (1.7.1-3+b1) ... Setting up libxslt1.1:amd64 (1.1.35-1.1+b1) ... Setting up libpam-systemd:amd64 (256.7-3) ... Setting up libharfbuzz0b:amd64 (10.0.1-1) ... Setting up libgdk-pixbuf-2.0-0:amd64 (2.42.12+dfsg-1+b1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b2) ... Setting up libxss1:amd64 (1:1.2.3-1+b2) ... Setting up libfontconfig1:amd64 (2.15.0-1.1+b1) ... Setting up libsm6:amd64 (2:1.2.4-1) ... Setting up libfftw3-dev:amd64 (3.3.10-2) ... Setting up libavahi-client3:amd64 (0.8-13+b3) ... Setting up libboost-timer-dev:amd64 (1.83.0.2+b2) ... Setting up rsync (3.3.0-1) ... Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b2) ... Setting up libdrm-amdgpu1:amd64 (2.4.123-1) ... Setting up libboost-thread1.83-dev:amd64 (1.83.0-3.2) ... Setting up libgnutls28-dev:amd64 (3.8.6-2+b1) ... Setting up libinput10:amd64 (1.26.2-1) ... Setting up gtk-update-icon-cache (4.16.3+ds-2) ... Setting up libnghttp2-dev:amd64 (1.64.0-1) ... Setting up libibverbs1:amd64 (52.0-2+b1) ... Setting up fontconfig (2.15.0-1.1+b1) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.6-1+b2) ... Setting up libxcb1-dev:amd64 (1.17.0-2+b1) ... Setting up libxi6:amd64 (2:1.8.2-1) ... Setting up libcurl4t64:amd64 (8.10.1-2) ... Setting up libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Setting up libccp4-dev:amd64 (8.0.0-4) ... Setting up ibverbs-providers:amd64 (52.0-2+b1) ... Setting up libdrm-radeon1:amd64 (2.4.123-1) ... Setting up libxtst6:amd64 (2:1.2.3-1.1+b2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libtk8.6:amd64 (8.6.15-1) ... Setting up libxcursor1:amd64 (1:1.2.2-1+b1) ... Setting up libpango-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libdrm-intel1:amd64 (2.4.123-1) ... Setting up python3.12-tk (3.12.7-2) ... Setting up libx11-dev:amd64 (2:1.8.10-2) ... Setting up libcurl3t64-gnutls:amd64 (8.10.1-2) ... Setting up xfonts-utils (1:7.7+7) ... Setting up libhwloc-plugins:amd64 (2.11.2-1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink '/etc/systemd/system/timers.target.wants/man-db.timer' -> '/usr/lib/systemd/system/man-db.timer'. Setting up libcairo2:amd64 (1.18.2-2) ... Setting up python3.13-tk (3.13.0-1) ... Setting up dbus-user-session (1.14.10-6) ... Setting up libqt5core5t64:amd64 (5.15.15+dfsg-2) ... Setting up adwaita-icon-theme (47.0-2) ... update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode Setting up libnotify4:amd64 (0.8.3-1+b2) ... Setting up libatspi2.0-0t64:amd64 (2.54.0-1) ... Setting up libraqm0:amd64 (0.10.1-1+b2) ... Setting up librtmp-dev:amd64 (2.4+20151223.gitfa8646d.1-2+b5) ... Setting up libpmix2t64:amd64 (5.0.3-2+b1) ... Setting up libnsl2:amd64 (1.3.0-3+b3) ... Setting up libqt5sql5t64:amd64 (5.15.15+dfsg-2) ... Setting up librdmacm1t64:amd64 (52.0-2+b1) ... Setting up libcairo-gobject2:amd64 (1.18.2-2) ... Setting up libwxbase3.2-1t64:amd64 (3.2.6+dfsg-2) ... Setting up libpangoft2-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libhdf5-103-1t64:amd64 (1.10.10+repack-4) ... Setting up libcups2t64:amd64 (2.4.10-2) ... Setting up libhsakmt1:amd64 (6.1.2+ds-1) ... Setting up libboost-thread-dev:amd64 (1.83.0.2+b2) ... Setting up libpangocairo-1.0-0:amd64 (1.54.0+ds-3) ... Setting up libatk-bridge2.0-0t64:amd64 (2.54.0-1) ... Setting up libfabric1:amd64 (1.17.0-3.1) ... Setting up libhdf5-hl-100t64:amd64 (1.10.10+repack-4) ... Setting up mesa-libgallium:amd64 (24.2.6-1) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up libnetcdf19t64:amd64 (1:4.9.2-7) ... Setting up libqt5dbus5t64:amd64 (5.15.15+dfsg-2) ... Setting up libcbf1t64:amd64 (0.9.7+dfsg1-4) ... Setting up libpython3.12-stdlib:amd64 (3.12.7-2) ... Setting up libgbm1:amd64 (24.2.6-1) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3.12 (3.12.7-2) ... Setting up libhdf5-cpp-103-1t64:amd64 (1.10.10+repack-4) ... Setting up libgl1-mesa-dri:amd64 (24.2.6-1) ... Setting up libqt5network5t64:amd64 (5.15.15+dfsg-2) ... Setting up libhdf5-fortran-102t64:amd64 (1.10.10+repack-4) ... Setting up libqt5xml5t64:amd64 (5.15.15+dfsg-2) ... Setting up debhelper (13.20) ... Setting up dconf-service (0.40.0-4+b3) ... Setting up dh-exec (0.30) ... Setting up fonts-urw-base35 (20200910-8) ... Setting up libqt5test5t64:amd64 (5.15.15+dfsg-2) ... Setting up libpython3.12t64:amd64 (3.12.7-2) ... Setting up libegl-mesa0:amd64 (24.2.6-1) ... Setting up libcurl4-openssl-dev:amd64 (8.10.1-2) ... Setting up libhsa-runtime64-1:amd64 (6.1.2-2) ... Setting up libegl1:amd64 (1.7.0-1+b2) ... Setting up libhdf5-hl-cpp-100t64:amd64 (1.10.10+repack-4) ... Setting up libpython3-stdlib:amd64 (3.12.6-1) ... Setting up libglx-mesa0:amd64 (24.2.6-1) ... Setting up libglx0:amd64 (1.7.0-1+b2) ... Setting up dconf-gsettings-backend:amd64 (0.40.0-4+b3) ... Setting up libhdf5-hl-fortran-100t64:amd64 (1.10.10+repack-4) ... Setting up python3 (3.12.6-1) ... Setting up libpython3.12-dev:amd64 (3.12.7-2) ... Setting up python3-zipp (3.20.2-1) ... Setting up python3-freetype (2.5.1-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-wheel (0.44.0-2) ... Setting up python3-platformdirs (4.3.6-1) ... Setting up python3-psutil (5.9.8-2) ... Setting up python3-tz (2024.1-2) ... Setting up python3-natsort (8.0.2-2) ... Setting up python3-six (1.16.0-7) ... Setting up python3-pil:amd64 (10.4.0-1) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.1-1) ... Setting up libgl1:amd64 (1.7.0-1+b2) ... Setting up libamdhip64-5 (5.7.1-5) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2024.8.30+dfsg-1) ... Setting up python3-brotli (1.1.0-2+b5) ... Setting up python3-cycler (0.12.1-1) ... Setting up libhdf5-dev (1.10.10+repack-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3-pycbf (0.9.7+dfsg1-4) ... Setting up python3-kiwisolver (1.4.7-2) ... Setting up python3-idna (3.8-2) ... Setting up scons (4.8.1+dfsg-1) ... Setting up python3.12-dev (3.12.7-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-pip (24.3.1+dfsg-1) ... Setting up libglew2.2:amd64 (2.2.0-4+b2) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-pyqt5.sip (12.15.0-1) ... Setting up python3-lxml:amd64 (5.3.0-1) ... Setting up libglx-dev:amd64 (1.7.0-1+b2) ... Setting up python3-dateutil (2.9.0-3) ... Setting up python3-flexcache (0.3-2) ... Setting up python3-msgpack (1.0.3-3+b2) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up libgl-dev:amd64 (1.7.0-1+b2) ... Setting up python3-procrunner (2.3.3-2) ... Setting up libgtk-3-common (3.24.43-4) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.13.3-1) ... Setting up python3-attr (24.2.0-1) ... Setting up libucx0:amd64 (1.17.0+ds-3) ... Setting up libpython3-dev:amd64 (3.12.6-1) ... Setting up python3-cairo (1.26.1-2) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b4) ... Setting up python3-charset-normalizer (3.4.0-1) ... Setting up python3-pytest (8.3.3-1) ... Setting up python3-tqdm (4.66.5-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-ordered-set (4.1.0-1) ... Setting up python3-tk:amd64 (3.12.6-1) ... Setting up python3-opengl (3.1.7+dfsg-1) ... /usr/lib/python3/dist-packages/OpenGL/GL/AMD/vertex_shader_tessellator.py:1: SyntaxWarning: invalid escape sequence '\ ' '''OpenGL extension AMD.vertex_shader_tessellator Setting up pybind11-dev (2.13.6-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up libqt5gui5t64:amd64 (5.15.15+dfsg-2) ... Setting up python3-flexparser (0.3.1-2) ... Setting up python3-pil.imagetk:amd64 (10.4.0-1) ... Setting up python3-rlpycairo (0.3.0-3) ... Setting up libpython3-all-dev:amd64 (3.12.6-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up libcbf-dev:amd64 (0.9.7+dfsg1-4) ... Setting up python3-dev (3.12.6-1) ... Setting up libgtk-3-0t64:amd64 (3.24.43-4) ... Setting up libboost-python1.83-dev (1.83.0-3.2) ... Setting up libglu1-mesa-dev:amd64 (9.0.2-1.1+b2) ... Setting up libopenmpi3t64:amd64 (5.0.5-3) ... Setting up libwxgtk3.2-1t64:amd64 (3.2.6+dfsg-2) ... Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-all-dev (3.12.6-1) ... Setting up libwxgtk-gl3.2-1t64:amd64 (3.2.6+dfsg-2) ... Setting up python3-setuptools (75.2.0-1) ... Setting up libqt5widgets5t64:amd64 (5.15.15+dfsg-2) ... Setting up python3-wxgtk4.0 (4.2.2+dfsg-1) ... Setting up sfftw2 (2.1.5-7) ... Setting up libqt5help5:amd64 (5.15.15-2) ... Setting up libboost-python-dev (1.83.0.2+b2) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pint (0.24.3-2) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up fftw2 (2.1.5-7) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up sfftw-dev (2.1.5-7) ... Setting up libclipper2:amd64 (2.1.20201109-2+b3) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-reportlab (4.2.5-1) ... Setting up python3-contourpy (1.3.0-2) ... Setting up libqt5opengl5t64:amd64 (5.15.15+dfsg-2) ... Setting up fftw-dev (2.1.5-7) ... Setting up libqt5printsupport5t64:amd64 (5.15.15+dfsg-2) ... Setting up python3-mrcfile (1.5.3-3) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-5) ... Setting up libqt5designer5:amd64 (5.15.15-2) ... Setting up python3-h5py-serial (3.11.0-7) ... Setting up libclipper-dev:amd64 (2.1.20201109-2+b3) ... Setting up python3-h5py (3.11.0-7) ... Setting up python3-hdf5plugin (4.0.1-3) ... Setting up python3-nxmx (0.0.3-3) ... Setting up python3-pyqt5 (5.15.11+dfsg-1+b1) ... Setting up python3-pyqt5.qtopengl (5.15.11+dfsg-1+b1) ... Setting up python3-pymol (3.0.0+dfsg-1) ... Setting up python3-fonttools (4.54.1-4) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-matplotlib (3.8.3-3) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for systemd (256.7-3) ... Processing triggers for sgml-base (1.31) ... Setting up w3c-sgml-lib (1.3-3) ... Setting up python3-biopython (1.84+dfsg-4) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/456915/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/456915/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../cctbx_2024.8+ds2+~3.21.1+ds1-3_source.changes dpkg-buildpackage: info: source package cctbx dpkg-buildpackage: info: source version 2024.8+ds2+~3.21.1+ds1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Roland Mas dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' cp -f debian/setup.py setup.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources dh_auto_clean pybuild --clean -i python{version} -p 3.12 I: pybuild base:311: python3.12 setup.py clean running clean removing '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; find . -name __pycache__ -type d -exec rm -rf {} \; rm -f setup.py rm -rf annlib annlib_adaptbx rm -rf ccp4io ccp4io_adaptbx rm -rf gui_resources make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars debian/files rm -fr -- debian/libcctbx0/ debian/tmp/ debian/libcctbx-dev/ debian/python3-cctbx/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' cp -f debian/setup.py setup.py cp -r debian/annlib_adaptbx annlib_adaptbx mkdir annlib cp -r debian/ccp4io_adaptbx ccp4io_adaptbx mkdir ccp4io cp -r debian/gui_resources gui_resources # configure the cctbx python modules dh_auto_configure pybuild --configure -i python{version} -p 3.12 I: pybuild base:311: python3.12 setup.py config running config # configure dxtbx python modules dh_auto_configure --sourcedirectory=dxtbx pybuild --configure -i python{version} -p 3.12 --dir dxtbx I: pybuild base:311: python3.12 setup.py config Found 21 dxtbx dispatchers Found 139 Format classes running config # configure the cctbx libtbx build system dh_auto_configure -- -s custom --configure-args="mkdir -p {build_dir}_ && cd {build_dir}_ \ && {interpreter} /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" pybuild --configure -i python{version} -p 3.12 -s custom "--configure-args=mkdir -p {build_dir}_ && cd {build_dir}_ && {interpreter} /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io" I: pybuild base:311: mkdir -p '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_ && cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_ && python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/configure.py --build=debug --use_environment_flags --cxxstd=c++14 annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx annlib ccp4io Python: 3.12.7+ "/usr/bin/python3.12" Compiler: default Build mode: debug Warning level: 0 Precompiled Headers: False Static libraries: False Static exe: False Scan Boost headers: False Write full flex_fwd.h files: False Build Boost.Python extensions: True Define BOOST_PYTHON_NO_PY_SIGNATURES: False Define BOOST_PYTHON_BOOL_INT_STRICT: True Enable OpenMP if possible: False Boost threads enabled: True Enable CUDA: False Enable KOKKOS: False Use conda: False Use opt_resources if available: False Use environment flags: True Enable C++11: False CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 LDFLAGS = -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 command_version_suffix: None Relocatable paths anchored at: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_ Top-down list of all modules involved: wxtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/wxtbx" serialtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/serialtbx" rstbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx" spotfinder "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder" mmtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx" gltbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx" dxtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx" iotbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx" smtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx" ucif "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ucif" crys3d "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/crys3d" cctbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx" chiltbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/chiltbx" ccp4io+adaptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io" "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io_adaptbx" cbflib_adaptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx" annlib+adaptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib" "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx" scitbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx" fable "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable" cma_es "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cma_es" omptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/omptbx" boost+adaptbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost" "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx" tbxx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/tbxx" libtbx "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx" Creating files in build directory: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_" dispatcher_include_template.sh dispatcher_head.sh setpaths.sh setpaths.csh setpaths_all.sh setpaths_all.csh setpaths_debug.sh unsetpaths.sh setpaths_debug.csh unsetpaths.csh SConstruct Makefile run_tests.csh Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/crys3d/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/wxtbx/command_line" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/libtbx_refresh.py" Generating C++ header files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/boost_python" Using fable to convert scitbx/lbfgs.f Updating entry points for scitbx 1 entries for entry point pytest_randomly.random_seeder Obtaining file:///build/reproducible-path/cctbx-2024.8%2Bds2%2B~3.21.1%2Bds1/dxtbx Checking if build backend supports build_editable: started Checking if build backend supports build_editable: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Installing collected packages: dxtbx DEPRECATION: Legacy editable install of dxtbx==3.21.1 from file:///build/reproducible-path/cctbx-2024.8%2Bds2%2B~3.21.1%2Bds1/dxtbx (setup.py develop) is deprecated. pip 25.0 will enforce this behaviour change. A possible replacement is to add a pyproject.toml or enable --use-pep517, and use setuptools >= 64. If the resulting installation is not behaving as expected, try using --config-settings editable_mode=compat. Please consult the setuptools documentation for more information. Discussion can be found at https://github.com/pypa/pip/issues/11457 Running setup.py develop for dxtbx Successfully installed dxtbx Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/cctbx/eltbx" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/cctbx/boost_python" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/crys3d/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/smtbx/boost_python" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/libtbx_refresh.py" Using fable to convert iotbx/pdb/hybrid_36_f.f Writing: iotbx/pdb/hybrid_36_fem.cpp Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/libtbx_refresh.py" Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/libtbx_refresh.py" Generating C++ files in: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/gltbx" fonts: 8x13 9x15 10x20 /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() Processing: "/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/libtbx_refresh.py" Done. make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' # build the python modules dh_auto_build pybuild --build -i python{version} -p 3.12 I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx copying cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/glu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/gl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx copying gltbx/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/tokenization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable copying fable/equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es copying cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es copying cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es copying cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es copying cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website copying cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx copying cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx copying boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx copying mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx copying scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/fastentrypoints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/subversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/configure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/progress.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/log.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx copying libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx copying wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx copying rstbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx copying rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx copying rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fast_linalg copying fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fast_linalg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx copying simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx copying simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx copying serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx copying qttbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx copying qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx copying iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx copying omptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx copying omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx copying cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder copying spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/conftest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx copying smtbx/development.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx copying fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line copying gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line copying gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line copying fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview copying crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line copying crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs copying crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs copying crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx copying crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression copying crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer copying crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src copying crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line copying cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line copying cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression copying cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line copying cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost copying boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line copying boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph copying boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues copying mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure copying mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent copying mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci copying mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens copying mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/tst_standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb copying mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions copying mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils copying mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks copying mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik copying mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement copying mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage copying mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent copying mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model copying mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line copying mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs copying mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias copying mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias copying mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr copying mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr copying mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry copying mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation copying mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space copying mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space copying mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building copying mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library copying mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename copying mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling copying mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands copying mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps copying mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model copying mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den copying mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components copying mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/alignment copying mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/alignment creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon copying mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder copying mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library copying mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors copying mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics copying mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls copying mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning copying mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer copying mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression copying mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe copying mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints copying mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa copying mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction copying mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs copying mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification copying mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification copying mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce copying mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer copying mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build copying mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm copying mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement copying mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space copying mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity copying mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression copying mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran copying mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands copying mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure copying mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model copying mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls copying mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs copying mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints copying mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize copying mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos copying xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal copying xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal copying xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel copying xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel copying xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util copying xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line copying xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx copying xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc copying xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api copying xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo copying xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation copying xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering copying xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui copying xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui copying xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology copying xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell copying xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi copying xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging copying xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp copying xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector copying xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana copying xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line copying xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line copying xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db copying xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components copying xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs copying xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale copying xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line copying xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line copying xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line copying xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana copying xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering copying xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx copying xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application copying xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line copying xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms copying xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/model copying xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database copying xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report copying xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify copying xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input copying xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate copying xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils copying xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference copying xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference copying xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference copying xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata copying xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation copying xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation copying xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group copying xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale copying xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics copying xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil copying xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil copying xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model copying xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor copying xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus copying xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance copying xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine copying xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge copying xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors copying xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter copying xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output copying xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output copying xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model copying xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics copying xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine copying xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/tables copying xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/tables creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs copying xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/sparse copying scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/sparse creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix copying scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix copying scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl copying scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/boost_python copying scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs copying scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils copying scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils copying scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface copying scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface copying scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx copying scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/glmtbx copying scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/glmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/random copying scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/random creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/spe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/farey.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math copying scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph copying scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body copying scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body copying scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stdlib copying scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stdlib creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family copying scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples copying scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg copying scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils copying scitbx/python_utils/random_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner copying scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner copying scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree copying scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree copying scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators copying scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin copying scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests copying scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests copying scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/boost_python copying scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto copying scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence copying scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington copying scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington copying scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family copying scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build copying libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle copying libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line copying libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil copying libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling copying libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils copying libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server copying libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development copying libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx copying libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils copying libtbx/test_utils/pytest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils copying libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing copying libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports copying wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line copying wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots copying wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls copying wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft copying cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft copying cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering copying cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering copying cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math copying cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions copying cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer copying rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps copying rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry copying rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage copying rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer copying rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass copying rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass copying rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line copying rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors copying rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors copying rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core copying rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core copying rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx copying rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation copying rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api copying rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil copying rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons copying rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core copying rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support copying rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing copying rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx copying rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction copying rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots copying rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots copying rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family copying rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family copying rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills copying rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints copying rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model copying rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg copying rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu copying simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg copying simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg copying simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos copying simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos copying simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling copying simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/pixel copying simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/pixel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners copying simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems copying simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util copying serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation copying serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector copying serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology copying serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers copying qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers copying qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz copying iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve copying iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek copying iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map copying iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint copying iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif copying iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line copying iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs copying iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics copying iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors copying iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor copying iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack copying iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof copying iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber copying iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx copying iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds copying iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns copying iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6 copying iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6 copying iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6 creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools copying iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile copying iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile copying iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression copying iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples copying iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb copying iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager copying iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ncs copying iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util copying iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util copying iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context copying iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs copying iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation copying iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster copying prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster copying prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line copying prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity copying prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine copying prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz copying cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx copying cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal copying cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/masks copying cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller copying cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx copying cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line copying cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx copying cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry copying cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web copying cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints copying cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray copying cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol copying cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol copying cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/covariance copying cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/covariance creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx copying cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/neutron copying cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/neutron creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family copying cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family copying cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression copying cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples copying cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging copying cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging copying cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development copying cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators copying cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators copying cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints copying cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu copying cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto copying cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development copying cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering copying cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr copying cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery copying cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets copying cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors copying cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations copying cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations copying cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell copying cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus copying cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging copying cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa copying cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx copying cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications copying spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox copying spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line copying spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers copying spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox copying spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction copying spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family copying spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family copying spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support copying spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support copying spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel copying spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx copying spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/masks copying smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement copying smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl copying smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl copying smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line copying smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio copying smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio copying smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/absolute_structure copying smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/absolute_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors copying smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/array_family copying smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression copying smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators copying smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators copying smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints copying smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints copying smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_disorder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_direction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests copying smtbx/refinement/constraints/tests/test_same_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical copying smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests copying smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct copying smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/test_data copying smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/test_data # build the dxtbx python module dh_auto_build --sourcedirectory=dxtbx pybuild --build -i python{version} -p 3.12 --dir dxtbx I: pybuild base:311: /usr/bin/python3 setup.py build Found 21 dxtbx dispatchers Found 139 Format classes running build running build_py creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize copying src/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util copying src/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/nexus copying src/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/nexus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data copying src/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line copying src/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs copying src/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/py.typed -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx copying src/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family copying src/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python copying src/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example copying src/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format copying src/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python copying src/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking copying src/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python copying src/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python copying src/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data copying src/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model copying src/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python copying src/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python # build the cctbx extensions and libraries dh_auto_build -- -s custom --build-args="cd {build_dir}_ && ./bin/libtbx.scons -j 42 " pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cd {build_dir}_ && ./bin/libtbx.scons -j 42 " I: pybuild base:311: cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_ && ./bin/libtbx.scons -j 42 scons: Reading SConscript files ... /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/libtbx/SConscript:1414: SyntaxWarning: invalid escape sequence '\.' cuda_version = re.findall('release [0-9]+\.*[0-9]+', line) libtbx.scons: using flags from initial environment: CXXFLAGS = -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 CFLAGS = -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 LDFLAGS = -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 libtbx.scons: OpenMP is disabled. BOOST_PYTHON_LIB_VERSION: boost_python312 BOOST_NUMPY_LIB_VERSION: boost_numpy312 BOOST_VERSION: 108300 Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cbflib.tst_memory' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.getting_started' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.sym_equiv_sites' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.convert_ccp4_symop_lib' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.lattice_symmetry' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.find_distances' Ignored: [Errno 2] No such file or directory: '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/exe_dev/cctbx.sys_abs_equiv_space_groups' scons: done reading SConscript files. scons: Building targets ... g++ -o annlib_adaptbx/ann/ann_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -Iannlib_adaptbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/src -Iannlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/ann/ann_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o annlib_adaptbx/ann/boost_python/annlib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/usr/include/python3.12 -Iannlib_adaptbx/ann/boost_python/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/ann/boost_python/src -Iannlib_adaptbx/ann/boost_python/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/ann/boost_python/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/ann/boost_python/annlib_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/blobs_cmd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/blobs_cmd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/asymmetric_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/asymmetric_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/skeletons.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/skeletons.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/dijkstra.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/dijkstra.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/xplor/map_reader.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/xplor/map_reader.cpp g++ -o iotbx/xplor/map_writer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/xplor/map_writer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/cut.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/cut.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/reference_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/reference_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/basic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/basic.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/it1992.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering/it1992.cpp g++ -o cctbx/eltbx/xray_scattering/wk1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering/wk1995.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/n_gaussian_raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering/n_gaussian_raw.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/xray_scattering/n_gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering/n_gaussian.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/fp_fdp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/fp_fdp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_01_12.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_13_24.cpp g++ -o cctbx/eltbx/henke_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_25_36.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_37_48.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_49_60.cpp g++ -o cctbx/eltbx/henke_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_61_72.cpp g++ -o cctbx/eltbx/henke_tables_73_84.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_73_84.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/henke_tables_85_92.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/henke_tables_85_92.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/icsd_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/icsd_radii.cpp g++ -o cctbx/eltbx/covalent_radii.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/covalent_radii.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/neutron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/neutron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_01_12.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_01_12.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_13_24.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_13_24.cpp g++ -o cctbx/eltbx/sasaki_tables_25_36.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_25_36.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_37_48.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_37_48.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_49_60.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_49_60.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_61_72.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_61_72.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/sasaki_tables_73_82.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include cctbx/eltbx/sasaki_tables_73_82.cpp g++ -o cctbx/eltbx/tiny_pse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/tiny_pse.cpp g++ -o cctbx/eltbx/wavelengths.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/wavelengths.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/electron_scattering/peng1996.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/electron_scattering/peng1996.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/attenuation_coefficient.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/attenuation_coefficient.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/asu.cpp g++ -o cctbx/miller/bins.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/bins.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/index_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/index_span.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_bijvoet_mates.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_multi_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/sym_equiv.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/bricks.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/bricks.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/change_of_basis_op.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/find_affine.cpp g++ -o cctbx/sgtbx/group_codes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/group_codes.cpp g++ -o cctbx/sgtbx/hall_in.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/hall_in.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/lattice_tr.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/lattice_tr.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/miller.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/miller.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reciprocal_space_asu.cpp g++ -o cctbx/sgtbx/reciprocal_space_ref_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reciprocal_space_ref_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rot_mx_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx_info.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/row_echelon_solve.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/row_echelon_solve.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/select_generators.cpp g++ -o cctbx/sgtbx/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/seminvariant.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/space_group_type.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group_type.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/symbols.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/symbols.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensor_rank_2.cpp g++ -o cctbx/sgtbx/tr_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/tr_vec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_vec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/hall_symbol_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reference_settings/hall_symbol_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/matrix_group_code_table.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reference_settings/matrix_group_code_table.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/normalizer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reference_settings/normalizer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/reference_settings/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/reference_settings/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/uctbx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/uctbx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/spoil_optimization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/spoil_optimization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/crystal_orientation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/crystal_orientation.cpp g++ -o omptbx/stubs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/omptbx/stubs.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/breadth_first_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libiotbx_xplor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_xplor.so.0 iotbx/xplor/map_reader.o iotbx/xplor/map_writer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm Create symlinks for: 'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so.0'->'lib/libiotbx_xplor.so.0.0.1' 'lib/libiotbx_xplor.so'->'lib/libiotbx_xplor.so.0.0.1' g++ -o boost_adaptbx/graph/clustering_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libomptbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libomptbx.so.0 omptbx/stubs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o boost_adaptbx/graph/connected_component_algorithm_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/graph_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/graph_structure_comparison_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_structure_comparison_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/maximum_clique_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so.0'->'lib/libomptbx.so.0.0.1' 'lib/libomptbx.so'->'lib/libomptbx.so.0.0.1' g++ -o boost_adaptbx/graph/metric_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/metric_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/min_cut_max_flow_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/graph/utility_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/utility_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/hybrid_times_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/hybrid_times_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/meta_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/meta_ext.cpp g++ -o boost_adaptbx/optional_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/optional_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/rational_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/rational_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/std_pair_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/std_pair_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/boost_thread_test.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/tests/boost_thread_test.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tests/python_streambuf_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/tests/python_streambuf_test_ext.cpp g++ -o boost_adaptbx/tests/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/tests/tst_optional_copy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o boost_adaptbx/tuple_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/tuple_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DSWIG_PYTHON_STRICT_BYTE_CHAR -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/boost_python/cbflib_ext.cpp g++ -o cbflib_adaptbx/detectors/buffer_based_service.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/buffer_based_service.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/cbf_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/cbf_adaptor.cpp g++ -o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/cbf_byte_offset_optimized.cpp g++ -o cbflib_adaptbx/detectors/mar_adaptor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include/hdf5/serial -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/mar_adaptor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cbflib_adaptbx/detectors/tst_memory.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DCBF_NO_REGEX -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx/detectors/tst_memory.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o ccp4io_adaptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io_adaptbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ gcc -o ccp4io_adaptbx/fortran_call_stubs.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io_adaptbx/fortran_call_stubs.c gcc -o ccp4io_adaptbx/printf_wrappers.o -c -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io -I. -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ccp4io_adaptbx/printf_wrappers.c g++ -o cctbx/adp_restraints/adp_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/adp_restraints_bpl.cpp g++ -o cctbx/adp_restraints/adp_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/adp_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/adp_similarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/adp_similarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/aniso_restraints_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/aniso_restraints_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/fixed_u_eq_adp_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/isotropic_adp_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/isotropic_adp_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/rigid_bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/rigid_bond_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adp_restraints/rigu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adp_restraints/rigu_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/adptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adptbx/boost_python/adptbx_ext.cpp g++ -o boost_adaptbx/tests/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread boost_adaptbx/tests/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/anharmonic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adptbx/boost_python/anharmonic_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/adptbx/boost_python/hirshfeld.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/adptbx/boost_python/hirshfeld.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/array_family/boost_python/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_hendrickson_lattman.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/array_family/boost_python/flex_hendrickson_lattman.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_miller_index.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/array_family/boost_python/flex_miller_index.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/array_family/boost_python/flex_xray_scatterer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/array_family/boost_python/flex_xray_scatterer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/emma_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/boost_python/emma_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/french_wilson_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/boost_python/french_wilson_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/orientation_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/boost_python/orientation_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/boost_python/statistics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/boost_python/statistics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/covariance/boost_python/covariance_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/covariance/boost_python/covariance_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/asu_clusters_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/asu_clusters_bpl.cpp g++ -o lib/libcctbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcctbx.so.0 cctbx/eltbx/basic.o cctbx/eltbx/xray_scattering/it1992.o cctbx/eltbx/xray_scattering/wk1995.o cctbx/eltbx/xray_scattering/n_gaussian_raw.o cctbx/eltbx/xray_scattering/n_gaussian.o cctbx/eltbx/fp_fdp.o cctbx/eltbx/henke.o cctbx/eltbx/henke_tables_01_12.o cctbx/eltbx/henke_tables_13_24.o cctbx/eltbx/henke_tables_25_36.o cctbx/eltbx/henke_tables_37_48.o cctbx/eltbx/henke_tables_49_60.o cctbx/eltbx/henke_tables_61_72.o cctbx/eltbx/henke_tables_73_84.o cctbx/eltbx/henke_tables_85_92.o cctbx/eltbx/icsd_radii.o cctbx/eltbx/covalent_radii.o cctbx/eltbx/neutron.o cctbx/eltbx/sasaki.o cctbx/eltbx/sasaki_tables_01_12.o cctbx/eltbx/sasaki_tables_13_24.o cctbx/eltbx/sasaki_tables_25_36.o cctbx/eltbx/sasaki_tables_37_48.o cctbx/eltbx/sasaki_tables_49_60.o cctbx/eltbx/sasaki_tables_61_72.o cctbx/eltbx/sasaki_tables_73_82.o cctbx/eltbx/tiny_pse.o cctbx/eltbx/wavelengths.o cctbx/eltbx/electron_scattering/peng1996.o cctbx/eltbx/attenuation_coefficient.o cctbx/miller/asu.o cctbx/miller/bins.o cctbx/miller/index_generator.o cctbx/miller/index_span.o cctbx/miller/match_bijvoet_mates.o cctbx/miller/match_indices.o cctbx/miller/match_multi_indices.o cctbx/miller/sym_equiv.o cctbx/sgtbx/bricks.o cctbx/sgtbx/change_of_basis_op.o cctbx/sgtbx/find_affine.o cctbx/sgtbx/group_codes.o cctbx/sgtbx/hall_in.o cctbx/sgtbx/lattice_tr.o cctbx/sgtbx/lattice_symmetry.o cctbx/sgtbx/miller.o cctbx/sgtbx/reciprocal_space_asu.o cctbx/sgtbx/reciprocal_space_ref_asu.o cctbx/sgtbx/rot_mx.o cctbx/sgtbx/rot_mx_info.o cctbx/sgtbx/row_echelon_solve.o cctbx/sgtbx/rt_mx.o cctbx/sgtbx/select_generators.o cctbx/sgtbx/seminvariant.o cctbx/sgtbx/site_symmetry.o cctbx/sgtbx/space_group.o cctbx/sgtbx/space_group_type.o cctbx/sgtbx/symbols.o cctbx/sgtbx/tensor_rank_2.o cctbx/sgtbx/tr_group.o cctbx/sgtbx/tr_vec.o cctbx/sgtbx/utils.o cctbx/sgtbx/wyckoff.o cctbx/sgtbx/reference_settings/hall_symbol_table.o cctbx/sgtbx/reference_settings/matrix_group_code_table.o cctbx/sgtbx/reference_settings/normalizer.o cctbx/sgtbx/reference_settings/wyckoff.o cctbx/uctbx/uctbx.o cctbx/uctbx/spoil_optimization.o cctbx/uctbx/crystal_orientation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/close_packing_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/close_packing_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so.0'->'lib/libcctbx.so.0.0.1' 'lib/libcctbx.so'->'lib/libcctbx.so.0.0.1' g++ -o cctbx/crystal/coordination_sequences_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/coordination_sequences_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/crystal_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/crystal_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/direct_space_asu_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/incremental_pairs_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/incremental_pairs_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/neighbors_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/neighbors_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/crystal/pair_tables_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/pair_tables_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_structure_comparison_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/connected_component_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o cctbx/crystal/site_cluster_analysis_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/site_cluster_analysis_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/maximum_clique_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/breadth_first_search_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o cctbx/crystal/symmetry_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/symmetry_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/utility_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/clustering_algorithm_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/metric_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/graph_type.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/boost_adaptbx/graph/min_cut_max_flow_ext.cpp:1: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o cctbx/dmtbx/boost_python/dmtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/dmtbx/boost_python/dmtbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/triplet_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/dmtbx/boost_python/triplet_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/dmtbx/boost_python/triplet_phase_relation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/dmtbx/boost_python/triplet_phase_relation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/attenuation_coefficient_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/chemical_elements_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/chemical_elements_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/covalent_radii_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/covalent_radii_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/fp_fdp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/fp_fdp_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/henke_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/henke_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/icsd_radii_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/icsd_radii_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/neutron_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/neutron_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/sasaki_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/sasaki_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/tiny_pse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/tiny_pse_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/wavelengths_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/wavelengths_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/eltbx/boost_python/xray_scattering_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/boost_python/xray_scattering_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/convert_ccp4_symop_lib.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/convert_ccp4_symop_lib.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/find_distances.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/find_distances.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/getting_started.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/getting_started.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/sym_equiv_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/sym_equiv_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/examples/sys_abs_equiv_space_groups.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Icctbx/examples -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/examples/sys_abs_equiv_space_groups.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry/boost_python/geometry_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry/boost_python/geometry_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/angle_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_similarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/bond_sorted_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/chirality_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/dihedral_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/geometry_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/geometry_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/motif_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/motif_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/nonbonded_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/nonbonded_sorted_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_sorted_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/parallelity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/geometry_restraints/planarity_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/planarity_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/asymmetric_map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/asymmetric_map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/bcr/bcr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/bcr/bcr_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/coordinate_transformers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/coordinate_transformers.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/grid_indices_around_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/grid_indices_around_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/grid_tags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/grid_tags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/gridding.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/gridding.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/maptbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/maptbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/misc.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/misc.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/peak_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/peak_search.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/pymol_interface.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/pymol_interface.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/maptbx/boost_python/statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/statistics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/chirality.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/maptbx/boost_python/structure_factors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/maptbx/boost_python/structure_factors.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::chirality_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/chirality_bpl.cpp:75:60: required from here 75 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 76 | "shared_chirality_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:12: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::angle_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle_bpl.cpp:75:65: required from here 75 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 76 | "shared_angle_proxy") | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/proxy_select.h: In instantiation of ‘scitbx::af::shared cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = dihedral_proxy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:110:17: required from here 110 | shared_proxy_remove, ( | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity.h: In constructor ‘cctbx::geometry_restraints::bond_similarity::bond_similarity(const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity.h:84:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 84 | for(int i=0;i, scitbx::af::trivial_accessor>&, const cctbx::geometry_restraints::bond_similarity_proxy&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity.h:108:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 108 | for(int i=0;i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/masks/boost_python/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/masks/boost_python/masks_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_misc.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:14: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::dihedral_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral_bpl.cpp:84:65: required from here 84 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 85 | "shared_dihedral_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/math/boost_python/math_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/math/time_trigonometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/math/time_trigonometry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_similarity_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:55:44: required from here 54 | scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | bond_similarity_proxy, rir>::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 56 | "shared_bond_similarity_proxy"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared, 2> >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny, 2>; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_similarity_bpl.cpp:79:54: required from here 78 | scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 | af::tiny, 2>, rbv>::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 80 | "sites_array"); | ~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o cctbx/merging/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/merging/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_sorted.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_sorted_bpl.cpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::map; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:129:23: required from here 129 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 130 | "bond_params_table") | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:232:25: required from here 232 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 233 | "shared_bond_simple_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::bond_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_bpl.cpp:340:25: required from here 340 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 341 | "shared_bond_asu_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::parallelity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/parallelity_bpl.cpp:82:60: required from here 82 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 83 | "shared_parallelity_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/planarity_bpl.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::planarity_proxy; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/planarity_bpl.cpp:62:23: required from here 62 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 63 | "shared_planarity_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:92:25: required from here 92 | shared_w_t::wrap("shared_nonbonded_simple_proxy") | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::geometry_restraints::nonbonded_asu_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_bpl.cpp:125:25: required from here 125 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 126 | "shared_nonbonded_asu_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/math/time_trigonometry -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/math/time_trigonometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_timer -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h: In instantiation of ‘int cctbx::crystal::direct_space_asu::asu_mappings::find_i_sym(unsigned int, const cctbx::sgtbx::rt_mx&) const [with FloatType = double; IntShiftType = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/pair_tables.h:643:46: required from ‘bool cctbx::crystal::pair_asu_table::process_pair(unsigned int, unsigned int, const cctbx::sgtbx::rt_mx&) [with FloatType = double; IntShiftType = int]’ 643 | int j_sym = asu_mappings_->find_i_sym(j_seq, rt_mx_j); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/pair_tables.h:543:35: required from ‘cctbx::crystal::pair_asu_table& cctbx::crystal::pair_asu_table::add_pair(const scitbx::af::tiny&) [with FloatType = double; IntShiftType = int]’ 543 | bool is_new = process_pair(i_seqs[0], i_seqs[1], rt_mx_ji); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond_sorted.h:16:30: required from here 16 | pair_asu_table.add_pair(bond_simple_proxies[i].i_seqs); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:859:33: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 859 | for(int i_sym=0; i_sym, std::allocator > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 869 | for(int i_sym=0; i_sym::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/neighbors_fast.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/pair_tables.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = cctbx::cartesian; CubicleContentType = std::vector; FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/neighbors_fast.h:77:34: required from ‘cctbx::crystal::neighbors::fast_pair_generator::fast_pair_generator(const boost::shared_ptr >&, const FloatType&, bool, const FloatType&, const FloatType&) [with FloatType = double; IntShiftType = int]’ 77 | cubicles_.i_cubicle(mappings[mi.i_seq][mi.i_sym].mapped_site())); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/nonbonded_sorted.h:80:27: required from here 80 | min_cubicle_edge); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/miller/boost_python/f_calc_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/f_calc_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/index_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/index_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/index_span.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/index_span.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/lookup_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/lookup_utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_bijvoet_mates.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/match_bijvoet_mates.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/match_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/match_multi_indices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/match_multi_indices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/merge_equivalents.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/merge_equivalents.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/miller_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/miller_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/phase_integrator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/phase_integrator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/phase_transfer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/phase_transfer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/tuple.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/shared_wrapper_pickle.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/angle_bpl.cpp:2: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o cctbx/miller/boost_python/randomize_amplitude_and_phase.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/randomize_amplitude_and_phase.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/slices.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/slices.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/miller/boost_python/sym_equiv.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/boost_python/sym_equiv.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/multipolar/aspherical_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/multipolar/aspherical_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/brick.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/brick.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/change_of_basis.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/change_of_basis.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/find_affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/find_affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/lattice_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/lattice_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/phase_info.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/phase_info.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/reciprocal_space_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/reciprocal_space_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/rot_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/rot_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/rt_mx.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/rt_mx.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/search_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/search_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/select_generators.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/select_generators.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/seminvariant.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/seminvariant.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/sgtbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/sgtbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/site_symmetry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/site_symmetry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/space_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/space_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/space_group_type.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/space_group_type.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/sym_equiv_sites.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/sym_equiv_sites.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/symbols.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/symbols.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/tensor_rank_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tensors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/tensors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/tr_vec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/tr_vec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/boost_python/wyckoff.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/boost_python/wyckoff.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/asu_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/symmetry_search/boost_python/symmetry_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/symmetry_search/boost_python/symmetry_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/fast_nv1995.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/translation_search/boost_python/fast_nv1995.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/fast_terms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/translation_search/boost_python/fast_terms.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/symmetry_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/translation_search/boost_python/symmetry_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/translation_search/boost_python/translation_search_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/translation_search/boost_python/translation_search_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/boost_python/fast_minimum_reduction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/boost_python/fast_minimum_reduction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/boost_python/uctbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/boost_python/uctbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/uctbx/determine_unit_cell/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_SINGLEFILE_NCDIST -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx/determine_unit_cell/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/conversions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/conversions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/curvatures_simple.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/curvatures_simple.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/each_hkl_gradients_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/extinction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/extinction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/f_model_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/f_model_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/fast_gradients.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/fast_gradients.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/gradient_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/gradient_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/gradients_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/gradients_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/grouped_data.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/minimization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/minimization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/parameter_map.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/parameter_map.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/sampled_model_density.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sampled_model_density.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/sampling_base.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sampling_base.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/scatterer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/scatterer_flags.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o cctbx/xray/boost_python/scattering_type_registry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/gradients_direct.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/each_hkl_gradients_direct.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/each_hkl_gradients_direct.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/structure_factors_direct.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/fast_gradients.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/fast_gradients.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/gradients_direct.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/gradients_direct.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/twin_components.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_components.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/boost_python/xray_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/xray_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sampled_model_density.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sampled_model_density.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/xray/observations/boost_python/observations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/observations/boost_python/observations.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/parameter_map.h: In instantiation of ‘void cctbx::xray::parameter_map::init_scatterer_part(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/parameter_map.h:54:7: required from ‘cctbx::xray::parameter_map::parameter_map(const scitbx::af::const_ref&) [with XRayScattererType = cctbx::xray::scatterer<>]’ 54 | init_scatterer_part(scatterers); | ^~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0) [with A0 = boost::python::objects::reference_to_value, scitbx::af::trivial_accessor>&>; Value = cctbx::xray::parameter_map >; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<1>::apply::execute(PyObject*, t0) [with Holder = boost::python::objects::value_holder > >; ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; PyObject = _object; t0 = const scitbx::af::const_ref, scitbx::af::trivial_accessor>&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector1, scitbx::af::trivial_accessor>&>; Arity = boost::mpl::size, scitbx::af::trivial_accessor>&> >; Holder = boost::python::objects::value_holder > >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::trivial_accessor>&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = cctbx::xray::parameter_map >; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:46:11: required from ‘static void cctbx::xray::boost_python::parameter_map_wrapper::wrap(const char*) [with XRayScattererType = cctbx::xray::scatterer<>]’ 45 | class_("parameter_map", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 | .def(init const &>(( | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 | arg("scatterers")))) | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/parameter_map.cpp:60:50: required from here 60 | parameter_map_wrapper >::wrap("parameter_map"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/parameter_map.h:61:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for(int i_sc=0; i_sc < scatterers.size(); ++i_sc) { | ~~~~~^~~~~~~~~~~~~~~~~~~ g++ -o cctbx/xray/observations/boost_python/observations_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/observations/boost_python/observations_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/minimization.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/minimization.cpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/f_model.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/f_model_bpl.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/f_model.h:4: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o cctbx/xray/targets/shelxl_wght_ls_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/f_model.h: In instantiation of ‘cctbx::xray::f_model_core_data::f_model_core_data cctbx::xray::f_model_core_data::f_model_core_data::select(const scitbx::af::const_ref&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/f_model_bpl.cpp:174:32: required from here 174 | .def("select", &w_t::select) | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/f_model.h:732:38: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 732 | CCTBX_ASSERT( iselection[ii] struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:4: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sampling_base.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sampling_base.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::bic() [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here 68 | .def("bic", &w_t::bic) | ^~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:257:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 257 | for (long int ii=0;ii::r_abs() [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:69:31: required from here 69 | .def("r_abs", &w_t::r_abs) | ^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:271:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 271 | for (long int ii=0;ii cctbx::xray::grouped_data::merger::combine_obs(long int) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:258:24: required from ‘FloatType cctbx::xray::grouped_data::merger::bic() [with FloatType = double]’ 258 | tmp_result = combine_obs( ii ); | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:68:29: required from here 68 | .def("bic", &w_t::bic) | ^~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:213:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 213 | for (int ii=1;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int ii=1;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::unmerged_data(scitbx::af::const_ref >, scitbx::af::const_ref >, const cctbx::sgtbx::space_group&, const bool&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::unmerged_data; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<4>::apply::execute(PyObject*, t0, t1, t2, t3) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector4 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&>; W = cctbx::xray::grouped_data::unmerged_data; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:27:15: required from here 26 | class_("unmerged_data", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 27 | .def(init< scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 28 | scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 | sgtbx::space_group const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | bool const& | ~~~~~~~~~~~ 31 | > | ~ 32 | (( arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~~ 33 | arg("asu_hkl"), | ~~~~~~~~~~~~~~~ 34 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 35 | arg("anomalous_flag") ))) | ~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:54:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 54 | for (int ii=0;ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 61 | for (int ii=0; ii >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:67:11: note: in expansion of macro ‘CCTBX_ASSERT’ 67 | CCTBX_ASSERT( tmp_index < asu_hkl.size() ); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h: In instantiation of ‘cctbx::xray::grouped_data::merger::merger(scitbx::af::const_ref >, scitbx::af::const_ref, scitbx::af::const_ref, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = cctbx::xray::grouped_data::merger; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref&; t2 = const scitbx::af::const_ref&; t3 = const cctbx::sgtbx::space_group&; t4 = const bool&; t5 = const cctbx::uctbx::unit_cell&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector6 >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const cctbx::sgtbx::space_group&, const bool&, const cctbx::uctbx::unit_cell&>; W = cctbx::xray::grouped_data::merger; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/grouped_data.cpp:54:15: required from here 53 | class_("merger", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 54 | .def(init< scitbx::af::const_ref< cctbx::miller::index<> > const&, | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 55 | scitbx::af::const_ref< double > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 | scitbx::af::const_ref< double > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 57 | sgtbx::space_group const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 58 | bool const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 | cctbx::uctbx::unit_cell const& | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 | > | ~ 61 | (( arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~~ 62 | arg("i_obs"), | ~~~~~~~~~~~~~ 63 | arg("s_obs"), | ~~~~~~~~~~~~~ 64 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 65 | arg("anomalous_flag"), | ~~~~~~~~~~~~~~~~~~~~~~ 66 | arg("unit_cell") | ~~~~~~~~~~~~~~~~ 67 | ))) | ~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/grouped_data.h:151:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 151 | for (int ii=0;ii::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 167 | for (int ii=0; ii::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o chiltbx/handle_test -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread chiltbx/handle_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system Create symlinks for: 'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so.0'->'lib/libcctbx_sgtbx_asu.so.0.0.1' 'lib/libcctbx_sgtbx_asu.so'->'lib/libcctbx_sgtbx_asu.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o cctbx/sgtbx/direct_space_asu/proto/tst_asu -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/sgtbx/direct_space_asu/proto/tst_asu.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/sigmaa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/sigmaa.cpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::henke::table]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer.cpp:349:54: required from here 349 | inelastic_form_factors::set, | ^~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_utils.h: In instantiation of ‘static void cctbx::xray::inelastic_form_factors::set(const scitbx::af::ref&, float, bool) [with ScattererType = cctbx::xray::scatterer<>; TableType = cctbx::eltbx::sasaki::table]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer.cpp:353:55: required from here 353 | inelastic_form_factors::set, | ^~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_utils.h:426:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 426 | for (int i=0; i < scatterers.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘unsigned int dxtbx::boost_python::cbf_decompress(const char*, std::size_t, int*, std::size_t)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:123:50: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 123 | while ((j < packed_sz) && ((values - original) < values_sz)) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc: In function ‘void dxtbx::boost_python::rod_TY6_decompress(int*, const char*, const char*, int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:203:26: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 203 | for (size_t iy = 0; iy < slow; iy++) { | ~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:224:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 224 | for (int k = 0; k < nblock; k++) { | ~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:250:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 250 | for (int j = 0; j < nbit; j++) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:257:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 257 | for (int j = 0; j < BLOCKSIZE; j++) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/compression.cc:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 278 | for (int i = 0; i < nrest; i++) { | ~~^~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/boost_python/flumpy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -fvisibility=hidden -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/structure_factors_direct.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/structure_factors_direct.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i'lib/libasymmetric_map.so.0.0.1' 'lib/libasymmetric_map.so'->'lib/libasymmetric_map.so.0.0.1' g++ -o bin/cctbx_blobs -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/maptbx/blobs_cmd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:49:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 49 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_flags.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:4: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp: In static member function ‘static std::auto_ptr cctbx::xray::boost_python::{anonymous}::scattering_type_registry_wrappers::constructor_for_pickle(const boost::python::dict&, const boost::python::list&, const cctbx::xray::scattering_type_registry::unique_counts_t&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scattering_type_registry.cpp:55:12: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 55 | std::auto_ptr self(new w_t); | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = cctbx::xray::scatterer_flags; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/scatterer_flags.cpp:142:44: required from here 140 | class_ wrapper = scitbx::af::boost_python::shared_wrapper< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | scatterer_flags, | ~~~~~~~~~~~~~~~~ 142 | return_internal_reference<> >::wrap("shared_scatterer_flags"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/structure_factors_simple.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/structure_factors_simple.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_components.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ 300 | tuple_mapping< | ^~~~~~~~~~~~~~ 301 | ContainerType, | ~~~~~~~~~~~~~~ 302 | variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_components.cpp:91:77: required from here 91 | tuple_mapping_variable_capacity *> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::shared*>; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:300:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_variable_capacity::tuple_mapping_variable_capacity() [with ContainerType = scitbx::af::shared*>]’ 300 | tuple_mapping< | ^~~~~~~~~~~~~~ 301 | ContainerType, | ~~~~~~~~~~~~~~ 302 | variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_components.cpp:92:78: required from here 92 | tuple_mapping_variable_capacity *> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/boost_python/imageset_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/uctbx.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_constraints.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:50:33: required from ‘scitbx::af::small::small(const OtherElementType*, const OtherElementType*) [with OtherElementType = float; ElementType = double; long unsigned int N = 10]’ 50 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/eltbx/xray_scattering.h:155:11: required from ‘cctbx::eltbx::xray_scattering::gaussian cctbx::eltbx::xray_scattering::base::fetch() const [with long unsigned int N = 4]’ 155 | small_t(entry_->a, entry_->a+N), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scattering_type_registry.h:192:40: required from here 191 | ugs[ui] = eltbx::xray_scattering::it1992( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 | pair->first, exact).fetch(); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:69:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 69 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/format/boost_python/image_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/nexus_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/masking/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/beam.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc g++ -o dxtbx/src/dxtbx/model/boost_python/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/detector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/experiment_list.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/model_ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/panel.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/parallax_correction.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match_indices.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/lookup_utils.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:14, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:16:34: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 16 | struct additive_sigma : std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/string:49, from /usr/include/c++/14/bits/locale_classes.h:40, from /usr/include/c++/14/bits/ios_base.h:41, from /usr/include/c++/14/ios:44, from /usr/include/c++/14/istream:40, from /usr/include/c++/14/sstream:40, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:4: /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:18:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 18 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:31:27: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 31 | struct average : std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/match.h:33:20: warning: ‘template struct std::binary_function’ is deprecated [-Wdeprecated-declarations] 33 | typedef std::binary_function base_type; | ^~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/targets/shelxl_wght_ls.hpp:1, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/targets/shelxl_wght_ls_bpl.cpp:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::shared cctbx::xray::twin_targets::twin_completion::get_free_model_selection(scitbx::af::const_ref >, const scitbx::af::const_ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:42:50: required from here 42 | .def("get_free_model_selection", &w_t::get_free_model_selection) | ^~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:128:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 128 | CCTBX_ASSERT( index < flags.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:128:11: note: in expansion of macro ‘CCTBX_ASSERT’ 128 | CCTBX_ASSERT( index < flags.size() ); | ^~~~~~~~~~~~ g++ -o dxtbx/src/dxtbx/model/boost_python/scan.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:182:39: required from here 182 | .def("r_intensity_abs", &w_t::r_intensity_abs, | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:559:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:559:6: note: in expansion of macro ‘CCTBX_ASSERT’ 559 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:560:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:560:6: note: in expansion of macro ‘CCTBX_ASSERT’ 560 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:561:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:561:6: note: in expansion of macro ‘CCTBX_ASSERT’ 561 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_intensity_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:189:38: required from here 189 | .def("r_intensity_sq", &w_t::r_intensity_sq, | ^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:604:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:604:6: note: in expansion of macro ‘CCTBX_ASSERT’ 604 | CCTBX_ASSERT( obs_size_ == i_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:605:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:605:6: note: in expansion of macro ‘CCTBX_ASSERT’ 605 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:606:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:606:6: note: in expansion of macro ‘CCTBX_ASSERT’ 606 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_abs(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:196:39: required from here 196 | .def("r_amplitude_abs", &w_t::r_amplitude_abs, | ^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:649:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:649:6: note: in expansion of macro ‘CCTBX_ASSERT’ 649 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:650:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:650:6: note: in expansion of macro ‘CCTBX_ASSERT’ 650 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:651:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:651:6: note: in expansion of macro ‘CCTBX_ASSERT’ 651 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘FloatType cctbx::xray::twin_targets::hemihedral_r_values::r_amplitude_sq(const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:203:38: required from here 203 | .def("r_amplitude_sq", &w_t::r_amplitude_sq, | ^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:697:30: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:697:6: note: in expansion of macro ‘CCTBX_ASSERT’ 697 | CCTBX_ASSERT( obs_size_ == f_obs.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:698:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:698:6: note: in expansion of macro ‘CCTBX_ASSERT’ 698 | CCTBX_ASSERT( calc_size_ == f_model.size() ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:699:31: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:699:6: note: in expansion of macro ‘CCTBX_ASSERT’ 699 | CCTBX_ASSERT( (obs_size_ == selection.size()) || (selection.size()==0) ); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref >&, const FloatType&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:263:45: required from here 263 | result = self.detwin_with_model_data(i_obs,sig_obs,f_model,twin_fraction); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:997:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:997:19: note: in expansion of macro ‘CCTBX_ASSERT’ 997 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1003:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1003:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1003 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1006:41: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1006:13: note: in expansion of macro ‘CCTBX_ASSERT’ 1006 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1010:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1010:19: note: in expansion of macro ‘CCTBX_ASSERT’ 1010 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘scitbx::af::tiny, 2> cctbx::xray::twin_targets::hemihedral_detwinner::detwin_with_model_data(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&, const FloatType&) const [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:275:45: required from here 275 | result = self.detwin_with_model_data(i_obs,sig_obs,f_model,twin_fraction); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:936:43: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:936:17: note: in expansion of macro ‘CCTBX_ASSERT’ 936 | CCTBX_ASSERT(i_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:942:47: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:942:19: note: in expansion of macro ‘CCTBX_ASSERT’ 942 | CCTBX_ASSERT(sig_obs.size() > loc_twin_obs); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:945:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:945:17: note: in expansion of macro ‘CCTBX_ASSERT’ 945 | CCTBX_ASSERT(f_model.size() > loc_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:948:45: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:948:17: note: in expansion of macro ‘CCTBX_ASSERT’ 948 | CCTBX_ASSERT(f_model.size() > loc_twin_calc); // XXX trap for long standing seg. fault bug | ^~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o dxtbx/src/dxtbx/model/boost_python/spectrum.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -isystem/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DBUILD_CBF -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/cbflib -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cbflib_adaptbx -I/usr/include/python3.12 -I/usr/include/hdf5/serial /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h: In instantiation of ‘cctbx::xray::twin_targets::hemihedral_r_values::hemihedral_r_values(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value&>; Value = cctbx::xray::twin_targets::hemihedral_r_values; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<5>::apply::execute(PyObject*, t0, t1, t2, t3, t4) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const scitbx::af::const_ref >&; t2 = const cctbx::sgtbx::space_group&; t3 = const bool&; t4 = const scitbx::mat3&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; Arity = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector5 >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; NArgs = boost::mpl::size >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::const_ref >&, const cctbx::sgtbx::space_group&, const bool&, const scitbx::mat3&>; W = cctbx::xray::twin_targets::hemihedral_r_values; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:169:13: required from here 168 | class_("hemihedral_r_values", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 | .def(init< | ~~~~^~~~~~ 170 | scitbx::af::const_ref< cctbx::miller::index<> > const&, // 1 obs indices | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 | scitbx::af::const_ref< cctbx::miller::index<> > const&, // 2 calc indices | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 | sgtbx::space_group const&, // 3 space group | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | bool const&, // 4 anomalous flag | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | scitbx::mat3 const& // 5 twin law | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 | > | ~ 176 | ((arg("hkl_obs"), | ~~~~~~~~~~~~~~~~~ 177 | arg("hkl_calc"), | ~~~~~~~~~~~~~~~~ 178 | arg("space_group"), | ~~~~~~~~~~~~~~~~~~~ 179 | arg("anomalous_flag"), | ~~~~~~~~~~~~~~~~~~~~~~ 180 | arg("twin_law") | ~~~~~~~~~~~~~~~ 181 | ))) | ~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:544:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 544 | for (long ii=0;ii::refine(const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/quadrature.h:523:14: required from ‘scitbx::math::quadrature::gauss_legendre_engine::gauss_legendre_engine(const int&) [with FloatType = double]’ 523 | x = refine( start_guess ); | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/twin_targets.h:1070:68: required from ‘cctbx::xray::twin_targets::single_twin_likelihood::single_twin_likelihood(const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const FloatType&, const bool&, const bool&, const FloatType&, const FloatType&, const FloatType&, const int&) [with FloatType = double]’ 1070 | scitbx::math::quadrature::gauss_legendre_engine tmp_gle(n_quad_); | ^~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8, A9, A10, A11, A12, A13) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; A9 = boost::python::objects::reference_to_value; A10 = boost::python::objects::reference_to_value; A11 = boost::python::objects::reference_to_value; A12 = boost::python::objects::reference_to_value; A13 = boost::python::objects::reference_to_value; Value = cctbx::xray::twin_targets::single_twin_likelihood; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<14>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8, t9, t10, t11, t12, t13) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector14; PyObject = _object; t0 = const double&; t1 = const double&; t2 = const double&; t3 = const double&; t4 = const double&; t5 = const double&; t6 = const double&; t7 = const double&; t8 = const bool&; t9 = const bool&; t10 = const double&; t11 = const double&; t12 = const double&; t13 = const int&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector14; NArgs = boost::mpl::size >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init; W = cctbx::xray::twin_targets::single_twin_likelihood; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/boost_python/twin_targets.cpp:343:14: required from here 342 | class_("single_twin_likelihood", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 | .def(init< | ~~~~^~~~~~ 344 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 | bool const&, bool const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 | double const&, double const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 | double const&, int const& | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 | > | ~ 352 | ((arg("i_obs1"), arg("s_obs1"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 | arg("i_obs2"), arg("s_obs2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 | arg("f_calc1"), arg("f_calc2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 | arg("eps1"), arg("eps2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 | arg("centric1"),arg("centric2"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 | arg("alpha"), arg("beta"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 | arg("twin_fraction"), arg("n_quad") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 | )) | ~~ 360 | ) | ~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/quadrature.h:546:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 546 | for (int ii=0;ii >&, scitbx::af::versa >&, const scitbx::vec2&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, double, double, const scitbx::vec2&, const scitbx::vec2&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:219:43: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 219 | for (std::size_t y = upper_left[1]; y < lower_right[1]; y++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/ext.cpp:220:45: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 220 | for (std::size_t x = upper_left[0]; x < lower_right[0]; x++) { g++ -o lib/libcbf-private.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libcbf-private.so.0 cbflib_adaptbx/detectors/mar_adaptor.o cbflib_adaptbx/detectors/cbf_adaptor.o cbflib_adaptbx/detectors/cbf_byte_offset_optimized.o cbflib_adaptbx/detectors/buffer_based_service.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lhdf5 -lcbf g++ -o exe_dev/cctbx.convert_ccp4_symop_lib -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/convert_ccp4_symop_lib.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.find_distances -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/find_distances.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.getting_started -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/getting_started.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm Create symlinks for: 'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so.0'->'lib/libcbf-private.so.0.0.1' 'lib/libcbf-private.so'->'lib/libcbf-private.so.0.0.1' g++ -o exe_dev/cbflib.tst_memory -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cbflib_adaptbx/detectors/tst_memory.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lcbf -lcbf-private -lm -lhdf5 g++ -o exe_dev/cctbx.lattice_symmetry -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/lattice_symmetry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sym_equiv_sites -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sym_equiv_sites.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o exe_dev/cctbx.sys_abs_equiv_space_groups -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread cctbx/examples/sys_abs_equiv_space_groups.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lboost_thread -lboost_system -lm g++ -o fable/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_10x20.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_10x20.cpp g++ -o gltbx/font_ucs_8x13.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_8x13.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/font_ucs_9x15.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/font_ucs_9x15.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/fonts_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/fonts_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_01_bpl.cpp g++ -o gltbx/gl_defines_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.cpp:10:1: warning: ‘typedef’ was ignored in this declaration 10 | typedef struct cbf_handle_struct; | ^~~~~~~ g++ -o gltbx/gl_defines_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_04_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_05_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here 141 | image_wrapper("ImageBool"); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here 142 | image_wrapper("ImageInt"); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘std::shared_ptr > dxtbx::format::boost_python::make_image_from_tuple(boost::python::tuple) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:125:40: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here 143 | image_wrapper("ImageDouble"); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:51:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 51 | for (std::size_t i = 0; i < boost::python::len(data); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = bool]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = bool]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:141:24: required from here 141 | image_wrapper("ImageBool"); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = int]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = int]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:142:23: required from here 142 | image_wrapper("ImageInt"); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc: In instantiation of ‘static void dxtbx::format::boost_python::ImagePickleSuite::setstate(dxtbx::format::Image&, boost::python::tuple) [with T = double]’: /usr/include/boost/python/class.hpp:345:9: required from ‘boost::python::class_::self& boost::python::class_::def_pickle(const PickleSuiteType&) [with PickleSuiteType = dxtbx::format::boost_python::ImagePickleSuite; W = dxtbx::format::Image; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 345 | &PickleSuiteType::setstate, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:134:18: required from ‘void dxtbx::format::boost_python::image_wrapper(const char*) [with T = double]’ 122 | class_(name) | ~~~~~~~~~~~~~~~~~~~~~~~~ 123 | .def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~ 124 | .def("__init__", make_constructor(&make_image_from_flex)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 | .def("__init__", make_constructor(&make_image_from_tuple)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 | .def("__getitem__", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 | .def("tile", &image_type::tile) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | .def("tile_names", &image_type::tile_names) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 | .def("n_tiles", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("empty", &image_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("append", &image_type::push_back) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("__len__", &image_type::n_tiles) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | .def("__iter__", range(&image_type::begin, &image_type::end)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def_pickle(ImagePickleSuite()); | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:143:26: required from here 143 | image_wrapper("ImageDouble"); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/format/boost_python/image_ext.cc:98:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 98 | for (std::size_t i = 0; i < boost::python::len(tile_list); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o gltbx/gl_defines_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_06_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_defines_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_defines_07_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/gl_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ g++ -o gltbx/gl_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan_helpers.cc:16: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_tuple(dxtbx::model::CrystalBase&, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:119:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 119 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_A_at_scan_points_from_list(dxtbx::model::CrystalBase&, boost::python::list)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:129:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 129 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In function ‘void dxtbx::model::boost_python::Crystal_set_B_covariance_from_tuple(dxtbx::model::CrystalBase&, boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:141:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 141 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::CrystalPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:155:22: warning: possibly dangling reference to a temporary [-Wdangling-reference] 155 | const Crystal &crystal = boost::python::extract(obj)(); | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:155:76: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 155 | const Crystal &crystal = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ g++ -o gltbx/gl_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment.cc:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::MosaicCrystalKabsch2010PickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:211:38: warning: possibly dangling reference to a temporary [-Wdangling-reference] 211 | const MosaicCrystalKabsch2010 &crystal = | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:212:69: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 212 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::MosaicCrystalSauter2014PickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:268:38: warning: possibly dangling reference to a temporary [-Wdangling-reference] 268 | const MosaicCrystalSauter2014 &crystal = | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/crystal.cc:269:69: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 269 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = bool; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 247 | return get_buffer_specific(obj); | ~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment_list.h:23, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:247:31: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 247 | return get_buffer_specific(obj); | ~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; g++ -o gltbx/gl_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_02_bpl.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:25: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:25: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned char; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:24, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/goniometer.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:25: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:24: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::VirtualPanelPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:33:27: warning: possibly dangling reference to a temporary [-Wdangling-reference] 33 | const VirtualPanel &p = extract(obj)(); | ^ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:33:65: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 33 | const VirtualPanel &p = extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment_list.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PanelPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:74:20: warning: possibly dangling reference to a temporary [-Wdangling-reference] 74 | const Panel &p = extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:74:51: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 74 | const Panel &p = extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ g++ -o gltbx/gl_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_03_bpl.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘void dxtbx::model::boost_python::detector_detail::node_from_dict(boost::python::dict, dxtbx::model::Detector::Node*, boost::python::list, scitbx::af::ref)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:88:9: note: in expansion of macro ‘DXTBX_ASSERT’ 88 | DXTBX_ASSERT(used.size() == boost::python::len(panels)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:89:9: note: in expansion of macro ‘DXTBX_ASSERT’ 89 | DXTBX_ASSERT(idx < boost::python::len(panels)); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:100:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 100 | for (std::size_t i = 0; i < boost::python::len(obj["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:124:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 124 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:134:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 134 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In function ‘dxtbx::model::Detector* dxtbx::model::boost_python::detector_detail::detector_from_dict(dxtbx::model::Detector*, boost::python::dict, const dxtbx::format::Image&, const dxtbx::format::Image&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:158:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 158 | for (std::size_t i = 0; i < boost::python::len(hierarchy["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:168:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 168 | for (std::size_t i = 0; i < boost::python::len(panels); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:183:25: warning: possibly dangling reference to a temporary [-Wdangling-reference] 183 | const Detector &detector = boost::python::extract(obj); | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:183:80: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::operator result_type()’ 183 | const Detector &detector = boost::python::extract(obj); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc: In static member function ‘static void dxtbx::model::boost_python::detector_detail::DetectorPickleSuite::copy_node(dxtbx::model::Detector::Node::pointer, boost::python::dict, boost::python::list)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/detector.cc:228:35: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 228 | for (std::size_t i = 0; i < boost::python::len(node["children"]); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/boost_python/ext.cc:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:27: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ g++ -o gltbx/gl_functions_04_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_04_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/experiment.h:19: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = unsigned int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/spectrum.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/spectrum.cc:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::goniometer_detail::GoniometerPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:50:27: warning: possibly dangling reference to a temporary [-Wdangling-reference] 50 | const Goniometer &goniometer = | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:51:58: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 51 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_tuple(dxtbx::model::Goniometer&, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:79:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 79 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc: In function ‘void dxtbx::model::boost_python::goniometer_detail::Goniometer_set_S_at_scan_points_from_list(dxtbx::model::Goniometer&, boost::python::list)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/goniometer.cc:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 89 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = long int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = signed char; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.cc:14: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; g++ -o gltbx/gl_functions_05_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_05_bpl.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = short int; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:21: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/goniometer.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:16: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = float; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid) [with T = double; grid = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:64:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (int i = 0; i < flex.accessor().nd(); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:66:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 66 | for (int j = i + 1; j < flex.accessor().nd(); ++j) { | ~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::beam_detail::BeamPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:52:21: warning: possibly dangling reference to a temporary [-Wdangling-reference] 52 | const Beam &beam = boost::python::extract(obj)(); | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:52:69: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 52 | const Beam &beam = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:88:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 88 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:90:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 90 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_tuple(dxtbx::model::Beam&, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:209:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 209 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In function ‘void dxtbx::model::boost_python::beam_detail::Beam_set_s0_at_scan_points_from_list(dxtbx::model::Beam&, boost::python::list)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:219:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 219 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PolychromaticBeamPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:302:32: warning: possibly dangling reference to a temporary [-Wdangling-reference] 302 | const PolychromaticBeam &beam = | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:303:63: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 303 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:302:32: warning: unused variable ‘beam’ [-Wunused-variable] 302 | const PolychromaticBeam &beam = | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc: In static member function ‘static void dxtbx::model::boost_python::PolychromaticBeamPickleSuite::setstate(boost::python::api::object, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/beam.cc:308:26: warning: unused variable ‘beam’ [-Wunused-variable] 308 | PolychromaticBeam &beam = boost::python::extract(obj)(); | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:138:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:140:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 140 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList* dxtbx::model::boost_python::make_experiment_list(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:30:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 30 | for (std::size_t i = 0; i < boost::python::len(items); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_setitem(dxtbx::model::ExperimentList&, int, dxtbx::model::Experiment)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:174:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 174 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::Experiment& dxtbx::model::boost_python::experiment_list_getitem(dxtbx::model::ExperimentList&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:184:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘dxtbx::model::ExperimentList dxtbx::model::boost_python::experiment_list_getitem_slice(const dxtbx::model::ExperimentList&, boost::python::slice)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:193:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘long int’ [-Wsign-compare] 193 | for (std::size_t i = as.start; i < as.stop && i < self.size(); i += as.step) { | ~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:166:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 166 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc: In function ‘void dxtbx::model::boost_python::experiment_list_delitem(dxtbx::model::ExperimentList&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/experiment_list.cc:203:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 203 | if (n >= self.size() || n < 0) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:168:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 168 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = long unsigned int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:191:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 191 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:193:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 193 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = double; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:215:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 215 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:217:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 217 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc: In instantiation of ‘pybind11::buffer_info get_buffer_specific(grid >) [with T = int; grid > = scitbx::af::versa, scitbx::af::flex_grid<> >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: recursively required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ 249 | return get_buffer(ptr); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:249:32: required from ‘pybind11::buffer_info get_buffer(PyObject*) [with T = scitbx::af::versa >; Q = scitbx::af::versa >; Args = {scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >, scitbx::af::versa, scitbx::af::flex_grid > >}; PyObject = _object]’ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:254:36: required from here 254 | return get_buffer(obj.ptr()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:113:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < dim_sizes.size(); ++i) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/flumpy.cc:115:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 115 | for (int j = i + 1; j < dim_sizes.size(); ++j) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o gltbx/gl_functions_06_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_06_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_07_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_07_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::multi_axis_goniometer_detail::MultiAxisGoniometerPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:38:36: warning: possibly dangling reference to a temporary [-Wdangling-reference] 38 | const MultiAxisGoniometer &goniometer = | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:39:67: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 39 | boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc: In function ‘T* dxtbx::model::boost_python::from_dict(boost::python::dict) [with T = dxtbx::model::MultiAxisGoniometer]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.cc:105:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 105 | for (std::size_t i = 0; i < boost::python::len(l); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ g++ -o gltbx/gl_functions_08_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_08_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_09_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_09_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_10_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_10_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:19: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h: In function ‘scitbx::af::shared dxtbx::model::get_mod2pi_angles_in_range(scitbx::vec2, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan_helpers.h:89:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 89 | for (std::size_t i = 0; i < n_angles; ++i) { | ~~^~~~~~~~~~ g++ -o gltbx/gl_functions_11_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_11_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_12_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_12_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/gl_functions_13_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_13_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/panel.cc:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::VirtualPanelPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:33:27: warning: possibly dangling reference to a temporary [-Wdangling-reference] 33 | const VirtualPanel &p = extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:33:65: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 33 | const VirtualPanel &p = extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h: In static member function ‘static boost::python::tuple dxtbx::model::boost_python::PanelPickleSuite::getstate(boost::python::api::object)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:74:20: warning: possibly dangling reference to a temporary [-Wdangling-reference] 74 | const Panel &p = extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/pickle_suite.h:74:51: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract(obj).boost::python::extract::boost::python::converter::extract_reference.boost::python::converter::extract_reference::operator()()’ 74 | const Panel &p = extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ g++ -o gltbx/gl_functions_14_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_14_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec2.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:17: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In constructor ‘dxtbx::model::Scan::Scan(scitbx::vec2, dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:44: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:148:7: note: in expansion of macro ‘DXTBX_ASSERT’ 148 | DXTBX_ASSERT(properties_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_properties(dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:37: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:242:7: note: in expansion of macro ‘DXTBX_ASSERT’ 242 | DXTBX_ASSERT(new_table.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_oscillation(scitbx::vec2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:397:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 397 | for (std::size_t i = 0; i < num_images_; ++i) { | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_exposure_times(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:42: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:411:7: note: in expansion of macro ‘DXTBX_ASSERT’ 411 | DXTBX_ASSERT(exposure_times.size() == num_images_); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::set_epochs(const scitbx::af::shared&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:417:7: note: in expansion of macro ‘DXTBX_ASSERT’ 417 | DXTBX_ASSERT(epochs.size() == num_images_); | ^~~~~~~~~~~~ g++ -o gltbx/gl_functions_15_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/gl_functions_15_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h: In member function ‘void dxtbx::model::Scan::append(const dxtbx::model::Scan&, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:39: warning: comparison of integer expressions of different signedness: ‘dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:556:7: note: in expansion of macro ‘DXTBX_ASSERT’ 556 | DXTBX_ASSERT(properties_.size() == num_images_); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:20: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:551:18: warning: ‘scitbx::vec3 dxtbx::model::Beam::direction_’ [-Wreorder] 551 | vec3 direction_; | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:93:5: warning: when initialized here [-Wreorder] 93 | Beam() | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:126:5: warning: when initialized here [-Wreorder] 126 | Beam(vec3 direction, double wavelength) | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:165:5: warning: when initialized here [-Wreorder] 165 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:193:5: warning: when initialized here [-Wreorder] 193 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In constructor ‘dxtbx::model::Beam::Beam(scitbx::vec3, double, double, double, scitbx::vec3, double, double, double, dxtbx::model::Probe, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:562:12: warning: ‘dxtbx::model::Beam::wavelength_’ will be initialized after [-Wreorder] 562 | double wavelength_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:552:12: warning: ‘double dxtbx::model::Beam::divergence_’ [-Wreorder] 552 | double divergence_; | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:227:5: warning: when initialized here [-Wreorder] 227 | Beam(vec3 direction, | ^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h: In member function ‘virtual scitbx::af::shared > dxtbx::model::PolychromaticBeam::get_s0_at_scan_points() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:52: warning: left operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/beam.h:760:60: warning: right operand of comma operator has no effect [-Wunused-value] 760 | return scitbx::af::shared >(1, (0., 0., 0.)); | ^~ g++ -o gltbx/glu_defines_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_defines_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/to_from_dict.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/str_ref.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/format.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp: In function ‘unsigned int fable::ext::get_code_stop(const boost::python::api::object&, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:24:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 24 | TBXX_ASSERT(stop <= len_code); | ~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp: In function ‘int fable::ext::floating_point_scan_after_dot(const boost::python::api::object&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/ext.cpp:71:11: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 71 | if (i < code_stop) { | ~~^~~~~~~~~~~ g++ -o gltbx/glu_defines_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_defines_01_bpl.cpp g++ -o gltbx/glu_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/glu_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_00_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_00_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In static member function ‘static void dxtbx::model::boost_python::ScanPickleSuite::setstate(dxtbx::model::Scan&, boost::python::tuple)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:41: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 162 | DXTBX_ASSERT(len(properties_dict) == ncols); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:162:7: note: in expansion of macro ‘DXTBX_ASSERT’ 162 | DXTBX_ASSERT(len(properties_dict) == ncols); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::dict dxtbx::model::boost_python::MaptoPythonDict(dxtbx::model::ExpImgRangeMap)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:187:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | for (int k = 0; k < val.size(); ++k) { | ~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc: In function ‘boost::python::list dxtbx::model::boost_python::get_valid_image_ranges(dxtbx::model::Scan&, std::string)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:374:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 374 | for (int k = 0; k < ranges.size(); ++k) { | ~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:24: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T* dxtbx::af::flex_table_suite::make_flex_table(boost::python::list) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1233:42: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:416:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 416 | for (std::size_t i = 0; i < len(columns); ++i) { | ~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::setitem_row(T&, typename T::size_type, boost::python::dict) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; typename T::size_type = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1252:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:525:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 525 | for (std::size_t i = 0; i < len(row); ++i) { | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘T dxtbx::af::flex_table_suite::select_cols_tuple(const T&, boost::python::tuple) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1265:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:747:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 747 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::set_selected_cols_tuple(T&, boost::python::tuple, const T&) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1269:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1266 | .def("set_selected", &set_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1267 | .def("set_selected", &set_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1268 | .def("set_selected", &set_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1269 | .def("set_selected", &set_selected_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:838:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 838 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In instantiation of ‘void dxtbx::af::flex_table_suite::del_selected_cols_tuple(T&, boost::python::tuple) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:1273:13: required from ‘static dxtbx::af::flex_table_suite::flex_table_wrapper::class_type dxtbx::af::flex_table_suite::flex_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 1232 | flex_table_class.def(init()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1233 | .def("__init__", make_constructor(&make_flex_table)) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 | .def("types", &types) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1235 | .def("has_key", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1236 | .def("clear", &flex_table_type::clear) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1237 | .def("empty", &flex_table_type::empty) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1238 | .def("resize", &flex_table_type::resize) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1239 | .def("append", &append) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1240 | .def("insert", &insert) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 | .def("extend", &extend) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1242 | .def("update", &update) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 | .def("nrows", &flex_table_type::nrows) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1244 | .def("ncols", &flex_table_type::ncols) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1245 | .def("is_consistent", &flex_table_type::is_consistent) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1246 | .def("size", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 | .def("__len__", &flex_table_type::size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 | .def("__contains__", &has_key) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1249 | .def("__getitem__", &getitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1250 | .def("__getitem__", &getitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1251 | .def("__getitem__", &getitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1252 | .def("__setitem__", &setitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1253 | .def("__setitem__", &setitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1254 | .def("__delitem__", &delitem_column) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1255 | .def("__delitem__", &delitem_row) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1256 | .def("__delitem__", &delitem_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1257 | .def("__iter__", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1258 | .def("cols", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1259 | .def("items", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 | .def("rows", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1261 | .def("keys", make_iterator >::range()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1262 | .def("select", &select_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1263 | .def("select", &select_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1264 | .def("select", &select_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1265 | .def("select", &select_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1266 | .def("set_selected", &set_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1267 | .def("set_selected", &set_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1268 | .def("set_selected", &set_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1269 | .def("set_selected", &set_selected_cols_tuple) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1270 | .def("del_selected", &del_selected_rows_index) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1271 | .def("del_selected", &del_selected_rows_flags) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1272 | .def("del_selected", &del_selected_cols_keys) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1273 | .def("del_selected", &del_selected_cols_tuple) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:177:29: required from ‘static dxtbx::model::boost_python::scan_property_table_wrapper::class_type dxtbx::model::boost_python::scan_property_table_wrapper::wrap(const char*) [with T = dxtbx::af::flex_table, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >; class_type = boost::python::class_, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > > >, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 177 | return base_type::wrap(name); | ~~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:584:72: required from here 584 | scan_property_table_wrapper >::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 585 | "scan_property_table"); | ~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:890:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 890 | for (std::size_t i = 0; i < len(keys); ++i) { | ~~^~~~~~~~~~~ g++ -o gltbx/glu_functions_01_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_01_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/goniometer_shadow_masking.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:30: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_circle(scitbx::af::ref >, double, double, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:79:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 79 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:80:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h: In function ‘void dxtbx::masking::mask_untrusted_polygon(scitbx::af::ref >, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:143:32: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 143 | for (std::size_t j = y0; j < y1; ++j) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/masking/masking.h:144:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 144 | for (std::size_t i = x0; i < x1; ++i) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::ImageBuffer dxtbx::ImageSet::get_raw_data(std::size_t)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:648:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 648 | if (data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘dxtbx::format::Image dxtbx::ImageSet::get_raw_data_as_double(std::size_t)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1116:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1116 | if (double_raw_data_cache_.index == index) { | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1063:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1063 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1203:12: note: by ‘dxtbx::ImageSet dxtbx::ImageGrid::partial_set(std::size_t, std::size_t) const’ 1203 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, scitbx::af::int2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1139:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1139 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1139:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1139 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageGrid::ImageGrid(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, scitbx::af::int2)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1153:46: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1153 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1153:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1153 | DXTBX_ASSERT(grid_size[0] * grid_size[1] == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1063:20: warning: ‘virtual dxtbx::ImageSet dxtbx::ImageSet::partial_set(boost::python::api::object, std::size_t, std::size_t) const’ was hidden [-Woverloaded-virtual=] 1063 | virtual ImageSet partial_set(boost::python::object reader, | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1474:12: note: by ‘dxtbx::ImageSet dxtbx::ImageSequence::partial_set(std::size_t, std::size_t) const’ 1474 | ImageSet partial_set(std::size_t first, std::size_t last) const { | ^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1238:23: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1238 | if (data.size() != scan->get_num_images()) { | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In constructor ‘dxtbx::ImageSequence::ImageSequence(const dxtbx::ImageSetData&, const scitbx::af::const_ref&, const dxtbx::ImageSet::beam_ptr&, const dxtbx::ImageSet::detector_ptr&, const dxtbx::ImageSet::goniometer_ptr&, const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1277:26: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 1277 | if (indices.size() != scan->get_num_images()) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In member function ‘void dxtbx::ImageSequence::set_scan(const dxtbx::ImageSet::scan_ptr&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1399:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1399 | if (scan->get_num_images() != size()) { | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1415:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 1415 | DXTBX_ASSERT(scan->get_num_images() == size()); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:1415:5: note: in expansion of macro ‘DXTBX_ASSERT’ 1415 | DXTBX_ASSERT(scan->get_num_images() == size()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:469:56: required from here 469 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:471:55: required from here 471 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h: In instantiation of ‘dxtbx::format::Image dxtbx::ImageSetData::get_image_from_tuple(boost::python::tuple) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:473:53: required from here 473 | buffer = ImageBuffer(get_image_from_tuple(obj)); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/imageset.h:502:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 502 | for (std::size_t i = 0; i < boost::python::len(obj); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::BeamBase; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:249:56: required from here 249 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 250 | obj, | ~~~~ 251 | boost::python::extract(models[0])(), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 | &ImageSetData::set_beam); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Detector; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:253:56: required from here 253 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 254 | obj, | ~~~~ 255 | boost::python::extract(models[1]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 | &ImageSetData::set_detector); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Goniometer; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:257:58: required from here 257 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 258 | obj, | ~~~~ 259 | boost::python::extract(models[2]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 | &ImageSetData::set_goniometer); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc: In instantiation of ‘static void dxtbx::boost_python::ImageSetDataPickleSuite::set_model_list(dxtbx::ImageSetData&, boost::python::tuple, Func) [with Model = dxtbx::model::Scan; Func = void (dxtbx::ImageSetData::*)(const std::shared_ptr&, long unsigned int)]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:261:52: required from here 261 | ImageSetDataPickleSuite::set_model_list( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 262 | obj, | ~~~~ 263 | boost::python::extract(models[3]), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 | &ImageSetData::set_scan); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:231:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 231 | for (std::size_t i = 0; i < boost::python::len(models); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/boost_python/imageset_ext.cc:235:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 235 | for (std::size_t i = 0; i < boost::python::len(indices); ++i) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o gltbx/glu_functions_02_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_02_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/glu_functions_03_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 gltbx/glu_functions_03_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/quadrics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/quadrics_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/util_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/util_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o gltbx/viewer_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/gltbx/viewer_utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/ccp4_map/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/cif/boost_python/cif_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/cif/boost_python/cif_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/bruker.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/bruker.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/bruker_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/bruker_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/detectors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/detectors_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/detectors/image_divider.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/image_divider.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/dsn6/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/dsn6/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/misc/boost_python/dtrek_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/misc/boost_python/dtrek_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/misc/boost_python/scalepack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/misc/boost_python/scalepack_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/batch_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/column.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/column_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/crystal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/crystal_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/dataset.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/dataset_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/object.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/mtz/object_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DMSETS=32 -DMXTALS=32 -DMCOLUMNS=128 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/atom_selection.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/atom_selection.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/common_residue_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/common_residue_names_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/construct_hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/construct_hierarchy.cpp g++ -o iotbx/pdb/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_atom_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atom_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/atom_selection.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/construct_hierarchy.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_atoms.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_atoms_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/sym_equiv.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/miller/asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_set_grid(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:178:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 178 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:213:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 213 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 215 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:216:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 216 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_box(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:245:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 245 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:278:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 278 | for (int i = 0; i < data_ref.accessor()[0]; i++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:280:25: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 280 | for (int j = 0; j < data_ref.accessor()[1]; j++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:281:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 281 | for (int k = 0; k < data_ref.accessor()[2]; k++) { /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp: In function ‘void iotbx::ccp4_map::write_ccp4_map_p1_cell(const std::string&, const cctbx::uctbx::unit_cell&, const cctbx::sgtbx::space_group&, const scitbx::af::int3&, const scitbx::af::int3&, const scitbx::af::const_ref >&, const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/ccp4_map/ext.cpp:311:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 311 | for (int i = 0; i < labels.size(); i++) { | ~~^~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_ext.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:242:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 242 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp(const scitbx::af::const_ref&, int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:248:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 248 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:257:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 257 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp: In function ‘std::auto_ptr iotbx::pdb::hierarchy::atoms::reset_tmp_for_occupancy_groups_simple(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.cpp:261:10: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 261 | std::auto_ptr result(new atom_tmp_sentinel(atoms)); | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp: In member function ‘void iotbx::mtz::column::set_reals(const scitbx::af::const_ref&, const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp:253:48: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.cpp:253:5: note: in expansion of macro ‘IOTBX_ASSERT’ 253 | IOTBX_ASSERT(mtz_reflection_indices.size() <= nref_at_entry); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/hierarchy_select.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_select.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hierarchy_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_write.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hybrid_36_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hybrid_36_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp: In member function ‘void iotbx::mtz::object::replace_miller_indices(const scitbx::af::const_ref >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:433:40: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:433:5: note: in expansion of macro ‘IOTBX_ASSERT’ 433 | IOTBX_ASSERT(miller_indices.size() == n_reflections()); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:435:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 435 | for(int i_refl=0;i_refl iotbx::mtz::object::extract_integers(const scitbx::af::const_ref&, const char*) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:624:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 624 | for(int i=0;i iotbx::mtz::object::extract_reals(const scitbx::af::const_ref&, const char*) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.cpp:684:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 684 | for(int i=0;i::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -o iotbx/pdb/hybrid_36_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hybrid_36_c.c g++ -o iotbx/pdb/hybrid_36_cpp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hybrid_36_cpp.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:5: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hybrid_36_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable iotbx/pdb/hybrid_36_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_select.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/input.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/input_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/pdb/input_write.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input_write.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/overall_counts.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/overall_counts.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/rna_dna_atom_names_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/rna_dna_atom_names_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/write_utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/xray_structure_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/xray_structure_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/overall_counts.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/shelx/shelx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/shelx/shelx_ext.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem.hpp:10, from iotbx/pdb/hybrid_36_fem.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/wildcard_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/wildcard_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o iotbx/xplor/boost_python/xplor_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/xplor/boost_python/xplor_ext.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input_write.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/libann_adaptor.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libann_adaptor.so.0 annlib_adaptbx/ann/ann_adaptor.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lann-cctbx /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_boost_thread_test_ext.so.0 boost_adaptbx/tests/boost_thread_test.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so.0'->'lib/libann_adaptor.so.0.0.1' 'lib/libann_adaptor.so'->'lib/libann_adaptor.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/namespace.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::dataset; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset_bpl.cpp:43:60: required from here 43 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 44 | "shared_dataset"); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/annlib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=annlib_ext.so.0 annlib_adaptbx/ann/boost_python/annlib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lann-cctbx -lann_adaptor -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so.0'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' 'lib/boost_adaptbx_boost_thread_test_ext.so'->'lib/boost_adaptbx_boost_thread_test_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp: In destructor ‘iotbx::pdb::write_utils::fstream_open_close::~fstream_open_close()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp:42:7: warning: ‘throw’ will always call ‘terminate’ [-Wterminate] 42 | throw std::runtime_error( | ^~~~~~~~~~~~~~~~~~~~~~~~~ 43 | "Failure writing to file: \"" + file_name + "\""); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/write_utils.cpp:42:7: note: in C++11 destructors default to ‘noexcept’ g++ -o lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_breadth_first_search_ext.so.0 boost_adaptbx/graph/breadth_first_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::batch; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch_bpl.cpp:78:60: required from here 78 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 79 | "shared_batch"); | ~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so.0'->'lib/annlib_ext.so.0.0.1' 'lib/annlib_ext.so'->'lib/annlib_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_clustering_algorithm_ext.so.0 boost_adaptbx/graph/clustering_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' 'lib/boost_adaptbx_graph_breadth_first_search_ext.so'->'lib/boost_adaptbx_graph_breadth_first_search_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_connected_component_algorithm_ext.so.0 boost_adaptbx/graph/connected_component_algorithm_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_clustering_algorithm_ext.so'->'lib/boost_adaptbx_graph_clustering_algorithm_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/file_utils.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/input.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ g++ -o lib/boost_adaptbx_graph_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_ext.so.0 boost_adaptbx/graph/graph_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_graph_structure_comparison_ext.so.0 boost_adaptbx/graph/graph_structure_comparison_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::crystal; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal_bpl.cpp:42:60: required from here 42 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 43 | "shared_crystal"); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' 'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so'->'lib/boost_adaptbx_graph_connected_component_algorithm_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_maximum_clique_ext.so.0 boost_adaptbx/graph/maximum_clique_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' 'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so'->'lib/boost_adaptbx_graph_graph_structure_comparison_ext.so.0.0.1' g++ -o lib/boost_adaptbx_graph_metric_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_metric_ext.so.0 boost_adaptbx/graph/metric_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_min_cut_max_flow_ext.so.0 boost_adaptbx/graph/min_cut_max_flow_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_adaptbx_graph_utility_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_graph_utility_ext.so.0 boost_adaptbx/graph/utility_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/hendrickson_lattman.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::mtz::column; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/column_bpl.cpp:76:60: required from here 76 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 77 | "shared_column"); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_adaptbx_python_streambuf_test_ext.so.0 boost_adaptbx/tests/python_streambuf_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' 'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so'->'lib/boost_adaptbx_graph_min_cut_max_flow_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so.0'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' 'lib/boost_adaptbx_graph_metric_ext.so'->'lib/boost_adaptbx_graph_metric_ext.so.0.0.1' Create symlinks for: 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so.0'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' 'lib/boost_adaptbx_graph_maximum_clique_ext.so'->'lib/boost_adaptbx_graph_maximum_clique_ext.so.0.0.1' g++ -o lib/boost_optional_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_optional_ext.so.0 boost_adaptbx/optional_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer g++ -o lib/boost_python_hybrid_times_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_hybrid_times_ext.so.0 boost_adaptbx/hybrid_times_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/boost_python_meta_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_python_meta_ext.so.0 boost_adaptbx/meta_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so.0'->'lib/boost_optional_ext.so.0.0.1' 'lib/boost_optional_ext.so'->'lib/boost_optional_ext.so.0.0.1' g++ -o lib/boost_rational_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_rational_ext.so.0 boost_adaptbx/rational_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so.0'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' 'lib/boost_adaptbx_graph_utility_ext.so'->'lib/boost_adaptbx_graph_utility_ext.so.0.0.1' g++ -o lib/boost_tuple_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=boost_tuple_ext.so.0 boost_adaptbx/tuple_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so.0'->'lib/boost_python_hybrid_times_ext.so.0.0.1' 'lib/boost_python_hybrid_times_ext.so'->'lib/boost_python_hybrid_times_ext.so.0.0.1' g++ -o lib/cbflib_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cbflib_ext.so.0 cbflib_adaptbx/detectors/boost_python/cbflib_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lcbf-private -lcbf -lboost_thread -lboost_system -lboost_python312 -lm -lhdf5 Create symlinks for: 'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so.0'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' 'lib/boost_adaptbx_python_streambuf_test_ext.so'->'lib/boost_adaptbx_python_streambuf_test_ext.so.0.0.1' g++ -o lib/libccp4io.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libccp4io.so.0 ccp4io_adaptbx/fortran_call_stubs.o ccp4io_adaptbx/printf_wrappers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lm -lccp4c Create symlinks for: 'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so.0'->'lib/boost_rational_ext.so.0.0.1' 'lib/boost_rational_ext.so'->'lib/boost_rational_ext.so.0.0.1' Create symlinks for: 'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so.0'->'lib/boost_python_meta_ext.so.0.0.1' 'lib/boost_python_meta_ext.so'->'lib/boost_python_meta_ext.so.0.0.1' Create symlinks for: 'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so.0'->'lib/libccp4io.so.0.0.1' 'lib/libccp4io.so'->'lib/libccp4io.so.0.0.1' g++ -o scitbx/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/utils.cpp g++ -o lib/ccp4io_adaptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=ccp4io_adaptbx_ext.so.0 ccp4io_adaptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lccp4io -lccp4c -lssm -lmmdb2 -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/boost_python/slice.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/slice.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h: At global scope: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/misc.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer_flags.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:4: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ Create symlinks for: 'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so.0'->'lib/boost_tuple_ext.so.0.0.1' 'lib/boost_tuple_ext.so'->'lib/boost_tuple_ext.so.0.0.1' Create symlinks for: 'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so.0'->'lib/cbflib_ext.so.0.0.1' 'lib/cbflib_ext.so'->'lib/cbflib_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp: In function ‘void iotbx::pdb::hierarchy::atoms::bpl_wrap()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:84:17: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 84 | std::auto_ptr, | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ Create symlinks for: 'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so.0'->'lib/boost_adaptbx_graph_ext.so.0.0.1' 'lib/boost_adaptbx_graph_ext.so'->'lib/boost_adaptbx_graph_ext.so.0.0.1' g++ -o lib/cma_es_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cma_es_ext.so.0 cma_es/cma_es_ext.o cma_es/cma/cmaes.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_ext.so.0 dxtbx/src/dxtbx/boost_python/ext.o dxtbx/src/dxtbx/boost_python/compression.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf g++ -o lib/dxtbx_format_nexus_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_nexus_ext.so.0 dxtbx/src/dxtbx/format/boost_python/nexus_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so.0'->'lib/ccp4io_adaptbx_ext.so.0.0.1' 'lib/ccp4io_adaptbx_ext.so'->'lib/ccp4io_adaptbx_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rot_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/rt_mx.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/change_of_basis_op.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tr_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/space_group.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/crystal.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/dataset.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/batch.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object_bpl.cpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h: In member function ‘void iotbx::mtz::object::delete_reflections(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:30: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 591 | IOTBX_ASSERT(iref[0] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:591:9: note: in expansion of macro ‘IOTBX_ASSERT’ 591 | IOTBX_ASSERT(iref[0] < oldsize); | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:32: warning: comparison of integer expressions of different signedness: ‘const long unsigned int’ and ‘int’ [-Wsign-compare] 594 | IOTBX_ASSERT(iref[i] < oldsize); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/mtz/object.h:594:11: note: in expansion of macro ‘IOTBX_ASSERT’ 594 | IOTBX_ASSERT(iref[i] < oldsize); | ^~~~~~~~~~~~ g++ -o lib/fable_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=fable_ext.so.0 fable/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so.0'->'lib/cma_es_ext.so.0.0.1' 'lib/cma_es_ext.so'->'lib/cma_es_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o ucif/cifParser.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ucif/cifParser.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so.0'->'lib/dxtbx_ext.so.0.0.1' 'lib/dxtbx_ext.so'->'lib/dxtbx_ext.so.0.0.1' g++ -o ucif/cifLexer.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/ucif/cifLexer.cpp Create symlinks for: 'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so.0'->'lib/fable_ext.so.0.0.1' 'lib/fable_ext.so'->'lib/fable_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/iotbx_detectors_bruker_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_bruker_ext.so.0 iotbx/detectors/bruker_ext.o iotbx/detectors/bruker.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so.0'->'lib/dxtbx_format_nexus_ext.so.0.0.1' 'lib/dxtbx_format_nexus_ext.so'->'lib/dxtbx_format_nexus_ext.so.0.0.1' g++ -o lib/iotbx_dsn6_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dsn6_map_ext.so.0 iotbx/dsn6/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/iotbx_ccp4_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_ccp4_map_ext.so.0 iotbx/ccp4_map/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lccp4c -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so.0'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' 'lib/iotbx_detectors_bruker_ext.so'->'lib/iotbx_detectors_bruker_ext.so.0.0.1' g++ -o lib/iotbx_dtrek_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_dtrek_ext.so.0 iotbx/misc/boost_python/dtrek_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/function/function_base.hpp:28, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:87:36: required from here 87 | class_ wa = wat::wrap("af_shared_atom"); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so.0'->'lib/iotbx_dsn6_map_ext.so.0.0.1' 'lib/iotbx_dsn6_map_ext.so'->'lib/iotbx_dsn6_map_ext.so.0.0.1' g++ -o lib/iotbx_scalepack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_scalepack_ext.so.0 iotbx/misc/boost_python/scalepack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = iotbx::pdb::hierarchy::atom_with_labels; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms_bpl.cpp:91:44: required from here 91 | class_ wawl = wawl_t::wrap("af_shared_atom_with_labels"); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/dxtbx_format_image_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_format_image_ext.so.0 dxtbx/src/dxtbx/format/boost_python/image_ext.o dxtbx/src/dxtbx/format/boost_python/cbf_read_buffer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 Create symlinks for: 'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so.0'->'lib/iotbx_dtrek_ext.so.0.0.1' 'lib/iotbx_dtrek_ext.so'->'lib/iotbx_dtrek_ext.so.0.0.1' Create symlinks for: 'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so.0'->'lib/iotbx_ccp4_map_ext.so.0.0.1' 'lib/iotbx_ccp4_map_ext.so'->'lib/iotbx_ccp4_map_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/libdistl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so.0'->'lib/iotbx_scalepack_ext.so.0.0.1' 'lib/iotbx_scalepack_ext.so'->'lib/iotbx_scalepack_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/distl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/spot.cpp g++ -o spotfinder/core_toolbox/libdistl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/libdistl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so.0'->'lib/dxtbx_format_image_ext.so.0.0.1' 'lib/dxtbx_format_image_ext.so'->'lib/dxtbx_format_image_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/hough.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/hough.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_ext.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:157:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 157 | std::auto_ptr | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_ext.cpp:4: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/hierarchy_atoms.h:163:8: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 163 | std::auto_ptr | ^~~~~~~~ /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ g++ -o spotfinder/core_toolbox/distl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/distl.cpp g++ -o spotfinder/core_toolbox/spotfilter.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Ispotfinder/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/src -Ispotfinder/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/spotfilter.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/utils.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/utils.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o mmtbx/masks/atom_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/masks/atom_mask.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/tls/decompose.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/decompose.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/dps_core/dps_core.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/dps_core.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o iotbx/pdb/hybrid_36_fem -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread iotbx/pdb/hybrid_36_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o rstbx/dps_core/directional_fft.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/directional_fft.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/iotbx_cif_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_cif_ext.so.0 iotbx/cif/boost_python/cif_ext.o ucif/cifParser.o ucif/cifLexer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lantlr3c g++ -o rstbx/dps_core/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/direction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so.0'->'lib/iotbx_cif_ext.so.0.0.1' 'lib/iotbx_cif_ext.so'->'lib/iotbx_cif_ext.so.0.0.1' g++ -o rstbx/indexing_api/indexing_api.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/indexing_api.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libiotbx_mtz.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_mtz.so.0 iotbx/mtz/object.o iotbx/mtz/crystal.o iotbx/mtz/dataset.o iotbx/mtz/column.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lccp4io -lccp4c -lm -lboost_thread -lboost_system g++ -o lib/iotbx_wildcard_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_wildcard_ext.so.0 iotbx/wildcard_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o rstbx/diffraction/ewald_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/ewald_sphere.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so.0'->'lib/iotbx_wildcard_ext.so.0.0.1' 'lib/iotbx_wildcard_ext.so'->'lib/iotbx_wildcard_ext.so.0.0.1' g++ -o rstbx/diffraction/partial_spot_position_partial_H.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/partial_spot_position_partial_H.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so.0'->'lib/libiotbx_mtz.so.0.0.1' 'lib/libiotbx_mtz.so'->'lib/libiotbx_mtz.so.0.0.1' g++ -o scitbx/minpack/raw.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/raw.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ gcc -o scitbx/slatec/lib_c.o -c -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/slatec/lib_c.c g++ -o smtbx/refinement/constraints/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/affine.cpp g++ -o lib/libscitbx_slatec.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libscitbx_slatec.so.0 scitbx/slatec/lib_c.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so.0'->'lib/libscitbx_slatec.so.0.0.1' 'lib/libscitbx_slatec.so'->'lib/libscitbx_slatec.so.0.0.1' g++ -o smtbx/refinement/constraints/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/occupancy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/xray_structure.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/pdb/xray_structure_bpl.cpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i'lib/libscitbx_minpack.so.0.0.1' 'lib/libscitbx_minpack.so'->'lib/libscitbx_minpack.so.0.0.1' g++ -o smtbx/refinement/constraints/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/rigid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libscitbx_boost_python.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -shared -rdynamic -std=c++14 -Wl,-soname=libscitbx_boost_python.so.0 scitbx/boost_python/utils.o scitbx/boost_python/slice.o scitbx/array_family/boost_python/utils.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 g++ -o smtbx/refinement/constraints/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/same_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so.0'->'lib/libscitbx_boost_python.so.0.0.1' 'lib/libscitbx_boost_python.so'->'lib/libscitbx_boost_python.so.0.0.1' g++ -o lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_fp_fdp_ext.so.0 cctbx/eltbx/boost_python/fp_fdp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so.0'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' 'lib/cctbx_eltbx_fp_fdp_ext.so'->'lib/cctbx_eltbx_fp_fdp_ext.so.0.0.1' g++ -o lib/cctbx_anharmonic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_anharmonic_ext.so.0 cctbx/adptbx/boost_python/anharmonic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_geometry_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_restraints_ext.so.0 cctbx/geometry_restraints/geometry_restraints_ext.o cctbx/geometry_restraints/bond_bpl.o cctbx/geometry_restraints/bond_similarity_bpl.o cctbx/geometry_restraints/bond_sorted_bpl.o cctbx/geometry_restraints/nonbonded_bpl.o cctbx/geometry_restraints/nonbonded_sorted_bpl.o cctbx/geometry_restraints/angle_bpl.o cctbx/geometry_restraints/dihedral_bpl.o cctbx/geometry_restraints/chirality_bpl.o cctbx/geometry_restraints/planarity_bpl.o cctbx/geometry_restraints/parallelity_bpl.o cctbx/geometry_restraints/motif_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_bcr_bcr_ext.so.0 cctbx/maptbx/bcr/bcr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/gltbx_util_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_util_ext.so.0 gltbx/util_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so.0'->'lib/cctbx_anharmonic_ext.so.0.0.1' 'lib/cctbx_anharmonic_ext.so'->'lib/cctbx_anharmonic_ext.so.0.0.1' g++ -o lib/cctbx_xray_observations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_observations_ext.so.0 cctbx/xray/observations/boost_python/observations.o cctbx/xray/observations/boost_python/observations_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/gltbx_quadrics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_quadrics_ext.so.0 gltbx/quadrics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so.0'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' 'lib/cctbx_maptbx_bcr_bcr_ext.so'->'lib/cctbx_maptbx_bcr_bcr_ext.so.0.0.1' g++ -o lib/cctbx_crystal_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_crystal_ext.so.0 cctbx/crystal/crystal_ext.o cctbx/crystal/asu_clusters_bpl.o cctbx/crystal/close_packing_bpl.o cctbx/crystal/coordination_sequences_bpl.o cctbx/crystal/direct_space_asu_bpl.o cctbx/crystal/incremental_pairs_bpl.o cctbx/crystal/neighbors_bpl.o cctbx/crystal/pair_tables_bpl.o cctbx/crystal/site_cluster_analysis_bpl.o cctbx/crystal/symmetry_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so.0'->'lib/gltbx_quadrics_ext.so.0.0.1' 'lib/gltbx_quadrics_ext.so'->'lib/gltbx_quadrics_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_wavelengths_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_wavelengths_ext.so.0 cctbx/eltbx/boost_python/wavelengths_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so.0'->'lib/gltbx_util_ext.so.0.0.1' 'lib/gltbx_util_ext.so'->'lib/gltbx_util_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so.0'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' 'lib/cctbx_eltbx_wavelengths_ext.so'->'lib/cctbx_eltbx_wavelengths_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_covalent_radii_ext.so.0 cctbx/eltbx/boost_python/covalent_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_statistics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_statistics_ext.so.0 cctbx/boost_python/statistics_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_orientation_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_orientation_ext.so.0 cctbx/boost_python/orientation_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so.0'->'lib/cctbx_xray_observations_ext.so.0.0.1' 'lib/cctbx_xray_observations_ext.so'->'lib/cctbx_xray_observations_ext.so.0.0.1' g++ -o lib/cctbx_xray_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_xray_ext.so.0 cctbx/xray/boost_python/xray_ext.o cctbx/xray/boost_python/conversions.o cctbx/xray/boost_python/gradient_flags.o cctbx/xray/boost_python/gradients_direct.o cctbx/xray/boost_python/each_hkl_gradients_direct.o cctbx/xray/boost_python/fast_gradients.o cctbx/xray/boost_python/minimization.o cctbx/xray/boost_python/scatterer_flags.o cctbx/xray/boost_python/scatterer.o cctbx/xray/boost_python/scattering_type_registry.o cctbx/xray/boost_python/sampling_base.o cctbx/xray/boost_python/sampled_model_density.o cctbx/xray/boost_python/structure_factors_direct.o cctbx/xray/boost_python/structure_factors_simple.o cctbx/xray/boost_python/curvatures_simple.o cctbx/xray/boost_python/targets.o cctbx/xray/boost_python/f_model_bpl.o cctbx/xray/boost_python/twin_targets.o cctbx/xray/boost_python/grouped_data.o cctbx/xray/boost_python/parameter_map.o cctbx/xray/boost_python/twin_components.o cctbx/xray/boost_python/extinction.o cctbx/xray/boost_python/sigmaa.o cctbx/xray/targets/shelxl_wght_ls_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so.0'->'lib/cctbx_orientation_ext.so.0.0.1' 'lib/cctbx_orientation_ext.so'->'lib/cctbx_orientation_ext.so.0.0.1' g++ -o lib/cctbx_adp_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adp_restraints_ext.so.0 cctbx/adp_restraints/adp_restraints_bpl.o cctbx/adp_restraints/adp_restraints_ext.o cctbx/adp_restraints/rigid_bond_bpl.o cctbx/adp_restraints/rigu_bpl.o cctbx/adp_restraints/adp_similarity_bpl.o cctbx/adp_restraints/isotropic_adp_bpl.o cctbx/adp_restraints/aniso_restraints_bpl.o cctbx/adp_restraints/fixed_u_eq_adp_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so.0'->'lib/cctbx_statistics_ext.so.0.0.1' 'lib/cctbx_statistics_ext.so'->'lib/cctbx_statistics_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so.0'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_covalent_radii_ext.so'->'lib/cctbx_eltbx_covalent_radii_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_neutron_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_neutron_ext.so.0 cctbx/eltbx/boost_python/neutron_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_translation_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_translation_search_ext.so.0 cctbx/translation_search/boost_python/translation_search_ext.o cctbx/translation_search/boost_python/fast_nv1995.o cctbx/translation_search/boost_python/fast_terms.o cctbx/translation_search/boost_python/symmetry_flags.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so.0'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' 'lib/cctbx_eltbx_neutron_ext.so'->'lib/cctbx_eltbx_neutron_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_tiny_pse_ext.so.0 cctbx/eltbx/boost_python/tiny_pse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/determine_unit_cell_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=determine_unit_cell_ext.so.0 cctbx/uctbx/determine_unit_cell/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_dmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_dmtbx_ext.so.0 cctbx/dmtbx/boost_python/dmtbx_ext.o cctbx/dmtbx/boost_python/triplet_phase_relation.o cctbx/dmtbx/boost_python/triplet_generator.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so.0'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' 'lib/cctbx_eltbx_tiny_pse_ext.so'->'lib/cctbx_eltbx_tiny_pse_ext.so.0.0.1' g++ -o lib/dxtbx_flumpy.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_flumpy.so.0 dxtbx/src/dxtbx/boost_python/flumpy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 g++ -o lib/cctbx_symmetry_search_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_symmetry_search_ext.so.0 cctbx/symmetry_search/boost_python/symmetry_search_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_chemical_elements_ext.so.0 cctbx/eltbx/boost_python/chemical_elements_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so.0'->'lib/determine_unit_cell_ext.so.0.0.1' 'lib/determine_unit_cell_ext.so'->'lib/determine_unit_cell_ext.so.0.0.1' g++ -o lib/cctbx_geometry_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_geometry_ext.so.0 cctbx/geometry/boost_python/geometry_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so.0'->'lib/cctbx_translation_search_ext.so.0.0.1' 'lib/cctbx_translation_search_ext.so'->'lib/cctbx_translation_search_ext.so.0.0.1' g++ -o lib/cctbx_miller_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_miller_ext.so.0 cctbx/miller/boost_python/miller_ext.o cctbx/miller/boost_python/asu.o cctbx/miller/boost_python/bins.o cctbx/miller/boost_python/change_basis.o cctbx/miller/boost_python/expand_to_p1.o cctbx/miller/boost_python/index_generator.o cctbx/miller/boost_python/index_span.o cctbx/miller/boost_python/match_bijvoet_mates.o cctbx/miller/boost_python/match_indices.o cctbx/miller/boost_python/match_multi_indices.o cctbx/miller/boost_python/merge_equivalents.o cctbx/miller/boost_python/phase_integrator.o cctbx/miller/boost_python/phase_transfer.o cctbx/miller/boost_python/sym_equiv.o cctbx/miller/boost_python/f_calc_map.o cctbx/miller/boost_python/lookup_utils.o cctbx/miller/boost_python/amplitude_normalisation.o cctbx/miller/boost_python/randomize_amplitude_and_phase.o cctbx/miller/boost_python/slices.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so.0'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' 'lib/cctbx_eltbx_chemical_elements_ext.so'->'lib/cctbx_eltbx_chemical_elements_ext.so.0.0.1' g++ -o lib/cctbx_adptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_adptbx_ext.so.0 cctbx/adptbx/boost_python/adptbx_ext.o cctbx/adptbx/boost_python/hirshfeld.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_sgtbx_asu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_asu_ext.so.0 cctbx/sgtbx/direct_space_asu/proto/asu_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx_sgtbx_asu -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so.0'->'lib/cctbx_dmtbx_ext.so.0.0.1' 'lib/cctbx_dmtbx_ext.so'->'lib/cctbx_dmtbx_ext.so.0.0.1' g++ -o lib/gltbx_glu_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_glu_ext.so.0 gltbx/glu_ext.o gltbx/glu_defines_00_bpl.o gltbx/glu_defines_01_bpl.o gltbx/glu_functions_00_bpl.o gltbx/glu_functions_01_bpl.o gltbx/glu_functions_02_bpl.o gltbx/glu_functions_03_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm g++ -o lib/libmmtbx_tls.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libmmtbx_tls.so.0 mmtbx/tls/decompose.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lm Create symlinks for: 'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so.0'->'lib/cctbx_symmetry_search_ext.so.0.0.1' 'lib/cctbx_symmetry_search_ext.so'->'lib/cctbx_symmetry_search_ext.so.0.0.1' g++ -o lib/cctbx_sgtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_sgtbx_ext.so.0 cctbx/sgtbx/boost_python/sgtbx_ext.o cctbx/sgtbx/boost_python/brick.o cctbx/sgtbx/boost_python/change_of_basis.o cctbx/sgtbx/boost_python/find_affine.o cctbx/sgtbx/boost_python/lattice_symmetry.o cctbx/sgtbx/boost_python/phase_info.o cctbx/sgtbx/boost_python/reciprocal_space_asu.o cctbx/sgtbx/boost_python/rot_mx.o cctbx/sgtbx/boost_python/rt_mx.o cctbx/sgtbx/boost_python/search_symmetry.o cctbx/sgtbx/boost_python/seminvariant.o cctbx/sgtbx/boost_python/site_symmetry.o cctbx/sgtbx/boost_python/space_group.o cctbx/sgtbx/boost_python/space_group_type.o cctbx/sgtbx/boost_python/sym_equiv_sites.o cctbx/sgtbx/boost_python/symbols.o cctbx/sgtbx/boost_python/tensor_rank_2.o cctbx/sgtbx/boost_python/tensors.o cctbx/sgtbx/boost_python/tr_vec.o cctbx/sgtbx/boost_python/wyckoff.o cctbx/sgtbx/boost_python/select_generators.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so.0'->'lib/cctbx_geometry_ext.so.0.0.1' 'lib/cctbx_geometry_ext.so'->'lib/cctbx_geometry_ext.so.0.0.1' g++ -o lib/cctbx_uctbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_uctbx_ext.so.0 cctbx/uctbx/boost_python/uctbx_ext.o cctbx/uctbx/boost_python/fast_minimum_reduction.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so.0'->'lib/dxtbx_flumpy.so.0.0.1' 'lib/dxtbx_flumpy.so'->'lib/dxtbx_flumpy.so.0.0.1' Create symlinks for: 'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so.0'->'lib/libmmtbx_tls.so.0.0.1' 'lib/libmmtbx_tls.so'->'lib/libmmtbx_tls.so.0.0.1' g++ -o lib/gltbx_viewer_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_viewer_utils_ext.so.0 gltbx/viewer_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm g++ -o lib/cctbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_math_ext.so.0 cctbx/math/boost_python/math_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so.0'->'lib/gltbx_glu_ext.so.0.0.1' 'lib/gltbx_glu_ext.so'->'lib/gltbx_glu_ext.so.0.0.1' g++ -o lib/gltbx_gl_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_gl_ext.so.0 gltbx/gl_ext.o gltbx/gl_defines_00_bpl.o gltbx/gl_defines_01_bpl.o gltbx/gl_defines_02_bpl.o gltbx/gl_defines_03_bpl.o gltbx/gl_defines_04_bpl.o gltbx/gl_defines_05_bpl.o gltbx/gl_defines_06_bpl.o gltbx/gl_defines_07_bpl.o gltbx/gl_functions_00_bpl.o gltbx/gl_functions_01_bpl.o gltbx/gl_functions_02_bpl.o gltbx/gl_functions_03_bpl.o gltbx/gl_functions_04_bpl.o gltbx/gl_functions_05_bpl.o gltbx/gl_functions_06_bpl.o gltbx/gl_functions_07_bpl.o gltbx/gl_functions_08_bpl.o gltbx/gl_functions_09_bpl.o gltbx/gl_functions_10_bpl.o gltbx/gl_functions_11_bpl.o gltbx/gl_functions_12_bpl.o gltbx/gl_functions_13_bpl.o gltbx/gl_functions_14_bpl.o gltbx/gl_functions_15_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so.0'->'lib/cctbx_adp_restraints_ext.so.0.0.1' 'lib/cctbx_adp_restraints_ext.so'->'lib/cctbx_adp_restraints_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so.0'->'lib/cctbx_adptbx_ext.so.0.0.1' 'lib/cctbx_adptbx_ext.so'->'lib/cctbx_adptbx_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_xray_scattering_ext.so.0 cctbx/eltbx/boost_python/xray_scattering_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so.0'->'lib/cctbx_math_ext.so.0.0.1' 'lib/cctbx_math_ext.so'->'lib/cctbx_math_ext.so.0.0.1' g++ -o lib/librstbx.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=librstbx.so.0 rstbx/dps_core/dps_core.o rstbx/dps_core/directional_fft.o rstbx/dps_core/direction.o rstbx/indexing_api/indexing_api.o rstbx/diffraction/ewald_sphere.o rstbx/diffraction/partial_spot_position_partial_H.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lcctbx -lm g++ -o lib/iotbx_xplor_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_xplor_ext.so.0 iotbx/xplor/boost_python/xplor_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_xplor -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_attenuation_coefficient_ext.so.0 cctbx/eltbx/boost_python/attenuation_coefficient_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_emma_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_emma_ext.so.0 cctbx/boost_python/emma_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so.0'->'lib/gltbx_viewer_utils_ext.so.0.0.1' 'lib/gltbx_viewer_utils_ext.so'->'lib/gltbx_viewer_utils_ext.so.0.0.1' g++ -o lib/cctbx_covariance_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_covariance_ext.so.0 cctbx/covariance/boost_python/covariance_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so.0'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' 'lib/cctbx_sgtbx_asu_ext.so'->'lib/cctbx_sgtbx_asu_ext.so.0.0.1' g++ -o lib/cctbx_multipolar_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_multipolar_ext.so.0 cctbx/multipolar/aspherical_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so.0'->'lib/cctbx_uctbx_ext.so.0.0.1' 'lib/cctbx_uctbx_ext.so'->'lib/cctbx_uctbx_ext.so.0.0.1' g++ -o lib/cctbx_french_wilson_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_french_wilson_ext.so.0 cctbx/boost_python/french_wilson_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so.0'->'lib/cctbx_crystal_ext.so.0.0.1' 'lib/cctbx_crystal_ext.so'->'lib/cctbx_crystal_ext.so.0.0.1' Create symlinks for: 'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so.0'->'lib/iotbx_xplor_ext.so.0.0.1' 'lib/iotbx_xplor_ext.so'->'lib/iotbx_xplor_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' 'lib/cctbx_eltbx_attenuation_coefficient_ext.so'->'lib/cctbx_eltbx_attenuation_coefficient_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_sasaki_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_sasaki_ext.so.0 cctbx/eltbx/boost_python/sasaki_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_asymmetric_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_asymmetric_map_ext.so.0 cctbx/maptbx/asymmetric_map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lasymmetric_map -liotbx_xplor -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_array_family_flex_ext.so.0 cctbx/array_family/boost_python/flex_ext.o cctbx/array_family/boost_python/flex_hendrickson_lattman.o cctbx/array_family/boost_python/flex_miller_index.o cctbx/array_family/boost_python/flex_xray_scatterer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/librstbx.so.0.0.1' 'lib/librstbx.so.0'->'lib/librstbx.so.0.0.1' 'lib/librstbx.so'->'lib/librstbx.so.0.0.1' g++ -o lib/cctbx_eltbx_henke_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_henke_ext.so.0 cctbx/eltbx/boost_python/henke_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so.0'->'lib/cctbx_emma_ext.so.0.0.1' 'lib/cctbx_emma_ext.so'->'lib/cctbx_emma_ext.so.0.0.1' g++ -o lib/gltbx_fonts_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=gltbx_fonts_ext.so.0 gltbx/fonts_ext.o gltbx/font_ucs_8x13.o gltbx/font_ucs_9x15.o gltbx/font_ucs_10x20.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lGLU -lGL -lm Create symlinks for: 'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so.0'->'lib/cctbx_multipolar_ext.so.0.0.1' 'lib/cctbx_multipolar_ext.so'->'lib/cctbx_multipolar_ext.so.0.0.1' g++ -o lib/cctbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_masks_ext.so.0 cctbx/masks/boost_python/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so.0'->'lib/cctbx_covariance_ext.so.0.0.1' 'lib/cctbx_covariance_ext.so'->'lib/cctbx_covariance_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so.0'->'lib/cctbx_french_wilson_ext.so.0.0.1' 'lib/cctbx_french_wilson_ext.so'->'lib/cctbx_french_wilson_ext.so.0.0.1' g++ -o lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_eltbx_icsd_radii_ext.so.0 cctbx/eltbx/boost_python/icsd_radii_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/cctbx_merging_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_merging_ext.so.0 cctbx/merging/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so.0'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' 'lib/cctbx_eltbx_xray_scattering_ext.so'->'lib/cctbx_eltbx_xray_scattering_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/scaled_adp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so.0'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' 'lib/cctbx_asymmetric_map_ext.so'->'lib/cctbx_asymmetric_map_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so.0'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' 'lib/cctbx_eltbx_henke_ext.so'->'lib/cctbx_eltbx_henke_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/shared.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so.0'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' 'lib/cctbx_eltbx_sasaki_ext.so'->'lib/cctbx_eltbx_sasaki_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/symmetry_equivalent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so.0'->'lib/cctbx_merging_ext.so.0.0.1' 'lib/cctbx_merging_ext.so'->'lib/cctbx_merging_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so.0'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' 'lib/cctbx_eltbx_icsd_radii_ext.so'->'lib/cctbx_eltbx_icsd_radii_ext.so.0.0.1' Create symlinks for: 'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so.0'->'lib/gltbx_gl_ext.so.0.0.1' 'lib/gltbx_gl_ext.so'->'lib/gltbx_gl_ext.so.0.0.1' Create symlinks for: 'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so.0'->'lib/gltbx_fonts_ext.so.0.0.1' 'lib/gltbx_fonts_ext.so'->'lib/gltbx_fonts_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/u_eq_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/u_iso_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so.0'->'lib/cctbx_masks_ext.so.0.0.1' 'lib/cctbx_masks_ext.so'->'lib/cctbx_masks_ext.so.0.0.1' g++ -o mmtbx/alignment/alignment_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/alignment/alignment_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so.0'->'lib/cctbx_xray_ext.so.0.0.1' 'lib/cctbx_xray_ext.so'->'lib/cctbx_xray_ext.so.0.0.1' g++ -o mmtbx/building/loop_closure/ccd_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/building/loop_closure/ccd_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so.0'->'lib/cctbx_miller_ext.so.0.0.1' 'lib/cctbx_miller_ext.so'->'lib/cctbx_miller_ext.so.0.0.1' g++ -o mmtbx/bulk_solvent/bulk_solvent_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/bulk_solvent/bulk_solvent_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/bulk_solvent/bulk_solvent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/bulk_solvent/bulk_solvent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so.0'->'lib/cctbx_array_family_flex_ext.so.0.0.1' 'lib/cctbx_array_family_flex_ext.so'->'lib/cctbx_array_family_flex_ext.so.0.0.1' g++ -o mmtbx/den/boost_python/den_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/den/boost_python/den_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/secondary_structure/dssp_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/secondary_structure/dssp_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/dynamics/dynamics_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/dynamics/dynamics_ext.cpp g++ -o lib/iotbx_shelx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_shelx_ext.so.0 iotbx/shelx/shelx_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/dynamics/dynamics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/dynamics/dynamics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/f_model/f_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/f_model/f_model_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so.0'->'lib/iotbx_shelx_ext.so.0.0.1' 'lib/iotbx_shelx_ext.so'->'lib/iotbx_shelx_ext.so.0.0.1' Create symlinks for: 'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so.0'->'lib/cctbx_sgtbx_ext.so.0.0.1' 'lib/cctbx_sgtbx_ext.so'->'lib/cctbx_sgtbx_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/asa_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/asa_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so.0'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' 'lib/cctbx_geometry_restraints_ext.so'->'lib/cctbx_geometry_restraints_ext.so.0.0.1' g++ -o mmtbx/geometry/boost_python/clash_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/clash_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libspotfinder.so.0 spotfinder/core_toolbox/spot.o spotfinder/core_toolbox/libdistl.o spotfinder/core_toolbox/hough.o spotfinder/core_toolbox/distl.o spotfinder/core_toolbox/spotfilter.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lann-cctbx -lomptbx -lm g++ -o mmtbx/geometry/boost_python/indexing_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/geometry/boost_python/primitive_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/primitive_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/geometry/boost_python/shared_types_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/sphere_surface_sampling_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so.0'->'lib/libspotfinder.so.0.0.1' 'lib/libspotfinder.so'->'lib/libspotfinder.so.0.0.1' g++ -o lib/libdxtbxspotfinder.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libdxtbxspotfinder.so.0 spotfinder/dxtbx_toolbox/libdistl.o spotfinder/dxtbx_toolbox/distl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lspotfinder -lann-cctbx -lomptbx -lm Create symlinks for: 'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so.0'->'lib/libdxtbxspotfinder.so.0.0.1' 'lib/libdxtbxspotfinder.so'->'lib/libdxtbxspotfinder.so.0.0.1' g++ -o mmtbx/hydrogens/hydrogens_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/hydrogens/hydrogens_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/masks/masks_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/masks/masks_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/max_lik/max_lik_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/max_lik/max_lik_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/max_lik/max_lik.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/max_lik/max_lik.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/bulk_solvent/mosaic_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/bulk_solvent/mosaic_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/ncs/cartesian_restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/ncs/cartesian_restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/ncs/tncs_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/ncs/tncs_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/pair_interaction/interaction_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/pair_interaction/interaction_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/probe/boost_python/probe_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/probe/boost_python/probe_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/probe/Scoring.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/probe/Scoring.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/probe/DotSpheres.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/probe/DotSpheres.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/probe/SpatialQuery.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/probe/SpatialQuery.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized] 905 | type_list.append(object(handle<>(PyObject_Type(object(a).ptr())))); | ^~~~~~~~~ In file included from /usr/include/boost/python/args.hpp:22, from /usr/include/boost/python.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/boost_python/scan.cc:11: /usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec2&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec2]’ declared here 246 | explicit object(T const& x) | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here 904 | typename U::value_type a = typename U::value_type(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h: In function ‘void dxtbx::af::flex_table_suite::type_appender::operator()(U) [with U = scitbx::af::shared >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:905:54: warning: ‘a’ may be used uninitialized [-Wmaybe-uninitialized] 905 | type_list.append(object(handle<>(PyObject_Type(object(a).ptr())))); | ^~~~~~~~~ /usr/include/boost/python/object_core.hpp:246:16: note: by argument 2 of type ‘const scitbx::vec3&’ to ‘boost::python::api::object::object(const T&) [with T = scitbx::vec3]’ declared here 246 | explicit object(T const& x) | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table_suite.h:904:30: note: ‘a’ declared here 904 | typename U::value_type a = typename U::value_type(); | ^ g++ -o mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/reduce/boost_python/reduce_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/reduce/boost_python/reduce_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/reduce/PositionReturn.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/reduce/PositionReturn.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/libsmtbx_refinement_constraints.so.0.0.1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread -shared -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -Wl,-soname=libsmtbx_refinement_constraints.so.0 smtbx/refinement/constraints/affine.o smtbx/refinement/constraints/geometrical_hydrogens.o smtbx/refinement/constraints/occupancy.o smtbx/refinement/constraints/reparametrisation.o smtbx/refinement/constraints/rigid.o smtbx/refinement/constraints/same_group.o smtbx/refinement/constraints/scaled_adp.o smtbx/refinement/constraints/shared.o smtbx/refinement/constraints/special_position.o smtbx/refinement/constraints/symmetry_equivalent.o smtbx/refinement/constraints/u_eq_dependent_u_iso.o smtbx/refinement/constraints/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o mmtbx/reduce/InteractionGraph.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/reduce/InteractionGraph.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/reduce/Optimizers.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/reduce/Optimizers.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:23: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table::insert_visitor::operator()(T&) const [with T = scitbx::af::shared >; VarientType = boost::variant, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/scan.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec2&’ to ‘void scitbx::af::shared_plain::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec2]’ declared here 124 | void insert(ElementType* pos, size_type const& n, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘’ declared here 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ^~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h: In member function ‘void dxtbx::af::flex_table::insert_visitor::operator()(T&) const [with T = scitbx::af::shared >; VarientType = boost::variant, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_item, scitbx::af::shared >, boost::mpl::l_end> > > > > > > >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:17: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:124:12: note: by argument 4 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::insert(ElementType*, const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 124 | void insert(ElementType* pos, size_type const& n, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/array_family/flex_table.h:218:50: note: ‘’ declared here 218 | v.insert(v.begin() + pos, n, typename T::value_type()); | ^~~~~~~~~~~~ Create symlinks for: 'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so.0'->'lib/libsmtbx_refinement_constraints.so.0.0.1' 'lib/libsmtbx_refinement_constraints.so'->'lib/libsmtbx_refinement_constraints.so.0.0.1' g++ -o mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/den/den.h:2, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/den/boost_python/den_ext.cpp:12: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o mmtbx/rotamer/fit_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/rotamer/fit_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/shared_types_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::den::den_simple_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/den/boost_python/den_ext.cpp:53:78: required from here 53 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 54 | "shared_den_simple_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o mmtbx/rsr/rsr_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/rsr/rsr_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/scaling/scaling_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/scaling/scaling_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o mmtbx/scaling/twinning_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/scaling/twinning_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_dynamics_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dynamics_ext.so.0 mmtbx/dynamics/dynamics_ext.o mmtbx/dynamics/dynamics.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so.0'->'lib/mmtbx_dynamics_ext.so.0.0.1' 'lib/mmtbx_dynamics_ext.so'->'lib/mmtbx_dynamics_ext.so.0.0.1' g++ -o mmtbx/scaling/relative_scaling_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/scaling/relative_scaling_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/cctbx_maptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=cctbx_maptbx_ext.so.0 cctbx/maptbx/boost_python/maptbx_ext.o cctbx/maptbx/boost_python/grid_indices_around_sites.o cctbx/maptbx/boost_python/grid_tags.o cctbx/maptbx/boost_python/gridding.o cctbx/maptbx/boost_python/misc.o cctbx/maptbx/boost_python/peak_search.o cctbx/maptbx/boost_python/pymol_interface.o cctbx/maptbx/boost_python/statistics.o cctbx/maptbx/boost_python/structure_factors.o cctbx/maptbx/boost_python/coordinate_transformers.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/object_manager.hpp:8, from /usr/include/boost/python/extract.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/indexing_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/asa_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_geometry_primitive_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_primitive_ext.so.0 mmtbx/geometry/boost_python/primitive_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/libiotbx_pdb.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libiotbx_pdb.so.0 iotbx/pdb/hybrid_36_c.o iotbx/pdb/hybrid_36_cpp.o iotbx/pdb/utils.o iotbx/pdb/write_utils.o iotbx/pdb/hierarchy.o iotbx/pdb/hierarchy_select.o iotbx/pdb/hierarchy_atoms.o iotbx/pdb/construct_hierarchy.o iotbx/pdb/overall_counts.o iotbx/pdb/hierarchy_write.o iotbx/pdb/atom_selection.o iotbx/pdb/input.o iotbx/pdb/input_write.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system Create symlinks for: 'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so.0'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' 'lib/mmtbx_geometry_primitive_ext.so'->'lib/mmtbx_geometry_primitive_ext.so.0.0.1' g++ -o lib/mmtbx_alignment_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_alignment_ext.so.0 mmtbx/alignment/alignment_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o mmtbx/scaling/outlier_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/scaling/outlier_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/function/detail/requires_cxx11.hpp:9, from /usr/include/boost/function/detail/prologue.hpp:12, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/converter/arg_to_python_base.hpp:7, from /usr/include/boost/python/converter/arg_to_python.hpp:14, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry/boost_python/clash_ext.cpp:2: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so.0'->'lib/mmtbx_alignment_ext.so.0.0.1' 'lib/mmtbx_alignment_ext.so'->'lib/mmtbx_alignment_ext.so.0.0.1' g++ -o mmtbx/secondary_structure/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/ccp4 -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/secondary_structure/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so.0'->'lib/libiotbx_pdb.so.0.0.1' 'lib/libiotbx_pdb.so'->'lib/libiotbx_pdb.so.0.0.1' g++ -o lib/iotbx_pdb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_ext.so.0 iotbx/pdb/ext.o iotbx/pdb/hybrid_36_bpl.o iotbx/pdb/common_residue_names_bpl.o iotbx/pdb/rna_dna_atom_names_bpl.o iotbx/pdb/input_bpl.o iotbx/pdb/xray_structure_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_geometry_shared_types_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_shared_types_ext.so.0 mmtbx/geometry/boost_python/shared_types_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so.0'->'lib/cctbx_maptbx_ext.so.0.0.1' 'lib/cctbx_maptbx_ext.so'->'lib/cctbx_maptbx_ext.so.0.0.1' g++ -o lib/mmtbx_dssp_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_dssp_ext.so.0 mmtbx/secondary_structure/dssp_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so.0'->'lib/iotbx_pdb_ext.so.0.0.1' 'lib/iotbx_pdb_ext.so'->'lib/iotbx_pdb_ext.so.0.0.1' Create symlinks for: 'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so.0'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' 'lib/mmtbx_geometry_shared_types_ext.so'->'lib/mmtbx_geometry_shared_types_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/xray/scatterer.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/restraints.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/ramachandran.h:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i'lib/mmtbx_dssp_ext.so.0.0.1' 'lib/mmtbx_dssp_ext.so'->'lib/mmtbx_dssp_ext.so.0.0.1' g++ -o mmtbx/tls/optimise_amplitudes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/optimise_amplitudes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/iotbx_mtz_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_mtz_ext.so.0 iotbx/mtz/ext.o iotbx/mtz/object_bpl.o iotbx/mtz/crystal_bpl.o iotbx/mtz/dataset_bpl.o iotbx/mtz/column_bpl.o iotbx/mtz/batch_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_mtz -lcctbx -lccp4io -lccp4c -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/ramachandran.h: In instantiation of ‘scitbx::af::tiny mmtbx::geometry_restraints::target_phi_psi(const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const scitbx::af::const_ref, scitbx::af::trivial_accessor>&, const phi_psi_proxy&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/ramachandran.h:314:35: required from here 314 | r = target_phi_psi(general_table, sites_cart, proxy);} | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/ramachandran.h:269:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 269 | for(int i=0; i, scitbx::af::trivial_accessor>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 284 | for(int i=0; i::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/format/parsing.hpp:21, from /usr/include/boost/format.hpp:50, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/dihedral.h:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::phi_psi_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/ramachandran_ext.cpp:52:75: required from here 52 | scitbx::af::boost_python::shared_wrapper::wrap( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 53 | "shared_phi_psi_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/libmmtbx_masks.so.0.0.1 -shared -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -Wl,-soname=libmmtbx_masks.so.0 mmtbx/masks/atom_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm g++ -o lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_sphere_surface_sampling_ext.so.0 mmtbx/geometry/boost_python/sphere_surface_sampling_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/wyckoff.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/sym_equiv_sites.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/crystal/direct_space_asu.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/asu_cache.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/bond.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/reference_coordinate.h:2, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:13: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h: In member function ‘bool cctbx::sgtbx::site_symmetry_ops::contains(const cctbx::sgtbx::rt_mx&) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:100:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i'lib/iotbx_mtz_ext.so.0.0.1' 'lib/iotbx_mtz_ext.so'->'lib/iotbx_mtz_ext.so.0.0.1' g++ -o mmtbx/tls/optimise_amplitudes_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/optimise_amplitudes_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' 'lib/mmtbx_geometry_sphere_surface_sampling_ext.so'->'lib/mmtbx_geometry_sphere_surface_sampling_ext.so.0.0.1' g++ -o mmtbx/tls/utils.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/utils.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so.0'->'lib/libmmtbx_masks.so.0.0.1' 'lib/libmmtbx_masks.so'->'lib/libmmtbx_masks.so.0.0.1' g++ -o mmtbx/tls/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/tls/utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:14: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/proxy_select.h: In instantiation of ‘scitbx::af::shared cctbx::geometry_restraints::shared_proxy_remove(const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with ProxyType = mmtbx::geometry_restraints::reference_coordinate_proxy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:80:41: required from here 80 | cctbx::geometry_restraints::shared_proxy_remove, ( | ^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/geometry_restraints/proxy_select.h:187:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 187 | if (match_ctr != i_seqs.size()) { | ~~~~~~~~~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_3; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:203:75: required from here 203 | new tensor_rank_3_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h: In instantiation of ‘void cctbx::sgtbx::tensors::constraints::initialize(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:47:5: required from ‘cctbx::sgtbx::tensors::constraints::constraints(const scitbx::af::const_ref&, std::size_t, bool) [with FloatType = double; tensor_t = scitbx::matrix::tensors::tensor_rank_4; std::size_t = long unsigned int]’ 47 | initialize(symmetry_matrices, i_first_matrix_to_use, reciprocal_space); | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:214:75: required from here 214 | new tensor_rank_4_constraints_t(matrices_.const_ref(), 1, true)); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensors.h:185:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 185 | for (int j = 0; j < tensor_t::size(); j++) { | ~~^~~~~~~~~~~~~~~~~~ g++ -o mmtbx/utils/utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/utils/utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:23, from /usr/include/boost/shared_array.hpp:17, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/tensor_rank_2.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/cctbx/sgtbx/site_symmetry.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = mmtbx::geometry_restraints::reference_coordinate_proxy; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.cpp:61:25: required from here 61 | shared_w_t::wrap( | ~~~~~~~~~~~~~~~~^ 62 | "shared_reference_coordinate_proxy") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o mmtbx/validation/ramachandran/rama_eval_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/validation/ramachandran/rama_eval_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/iotbx_detectors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_detectors_ext.so.0 iotbx/detectors/detectors_ext.o iotbx/detectors/image_divider.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_building_loop_closure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_building_loop_closure_ext.so.0 mmtbx/building/loop_closure/ccd_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -liotbx_pdb -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so.0'->'lib/iotbx_detectors_ext.so.0.0.1' 'lib/iotbx_detectors_ext.so'->'lib/iotbx_detectors_ext.so.0.0.1' g++ -o omptbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/omptbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so.0'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' 'lib/mmtbx_building_loop_closure_ext.so'->'lib/mmtbx_building_loop_closure_ext.so.0.0.1' g++ -o rstbx/array_family/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/array_family/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_cartesian_restraints_ext.so.0 mmtbx/ncs/cartesian_restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so.0'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' 'lib/mmtbx_ncs_cartesian_restraints_ext.so'->'lib/mmtbx_ncs_cartesian_restraints_ext.so.0.0.1' g++ -o rstbx/array_family/flex_rstbx_arrays.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/array_family/flex_rstbx_arrays.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/bandpass/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/bandpass/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/src -Irstbx/bandpass/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/bpcx/detector_model/detector_model_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/detector_model/detector_model_ext.cpp g++ -o lib/mmtbx_secondary_structure_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_secondary_structure_ext.so.0 mmtbx/secondary_structure/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so.0'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' 'lib/mmtbx_secondary_structure_ext.so'->'lib/mmtbx_secondary_structure_ext.so.0.0.1' g++ -o rstbx/bpcx/detector_model/sensor.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/bpcx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/src -Irstbx/bpcx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/detector_model/sensor.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_hydrogens_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_hydrogens_ext.so.0 mmtbx/hydrogens/hydrogens_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so.0'->'lib/mmtbx_hydrogens_ext.so.0.0.1' 'lib/mmtbx_hydrogens_ext.so'->'lib/mmtbx_hydrogens_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec2.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/detector_model/sensor.h:3, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bpcx/detector_model/sensor.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o rstbx/diffraction/fastbragg/fastbragg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_mosaic_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_mosaic_ext.so.0 mmtbx/bulk_solvent/mosaic_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so.0'->'lib/mmtbx_mosaic_ext.so.0.0.1' 'lib/mmtbx_mosaic_ext.so'->'lib/mmtbx_mosaic_ext.so.0.0.1' g++ -o rstbx/diffraction/fastbragg/fastbragg.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/diffraction/fastbragg/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/src -Irstbx/diffraction/fastbragg/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/src -Irstbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_den_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_den_restraints_ext.so.0 mmtbx/den/boost_python/den_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so.0'->'lib/mmtbx_den_restraints_ext.so.0.0.1' 'lib/mmtbx_den_restraints_ext.so'->'lib/mmtbx_den_restraints_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o rstbx/indexing_api/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/indexing_api/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/src -Irstbx/indexing_api/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_f_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_f_model_ext.so.0 mmtbx/f_model/f_model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so.0'->'lib/mmtbx_f_model_ext.so.0.0.1' 'lib/mmtbx_f_model_ext.so'->'lib/mmtbx_f_model_ext.so.0.0.1' g++ -o rstbx/apps/integration_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/apps/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/src -Irstbx/apps/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/integration_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/simage/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/simage/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/src -Irstbx/simage/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/simulation/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/simulation/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/src -Irstbx/simulation/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o rstbx/symmetry/constraints/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -Irstbx/symmetry/constraints/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/symmetry/constraints/src -Irstbx/symmetry/constraints/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/symmetry/constraints/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/symmetry/constraints/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_ncs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ncs_ext.so.0 mmtbx/ncs/tncs_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm ar rc probe/lib/libprobelib.a mmtbx/probe/Scoring.o mmtbx/probe/DotSpheres.o mmtbx/probe/SpatialQuery.o ranlib probe/lib/libprobelib.a g++ -o scitbx/array_family/boost_python/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp g++ -o lib/omptbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=omptbx_ext.so.0 omptbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lomptbx -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so.0'->'lib/omptbx_ext.so.0.0.1' 'lib/omptbx_ext.so'->'lib/omptbx_ext.so.0.0.1' Create symlinks for: 'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so.0'->'lib/mmtbx_ncs_ext.so.0.0.1' 'lib/mmtbx_ncs_ext.so'->'lib/mmtbx_ncs_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_grid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_grid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/flex_bool.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h: In constructor ‘rstbx::bandpass::active_area_filter::active_area_filter(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h:100:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | for (int i=0; i < tiles.size()/4; ++i){ | ~~^~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h: In member function ‘bool rstbx::bandpass::active_area_filter::operator()(rstbx::bandpass::vec3, const int&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h:126:39: warning: comparison of integer expressions of different signedness: ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ~~~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/parameters.h:126:9: note: in expansion of macro ‘SCITBX_ASSERT’ 126 | SCITBX_ASSERT( adapt.nn.size()== NEAR); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/subpixel_joint_model.h: In member function ‘void rstbx::bandpass::subpixel_joint_model::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/subpixel_joint_model.h:26:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 26 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/subpixel_joint_model.h:31:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 31 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::prescreen_indices(const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:46:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared rstbx::bandpass::use_case_bp3::selected_partialities() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:93:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:152:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 152 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::picture_fast_slow_force()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:296:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 296 | for (int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:462:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 462 | for ( int idx = 0; idx < P.indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectangles(rstbx::bandpass::vec3ref)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:477:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 477 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::spot_rectregions(rstbx::bandpass::vec3ref, const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:511:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 511 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::enclosed_pixels() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:543:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 543 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hi_predictions() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:752:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 752 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_lo_predictions() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:763:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 763 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:774:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 774 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_predictions_labelit_format() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:787:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 787 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::selected_hkls() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:802:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 802 | for (int idx = 0; idx < lo_E_limit.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘scitbx::af::shared > rstbx::bandpass::use_case_bp3::restricted_to_active_areas(scitbx::af::shared, scitbx::af::shared >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:815:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 815 | for (int idx = 0; idx < active_areas.size(); idx+=4){ | ~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In member function ‘void rstbx::bandpass::use_case_bp3::set_subpixel(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:828:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 828 | for (int ixx=0; ixx< rotations_deg.size(); ++ixx){ //DEPRECATED | ~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In function ‘scitbx::af::shared > rstbx::bandpass::ext::use_case_bp2_picture_fast_slow(scitbx::af::shared >, const cctbx::crystal_orientation&, const scitbx::vec3&, const double&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const scitbx::vec3&, const double&, const scitbx::vec3&, const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:933:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 933 | for (int idx = 0; idx < indices.size(); ++idx){ | ~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = resolution_limited_pixel_accept_policy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:616:87: required from here 616 | enclosed_pixels_and_margin_pixels_detail(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp: In instantiation of ‘void rstbx::bandpass::use_case_bp3::enclosed_pixels_and_margin_pixels_detail() [with pixel_accept_policy = unlimited_pixel_accept_policy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:620:78: required from here 620 | enclosed_pixels_and_margin_pixels_detail(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:631:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int idx = 0; idx < spot_rectangle_vertices.size(); idx+=5){ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_masks_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_masks_ext.so.0 mmtbx/masks/masks_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_masks -lcctbx_sgtbx_asu -lcctbx -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/mmtbx_rsr_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rsr_ext.so.0 mmtbx/rsr/rsr_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so.0'->'lib/mmtbx_masks_ext.so.0.0.1' 'lib/mmtbx_masks_ext.so'->'lib/mmtbx_masks_ext.so.0.0.1' g++ -o lib/mmtbx_tls_decompose_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_decompose_ext.so.0 mmtbx/tls/decompose_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so.0'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' 'lib/mmtbx_tls_decompose_ext.so'->'lib/mmtbx_tls_decompose_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_size_t.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::versa > rstbx::diffraction::fastbragg::detector::intdata()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:89:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int count = 0; count < raw.size(); ++count){ | ~~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘scitbx::af::shared rstbx::diffraction::fastbragg::camera::get_wavelengths() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 133 | SCITBX_ASSERT(result.size()==dispsteps); | ~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:133:5: note: in expansion of macro ‘SCITBX_ASSERT’ 133 | SCITBX_ASSERT(result.size()==dispsteps); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘std::map, double> rstbx::diffraction::fastbragg::crystal::get_amplitude_mapping() const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:176:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 176 | for (int i = 0; i < miller.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In member function ‘void rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector(const bool&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:305:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so.0'->'lib/mmtbx_rsr_ext.so.0.0.1' 'lib/mmtbx_rsr_ext.so'->'lib/mmtbx_rsr_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_float.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = scitbx::vec3; MillerConversionPolicy = rstbx::diffraction::fastbragg::vec3_double_miller_index_policy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:134:11: required from here 127 | class_("fast_bragg_simulation",init<>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | | 129 | .def("set_detector",&fast_bragg_simulation::set_detector) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("set_camera",&fast_bragg_simulation::set_camera) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("set_crystal",&fast_bragg_simulation::set_crystal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("sweep_over_detector",&fast_bragg_simulation::sweep_over_detector, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def("sweep_over_detector_float_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 | rstbx::diffraction::fastbragg::vec3, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 | rstbx::diffraction::fastbragg::vec3_double_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h: In instantiation of ‘scitbx::af::shared rstbx::diffraction::fastbragg::fast_bragg_simulation::sweep_over_detector_get_indices(const bool&) [with IndexType = cctbx::miller::index<>; MillerConversionPolicy = rstbx::diffraction::fastbragg::integer_miller_index_policy]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg_ext.cpp:138:11: required from here 127 | class_("fast_bragg_simulation",init<>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 | | 129 | .def("set_detector",&fast_bragg_simulation::set_detector) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 | .def("set_camera",&fast_bragg_simulation::set_camera) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 | .def("set_crystal",&fast_bragg_simulation::set_crystal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | .def("sweep_over_detector",&fast_bragg_simulation::sweep_over_detector, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 134 | .def("sweep_over_detector_float_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 | rstbx::diffraction::fastbragg::vec3, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 | rstbx::diffraction::fastbragg::vec3_double_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ 138 | .def("sweep_over_detector_integer_indices",&fast_bragg_simulation::sweep_over_detector_get_indices< | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 | rstbx::diffraction::fastbragg::miller_t, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 | rstbx::diffraction::fastbragg::integer_miller_index_policy>, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 | (arg_("verbose")=false)) | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/diffraction/fastbragg/fastbragg.h:456:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 456 | for(int i_lambda=0; i_lambda < lambdas.size(); ++i_lambda){ | ~~~~~~~~~^~~~~~~~~~~~~~~~ g++ -o lib/dxtbx_model_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_model_ext.so.0 dxtbx/src/dxtbx/model/boost_python/beam.o dxtbx/src/dxtbx/model/boost_python/spectrum.o dxtbx/src/dxtbx/model/boost_python/goniometer.o dxtbx/src/dxtbx/model/boost_python/kappa_goniometer.o dxtbx/src/dxtbx/model/boost_python/multi_axis_goniometer.o dxtbx/src/dxtbx/model/boost_python/panel.o dxtbx/src/dxtbx/model/boost_python/detector.o dxtbx/src/dxtbx/model/boost_python/scan.o dxtbx/src/dxtbx/model/boost_python/scan_helpers.o dxtbx/src/dxtbx/model/boost_python/crystal.o dxtbx/src/dxtbx/model/boost_python/parallax_correction.o dxtbx/src/dxtbx/model/boost_python/pixel_to_millimeter.o dxtbx/src/dxtbx/model/boost_python/experiment.o dxtbx/src/dxtbx/model/boost_python/experiment_list.o dxtbx/src/dxtbx/model/boost_python/model_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 g++ -o lib/mmtbx_max_lik_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_max_lik_ext.so.0 mmtbx/max_lik/max_lik_ext.o mmtbx/max_lik/max_lik.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/array_family/boost_python/flex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so.0'->'lib/mmtbx_max_lik_ext.so.0.0.1' 'lib/mmtbx_max_lik_ext.so'->'lib/mmtbx_max_lik_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_double_matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp g++ -o lib/mmtbx_pair_interaction_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_pair_interaction_ext.so.0 mmtbx/pair_interaction/interaction_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so.0'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' 'lib/mmtbx_pair_interaction_ext.so'->'lib/mmtbx_pair_interaction_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_complex_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_validation_ramachandran_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_validation_ramachandran_ext.so.0 mmtbx/validation/ramachandran/rama_eval_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so.0'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' 'lib/mmtbx_validation_ramachandran_ext.so'->'lib/mmtbx_validation_ramachandran_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_std_string.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_reference_coordinate_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reference_coordinate_ext.so.0 mmtbx/geometry_restraints/boost_python/reference_coordinate_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so.0'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' 'lib/mmtbx_reference_coordinate_ext.so'->'lib/mmtbx_reference_coordinate_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_random.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_optimise_amplitudes_ext.so.0 mmtbx/tls/optimise_amplitudes.o mmtbx/tls/optimise_amplitudes_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so.0'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' 'lib/mmtbx_tls_optimise_amplitudes_ext.so'->'lib/mmtbx_tls_optimise_amplitudes_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_sort.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sort.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_rotamer_fit_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_rotamer_fit_ext.so.0 mmtbx/rotamer/fit_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/ext.cpp:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::shared rstbx::xfel1::select_proximal_indices(const int&, const double&, const double&, const cctbx::crystal_orientation&, const double&, const double&, const double&, const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int x = 0; x < indices_all.size(); ++x){ | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h: In member function ‘scitbx::af::versa > rstbx::xfel1::raw_diffraction(scitbx::af::shared, scitbx::af::versa >, const size_t&, const double&, const double&, const double&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h:178:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const size_t’ {aka ‘const long unsigned int’} [-Wsign-compare] 178 | for (int mcount=0; mcount::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 230 | for (int isel = 0; isel < selected.size(); ++isel){ | ~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h:231:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 231 | for (int imos = 0; imos < mosaic_perturbations.size(); ++imos){ | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/libdistl.h:81, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/distl.h:14, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/integration_ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/scanbox.h: In member function ‘Distl::interval_list Distl::scanbox_tiling_explicit::generate_defined_x_tiles(const int&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/iotbx/detectors/scanbox.h:268:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 268 | for (int tile = 0 ; tile < tile_count; ++tile){ | ~~~~~^~~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so.0'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' 'lib/mmtbx_rotamer_fit_ext.so'->'lib/mmtbx_rotamer_fit_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::append_ISmask(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:222:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 222 | for (int i=0; i < mask.size(); i+=2){ | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h: In member function ‘void rstbx::integration::simple_integration::positional_correction_mapping(scitbx::af::shared >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:273:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 273 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 287 | for (int p=0; p >, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:310:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 310 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 320 | for (int p=0; p > rstbx::integration::simple_integration::safe_background(const scitbx::af::flex_int&, scitbx::af::shared >, const annlib_adaptbx::AnnAdaptor&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:366:30: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 366 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 378 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 395 | for (int i=0; i >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 495 | for (int isort=0; isort >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 550 | for (int i=0; i >, scitbx::af::shared >, scitbx::af::shared >)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/apps/stills/simple_integration.h:575:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 575 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 631 | for (int k=0; k::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 638 | for (int k=0; k'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' 'lib/rstbx_bpcx_detector_model_ext.so'->'lib/rstbx_bpcx_detector_model_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/flex_mean_and_variance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mean_and_variance.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/real_to_complex.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/directional_fft.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/dps_core/dps_core.h:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/indexing_api.h:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp: In member function ‘const char* scitbx::af::boost_python::cost_of_m_handle_in_af_shared::operator()(unsigned int, unsigned int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:367:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 367 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:375:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 375 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:383:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 383 | for(int n=0; n < n_repeats; ++n) { | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:22, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/detector.h:25, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/indexing_api.h:11: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:288:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 288 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:289:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 289 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:328:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 328 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:329:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 329 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_millimeter(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:408:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 408 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:409:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 409 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h: In member function ‘virtual scitbx::vec2 dxtbx::model::OffsetParallaxCorrectedPxMmStrategy::to_pixel(const dxtbx::model::PanelData&, scitbx::vec2) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:449:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 449 | if (i >= dx_.accessor()[1]) i = dx_.accessor()[1] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/pixel_to_millimeter.h:450:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const long unsigned int’ [-Wsign-compare] 450 | if (j >= dx_.accessor()[0]) j = dx_.accessor()[0] - 1; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h: In member function ‘void dxtbx::model::Panel::apply_untrusted_rectangle_mask(scitbx::af::ref >) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:367:36: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (std::size_t y = y0; y < y1; ++y) { | ~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src/dxtbx/model/panel.h:368:38: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 368 | for (std::size_t x = x0; x < x1; ++x) { | ~~^~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/selections.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/selections.h: In instantiation of ‘scitbx::af::shared scitbx::af::reindexing_array(std::size_t, const const_ref&) [with IntType = int; std::size_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:544:7: required from here 544 | reindexing_array, | ^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/selections.h:156:35: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 156 | SCITBX_ASSERT(iselection[i] < selectee_size); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/selections.h:156:7: note: in expansion of macro ‘SCITBX_ASSERT’ 156 | SCITBX_ASSERT(iselection[i] < selectee_size); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/ext.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/image_simple.hpp: In member function ‘rstbx::simage::image_simple& rstbx::simage::image_simple::compute(const cctbx::uctbx::unit_cell&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const scitbx::mat3&, double, double, int, double, scitbx::vec2, scitbx::vec2, unsigned int, double)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/image_simple.hpp:144:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 144 | for(int i=0;i<=point_spread;i++) { | ~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/image_simple.hpp:148:28: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 148 | for(int j=0;j<=point_spread;j++) { | ~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘void indexing_api::rayleigh_cpp::estimate_parameters_from_cdf(scitbx::af::shared, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:59:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 59 | for (int i=0; i < x_data.size(); ++i){ | ~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::pdf(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:80:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 80 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::cdf(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:96:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 96 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::d_cdf_d_sigma(scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:113:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 113 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp: In member function ‘scitbx::af::shared indexing_api::rayleigh_cpp::gradients(scitbx::af::shared, const int&, scitbx::af::shared)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:129:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 129 | for (int i = 0; i < x.size(); ++i){ | ~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/indexing_api/ext.cpp:135:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 135 | for (int i = 0; i < gradients.size(); ++i){ | ~~^~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/image_simple.hpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/ext.cpp: In function ‘std::string rstbx::simage::ext::combine_rgb_images(const boost::python::list&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simage/ext.cpp:58:42: warning: comparison of integer expressions of different signedness: ‘boost::python::ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 58 | TBXX_ASSERT(bp::len(rgb_images[j]) == img_size); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/tbxx/error_utils.hpp:59:9: note: in definition of macro ‘TBXX_ASSERT’ 59 | if (!(condition)) { \ | ^~~~~~~~~ g++ -o lib/mmtbx_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_utils_ext.so.0 mmtbx/utils/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so.0'->'lib/dxtbx_model_ext.so.0.0.1' 'lib/dxtbx_model_ext.so'->'lib/dxtbx_model_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/c_grid_flex_conversions.h:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:10: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:84:46: required from here 84 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:85:45: required from here 85 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:86:36: required from here 86 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:87:36: required from here 87 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:88:36: required from here 88 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:89:36: required from here 89 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:90:37: required from here 90 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:91:39: required from here 91 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:92:39: required from here 92 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:93:39: required from here 93 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:94:39: required from here 94 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:95:39: required from here 95 | tuple_mapping_fixed_size(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:96:53: required from here 96 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:97:53: required from here 97 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:98:53: required from here 98 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:100:50: required from here 100 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:101:51: required from here 101 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:102:55: required from here 102 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:103:55: required from here 103 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:104:55: required from here 104 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:105:58: required from here 105 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:106:53: required from here 106 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:107:53: required from here 107 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:108:53: required from here 108 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:110:54: required from here 110 | tuple_mapping_fixed_capacity >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:112:46: required from here 112 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:113:46: required from here 113 | tuple_mapping_fixed_size >(); // scitbx/math/golay.h | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:115:49: required from here 115 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:117:50: required from here 117 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:118:50: required from here 118 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:119:50: required from here 119 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:120:50: required from here 120 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:122:53: required from here 122 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:123:53: required from here 123 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:124:53: required from here 124 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:127:51: required from here 127 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:128:52: required from here 128 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:129:42: required from here 129 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_median.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:130:42: required from here 130 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:131:45: required from here 131 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:132:63: required from here 132 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:133:45: required from here 133 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat3; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat3]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:134:49: required from here 134 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:135:51: required from here 135 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:136:52: required from here 136 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:137:42: required from here 137 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:138:42: required from here 138 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so.0'->'lib/mmtbx_utils_ext.so.0.0.1' 'lib/mmtbx_utils_ext.so'->'lib/mmtbx_utils_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:139:45: required from here 139 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:140:45: required from here 140 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::sym_mat2; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::sym_mat2]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:141:49: required from here 141 | tuple_mapping_fixed_size >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/mmtbx_geometry_indexing_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_indexing_ext.so.0 mmtbx/geometry/boost_python/indexing_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::vec3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::vec3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:143:60: required from here 143 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::mat3 >; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::mat3 >]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:144:60: required from here 144 | tuple_mapping_fixed_size > >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:146:54: required from here 146 | tuple_mapping_fixed_size, 2> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:147:54: required from here 147 | tuple_mapping_fixed_size, 3> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:148:54: required from here 148 | tuple_mapping_fixed_size, 4> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 2>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:149:54: required from here 149 | tuple_mapping_fixed_size, 2> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 3>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:150:54: required from here 150 | tuple_mapping_fixed_size, 3> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::tiny, 4>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:280:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_size::tuple_mapping_fixed_size() [with ContainerType = scitbx::af::tiny, 4>]’ 280 | tuple_mapping< | ^~~~~~~~~~~~~~ 281 | ContainerType, | ~~~~~~~~~~~~~~ 282 | fixed_size_policy>(); | ~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:151:54: required from here 151 | tuple_mapping_fixed_size, 4> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:153:64: required from here 153 | tuple_mapping_fixed_capacity(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 3>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 3>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:154:56: required from here 154 | tuple_mapping_fixed_capacity, 3> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 2>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 2>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:155:56: required from here 155 | tuple_mapping_fixed_capacity, 2> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 6>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 6>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:156:59: required from here 156 | tuple_mapping_fixed_capacity, 6> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 7>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 7>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:157:59: required from here 157 | tuple_mapping_fixed_capacity, 7> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:158:59: required from here 158 | tuple_mapping_fixed_capacity, 8> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:270:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping::tuple_mapping() [with ContainerType = scitbx::af::small, 8>; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 270 | from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 271 | ContainerType, | ~~~~~~~~~~~~~~ 272 | ConversionPolicy>(); | ~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:290:7: required from ‘scitbx::boost_python::container_conversions::tuple_mapping_fixed_capacity::tuple_mapping_fixed_capacity() [with ContainerType = scitbx::af::small, 8>]’ 290 | tuple_mapping< | ^~~~~~~~~~~~~~ 291 | ContainerType, | ~~~~~~~~~~~~~~ 292 | fixed_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_ext.cpp:159:59: required from here 159 | tuple_mapping_fixed_capacity, 8> >(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_linear_interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_linear_interpolation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so.0'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' 'lib/mmtbx_geometry_indexing_ext.so'->'lib/mmtbx_geometry_indexing_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:429:8: required from here 429 | def("first_index", f_w::first_index_a_s, (arg("value"))); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:430:8: required from here 430 | def("last_index", f_w::last_index_a_s, (arg("value"))); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = bool]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ g++ -o scitbx/array_family/boost_python/flex_vec3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/iotbx_pdb_hierarchy_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=iotbx_pdb_hierarchy_ext.so.0 iotbx/pdb/hierarchy_ext.o iotbx/pdb/hierarchy_atom_bpl.o iotbx/pdb/hierarchy_atoms_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -liotbx_pdb -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/scope.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/bandpass/ext.cpp:4: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = bool]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = bool]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = bool]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = bool; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_bool.cpp:367:15: required from here 367 | f_w::plain("bool") | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ g++ -o lib/dxtbx_masking_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_masking_ext.so.0 dxtbx/src/dxtbx/masking/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 g++ -o scitbx/array_family/boost_python/flex_vec2_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so.0'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' 'lib/iotbx_pdb_hierarchy_ext.so'->'lib/iotbx_pdb_hierarchy_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/boost_python/flex_vec3_int.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 131 | def( \ | ~~~^~~ 132 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so.0'->'lib/dxtbx_masking_ext.so.0.0.1' 'lib/dxtbx_masking_ext.so'->'lib/dxtbx_masking_ext.so.0.0.1' In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ g++ -o scitbx/array_family/boost_python/flex_sym_mat3_double.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = unsigned int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = float]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/rstbx/simulation/sim_xfel1.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:119:74: required from here 119 | double (*matrix_norm_1)(const_ref const &) = matrix::norm_1; | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:16:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 16 | for (int i=0; i scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h: In instantiation of ‘scitbx::af::shared scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 311 | def( \ | ~~~^~~ 312 | #pyname"_from_byte_str", \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 | shared_from_byte_str, \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | (arg("byte_str"))); \ | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_inf(const scitbx::af::const_ref >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:177:11: required from here 145 | class_f_t | ~~~~~~~~~ 146 | .def("is_square_matrix", is_square_matrix) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | .def("matrix_diagonal", | ~~~~~~~~~~~~~~~~~~~~~~~ 148 | (shared(*)( | ~~~~~~~~~~~~~~~~~~~ 149 | const_ref > const&)) matrix_diagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 | .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 | (void(*)( | ~~~~~~~~~ 154 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | double const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 | arg("value")) | ~~~~~~~~~~~~~ 157 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | (void(*)( | ~~~~~~~~~ 159 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | const_ref const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | arg("diagonal")) | ~~~~~~~~~~~~~~~~ 162 | .def("matrix_diagonal_add_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | (void(*)( | ~~~~~~~~~ 164 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | double const&)) matrix_diagonal_add_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 | arg("value")) | ~~~~~~~~~~~~~ 167 | .def("matrix_diagonal_sum", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 | (double(*)( | ~~~~~~~~~~~ 169 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 | .def("matrix_trace", | ~~~~~~~~~~~~~~~~~~~~ 171 | (double(*)( | ~~~~~~~~~~~ 172 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | .def("matrix_diagonal_product", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | (double(*)( | ~~~~~~~~~~~ 175 | const_ref > const&)) matrix_diagonal_product) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | .def("matrix_norm_1", matrix_norm_1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 | .def("matrix_norm_inf", matrix::norm_inf) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:32:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 32 | for (int i=0; i >&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double_matrix.cpp:178:11: required from here 145 | class_f_t | ~~~~~~~~~ 146 | .def("is_square_matrix", is_square_matrix) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | .def("matrix_diagonal", | ~~~~~~~~~~~~~~~~~~~~~~~ 148 | (shared(*)( | ~~~~~~~~~~~~~~~~~~~ 149 | const_ref > const&)) matrix_diagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .def("matrix_upper_bidiagonal", matrix_upper_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 | .def("matrix_lower_bidiagonal", matrix_lower_bidiagonal) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 | (void(*)( | ~~~~~~~~~ 154 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | double const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 | arg("value")) | ~~~~~~~~~~~~~ 157 | .def("matrix_diagonal_set_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 | (void(*)( | ~~~~~~~~~ 159 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | const_ref const&)) matrix_diagonal_set_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | arg("diagonal")) | ~~~~~~~~~~~~~~~~ 162 | .def("matrix_diagonal_add_in_place", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 | (void(*)( | ~~~~~~~~~ 164 | ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 | double const&)) matrix_diagonal_add_in_place, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 | arg("value")) | ~~~~~~~~~~~~~ 167 | .def("matrix_diagonal_sum", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 | (double(*)( | ~~~~~~~~~~~ 169 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 | .def("matrix_trace", | ~~~~~~~~~~~~~~~~~~~~ 171 | (double(*)( | ~~~~~~~~~~~ 172 | const_ref > const&)) matrix_diagonal_sum) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 | .def("matrix_diagonal_product", | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 | (double(*)( | ~~~~~~~~~~~ 175 | const_ref > const&)) matrix_diagonal_product) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 | .def("matrix_norm_1", matrix_norm_1) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 | .def("matrix_norm_inf", matrix::norm_inf) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 | .def("matrix_norm_frobenius", matrix::norm_frobenius) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:46:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | for (int k=0; k < a_ij.size(); ++k) norm_accu(a_ij[k]); | ~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h: In member function ‘void scitbx::af::shared_plain::resize(const size_type&) [with ElementType = cctbx::crystal_orientation]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const cctbx::crystal_orientation&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = cctbx::crystal_orientation]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = float]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = float]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = float]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = float; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_float.cpp:12:33: required from here 12 | flex_wrapper::numeric("float", boost::python::scope()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = long int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = signed char]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = short int]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ g++ -o lib/mmtbx_bulk_solvent_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_bulk_solvent_ext.so.0 mmtbx/bulk_solvent/bulk_solvent_ext.o mmtbx/bulk_solvent/bulk_solvent.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/rstbx_symmetry_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_symmetry_constraints_ext.so.0 rstbx/symmetry/constraints/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/mmtbx_ramachandran_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_ramachandran_restraints_ext.so.0 mmtbx/geometry_restraints/boost_python/ramachandran_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h: In function ‘scitbx::af::shared > scitbx::misc::split_lines(const char*, std::size_t, bool, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:24:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 24 | while (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | while (i < size && data[i] != '\n' && data[i] != '\r') i++; | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:27:15: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 27 | if (i < size) { | ~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:28:38: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 28 | if (data[i] == '\r' && i+1 < size && data[i+1] == '\n') { | ~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/misc/split_lines.h:46:13: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 46 | if (j < size) { | ~~^~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = long unsigned int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = long unsigned int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = unsigned char]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = unsigned char]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i'lib/rstbx_symmetry_constraints_ext.so.0.0.1' 'lib/rstbx_symmetry_constraints_ext.so'->'lib/rstbx_symmetry_constraints_ext.so.0.0.1' /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = short unsigned int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = short unsigned int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i'lib/mmtbx_bulk_solvent_ext.so.0.0.1' 'lib/mmtbx_bulk_solvent_ext.so'->'lib/mmtbx_bulk_solvent_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_clash_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_clash_ext.so.0 mmtbx/geometry/boost_python/clash_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp: In function ‘scitbx::af::flex::type* scitbx::af::{anonymous}::from_list_or_tuple_of_lists_or_tuples(PyObject*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:138:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:154:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 154 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:190:38: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 190 | if (PyList_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:206:39: warning: comparison of integer expressions of different signedness: ‘Py_ssize_t’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 206 | if (PyTuple_GET_SIZE(row) != n_columns) { | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = unsigned int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = unsigned int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:452:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 452 | for (int i=1; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 454 | if (i != indices.size() - 1) o << ","; | ~~^~~~~~~~~~~~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so.0'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' 'lib/mmtbx_ramachandran_restraints_ext.so'->'lib/mmtbx_ramachandran_restraints_ext.so.0.0.1' g++ -o scitbx/array_family/boost_python/loops.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/loops.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:140:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h: In instantiation of ‘FloatType scitbx::matrix::norm_1(const scitbx::af::const_ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:365:26: required from here 365 | return matrix::norm_1(self); | ~~~~~~~~~~~~~~^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/norms.h:25:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 25 | for (int i=0; i scitbx::af::boost_python::shared_from_byte_str(const boost::python::api::object&) [with ElementType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:536:8: required from here 536 | def( | ~~~^ 537 | "double_from_byte_str", | ~~~~~~~~~~~~~~~~~~~~~~~ 538 | shared_from_byte_str, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 539 | (arg("byte_str"))); | ~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:59: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘boost::python::ssize_t’ {aka ‘long int’} [-Wsign-compare] 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/byte_str.h:81:5: note: in expansion of macro ‘SCITBX_ASSERT’ 81 | SCITBX_ASSERT(shared_array_size * sizeof(ElementType) == len_byte_str); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned char]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:141:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:142:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:885:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 885 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >; e_t = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:886:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 886 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to<__cxx11::basic_string >; _Tp = __cxx11::basic_string]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = unsigned int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_size_t.cpp:143:3: required from here 105 | flex_wrapper::integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::first_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:963:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 963 | def("first_index", first_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:616:41: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 616 | return first_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/bits/stl_function.h:1435, from /usr/include/c++/14/functional:49, from /usr/include/boost/config/no_tr1/functional.hpp:21, from /usr/include/boost/function/detail/prologue.hpp:15, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h: In instantiation of ‘static boost::optional scitbx::af::boost_python::flex_wrapper::last_index_a_s(const f_t&, e_t) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >; e_t = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:964:12: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 964 | def("last_index", last_index_a_s); | ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:621:40: warning: ‘std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = equal_to; _Tp = double]’ is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 621 | return last_index(a, std::bind2nd(std::equal_to(), x)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ Create symlinks for: 'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so.0'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' 'lib/mmtbx_geometry_clash_ext.so'->'lib/mmtbx_geometry_clash_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = std::complex]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = std::complex]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ g++ -o scitbx/array_family/boost_python/show_sizes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/show_sizes.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::complex]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = std::complex; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_complex_double.cpp:117:24: required from here 117 | f_w::numeric_common("complex_double", local_scope) | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = std::__cxx11::basic_string]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = std::__cxx11::basic_string]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = std::__cxx11::basic_string]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:888:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::ordered(const std::string&, const boost::python::api::object&) [with ElementType = std::__cxx11::basic_string; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 888 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_std_string.cpp:132:16: required from here 132 | fw::ordered("std_string", scope()) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so.0'->'lib/rstbx_simulation_ext.so.0.0.1' 'lib/rstbx_simulation_ext.so'->'lib/rstbx_simulation_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/basic_statistics.h: In instantiation of ‘scitbx::math::median_statistics scitbx::math::median_functor::dispersion(const scitbx::af::ref&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:31:26: required from ‘static scitbx::math::median_statistics scitbx::af::boost_python::median_functor_wrapper::dispersion(wt&, const scitbx::af::const_ref&) [with FloatType = double; wt = scitbx::math::median_functor]’ 31 | return O.dispersion(af::make_ref(buffer)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:40:13: required from ‘static void scitbx::af::boost_python::median_functor_wrapper::wrap(const char*) [with FloatType = double]’ 36 | class_(name, no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | .def(init<>()) | ~~~~~~~~~~~~~~ 38 | .def(init(arg("seed"))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 | .def("__call__", call, arg("data")) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 | .def("dispersion", dispersion, arg("data")) | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_median.cpp:63:41: required from here 63 | median_functor_wrapper::wrap("median_functor"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/basic_statistics.h:210:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 210 | for (int i=0; i < data.size(); ++i) { | ~~^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = double]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = double]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = long int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = long int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ g++ -o scitbx/array_family/boost_python/numpy_bridge.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -DSCITBX_HAVE_NUMPY_INCLUDE -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/usr/lib/python3/dist-packages/numpy/core/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = signed char]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = signed char]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = double]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1020:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric(const std::string&, const boost::python::api::object&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1020 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_double.cpp:477:42: required from here 477 | f_w::class_f_t class_f_t(f_w::numeric("double", scope())); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = short int]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = short int]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract >&>(obj).boost::python::extract >&>::boost::python::converter::extract_reference >&>.boost::python::converter::extract_reference >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:319:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = long int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = long int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:320:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ ar rc reduce/lib/libreduce2lib.a mmtbx/reduce/PositionReturn.o mmtbx/reduce/InteractionGraph.o mmtbx/reduce/Optimizers.o /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = signed char]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = signed char; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:321:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; ranlib reduce/lib/libreduce2lib.a g++ -o scitbx/cubicle_neighbors_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = short int]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:910:19: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_common(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 910 | return plain(python_name) | ~~~~~^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:966:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::numeric_no_pow(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 966 | return numeric_common(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1031:28: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1031 | return numeric_no_pow(python_name, flex_root_scope) | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:1048:21: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::signed_integer(const std::string&, const boost::python::api::object&) [with ElementType = short int; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_ >, scitbx::af::boost_python::flex_wrapper, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 1048 | return integer(python_name, flex_root_scope); | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_int.cpp:322:3: required from here 242 | flex_wrapper::signed_integer(#pyname, scope()) \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o lib/rstbx_simage_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_simage_ext.so.0 rstbx/simage/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/fftpack/boost_python/fftpack_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec3]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec3]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i'lib/rstbx_simage_ext.so.0.0.1' 'lib/rstbx_simage_ext.so'->'lib/rstbx_simage_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ g++ -o lib/mmtbx_probe_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_probe_ext.so.0 mmtbx/probe/boost_python/probe_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/probe/lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_int.cpp:117:15: required from here 117 | f_w::plain("vec3_int") | ~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/glmtbx/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/glmtbx/boost_python/ext.cc cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/graphics_utils/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/graphics_utils/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so.0'->'lib/mmtbx_probe_ext.so.0.0.1' 'lib/mmtbx_probe_ext.so'->'lib/mmtbx_probe_ext.so.0.0.1' g++ -o scitbx/iso_surface/iso_surface_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/iso_surface/iso_surface_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec3]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec3]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >::type* scitbx::af::{anonymous}::array_indices_as_double_from_array_focus_dimensions(const scitbx::vec2&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:128:26: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 128 | for(std::size_t i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec3_double.cpp:567:15: required from here 567 | f_w::plain("vec3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ g++ -o scitbx/lbfgs/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -DSCITBX_LBFGS_HAVE_LBFGS_FEM -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgs/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_indexing_api_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_indexing_api_ext.so.0 rstbx/indexing_api/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/rstbx_bandpass_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_bandpass_ext.so.0 rstbx/bandpass/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lann-cctbx -lann_adaptor -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so.0'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' 'lib/rstbx_diffraction_fastbragg_ext.so'->'lib/rstbx_diffraction_fastbragg_ext.so.0.0.1' g++ -o scitbx/lbfgs/lbfgs_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable scitbx/lbfgs/lbfgs_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::sym_mat3]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::sym_mat3]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ Create symlinks for: 'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so.0'->'lib/rstbx_indexing_api_ext.so.0.0.1' 'lib/rstbx_indexing_api_ext.so'->'lib/rstbx_indexing_api_ext.so.0.0.1' In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec2]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::vec2]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i'lib/rstbx_bandpass_ext.so.0.0.1' 'lib/rstbx_bandpass_ext.so'->'lib/rstbx_bandpass_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/linalg_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/linalg_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::sym_mat3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::sym_mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_sym_mat3_double.cpp:124:15: required from here 124 | f_w::plain("sym_mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::vec2]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::vec2]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::vec2; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_vec2_double.cpp:440:15: required from here 440 | f_w::plain("vec2_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/linalg/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h: In member function ‘void scitbx::af::boost_python::detail::getstate_manager::advance(char*)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:43: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_pickle_single_buffered.h:43:9: note: in expansion of macro ‘SCITBX_ASSERT’ 43 | SCITBX_ASSERT(str_end - str_begin <= str_capacity); | ^~~~~~~~~~~~~ g++ -o scitbx/linalg/boost_python/cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/cholesky.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/lbfgs_fem.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::mat3]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::mat3]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = scitbx::mat3]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_mat3_double.cpp:180:15: required from here 180 | f_w::plain("mat3_double") | ~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared_plain >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:769:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 769 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 770 | shared_plain, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 772 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:773:52: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 773 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 774 | shared, | ~~~~~~~~~~~~~~~~~~~~ 775 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/linalg/boost_python/svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/svd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:22: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared_plain >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared_plain >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:95:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::af::tiny]’ 95 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h: In instantiation of ‘static void scitbx::af::boost_python::shared_from_flex::construct(PyObject*, boost::python::converter::rvalue_from_python_stage1_data*) [with SharedType = scitbx::af::shared >; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:41:9: required from ‘scitbx::af::boost_python::shared_from_flex::shared_from_flex() [with SharedType = scitbx::af::shared >]’ 41 | &construct, | ^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:96:7: required from ‘scitbx::af::boost_python::shared_flex_conversions::shared_flex_conversions() [with ElementType = scitbx::af::tiny]’ 96 | shared_from_flex >(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:777:7: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 777 | shared_flex_conversions(); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:24: warning: possibly dangling reference to a temporary [-Wdangling-reference] 65 | flex_type const& a = boost::python::extract(obj)(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_flex_conversions.h:65:73: note: the temporary was destroyed at the end of the full expression ‘boost::python::extract, scitbx::af::flex_grid<> >&>(obj).boost::python::extract, scitbx::af::flex_grid<> >&>::boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>.boost::python::converter::extract_reference, scitbx::af::flex_grid<> >&>::operator()()’ 65 | flex_type const& a = boost::python::extract(obj)(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:18: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘scitbx::af::versa > scitbx::af::copy_slice(const const_ref >&, small) [with T = tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:202:29: required from ‘static scitbx::af::versa > scitbx::af::boost_python::flex_wrapper::getitem_nd_slice(const scitbx::af::const_ref >&, const scitbx::af::small&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 202 | return copy_slice(self, slices_simple); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:228:54: required from ‘static boost::python::api::object scitbx::af::boost_python::flex_wrapper::getitem_tuple(boost::python::api::object&, boost::python::api::object) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 228 | return boost::python::object(getitem_nd_slice(a.const_ref(), slices)); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:806:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:89:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 89 | for (int i=0;i >&, small, const const_ref >&) [with T = tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:114:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 114 | for (int i=0;i'lib/rstbx_integration_ext.so.0.0.1' 'lib/rstbx_integration_ext.so'->'lib/rstbx_integration_ext.so.0.0.1' g++ -o scitbx/linalg/boost_python/eigensystem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/eigensystem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h: In instantiation of ‘void scitbx::af::detail::copy_to_slice_detail(scitbx::af::versa >&, scitbx::af::small, const scitbx::af::const_ref >&) [with T = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:119:35: required from ‘void scitbx::af::copy_to_slice(versa >&, small, const const_ref >&) [with T = tiny]’ 119 | detail::copy_to_slice_detail(self, slices, other); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:269:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_nd_slice(f_t&, const scitbx::af::small&, const f_t&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; f_t = scitbx::af::versa, scitbx::af::flex_grid<> >]’ 269 | copy_to_slice(self, slices_simple, other.const_ref()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:289:25: required from ‘static void scitbx::af::boost_python::flex_wrapper::setitem_tuple(boost::python::api::object&, boost::python::api::object, boost::python::api::object&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy]’ 289 | setitem_nd_slice(a, slices, b); | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:810:13: required from ‘static scitbx::af::boost_python::flex_wrapper::class_f_t scitbx::af::boost_python::flex_wrapper::plain(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; class_f_t = boost::python::class_, scitbx::af::flex_grid<> >, scitbx::af::boost_python::flex_wrapper >, boost::python::detail::not_specified, boost::python::detail::not_specified>; std::string = std::__cxx11::basic_string]’ 782 | result | ~~~~~~ 783 | .def(init const&, optional >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 | .def(init >()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 | .def(init const&>()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 | .def("element_size", element_size) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 | .staticmethod("element_size") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 | .def("accessor", accessor) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 789 | .def("nd", nd) | ~~~~~~~~~~~~~~ 790 | .def("is_0_based", is_0_based) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 791 | .def("origin", origin) | ~~~~~~~~~~~~~~~~~~~~~~ 792 | .def("all", all) | ~~~~~~~~~~~~~~~~ 793 | .def("last", last_0) | ~~~~~~~~~~~~~~~~~~~~ 794 | .def("last", last_1) | ~~~~~~~~~~~~~~~~~~~~ 795 | .def("is_padded", is_padded) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 | .def("focus", focus_0) | ~~~~~~~~~~~~~~~~~~~~~~ 797 | .def("focus", focus_1) | ~~~~~~~~~~~~~~~~~~~~~~ 798 | .def("focus_size_1d", focus_size_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 | .def("is_trivial_1d", is_trivial_1d) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 | .def("shift_origin", shift_origin) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 | .def("id", id) | ~~~~~~~~~~~~~~ 802 | .def("size", size) | ~~~~~~~~~~~~~~~~~~ 803 | .def("__len__", size) | ~~~~~~~~~~~~~~~~~~~~~ 804 | .def("__sizeof__", memory_footprint) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 805 | .def("capacity", capacity) | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 806 | .def("__getitem__", getitem_tuple) // must be before other __getitem__ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 807 | .def("__getitem__", getitem_1d_slice) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 | .def("__getitem__", getitem_1d, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 | .def("__getitem_fgdit__", getitem_fgdit, GetitemReturnValuePolicy()) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 | .def("__setitem__", setitem_tuple) // must be before other __setitem__ | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_tiny_size_t_2.cpp:32:47: required from here 32 | flex_wrapper >::plain("tiny_size_t_2") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/slice.h:70:24: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | if (idx_a[j] < slices[j].stop) break; g++ -o scitbx/linalg/boost_python/lapack_fem_bpl.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lstbx/boost_python/lstbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lstbx/boost_python/lstbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lstbx/boost_python/normal_equations.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lstbx/boost_python/normal_equations.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/gridding.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/boost_python/fftpack_ext.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o lib/mmtbx_scaling_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_scaling_ext.so.0 mmtbx/scaling/scaling_ext.o mmtbx/scaling/twinning_bpl.o mmtbx/scaling/relative_scaling_bpl.o mmtbx/scaling/outlier_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /usr/include/c++/14/cassert:44, from /usr/include/boost/move/detail/type_traits.hpp:33, from /usr/include/boost/move/traits.hpp:31, from /usr/include/boost/move/utility.hpp:30, from /usr/include/boost/optional/optional.hpp:59, from /usr/include/boost/optional.hpp:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref_reductions.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:12, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:40:53: required from here 40 | shared_wrapper, rir>::wrap("stl_vector_unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/math/boost_python/math_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/math_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::vector; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:41:51: required from here 41 | shared_wrapper, rir>::wrap("stl_vector_double"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:42:50: required from here 42 | shared_wrapper, rir>::wrap("stl_set_unsigned") | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::mat3; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:48:37: required from here 48 | shared_wrapper >::wrap("mat3_int"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:49:40: required from here 49 | shared_wrapper >::wrap("tiny_int_3"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:50:40: required from here 50 | shared_wrapper >::wrap("tiny_int_4"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::shared >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_wrapper.h:130:52: required from ‘static boost::python::class_ > scitbx::af::boost_python::shared_wrapper::wrap(const std::string&) [with ElementType = scitbx::af::tiny; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 130 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 131 | w_t, | ~~~~ 132 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/shared_ext.cpp:51:40: required from here 51 | shared_wrapper >::wrap("tiny_int_2"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so.0'->'lib/mmtbx_scaling_ext.so.0.0.1' 'lib/mmtbx_scaling_ext.so'->'lib/mmtbx_scaling_ext.so.0.0.1' g++ -o scitbx/math/boost_python/basic_statistics.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/basic_statistics.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors_ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp: In instantiation of ‘std::map > scitbx::cubicle_neighbors::neighbors_of(const scitbx::af::const_ref >&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors_ext.cpp:23:36: required from here 23 | .def("neighbors_of", &w_t::neighbors_of, ( | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:61:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 61 | if (i_cub[0] < 0 || i_cub[0] >= n_cubicles[0]) continue; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:63:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 63 | if (i_cub[1] < 0 || i_cub[1] >= n_cubicles[1]) continue; /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:65:40: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 65 | if (i_cub[2] < 0 || i_cub[2] >= n_cubicles[2]) continue; g++ -o scitbx/math/boost_python/gaussian.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/gaussian.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicles.h: In instantiation of ‘scitbx::vec3 scitbx::cubicles::i_cubicle(const SiteType&) const [with SiteType = scitbx::vec3; CubicleContentType = std::vector::cubicle_site, std::allocator::cubicle_site> >; FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors.hpp:43:30: required from ‘scitbx::cubicle_neighbors::cubicle_neighbors(const scitbx::af::const_ref >&, const FloatType&, const FloatType&) [with FloatType = double]’ 43 | cubicles_.i_cubicle(main_sites_cart[i_seq])); | ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2) [with A0 = boost::python::objects::reference_to_value >&>; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value; Value = scitbx::cubicle_neighbors<>; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<3>::apply::execute(PyObject*, t0, t1, t2) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector3 >&, const double&, const double&>; PyObject = _object; t0 = const scitbx::af::const_ref >&; t1 = const double&; t2 = const double&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector3 >&, const double&, const double&>; Arity = boost::mpl::size >&, const double&, const double&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_ >; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector3 >&, const double&, const double&>; NArgs = boost::mpl::size >&, const double&, const double&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_ >; DerivedT = boost::python::init >&, const double&, const double&>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const double&, const double&> >; classT = boost::python::class_ >]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_ >; DerivedVisitor = boost::python::init >&, const double&, const double&>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const double&, const double&>; W = scitbx::cubicle_neighbors<>; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_ >]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicle_neighbors_ext.cpp:16:13: required from here 15 | class_("cubicle_neighbors", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 16 | .def(init< | ~~~~^~~~~~ 17 | af::const_ref > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 18 | double const&, | ~~~~~~~~~~~~~~ 19 | double const&>(( | ~~~~~~~~~~~~~~~~ 20 | arg("main_sites_cart"), | ~~~~~~~~~~~~~~~~~~~~~~~ 21 | arg("cubicle_edge"), | ~~~~~~~~~~~~~~~~~~~~ 22 | arg("epsilon")=1.e-6))) | ~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/cubicles.h:176:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 176 | else if (j >= ref.accessor()[i]) j = ref.accessor()[i]-1; | ~~^~~~~~~~~~~~~~~~~~ g++ -o scitbx/math/boost_python/golay.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/golay.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = bool]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:202:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:203:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:204:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = float]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:205:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:206:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = std::complex]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:207:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = signed char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:208:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:209:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned char]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:214:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = short unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:215:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:216:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp: In instantiation of ‘boost::python::api::object scitbx::af::boost_python::ref_flex_as_numpy_array(const scitbx::af::ref >&, bool, int) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here 191 | return ref_flex_as_numpy_array(O, optional, type_num); \ | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:86:23: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 86 | for(unsigned i=0;i > scitbx::af::boost_python::versa_flex_from_numpy_array(const boost::python::numpy::ndarray&) [with ElementType = long unsigned int]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:224:3: required from here 199 | versa_flex_from_numpy_array(arr_obj)); \ | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:24: warning: comparison of integer expressions of different signedness: ‘npy_intp’ {aka ‘long int’} and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 132 | SCITBX_ASSERT(ndim <= all.capacity()); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:132:5: note: in expansion of macro ‘SCITBX_ASSERT’ 132 | SCITBX_ASSERT(ndim <= all.capacity()); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:34: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘npy_intp’ {aka ‘long int’} [-Wsign-compare] 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/numpy_bridge.cpp:138:5: note: in expansion of macro ‘SCITBX_ASSERT’ 138 | SCITBX_ASSERT(grid.size_1d() == PyArray_Size(obj_ptr)); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/serialization/base_256.h:2, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/floating_point_epsilon.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ 142 | raw::setulb( | ~~~~~~~~~~~^ 143 | n_, | ~~~ 144 | m_, | ~~~ 145 | raw::ref1(x), | ~~~~~~~~~~~~~~~~~~~~~~~~ 146 | raw::ref1(l_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | raw::ref1(u_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | raw::ref1(nbd_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | f_, | ~~~ 150 | raw::ref1(g), | ~~~~~~~~~~~~~~~~~~~~~~~~ 151 | factr_, | ~~~~~~~ 152 | pgtol_, | ~~~~~~~ 153 | raw::ref1(wa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | raw::ref1(iwa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | task_, | ~~~~~~ 156 | iprint_, | ~~~~~~~~ 157 | csave_, | ~~~~~~~ 158 | raw::ref1(lsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 | raw::ref1(isave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | raw::ref1(dsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | enable_stp_init_); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 29 | .def("process", &w_t::process, ( | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 974 | write_ref1(" X =", x); | ~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 3786 | prn3lb(n,x,f,task,iprint,info,itfile, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3787 | iter,nfgv,nintol,nskip,nact,sbgnrm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3788 | zero,nint,word,iback,stp,xstep,k, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3789 | cachyt,sbtime,lnscht); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:142:22: required from ‘bool scitbx::lbfgsb::minimizer::process(const scitbx::af::ref&, const FloatType&, const scitbx::af::ref&, bool) [with FloatType = double]’ 142 | raw::setulb( | ~~~~~~~~~~~^ 143 | n_, | ~~~ 144 | m_, | ~~~ 145 | raw::ref1(x), | ~~~~~~~~~~~~~~~~~~~~~~~~ 146 | raw::ref1(l_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 | raw::ref1(u_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | raw::ref1(nbd_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 | f_, | ~~~ 150 | raw::ref1(g), | ~~~~~~~~~~~~~~~~~~~~~~~~ 151 | factr_, | ~~~~~~~ 152 | pgtol_, | ~~~~~~~ 153 | raw::ref1(wa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | raw::ref1(iwa_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 | task_, | ~~~~~~ 156 | iprint_, | ~~~~~~~~ 157 | csave_, | ~~~~~~~ 158 | raw::ref1(lsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 | raw::ref1(isave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 | raw::ref1(dsave_.ref()), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 | enable_stp_init_); | ~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:29:25: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 29 | .def("process", &w_t::process, ( | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j::minimizer(const int&, const int&, scitbx::af::shared, scitbx::af::shared, scitbx::af::shared, bool, const FloatType&, const FloatType&, const int&) [with FloatType = double]’: /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5, A6, A7, A8) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value; A2 = boost::python::objects::reference_to_value >; A3 = boost::python::objects::reference_to_value >; A4 = boost::python::objects::reference_to_value >; A5 = bool; A6 = boost::python::objects::reference_to_value; A7 = boost::python::objects::reference_to_value; A8 = boost::python::objects::reference_to_value; Value = scitbx::lbfgsb::minimizer; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<9>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5, t6, t7, t8) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; PyObject = _object; t0 = const int&; t1 = const int&; t2 = scitbx::af::shared; t3 = scitbx::af::shared; t4 = scitbx::af::shared; t5 = bool; t6 = const double&; t7 = const double&; t8 = const int&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; Arity = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, not_specified, not_specified, not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:377:31: required from ‘static void boost::python::detail::define_class_init_helper<0>::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, const boost::python::detail::keyword_range&) [with ClassT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::vector9, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&>; NArgs = boost::mpl::size, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&> >; boost::python::detail::keyword_range = std::pair]’ 377 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedT = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >; classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>; DerivedVisitor = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init, scitbx::af::shared, scitbx::af::shared, bool, const double&, const double&, const int&, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_>; W = scitbx::lbfgsb::minimizer; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::detail::not_specified, boost::python::detail::not_specified, boost::python::detail::not_specified>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:20:13: required from ‘static void scitbx::lbfgsb::{anonymous}::minimizer_wrappers::wrap() [with FloatType = double]’ 19 | class_("minimizer", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 20 | .def(init, | ~~~~~~~~~~~~~~~~~~~~~~ 23 | af::shared, | ~~~~~~~~~~~~~~~~~~~~~~ 24 | af::shared, | ~~~~~~~~~~~~~~~~ 25 | bool, | ~~~~~ 26 | FloatType const&, | ~~~~~~~~~~~~~~~~~ 27 | FloatType const&, | ~~~~~~~~~~~~~~~~~ 28 | int const&>()) | ~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/boost_python/lbfgsb_ext.cpp:112:37: required from here 112 | minimizer_wrappers::wrap(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:118:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 118 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:118:9: note: in expansion of macro ‘SCITBX_ASSERT’ 118 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:119:32: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 119 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:119:9: note: in expansion of macro ‘SCITBX_ASSERT’ 119 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:120:34: warning: comparison of integer expressions of different signedness: ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 120 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb.h:120:9: note: in expansion of macro ‘SCITBX_ASSERT’ 120 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so.0'->'lib/mmtbx_tls_ext.so.0.0.1' 'lib/mmtbx_tls_ext.so'->'lib/mmtbx_tls_ext.so.0.0.1' g++ -o scitbx/math/boost_python/minimum_covering_sphere.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/minimum_covering_sphere.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/math/boost_python/principal_axes_of_inertia.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/principal_axes_of_inertia.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::sym_mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::sym_mat3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::sym_mat3*; _Size = long unsigned int; _Tp = scitbx::sym_mat3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny*; _Size = long unsigned int; _Tp = scitbx::af::tiny]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/math/boost_python/row_echelon.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/row_echelon.cpp In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::mat3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::mat3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::mat3*; _Size = long unsigned int; _Tp = scitbx::mat3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::af::tiny; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_iso_surface_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_iso_surface_ext.so.0 scitbx/iso_surface/iso_surface_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_cubicle_neighbors_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_cubicle_neighbors_ext.so.0 scitbx/cubicle_neighbors_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::sym_mat3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::sym_mat3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::sym_mat3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so.0'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' 'lib/scitbx_cubicle_neighbors_ext.so'->'lib/scitbx_cubicle_neighbors_ext.so.0.0.1' g++ -o scitbx/math/boost_python/tensor_rank_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/tensor_rank_2.cpp Create symlinks for: 'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so.0'->'lib/scitbx_iso_surface_ext.so.0.0.1' 'lib/scitbx_iso_surface_ext.so'->'lib/scitbx_iso_surface_ext.so.0.0.1' cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/chebyshev.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/chebyshev.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp: In function ‘int scitbx::lapack::boost_python::dsyev_wrapper(const std::string&, const std::string&, const scitbx::af::ref >&, const scitbx::af::ref&, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 246 | SCITBX_ASSERT(w.size() == n); | ~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/linalg/boost_python/lapack_fem_bpl.cpp:246:5: note: in expansion of macro ‘SCITBX_ASSERT’ 246 | SCITBX_ASSERT(w.size() == n); | ^~~~~~~~~~~~~ g++ -o lib/rstbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_ext.so.0 rstbx/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/math/boost_python/icosahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/icosahedron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::mat3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::mat3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::mat3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so.0'->'lib/rstbx_ext.so.0.0.1' 'lib/rstbx_ext.so'->'lib/rstbx_ext.so.0.0.1' g++ -o scitbx/math/boost_python/slatec.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/slatec.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/line_search.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/line_search.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec2]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec2&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec2*; _Size = long unsigned int; _Tp = scitbx::vec2]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/function/function_base.hpp:33, from /usr/include/boost/function/detail/prologue.hpp:18, from /usr/include/boost/function/function_template.hpp:13, from /usr/include/boost/function/detail/maybe_include.hpp:15, from /usr/include/boost/function/function0.hpp:11, from /usr/include/boost/python/errors.hpp:13, from /usr/include/boost/python/handle.hpp:11, from /usr/include/boost/python/to_python_value.hpp:14, from /usr/include/boost/python/default_call_policies.hpp:10, from /usr/include/boost/python/make_function.hpp:10, from /usr/include/boost/python/def.hpp:11, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/flex_wrapper.h:6: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/math/boost_python/r3_rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/r3_rotation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/resample.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/resample.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_geometry_asa_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_geometry_asa_ext.so.0 mmtbx/geometry/boost_python/asa_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/math/boost_python/quadrature.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/quadrature.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so.0'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' 'lib/mmtbx_geometry_asa_ext.so'->'lib/mmtbx_geometry_asa_ext.so.0.0.1' g++ -o lib/mmtbx_tls_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_tls_utils_ext.so.0 mmtbx/tls/utils.o mmtbx/tls/utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_tls -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/math/boost_python/unimodular_generator.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/unimodular_generator.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so.0'->'lib/mmtbx_tls_utils_ext.so.0.0.1' 'lib/mmtbx_tls_utils_ext.so'->'lib/mmtbx_tls_utils_ext.so.0.0.1' g++ -o scitbx/math/boost_python/halton.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/halton.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_graphics_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_graphics_utils_ext.so.0 scitbx/graphics_utils/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec2; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec2&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec2]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ Create symlinks for: 'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so.0'->'lib/scitbx_graphics_utils_ext.so.0.0.1' 'lib/scitbx_graphics_utils_ext.so'->'lib/scitbx_graphics_utils_ext.so.0.0.1' g++ -o scitbx/math/boost_python/least_squares_plane.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/least_squares_plane.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/continued_fraction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/continued_fraction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/numeric_limits.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/numeric_limits.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘void scitbx::af::versa_plain::resize(const AccessorType&) [with ElementType = scitbx::vec3; AccessorType = scitbx::af::flex_grid<>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:27: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:307: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::vec3]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:168:50: note: ‘’ declared here 168 | base_class::resize(m_accessor.size_1d(), ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_lbfgsb_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgsb_ext.so.0 scitbx/lbfgsb/boost_python/lbfgsb_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer Create symlinks for: 'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so.0'->'lib/scitbx_lbfgsb_ext.so.0.0.1' 'lib/scitbx_lbfgsb_ext.so'->'lib/scitbx_lbfgsb_ext.so.0.0.1' g++ -o scitbx/math/boost_python/distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/distributions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/exp_functions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/exp_functions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/zernike.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/zernike.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/zernike_moments.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/mmtbx_reduce_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=mmtbx_reduce_ext.so.0 mmtbx/reduce/boost_python/reduce_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Lreduce/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/reduce/lib -Lprobe/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/probe/lib -lreduce2lib -lprobelib -liotbx_pdb -lcctbx -lscitbx_boost_python -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/math/boost_python/2d_zernike_moments.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/2d_zernike_moments.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/weighted_covariance.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/weighted_covariance.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/rotation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/rotation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/interpolation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/interpolation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/math/boost_python/tetrahedron.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/tetrahedron.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_glmtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_glmtbx_ext.so.0 scitbx/glmtbx/boost_python/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so.0'->'lib/scitbx_glmtbx_ext.so.0.0.1' 'lib/scitbx_glmtbx_ext.so'->'lib/scitbx_glmtbx_ext.so.0.0.1' g++ -o scitbx/math/boost_python/angle_derivative.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/boost_python/angle_derivative.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/rstbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=rstbx_array_family_flex_ext.so.0 rstbx/array_family/ext.o rstbx/array_family/flex_rstbx_arrays.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lrstbx -lann-cctbx -lcctbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so.0'->'lib/mmtbx_reduce_ext.so.0.0.1' 'lib/mmtbx_reduce_ext.so'->'lib/mmtbx_reduce_ext.so.0.0.1' g++ -o scitbx/minpack/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/r3_utils_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/r3_utils_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so.0'->'lib/rstbx_array_family_flex_ext.so.0.0.1' 'lib/rstbx_array_family_flex_ext.so'->'lib/rstbx_array_family_flex_ext.so.0.0.1' g++ -o scitbx/random/boost_python/random_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/random/boost_python/random_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_linalg_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_linalg_ext.so.0 scitbx/linalg/boost_python/linalg_ext.o scitbx/linalg/boost_python/matrix.o scitbx/linalg/boost_python/cholesky.o scitbx/linalg/boost_python/householder.o scitbx/linalg/boost_python/svd.o scitbx/linalg/boost_python/eigensystem.o scitbx/linalg/boost_python/lapack_fem_bpl.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/random/boost_python/basic_distributions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/random/boost_python/basic_distributions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so.0'->'lib/scitbx_linalg_ext.so.0.0.1' 'lib/scitbx_linalg_ext.so'->'lib/scitbx_linalg_ext.so.0.0.1' g++ -o scitbx/rigid_body/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/vector.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/vector.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/matrix.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/matrix.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/approx_equal.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/approx_equal.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/random.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/random.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/lu_factorization.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/lu_factorization.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/sparse/boost_python/sparse_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/boost_python/sparse_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_fftpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_fftpack_ext.so.0 scitbx/fftpack/boost_python/fftpack_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/stl/set_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/stl/vector_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so.0'->'lib/scitbx_fftpack_ext.so.0.0.1' 'lib/scitbx_fftpack_ext.so'->'lib/scitbx_fftpack_ext.so.0.0.1' g++ -o scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/suffixtree/boost_python/suffixtree_shared_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/suffixtree/boost_python/suffixtree_single_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/suffixtree/boost_python/suffixtree_single_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/suffixtree/boost_python/object_extensions.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/suffixtree/boost_python/object_extensions.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/wigner/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/wigner/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/raw.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/levenberg_marquardt.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/ext.cpp:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/levenberg_marquardt.h: In member function ‘void scitbx::minpack::levenberg_marquardt::process_fvec(const scitbx::af::const_ref&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/levenberg_marquardt.h:80:35: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 80 | SCITBX_ASSERT(fvec.size() == m); | ~~~~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/minpack/levenberg_marquardt.h:80:9: note: in expansion of macro ‘SCITBX_ASSERT’ 80 | SCITBX_ASSERT(fvec.size() == m); | ^~~~~~~~~~~~~ g++ -o smtbx/ab_initio/ab_initio_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/ab_initio/ab_initio_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/array_family/af_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/array_family/af_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lbfgs_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lbfgs_ext.so.0 scitbx/lbfgs/ext.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o smtbx/refinement/constraints/boost_python/affine.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/affine.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so.0'->'lib/scitbx_lbfgs_ext.so.0.0.1' 'lib/scitbx_lbfgs_ext.so'->'lib/scitbx_lbfgs_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/constraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/constraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/direction.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/direction.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/independent_scalar_parameters.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/occupancy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/occupancy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_lstbx_normal_equations_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_lstbx_normal_equations_ext.so.0 scitbx/lstbx/boost_python/lstbx_ext.o scitbx/lstbx/boost_python/normal_equations.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rotr3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/spatial_lib.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/featherstone.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:14: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 4]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:361:21: required from ‘scitbx::rotr3 scitbx::rigid_body::joint_lib::six_dof_aja_simplified(const scitbx::vec3&, const scitbx::af::const_ref&) [with FloatType = double]’ 361 | af::tiny qe(&q[0], &q[4]); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:24:49: required from here 24 | result = joint_lib::six_dof_aja_simplified(center_of_mass, q); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o smtbx/refinement/constraints/boost_python/reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_matrix.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/spatial_lib.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 6]’ 44 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/featherstone.h:683:31: required from ‘scitbx::af::shared > scitbx::rigid_body::featherstone::system_model::inverse_dynamics(const scitbx::af::const_ref >&, const scitbx::af::const_ref >&, const scitbx::af::const_ref&) [with FloatType = double]’ 683 | tau_array[ib] = af::small(f[ib].begin(), f[ib].end()); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/featherstone.h:705:21: required from ‘scitbx::af::shared scitbx::rigid_body::featherstone::system_model::inverse_dynamics_packed(const scitbx::af::const_ref&, const scitbx::af::const_ref&, const scitbx::af::const_ref&) [with FloatType = double]’ 705 | tau_array = inverse_dynamics( | ^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:120:46: required from here 120 | .def("inverse_dynamics_packed", &wt::inverse_dynamics_packed, ( | ^~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ Create symlinks for: 'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so.0'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' 'lib/scitbx_lstbx_normal_equations_ext.so'->'lib/scitbx_lstbx_normal_equations_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/rigid.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/rigid.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/same_group.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/same_group.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/scaled_adp.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/scaled_adp.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/scatterer_parameters.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/scatterer_parameters.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/shared.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/shared.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h: In instantiation of ‘scitbx::af::shared > > scitbx::rigid_body::tardy::construct_bodies(const scitbx::af::const_ref >&, const scitbx::af::const_ref&, const boost::python::api::object&, const FloatType&) [with FloatType = double]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h:203:54: required from ‘scitbx::rigid_body::tardy::model::model(const boost::python::api::object&, const scitbx::af::shared >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, const ft&) [with FloatType = double; ft = double]’ 203 | featherstone::system_model(construct_bodies( | ~~~~~~~~~~~~~~~~^ 204 | sites_.const_ref(), | ~~~~~~~~~~~~~~~~~~~ 205 | masses_.const_ref(), | ~~~~~~~~~~~~~~~~~~~~ 206 | tardy_tree_.attr("cluster_manager"), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 | near_singular_hinges_angular_tolerance_deg_)), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/object/value_holder.hpp:131:11: required from ‘boost::python::objects::value_holder::value_holder(PyObject*, A0, A1, A2, A3, A4, A5) [with A0 = boost::python::objects::reference_to_value; A1 = boost::python::objects::reference_to_value >&>; A2 = boost::python::objects::reference_to_value&>; A3 = boost::python::objects::reference_to_value; A4 = boost::python::objects::reference_to_value; A5 = boost::python::objects::reference_to_value; Value = scitbx::rigid_body::tardy::model<>; PyObject = _object]’ 131 | PyObject* self BOOST_PP_COMMA_IF(N) BOOST_PP_ENUM_BINARY_PARAMS_Z(1, N, A, a)) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 | : m_held( | ~~~~~~~~~ 133 | BOOST_PP_REPEAT_1ST(N, BOOST_PYTHON_UNFORWARD_LOCAL, nil) | ~ /usr/include/boost/python/object/make_holder.hpp:95:18: required from ‘static void boost::python::objects::make_holder<6>::apply::execute(PyObject*, t0, t1, t2, t3, t4, t5) [with Holder = boost::python::objects::value_holder >; ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; PyObject = _object; t0 = const boost::python::api::object&; t1 = const scitbx::af::shared >&; t2 = const scitbx::af::shared&; t3 = const boost::python::api::object&; t4 = const boost::python::api::object&; t5 = const double&]’ 95 | try { | ~^ 96 | (new (memory) Holder( | ~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/detail/make_keyword_range_fn.hpp:63:47: required from ‘boost::python::api::object boost::python::detail::make_keyword_range_constructor(const CallPolicies&, const keyword_range&, Holder*, ArgList*, Arity*) [with ArgList = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; Arity = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; Holder = boost::python::objects::value_holder >; CallPolicies = boost::python::default_call_policies; keyword_range = std::pair]’ 63 | return detail::make_keyword_range_function( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 64 | objects::make_holder | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 | ::template apply::execute | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 | , policies | ~~~~~~~~~~ 67 | , kw); | ~~~~~ /usr/include/boost/python/init.hpp:310:66: required from ‘void boost::python::detail::def_init_aux(ClassT&, const Signature&, NArgs, const CallPoliciesT&, const char*, const keyword_range&) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; keyword_range = std::pair]’ 310 | , detail::make_keyword_range_constructor( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 311 | policies | ~~~~~~~~ 312 | , keywords_ | ~~~~~~~~~~~ 313 | , (typename ClassT::metadata::holder*)0 | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 | ) | ~ /usr/include/boost/python/init.hpp:344:31: required from ‘static void boost::python::detail::define_class_init_helper::apply(ClassT&, const CallPoliciesT&, const Signature&, NArgs, const char*, boost::python::detail::keyword_range) [with ClassT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; CallPoliciesT = boost::python::default_call_policies; Signature = boost::mpl::joint_view >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional >; NArgs = boost::mpl::size >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_, mpl_::void_> >, boost::python::optional > >; int NDefaults = 1; boost::python::detail::keyword_range = std::pair]’ 344 | detail::def_init_aux(cl, args, NArgs(), policies, doc, keywords); | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/init.hpp:149:67: required from ‘void boost::python::init_base::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedT = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ 149 | detail::define_class_init_helper::apply( | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ 150 | cl | ~~ 151 | , derived().call_policies() | ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | , signature() | ~~~~~~~~~~~~~ 153 | , n_arguments() | ~~~~~~~~~~~~~~~ 154 | , derived().doc_string() | ~~~~~~~~~~~~~~~~~~~~~~~~ 155 | , derived().keywords()); | ~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/boost/python/def_visitor.hpp:31:34: required from ‘static void boost::python::def_visitor_access::visit(const V&, classT&) [with V = boost::python::def_visitor >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional > >; classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ 31 | v.derived_visitor().visit(c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~ /usr/include/boost/python/def_visitor.hpp:67:34: required from ‘void boost::python::def_visitor::visit(classT&) const [with classT = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>; DerivedVisitor = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >]’ 67 | def_visitor_access::visit(*this, c); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /usr/include/boost/python/class.hpp:221:22: required from ‘boost::python::class_::self& boost::python::class_::def(const boost::python::def_visitor&) [with Derived = boost::python::init >&, const scitbx::af::shared&, const boost::python::api::object&, const boost::python::api::object&, boost::python::optional >; W = scitbx::rigid_body::tardy::model<>; X1 = boost::python::bases >; X2 = boost::noncopyable_::noncopyable; X3 = boost::python::detail::not_specified; self = boost::python::class_, boost::python::bases >, boost::noncopyable_::noncopyable>]’ 221 | visitor.visit(*this); | ~~~~~~~~~~~~~^~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:151:13: required from here 146 | class_ >, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 | boost::noncopyable | ~~~~~~~~~~~~~~~~~~ 149 | >("tardy_model", no_init) | ~~~~~~~~~~~~~~~~~~~~~~~~~ 150 | .enable_pickling() | ~~~~~~~~~~~~~~~~~~ 151 | .def(init< | ~~~~^~~~~~ 152 | object const&, | ~~~~~~~~~~~~~~ 153 | af::shared > const&, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 | af::shared const&, | ~~~~~~~~~~~~~~~~~~~~~~ 155 | object const&, | ~~~~~~~~~~~~~~ 156 | object const&, | ~~~~~~~~~~~~~~ 157 | optional >(( | ~~~~~~~~~~~~~~~~~~~~~~~ 158 | arg("labels"), | ~~~~~~~~~~~~~~ 159 | arg("sites"), | ~~~~~~~~~~~~~ 160 | arg("masses"), | ~~~~~~~~~~~~~~ 161 | arg("tardy_tree"), | ~~~~~~~~~~~~~~~~~~ 162 | arg("potential_obj"), | ~~~~~~~~~~~~~~~~~~~~~ 163 | arg("near_singular_hinges_angular_tolerance_deg")=5))) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h:163:36: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare] 163 | SCITBX_ASSERT(body->parent < nc); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/tardy.h:163:9: note: in expansion of macro ‘SCITBX_ASSERT’ 163 | SCITBX_ASSERT(body->parent < nc); | ^~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_ext.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h: In static member function ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h:52:28: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 52 | bp::class_ >(python_name.c_str()) | ^~~~~~~~ In file included from /usr/include/c++/14/memory:78, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h:4: /usr/include/c++/14/bits/unique_ptr.h:59:28: note: declared here 59 | template class auto_ptr; | ^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 1]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:648:13: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::revolute::new_q(const scitbx::af::const_ref&) const [with FloatType = double]’ 648 | af::tiny(q.begin(), q.end()))); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:643:5: required from here 643 | new_q( | ^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::allocator >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = unsigned int; std::string = std::__cxx11::basic_string]’ 68 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 69 | w_t, scitbx::boost_python::container_conversions::set_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_ext.cpp:9:32: required from here 9 | set_wrapper::wrap("unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::set, std::less >, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::set_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_wrapper.h:68:52: required from ‘static void scitbx::stl::boost_python::set_wrapper::wrap(const std::string&) [with ElementType = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]’ 68 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 69 | w_t, scitbx::boost_python::container_conversions::set_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/set_ext.cpp:10:35: required from here 10 | set_wrapper::wrap("stl_string"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 12]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:45:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::rbda_eq_4_13(const scitbx::af::tiny&) [with FloatType = double]’ 45 | return af::tiny(coeffs, coeffs+4*3) * ft(0.5); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:279:21: required from ‘boost::shared_ptr > scitbx::rigid_body::joint_lib::six_dof::time_step_position(const scitbx::af::const_ref&, const ft&) const [with FloatType = double; ft = double]’ 279 | rbda_eq_4_13(unit_quaternion), w_body_frame); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:271:5: required from here 271 | time_step_position( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h: In instantiation of ‘scitbx::af::tiny::tiny(const OtherElementType*, const OtherElementType*) [with OtherElementType = double; ElementType = double; long unsigned int N = 16]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:79:16: required from ‘scitbx::af::tiny scitbx::rigid_body::joint_lib::d_unit_quaternion_d_qe_matrix(const scitbx::af::tiny&) [with FloatType = double]’ 79 | return af::tiny(coeffs, coeffs+4*4) / n3; | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:317:58: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ 317 | af::tiny d = d_unit_quaternion_d_qe_matrix(qe); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:313:5: required from here 313 | tau_as_d_e_pot_d_q( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/tiny_helpers.h:148:20: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 148 | if (last - first != this->size()) throw_range_error(); \ | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:30:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS’ 30 | SCITBX_ARRAY_FAMILY_TINY_CONVENIENCE_CONSTRUCTORS(tiny) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:44:33: required from ‘scitbx::af::small::small(const ElementType*, const ElementType*) [with ElementType = double; long unsigned int N = 7]’ 44 | : base_class(first, last) | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:324:24: required from ‘scitbx::af::small scitbx::rigid_body::joint_lib::six_dof::tau_as_d_e_pot_d_q(const scitbx::af::small&) const [with FloatType = double]’ 324 | af::small result(cn.begin(), cn.end()); | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/joint_lib.h:313:5: required from here 313 | tau_as_d_e_pot_d_q( | ^~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ g++ -o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/symmetry_equivalent.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object/class.hpp:9, from /usr/include/boost/python/class.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = unsigned int; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp:10:35: required from here 10 | vector_wrapper::wrap("unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = double; GetitemReturnValuePolicy = boost::python::return_value_policy; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp:11:33: required from here 11 | vector_wrapper::wrap("double"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector, std::allocator > >; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_wrapper.h:121:52: required from ‘static void scitbx::stl::boost_python::vector_wrapper::wrap(const std::string&) [with ElementType = std::set; GetitemReturnValuePolicy = boost::python::return_internal_reference<>; std::string = std::__cxx11::basic_string]’ 121 | scitbx::boost_python::container_conversions::from_python_sequence< | ^~~~~~~~~~~~~~~~~~~~~ 122 | w_t, | ~~~~ 123 | scitbx::boost_python::container_conversions | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 | ::variable_capacity_policy>(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/stl/vector_ext.cpp:14:50: required from here 14 | vector_wrapper, rir>::wrap("set_unsigned"); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o lib/smtbx_array_family_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_array_family_ext.so.0 smtbx/array_family/af_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so.0'->'lib/smtbx_array_family_ext.so.0.0.1' 'lib/smtbx_array_family_ext.so'->'lib/smtbx_array_family_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_suffixtree_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_shared_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so.0'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' 'lib/scitbx_suffixtree_shared_ext.so'->'lib/scitbx_suffixtree_shared_ext.so.0.0.1' g++ -o smtbx/refinement/boost_python/least_squares_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/boost_python/least_squares_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_minpack_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_minpack_ext.so.0 scitbx/minpack/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_minpack -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_r3_utils_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_r3_utils_ext.so.0 scitbx/r3_utils_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so.0'->'lib/scitbx_minpack_ext.so.0.0.1' 'lib/scitbx_minpack_ext.so'->'lib/scitbx_minpack_ext.so.0.0.1' Create symlinks for: 'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so.0'->'lib/scitbx_r3_utils_ext.so.0.0.1' 'lib/scitbx_r3_utils_ext.so'->'lib/scitbx_r3_utils_ext.so.0.0.1' g++ -o smtbx/refinement/boost_python/weighting_schemes.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/boost_python/weighting_schemes.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/boost_python/least_squares.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/boost_python/least_squares.cpp g++ -o lib/smtbx_ab_initio_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_ab_initio_ext.so.0 smtbx/ab_initio/ab_initio_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/restraints/boost_python/origin_fixing.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/restraints/boost_python/origin_fixing.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so.0'->'lib/smtbx_ab_initio_ext.so.0.0.1' 'lib/smtbx_ab_initio_ext.so'->'lib/smtbx_ab_initio_ext.so.0.0.1' g++ -o smtbx/refinement/restraints/boost_python/restraints_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/restraints/boost_python/restraints_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/stl/map_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/stl/map_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_wigner_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_wigner_ext.so.0 scitbx/wigner/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so.0'->'lib/scitbx_wigner_ext.so.0.0.1' 'lib/scitbx_wigner_ext.so'->'lib/scitbx_wigner_ext.so.0.0.1' g++ -o smtbx/structure_factors/direct/boost_python/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/structure_factors/direct/boost_python/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/structure_factors/direct/boost_python/standard_xray.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/structure_factors/direct/boost_python/standard_xray.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/array_family/flex_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/flex_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/array_family/flex_distl_spot.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/array_family/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/src -Ispotfinder/array_family/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/array_family/flex_distl_spot.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o spotfinder/core_toolbox/boost_python/distltbx_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/distltbx_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_stl_set_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_set_ext.so.0 scitbx/stl/set_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/dxtbx_imageset_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=dxtbx_imageset_ext.so.0 dxtbx/src/dxtbx/boost_python/imageset_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/base/lib -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lm -ltiff -lboost_python312 -lcbf -lhdf5 -lboost_thread -lboost_system -lm -lcctbx -lscitbx_boost_python -ltiff -lboost_python312 -lcbf -lhdf5 g++ -o spotfinder/diffraction/geometry.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/diffraction/geometry.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so.0'->'lib/scitbx_stl_set_ext.so.0.0.1' 'lib/scitbx_stl_set_ext.so'->'lib/scitbx_stl_set_ext.so.0.0.1' g++ -o spotfinder/dxtbx_toolbox/ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/dxtbx_toolbox/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/src -Ispotfinder/dxtbx_toolbox/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/dxtbx_toolbox/ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so.0'->'lib/dxtbx_imageset_ext.so.0.0.1' 'lib/dxtbx_imageset_ext.so'->'lib/dxtbx_imageset_ext.so.0.0.1' g++ -o spotfinder/core_toolbox/boost_python/hough_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/annlib_adaptbx/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/dxtbx/src -I/usr/include/python3.12 -Ispotfinder/core_toolbox/boost_python/src -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/src -Ispotfinder/core_toolbox/boost_python/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/spotfinder/core_toolbox/boost_python/hough_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/std_pair_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=std_pair_ext.so.0 boost_adaptbx/std_pair_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lboost_python312 -lm -lboost_timer g++ -o mmtbx/masks/tst_mask.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/mmtbx/masks/tst_mask.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/boost_python/regression_test_ext.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -DBOOST_PYTHON_MAX_BASES=2 -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/usr/include/python3.12 /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so.0'->'lib/std_pair_ext.so.0.0.1' 'lib/std_pair_ext.so'->'lib/std_pair_ext.so.0.0.1' g++ -o scitbx/array_family/tst_accessors.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_af_1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o lib/scitbx_array_family_shared_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_shared_ext.so.0 scitbx/array_family/boost_python/shared_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 Create symlinks for: 'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so.0'->'lib/scitbx_array_family_shared_ext.so.0.0.1' 'lib/scitbx_array_family_shared_ext.so'->'lib/scitbx_array_family_shared_ext.so.0.0.1' g++ -o scitbx/array_family/tst_af_2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/tiny_plain_apply.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/flex_types.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/smart_ptr/detail/requires_cxx11.hpp:9, from /usr/include/boost/smart_ptr/scoped_array.hpp:13, from /usr/include/boost/scoped_array.hpp:13, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:10: /usr/include/boost/bind.hpp: At global scope: /usr/include/boost/bind.hpp:36:1: note: ‘#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.’ 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::array_exercise::run_2() [with ArrayType = scitbx::af::small_plain]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:619:52: required from here 619 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::small]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:621:46: required from here 621 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::small_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::shared_plain]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared_plain]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:624:48: required from here 624 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i::run_2() [with ArrayType = scitbx::af::shared]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:29:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::shared]’ 29 | run_2(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:629:42: required from here 629 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:70:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::shared_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 70 | for(int i=0;i; VectorType2 = scitbx::af::c_grid<1>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:127:11: required from here 127 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<4>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:145:11: required from here 145 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<2>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:172:11: required from here 172 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::versa_exercise::run_1() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa_plain; AltArrayType = scitbx::af::versa_plain >]’ 415 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:635:64: required from here 634 | versa_exercise, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 | af::versa_plain > >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::c_grid<3>]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:202:11: required from here 202 | verify(__LINE__, a.as_flex_grid().all(), a); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:248:11: required from here 248 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:280:11: required from here 280 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp: In instantiation of ‘static void {anonymous}::versa_exercise::run_1() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:415:12: required from ‘static void {anonymous}::versa_exercise::run() [with ArrayType = scitbx::af::versa; AltArrayType = scitbx::af::versa >]’ 415 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:637:58: required from here 636 | versa_exercise, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 | af::versa > >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:437:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 437 | check_true(__LINE__, a2.end() - a2.begin() == a2.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:438:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 438 | check_true(__LINE__, a3.end() - a3.begin() == a3.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:439:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 439 | check_true(__LINE__, a4.end() - a4.begin() == a4.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:440:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 440 | check_true(__LINE__, a5.end() - a5.begin() == a5.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:441:52: warning: comparison of integer expressions of different signedness: ‘long int’ and ‘scitbx::af::versa_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 441 | check_true(__LINE__, a6.end() - a6.begin() == a6.size()); | ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:326:11: required from here 326 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp: In instantiation of ‘void {anonymous}::verify(long int, const VectorType1&, const VectorType2&) [with VectorType1 = scitbx::af::small; VectorType2 = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_accessors.cpp:371:11: required from here 371 | verify(__LINE__, a.as_flex_grid().all(), a.all()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_helpers.cpp:17:18: warning: comparison of integer expressions of different signedness: ‘const long int’ and ‘const long unsigned int’ [-Wsign-compare] 17 | if (v[i] != a[i]) { | ~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/small_plain_apply.h:15, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In instantiation of ‘scitbx::af::small_plain::small_plain(const ElementType*, const ElementType*) [with ElementType = int; long unsigned int N = 128]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:41:17: required from ‘static void {anonymous}::array_exercise::run_1() [with ArrayType = scitbx::af::small_plain]’ 41 | ArrayType a5(a4.begin(), a4.begin()); | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:28:12: required from ‘static void {anonymous}::array_exercise::run() [with ArrayType = scitbx::af::small_plain]’ 28 | run_1(); | ~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_1.cpp:619:52: required from here 619 | array_exercise >::run(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:59:15: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘long int’ [-Wsign-compare] 59 | if (N < last - first) throw_range_error(); | ~~^~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_matrix.h:4: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::vec3]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/14/memory:69, from /usr/include/boost/config/no_tr1/memory.hpp:21, from /usr/include/boost/get_pointer.hpp:14, from /usr/include/boost/python/object/pointer_holder.hpp:11, from /usr/include/boost/python/to_python_indirect.hpp:10, from /usr/include/boost/python/converter/arg_to_python.hpp:10, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/array_as_list.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/rigid_body/ext.cpp:3: /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::vec3&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::vec3*; _Size = long unsigned int; _Tp = scitbx::vec3]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In constructor ‘scitbx::af::shared_plain::shared_plain(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:34: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/14/bits/stl_uninitialized.h:312:5: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘_ForwardIterator std::uninitialized_fill_n(_ForwardIterator, _Size, const _Tp&) [with _ForwardIterator = scitbx::af::tiny*; _Size = long unsigned int; _Tp = scitbx::af::tiny]’ declared here 312 | uninitialized_fill_n(_ForwardIterator __first, _Size __n, const _Tp& __x) | ^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:132:48: note: ‘’ declared here 132 | std::uninitialized_fill_n(begin(), sz, ElementType()); | ^~~~~~~~~~~~~ g++ -o lib/scitbx_random_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_random_ext.so.0 scitbx/random/boost_python/random_ext.o scitbx/random/boost_python/basic_distributions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/flex_grid.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_2.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_4.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_4.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_af_5.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_5.cpp g++ -o scitbx/array_family/tst_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_mat3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so.0'->'lib/scitbx_random_ext.so.0.0.1' 'lib/scitbx_random_ext.so'->'lib/scitbx_random_ext.so.0.0.1' g++ -o scitbx/array_family/tst_optional_copy.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_optional_copy.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_rectangular_full_packed.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_ref_matrix_facet.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_ref_matrix_facet.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_3.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_sym_mat3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_sym_mat3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_unsigned_float_arithmetic.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_vec3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/usr/include -Iscitbx/array_family -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_vec3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_mat3.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:31, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_optional_copy.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_5.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_ref_matrix_facet.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/simple_io.h:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_af_4.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/accessors/rectangular_full_packed.h:3, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_af_2 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/error/tst_error.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/error -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error/tst_error.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/array_family/tiny_algebra.h:14, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_unsigned_float_arithmetic.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp: In function ‘int main()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_rectangular_full_packed.cpp:52:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 52 | for(int i=0; i::resize(const size_type&) [with ElementType = scitbx::af::tiny]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:15: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 175 | resize(new_size, ElementType()); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:165:12: note: by argument 3 of type ‘const scitbx::af::tiny&’ to ‘void scitbx::af::shared_plain::resize(const size_type&, const ElementType&) [with ElementType = scitbx::af::tiny]’ declared here 165 | void resize(size_type const& new_size, ElementType const& x) { | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/push_back_etc.h:175:26: note: ‘’ declared here 175 | resize(new_size, ElementType()); | ^~~~~~~~~~~~~ g++ -o scitbx/fftpack/timing/test0.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/timing/test0.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/mat3.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sym_mat3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_sym_mat3.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/vec3.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tst_vec3.cpp:2: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_unsigned_float_arithmetic -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_unsigned_float_arithmetic.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/array_family/tst_ref_matrix_facet -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_ref_matrix_facet.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o lib/scitbx_stl_vector_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_vector_ext.so.0 scitbx/stl/vector_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/array_family/tst_rectangular_full_packed -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_rectangular_full_packed.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/error/tst_error -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/error/tst_error.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/lbfgs/sdrive_fem.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable scitbx/lbfgs/sdrive_fem.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/lbfgs/tst_lbfgs.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgs/tst_lbfgs.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_ptr.hpp:25, from /usr/include/boost/shared_ptr.hpp:17, from /usr/include/boost/python/converter/shared_ptr_to_python.hpp:12, from /usr/include/boost/python/converter/arg_to_python.hpp:15, from /usr/include/boost/python/call.hpp:15, from /usr/include/boost/python/object_core.hpp:14, from /usr/include/boost/python/object.hpp:9, from /usr/include/boost/python/list.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::vector; ConversionPolicy = scitbx::boost_python::container_conversions::variable_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:156:78: required from here 156 | scitbx::boost_python::container_conversions::variable_capacity_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = std::__cxx11::list; ConversionPolicy = scitbx::boost_python::container_conversions::linked_list_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:160:72: required from here 160 | scitbx::boost_python::container_conversions::linked_list_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:164:71: required from here 164 | scitbx::boost_python::container_conversions::fixed_size_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = boost::array; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_size_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:168:71: required from here 168 | scitbx::boost_python::container_conversions::fixed_size_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/lbfgsb/dev/driver1.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver1.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h: In instantiation of ‘static void* scitbx::boost_python::container_conversions::from_python_sequence::convertible(PyObject*) [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy; PyObject = _object]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:146:9: required from ‘scitbx::boost_python::container_conversions::from_python_sequence::from_python_sequence() [with ContainerType = scitbx::af::small; ConversionPolicy = scitbx::boost_python::container_conversions::fixed_capacity_policy]’ 146 | &convertible, | ^~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/boost_python/regression_test_ext.cpp:172:75: required from here 172 | scitbx::boost_python::container_conversions::fixed_capacity_policy>(); | ^ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/boost_python/container_conversions.h:197:33: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 197 | if (!is_range) assert(i == obj_size); | ~~^~~~~~~~~~~ g++ -o scitbx/lbfgsb/dev/driver2.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver2.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ Create symlinks for: 'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so.0'->'lib/scitbx_stl_vector_ext.so.0.0.1' 'lib/scitbx_stl_vector_ext.so'->'lib/scitbx_stl_vector_ext.so.0.0.1' g++ -o scitbx/lbfgsb/dev/driver3.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver3.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/io.hpp:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/close_chain.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem.hpp:10, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include/scitbx/lbfgs_fem.hpp:1, from scitbx/lbfgs/sdrive_fem.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp: In member function ‘virtual void fem::utils::simple_ostream_to_char_ptr_and_size::put(char)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/simple_streams.hpp:63:13: warning: comparison of integer expressions of different signedness: ‘fem::ssize_t’ {aka ‘long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 63 | if (i < sz) s[i++] = c; | ~~^~~~ g++ -o scitbx/array_family/tst_af_3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp: In member function ‘void fem::common::getarg(int, fem::str_ref) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/common.hpp:40:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 40 | if (pos < 0 || pos >= command_line_args.buffer.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double_fmt.hpp:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:9: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp: In member function ‘void fem::utils::string_to_double::convert(fem::utils::simple_istream&, unsigned int, int)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/string_to_double.hpp:115:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const unsigned int’ [-Wsign-compare] 115 | if (dexp <= ad_hoc_limits::max_digit_count) { | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp: In member function ‘double fem::read_loop::read_fmt_double()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/read.hpp:653:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 653 | if (iw+1 != ed.size()) { | ~~~~~^~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/variant.hpp:5, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:7: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp: In member function ‘void fem::utils::equivalence::array_alignment::infer_diffs0_from_diff_matrix()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/utils/equivalence.hpp:93:28: warning: comparison of integer expressions of different signedness: ‘const fem::ssize_t’ {aka ‘const long int’} and ‘fem::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 93 | if (c0e[0] == i0) { | ~~~~~~~^~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/major_types.hpp:8: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp: In destructor ‘fem::write_loop::~write_loop()’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/fable/fem/write.hpp:704:24: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 704 | while (pos < internal_file_len) { | ~~~~^~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_types.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/complex_to_complex.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/complex_to_complex_3d.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/timing/test0.cpp:3: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/math/tests/tst.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/math/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/tests/tst.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_types.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/complex_to_complex.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/timing/fftpack_timer.cpp:6: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/matrix/tests/tst_cholesky.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests/tst_cholesky.cpp /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘ElementType& scitbx::af::versa_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h: In member function ‘const ElementType& scitbx::af::versa_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/versa_plain.h:161:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 161 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(versa_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h: In constructor ‘scitbx::fftpack::factorization::factorization(std::size_t, bool)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:64:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 64 | for (i = 0; red_n > 1 && i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/fftpack/factorization.h:67:19: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::tiny_plain::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 67 | for (i = 0; i < opt_factors.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_accessors -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_accessors.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_givens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests/tst_givens.cpp g++ -o scitbx/array_family/tst_vec3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_vec3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_af_5 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_5.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/matrix/tests/tst_householder.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests/tst_householder.cpp g++ -o scitbx/array_family/tst_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/array_family/tst_optional_copy -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_optional_copy.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_svd.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/matrix/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/matrix/tests/tst_svd.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o scitbx/serialization/tst_base_256.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -Wall -Wno-unknown-pragmas -Wno-parentheses -Winit-self -Wno-unused-local-typedefs -Werror=vla -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/serialization -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/serialization /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/serialization/tst_base_256.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/sparse/tests/tst_sparse.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Iscitbx/sparse/tests -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/tests /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/sparse/tests/tst_sparse.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/ref.h:8, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:6, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver3.cpp:1: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘ElementType& scitbx::af::tiny_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h: In member function ‘const ElementType& scitbx::af::tiny_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/tiny_plain.h:48:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 48 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(tiny_plain, elems, N) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o scitbx/lbfgs/tst_lbfgs -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/tst_lbfgs.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/tests/tst_reparametrisation.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘ElementType& scitbx::af::shared_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:102:19: required from here 102 | write_ref1(" ", x); | ~~~~~~~~~~^~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver2.cpp:70:11: required from here 70 | setulb( | ~~~~~~^ 71 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘ElementType& scitbx::af::small_plain::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h: In member function ‘const ElementType& scitbx::af::small_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/small_plain.h:107:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 107 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(small_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error.h:16, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/serialization/base_256.h:2, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/math/floating_point_epsilon.h:4, from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:5: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here 69 | setulb( | ~~~~~~^ 70 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/lbfgs/sdrive_fem -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgs/sdrive_fem.o scitbx/lbfgs/lbfgs_fem.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:974:19: required from ‘void scitbx::lbfgsb::raw::prn3lb(const int&, const ref1&, const FloatType&, const std::string&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const int&, const FloatType&, const FloatType&, const int&, const std::string&, const int&, const FloatType&, const FloatType&, const int&, const FloatType&, const FloatType&, const FloatType&) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 974 | write_ref1(" X =", x); | ~~~~~~~~~~^~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3786:15: required from ‘void scitbx::lbfgsb::raw::mainlb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 3786 | prn3lb(n,x,f,task,iprint,info,itfile, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3787 | iter,nfgv,nintol,nskip,nact,sbgnrm, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3788 | zero,nint,word,iback,stp,xstep,k, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3789 | cachyt,sbtime,lnscht); | ~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver1.cpp:69:11: required from here 69 | setulb( | ~~~~~~^ 70 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j::at(size_type)’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:62:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 62 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h: In member function ‘const ElementType& scitbx::af::shared_plain::at(size_type) const’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:3: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/detail/ref_helpers.h:65:37: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 65 | if (i >= sz) throw_range_error(); return beg[i]; \ | ^~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/array_family/shared_plain.h:277:7: note: in expansion of macro ‘SCITBX_ARRAY_FAMILY_BEGIN_END_ETC’ 277 | SCITBX_ARRAY_FAMILY_BEGIN_END_ETC(shared_plain, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -o smtbx/refinement/constraints/tests/tst_special_position.o -c -g -O2 -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -I/usr/include/hdf5/serial -DBOOST_TIMER_ENABLE_DEPRECATED=1 -std=c++14 -pthread -fPIC -fno-strict-aliasing -w -g -O0 -fno-inline -DBOOST_ALL_NO_LIB -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_/include -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 -I/usr/include -Ismtbx/refinement/constraints -I/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/smtbx/refinement/constraints/tests/tst_special_position.cpp cc1plus: warning: ‘-Werror=’ argument ‘-Werror=implicit-function-declaration’ is not valid for C++ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h: In instantiation of ‘void scitbx::lbfgsb::raw::write_ref1(const std::string&, const ref1&, const char*) [with ElementType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver3.cpp:82:19: required from here 82 | write_ref1(" ", wa.get1(j+1,n)); | ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:184:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 184 | for(int i=1;i<=a.size();i++) { | ~^~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:188:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::__cxx11::basic_string::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 188 | for(int j=0;j&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref2&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’: /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:4433:11: required from ‘void scitbx::lbfgsb::raw::setulb(const int&, const int&, const ref1&, const ref1&, const ref1&, const ref1&, FloatType&, const ref1&, const FloatType&, const FloatType&, const ref1&, const ref1&, std::string&, const int&, std::string&, const ref1&, const ref1&, const ref1&, bool) [with FloatType = double; std::string = std::__cxx11::basic_string]’ 4433 | mainlb(n,m,x,l,u,nbd,f,g,factr,pgtol, | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 4434 | wa.get2(lws, n, m), | ~~~~~~~~~~~~~~~~~~~ 4435 | wa.get2(lwy, n, m), | ~~~~~~~~~~~~~~~~~~~ 4436 | wa.get2(lsy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4437 | wa.get2(lss, m, m), | ~~~~~~~~~~~~~~~~~~~ 4438 | wa.get2(lyy, m, m), | ~~~~~~~~~~~~~~~~~~~ 4439 | wa.get2(lwt, m, m), | ~~~~~~~~~~~~~~~~~~~ 4440 | wa.get2(lwn, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~ 4441 | wa.get2(lsnd, 2*m, 2*m), | ~~~~~~~~~~~~~~~~~~~~~~~~ 4442 | wa.get1(lz, n), | ~~~~~~~~~~~~~~~ 4443 | wa.get1(lr, n), | ~~~~~~~~~~~~~~~ 4444 | wa.get1(ld, n), | ~~~~~~~~~~~~~~~ 4445 | wa.get1(lt, n), | ~~~~~~~~~~~~~~~ 4446 | wa.get1(lwa, 8*m), | ~~~~~~~~~~~~~~~~~~ 4447 | wa.get1(lsg, m), | ~~~~~~~~~~~~~~~~ 4448 | wa.get1(lsgo, m), | ~~~~~~~~~~~~~~~~~ 4449 | wa.get1(lyg, m), | ~~~~~~~~~~~~~~~~ 4450 | wa.get1(lygo, m), | ~~~~~~~~~~~~~~~~~ 4451 | iwa.get1(1, n), | ~~~~~~~~~~~~~~~ 4452 | iwa.get1(n+1, n), | ~~~~~~~~~~~~~~~~~ 4453 | iwa.get1(2*n+1, n), | ~~~~~~~~~~~~~~~~~~~ 4454 | task,iprint,csave,lsave, | ~~~~~~~~~~~~~~~~~~~~~~~~ 4455 | ref1(&isave(22), 23), | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 4456 | dsave, | ~~~~~~ 4457 | enable_stp_init); | ~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/dev/driver3.cpp:72:11: required from here 72 | setulb( | ~~~~~~^ 73 | n,m,x,l,u,nbd,f,g,factr,pgtol,wa,iwa,task,iprint, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 | csave,lsave,isave,dsave); | ~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3671 | SCITBX_ASSERT(x.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3671:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3671 | SCITBX_ASSERT(x.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3672 | SCITBX_ASSERT(l.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3672:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3672 | SCITBX_ASSERT(l.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3673 | SCITBX_ASSERT(u.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3673:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3673 | SCITBX_ASSERT(u.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:30: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3674 | SCITBX_ASSERT(nbd.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3674:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3674 | SCITBX_ASSERT(nbd.size() == n); | ^~~~~~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:28: warning: comparison of integer expressions of different signedness: ‘scitbx::af::const_ref::size_type’ {aka ‘long unsigned int’} and ‘const int’ [-Wsign-compare] 3675 | SCITBX_ASSERT(g.size() == n); /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/error_utils.h:166:9: note: in definition of macro ‘SCITBX_ERROR_UTILS_ASSERT’ 166 | if (!(assertion)) throw error_class(__FILE__, __LINE__, \ | ^~~~~~~~~ /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/scitbx/lbfgsb/raw.h:3675:5: note: in expansion of macro ‘SCITBX_ASSERT’ 3675 | SCITBX_ASSERT(g.size() == n); | ^~~~~~~~~~~~~ g++ -o scitbx/array_family/tst_sym_mat3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_sym_mat3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/math/tests/tst -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/math/tests/tst.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o lib/smtbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_stl_map_ext.so.0 smtbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so.0'->'lib/smtbx_stl_map_ext.so.0.0.1' 'lib/smtbx_stl_map_ext.so'->'lib/smtbx_stl_map_ext.so.0.0.1' g++ -o mmtbx/masks/tst_mask -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread mmtbx/masks/tst_mask.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lmmtbx_masks -liotbx_pdb -lcctbx -lomptbx -lcctbx_sgtbx_asu -lm g++ -o scitbx/array_family/tst_af_1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/serialization/tst_base_256 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/serialization/tst_base_256.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm g++ -o scitbx/matrix/tests/tst_givens -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_givens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o lib/scitbx_suffixtree_single_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_suffixtree_single_ext.so.0 scitbx/suffixtree/boost_python/suffixtree_single_ext.o scitbx/suffixtree/boost_python/object_extensions.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so.0'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' 'lib/scitbx_suffixtree_single_ext.so'->'lib/scitbx_suffixtree_single_ext.so.0.0.1' g++ -o lib/scitbx_sparse_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_sparse_ext.so.0 scitbx/sparse/boost_python/vector.o scitbx/sparse/boost_python/matrix.o scitbx/sparse/boost_python/approx_equal.o scitbx/sparse/boost_python/random.o scitbx/sparse/boost_python/lu_factorization.o scitbx/sparse/boost_python/sparse_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/spotfinder_hough_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_hough_ext.so.0 spotfinder/core_toolbox/boost_python/hough_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so.0'->'lib/spotfinder_hough_ext.so.0.0.1' 'lib/spotfinder_hough_ext.so'->'lib/spotfinder_hough_ext.so.0.0.1' Create symlinks for: 'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so.0'->'lib/scitbx_sparse_ext.so.0.0.1' 'lib/scitbx_sparse_ext.so'->'lib/scitbx_sparse_ext.so.0.0.1' g++ -o scitbx/fftpack/timing/fftpack_timer -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/fftpack_timer.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/lbfgsb/dev/driver2 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver2.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/lbfgsb/dev/driver1 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver1.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_timer -lboost_chrono -lm g++ -o scitbx/array_family/boost_python/regression_test_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=regression_test_ext.so.0 scitbx/array_family/boost_python/regression_test_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 g++ -o scitbx/lbfgsb/dev/driver3 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/lbfgsb/dev/driver3.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_timer -lboost_chrono -lm Create symlinks for: 'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so.0'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' 'scitbx/array_family/boost_python/regression_test_ext.so'->'scitbx/array_family/boost_python/regression_test_ext.so.0.0.1' g++ -o scitbx/fftpack/timing/test0 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/fftpack/timing/test0.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system -lomptbx -lm g++ -o scitbx/matrix/tests/tst_cholesky -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_cholesky.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_svd -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_svd.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/matrix/tests/tst_householder -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/matrix/tests/tst_householder.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o scitbx/sparse/tests/tst_sparse -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/sparse/tests/tst_sparse.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lboost_thread -lboost_system g++ -o lib/scitbx_math_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_math_ext.so.0 scitbx/math/boost_python/math_ext.o scitbx/math/boost_python/basic_statistics.o scitbx/math/boost_python/gaussian.o scitbx/math/boost_python/golay.o scitbx/math/boost_python/minimum_covering_sphere.o scitbx/math/boost_python/principal_axes_of_inertia.o scitbx/math/boost_python/row_echelon.o scitbx/math/boost_python/tensor_rank_2.o scitbx/math/boost_python/chebyshev.o scitbx/math/boost_python/icosahedron.o scitbx/math/boost_python/slatec.o scitbx/math/boost_python/line_search.o scitbx/math/boost_python/r3_rotation.o scitbx/math/boost_python/resample.o scitbx/math/boost_python/quadrature.o scitbx/math/boost_python/unimodular_generator.o scitbx/math/boost_python/halton.o scitbx/math/boost_python/least_squares_plane.o scitbx/math/boost_python/continued_fraction.o scitbx/math/boost_python/numeric_limits.o scitbx/math/boost_python/distributions.o scitbx/math/boost_python/exp_functions.o scitbx/math/boost_python/zernike.o scitbx/math/boost_python/zernike_moments.o scitbx/math/boost_python/2d_zernike_moments.o scitbx/math/boost_python/weighted_covariance.o scitbx/math/boost_python/rotation.o scitbx/math/boost_python/interpolation.o scitbx/math/boost_python/tetrahedron.o scitbx/math/boost_python/angle_derivative.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_slatec -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_rigid_body_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_rigid_body_ext.so.0 scitbx/rigid_body/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/scitbx_stl_map_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_stl_map_ext.so.0 scitbx/stl/map_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/spotfinder_dxtbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_dxtbx_ext.so.0 spotfinder/dxtbx_toolbox/ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -ldxtbxspotfinder -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so.0'->'lib/scitbx_stl_map_ext.so.0.0.1' 'lib/scitbx_stl_map_ext.so'->'lib/scitbx_stl_map_ext.so.0.0.1' Create symlinks for: 'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so.0'->'lib/spotfinder_dxtbx_ext.so.0.0.1' 'lib/spotfinder_dxtbx_ext.so'->'lib/spotfinder_dxtbx_ext.so.0.0.1' Create symlinks for: 'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so.0'->'lib/scitbx_rigid_body_ext.so.0.0.1' 'lib/scitbx_rigid_body_ext.so'->'lib/scitbx_rigid_body_ext.so.0.0.1' g++ -o smtbx/refinement/constraints/tests/tst_geometrical_hydrogens -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_reparametrisation -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_reparametrisation.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system g++ -o smtbx/refinement/constraints/tests/tst_special_position -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread smtbx/refinement/constraints/tests/tst_special_position.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lsmtbx_refinement_constraints -lboost_thread -lboost_system Create symlinks for: 'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so.0'->'lib/scitbx_math_ext.so.0.0.1' 'lib/scitbx_math_ext.so'->'lib/scitbx_math_ext.so.0.0.1' g++ -o lib/smtbx_refinement_restraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_restraints_ext.so.0 smtbx/refinement/restraints/boost_python/origin_fixing.o smtbx/refinement/restraints/boost_python/restraints_ext.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so.0'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' 'lib/smtbx_refinement_restraints_ext.so'->'lib/smtbx_refinement_restraints_ext.so.0.0.1' g++ -o lib/spotfinder_distltbx_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_distltbx_ext.so.0 spotfinder/core_toolbox/boost_python/distltbx_ext.o spotfinder/diffraction/geometry.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so.0'->'lib/spotfinder_distltbx_ext.so.0.0.1' 'lib/spotfinder_distltbx_ext.so'->'lib/spotfinder_distltbx_ext.so.0.0.1' g++ -o lib/smtbx_refinement_constraints_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_constraints_ext.so.0 smtbx/refinement/constraints/boost_python/affine.o smtbx/refinement/constraints/boost_python/constraints_ext.o smtbx/refinement/constraints/boost_python/direction.o smtbx/refinement/constraints/boost_python/geometrical_hydrogens.o smtbx/refinement/constraints/boost_python/independent_scalar_parameters.o smtbx/refinement/constraints/boost_python/occupancy.o smtbx/refinement/constraints/boost_python/reparametrisation.o smtbx/refinement/constraints/boost_python/rigid.o smtbx/refinement/constraints/boost_python/same_group.o smtbx/refinement/constraints/boost_python/scaled_adp.o smtbx/refinement/constraints/boost_python/scatterer_parameters.o smtbx/refinement/constraints/boost_python/shared.o smtbx/refinement/constraints/boost_python/special_position.o smtbx/refinement/constraints/boost_python/symmetry_equivalent.o smtbx/refinement/constraints/boost_python/u_eq_dependent_u_iso.o smtbx/refinement/constraints/boost_python/u_iso_dependent_u_iso.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o scitbx/array_family/tst_af_4 -rdynamic -Wl,-z,relro -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 -std=c++14 -pthread scitbx/array_family/tst_af_4.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lm Create symlinks for: 'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so.0'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' 'lib/smtbx_refinement_constraints_ext.so'->'lib/smtbx_refinement_constraints_ext.so.0.0.1' g++ -o lib/smtbx_structure_factors_direct_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_structure_factors_direct_ext.so.0 smtbx/structure_factors/direct/boost_python/ext.o smtbx/structure_factors/direct/boost_python/standard_xray.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so.0'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' 'lib/smtbx_structure_factors_direct_ext.so'->'lib/smtbx_structure_factors_direct_ext.so.0.0.1' g++ -o lib/smtbx_refinement_least_squares_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=smtbx_refinement_least_squares_ext.so.0 smtbx/refinement/boost_python/least_squares_ext.o smtbx/refinement/boost_python/weighting_schemes.o smtbx/refinement/boost_python/least_squares.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lsmtbx_refinement_constraints -lscitbx_boost_python -lcctbx -lboost_thread -lboost_system -lboost_python312 -lm g++ -o lib/spotfinder_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=spotfinder_array_family_flex_ext.so.0 spotfinder/array_family/flex_ext.o spotfinder/array_family/flex_distl_spot.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lspotfinder -lomptbx -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm Create symlinks for: 'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so.0'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' 'lib/smtbx_refinement_least_squares_ext.so'->'lib/smtbx_refinement_least_squares_ext.so.0.0.1' Create symlinks for: 'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so.0'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' 'lib/spotfinder_array_family_flex_ext.so'->'lib/spotfinder_array_family_flex_ext.so.0.0.1' g++ -o lib/scitbx_array_family_flex_ext.so.0.0.1 -shared -rdynamic -std=c++14 -Wl,-soname=scitbx_array_family_flex_ext.so.0 scitbx/array_family/boost_python/flex_ext.o scitbx/array_family/boost_python/flex_grid.o scitbx/array_family/boost_python/flex_bool.o scitbx/array_family/boost_python/flex_size_t.o scitbx/array_family/boost_python/flex_int.o scitbx/array_family/boost_python/flex_float.o scitbx/array_family/boost_python/flex_double.o scitbx/array_family/boost_python/flex_double_matrix.o scitbx/array_family/boost_python/flex_complex_double.o scitbx/array_family/boost_python/flex_std_string.o scitbx/array_family/boost_python/flex_random.o scitbx/array_family/boost_python/flex_sort.o scitbx/array_family/boost_python/flex_histogram.o scitbx/array_family/boost_python/flex_weighted_histogram.o scitbx/array_family/boost_python/flex_mean_and_variance.o scitbx/array_family/boost_python/flex_median.o scitbx/array_family/boost_python/flex_linear_interpolation.o scitbx/array_family/boost_python/flex_vec3_double.o scitbx/array_family/boost_python/flex_vec2_double.o scitbx/array_family/boost_python/flex_vec3_int.o scitbx/array_family/boost_python/flex_sym_mat3_double.o scitbx/array_family/boost_python/flex_mat3_double.o scitbx/array_family/boost_python/flex_tiny_size_t_2.o scitbx/array_family/boost_python/loops.o scitbx/array_family/boost_python/show_sizes.o scitbx/array_family/boost_python/numpy_bridge.o -L/usr/lib -L/usr/lib64 -L/usr/lib/x86_64-linux-gnu -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -Llib -L/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/lib -lscitbx_boost_python -lboost_thread -lboost_system -lboost_python312 -lm -lboost_numpy312 Create symlinks for: 'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so.0'->'lib/scitbx_array_family_flex_ext.so.0.0.1' 'lib/scitbx_array_family_flex_ext.so'->'lib/scitbx_array_family_flex_ext.so.0.0.1' scons: done building targets. usr+sys time: 53.42 seconds wall clock time: 19 minutes 46.23 seconds (1186.23 seconds total) iconv -f ISO-8859-1 -t UTF-8 cctbx/eltbx/covalent_radii.h > covalent_radii.h mv covalent_radii.h cctbx/eltbx/covalent_radii.h # cp all extensions into the python build directory # special case for an extension used during test dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cp -f {build_dir}_/lib/*_ext.so {build_dir}_/scitbx/array_family/boost_python/regression_test_ext.so {build_dir}" I: pybuild base:311: cp -f '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_/lib/*_ext.so '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_/scitbx/array_family/boost_python/regression_test_ext.so '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build' # cp the dxtbx pybind11 extension at the right place. dh_auto_build -- -s custom --build-args="cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=cp -f {build_dir}_/lib/dxtbx_flumpy.so {build_dir}" I: pybuild base:311: cp -f '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_/lib/dxtbx_flumpy.so '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build' make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' # DOES NOT WORK, source code must be modified in order to find the expected # /usr/share/cctbx libtbx_env file during the build process make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/libcctbx0.substvars debian/libcctbx-dev.substvars debian/python3-cctbx.substvars rm -fr -- debian/.debhelper/generated/libcctbx0/ debian/libcctbx0/ debian/tmp/ debian/.debhelper/generated/libcctbx-dev/ debian/libcctbx-dev/ debian/.debhelper/generated/python3-cctbx/ debian/python3-cctbx/ debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' # install the cctbx python modules dh_auto_install install -m0755 -d /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 --dest-dir /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp' running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py copying ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx copying annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx copying annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators copying annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators running install_lib creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/farey.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/fastentrypoints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/subversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/pytest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/log.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_disorder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_direction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_same_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/conftest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/development.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages creating /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/watch_file.py to watch_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/glu.py to glu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl.py to gl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/fonts.py to fonts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/images.py to images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/quadrics.py to quadrics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/read.py to read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/cout.py to cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/read.py to read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/cout.py to cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/split.py to split.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout.py to tst_cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_read.py to tst_read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tokenization.py to tokenization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/intrinsics.py to intrinsics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/equivalence.py to equivalence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/frames.py to frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/python.py to python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/clashes.py to clashes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/grow_density.py to grow_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/find.py to find.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen.py to tst_add_hydrogen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/standard_geometry_cif.py to standard_geometry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_standard_geometry_cif.py to tst_standard_geometry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/identify.py to identify.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/environment.py to environment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/build.py to build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/halides.py to halides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/group.py to group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights.py to weights.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/data.py to data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/orca.py to orca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/targets.py to targets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/proq2.py to proq2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/msa.py to msa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/super.py to super.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maps.py to maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/f000.py to f000.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/angle.py to angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls.py to tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/topology.py to topology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/clash.py to clash.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/asa.py to asa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/waters.py to waters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip.py to xmanip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_make_library.py to tst_make_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/make_library.py to make_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suites.py to suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absences.py to absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fem.py to fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/kick.py to kick.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/lattice.py to lattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/refinement.py to refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/output.py to output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/server.py to server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tools.py to tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/arrays.py to arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain_cif.py to tst_minimize_chain_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/mp.py to mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/weather.py to weather.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/drift.py to drift.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/split_detector.py to split_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/striping.py to striping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/metrology.py to metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/weather.py to weather.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/riso.py to riso.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/drift.py to drift.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/graph.py to graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/components.py to components.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/api.py to api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster.py to cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/trial.py to trial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/run.py to run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/job.py to job.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/task.py to task.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/tag.py to tag.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/stats.py to stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark0.py to mark0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark1.py to mark1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark10.py to mark10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark3.py to mark3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/application.py to application.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/worker.py to worker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:777: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:792: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:793: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:812: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:831: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:860: SyntaxWarning: invalid escape sequence '\m' byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/absorption.py to absorption.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/refine.py to refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/simulate.py to simulate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/isoform.py to isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minimizers.py to minimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/set.py to set.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/vector.py to vector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minpack.py to minpack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/clustering.py to clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/besselk.py to besselk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/spe.py to spe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/distributions.py to distributions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/farey.py to farey.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/simplex.py to simplex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/shared.py to shared.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/functions.py to functions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/svd.py to svd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/householder.py to householder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/misc.py to misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_utils.py to random_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/single.py to single.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/fftpack.py to fftpack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/optional.py to optional.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/smoothing.py to smoothing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/console_utils.py to console_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/simplexml.py to simplexml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/dlite.py to dlite.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py to fastentrypoints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cli.py to cli.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/callbacks.py to callbacks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/containers.py to containers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/path.py to path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/complex_math.py to complex_math.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/smart_open.py to smart_open.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install.py to install.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/help.py to help.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/scons.py to scons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_path.py to tst_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyframe.py to pyframe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/introspection.py to introspection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/load_env.py to load_env.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_template.py to program_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/interface.py to interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/parser.py to parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/experimental.py to experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subversion.py to subversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cluster.py to cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/math_utils.py to math_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_version.py to tst_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/env_config.py to env_config.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/wingide.py to wingide.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/result.py to result.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/binary_search.py to binary_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/str_utils.py to str_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/configure.py to configure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyplot.py to pyplot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/table_utils.py to table_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_run.py to easy_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/timers.py to timers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/citations.py to citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/objgraph.py to objgraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/progress.py to progress.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/pytest.py to pytest.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/log.py to log.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/result.py to result.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/icons.py to icons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/blast.py to blast.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/process_control.py to process_control.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/tables.py to tables.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/windows.py to windows.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/listeditor.py to listeditor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/app.py to app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/monitor.py to monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/layout.py to layout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/b_plot.py to b_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon.py to polygon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/path.py to path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/browser.py to browser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/info_panels.py to info_panels.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nexus.py to nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Format.py to Format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/image.py to image.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Registry.py to Registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/load.py to load.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/filename.py to filename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/xds.py to xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/datablock.py to datablock.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/overload.py to overload.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache.py to filecache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/beam.py to beam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/profile.py to profile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector.py to detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/crystal.py to crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan.py to scan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/compare.py to compare.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/imageset.py to imageset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/flumpy.py to flumpy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/solver.py to solver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/create.py to create.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/frame.py to frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/integration.py to integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/display.py to display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/processing.py to processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/controls.py to controls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/scope.py to scope.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/preferences.py to preferences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/device.py to device.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/time.py to time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pymol.py to pymol.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/format.py to format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/builders.py to builders.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/citations.py to citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/validation.py to validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/emma.py to emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/mar.py to mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/edf.py to edf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/noir.py to noir.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/npy.py to npy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_plots.py to data_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/writer.py to writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/symmetry.py to symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders.py to builders.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xparm.py to xparm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/correction.py to correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ranges.py to ranges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/poscar.py to poscar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/logfiles.py to logfiles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/wildcard.py to wildcard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/table_one.py to table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phases.py to phases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/models.py to models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/file_reader.py to file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/download.py to download.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py to utils.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:8: SyntaxWarning: invalid escape sequence '\{' /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/' byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/records.py to records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/common.py to common.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_manager.py to map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/run.py to run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/multipolar.py to multipolar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/dev.py to dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/display.py to display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_examples.py to run_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/formula.py to formula.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/henke.py to henke.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mem.py to mem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/box.py to box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/emma.py to emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/replay.py to replay.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/shelx.py to shelx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure.py to structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/math_module.py to math_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/translation_search.py to translation_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/location_part.py to location_part.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/github.py to github.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adptbx.py to adptbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache.py to apache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/exception.py to exception.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_disorder.py to test_disorder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_direction.py to test_direction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_occupancies.py to test_occupancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_rigid.py to test_rigid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_same_group.py to test_same_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/masks.py to masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/refine.py to refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/conftest.py to conftest.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/development.py to development.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc running install_egg_info running egg_info creating cctbx.egg-info writing cctbx.egg-info/PKG-INFO writing dependency_links to cctbx.egg-info/dependency_links.txt writing requirements to cctbx.egg-info/requires.txt writing top-level names to cctbx.egg-info/top_level.txt writing manifest file 'cctbx.egg-info/SOURCES.txt' reading manifest file 'cctbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' writing manifest file 'cctbx.egg-info/SOURCES.txt' Copying cctbx.egg-info to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx-2023.12.egg-info Skipping SOURCES.txt running install_scripts # install the dxtbx python modules dh_auto_install --sourcedirectory=dxtbx install -m0755 -d /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 --dir dxtbx --dest-dir /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp I: pybuild base:311: /usr/bin/python3 setup.py install --root '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp' Found 21 dxtbx dispatchers Found 139 Format classes running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running install_lib copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_simage_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_scaling_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_flumpy.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_math_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_orientation_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_pair_interaction_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_fftpack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_simulation_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_symmetry_constraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/xmlrpc_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/interactive_edit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/watch_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/view_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/ligand_checklist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/simple_zoom_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/validation_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cootbx/hydrogens_button.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_pdb_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_chemical_elements_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_adp_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_leapmotion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_ellipsoids_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/glu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/gl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_defines_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewers_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line/try_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_cube.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_fonts_ucs_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_scene.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/viewer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/gl_managed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/extract_opengl_specs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/quadrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_ellipsoids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_viewer_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/generate_functions_bpl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/wx_motion_on_tab.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/tst_fonts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_cout_compile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/split.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/fem_include_search_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/insert_write_at_start_of_each_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/command_line/show_calls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_cout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/simple_compilation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tst_equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/tokenization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/intrinsics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable/equivalence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_geometry_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_xray_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_ab_initio_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_detectors_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_r3_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fable_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_bulk_solvent_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_min_cut_max_flow_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_statistics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_xray_observations_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_format_image_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_rsr_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/cma_es_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es/tst_cma_es.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_fp_fdp_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_icsd_radii_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_shared_types_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/view_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/view_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklview/comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/hklview.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/visualize_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/make_install_HKLviewer_ChimeraX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/compare_datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/multiplicity_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/qttbx.view_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/model_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/command_line/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/programs/HKLinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/map_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/qttbx/xray_structure_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_websocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tests_HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/regression/tst_hklinfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklviewer_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtricorder_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/display2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/HKLviewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/chimeraX_wheel_src/tool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/webbrowser_messenger_py3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/xtriage_runner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/hklview_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/jsview_3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/qt_chromium_check.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/cmdlineframes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/crys3d/hklviewer/default_user_preset_buttons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_symmetry_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_validation_ramachandran_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_cif_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_vector_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_bandpass_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_breadth_first_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_henke_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_multipolar_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_shelx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_translation_search_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_geometry_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_covalent_radii_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_py_from_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/exercise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_18_doc_programming_tips_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_8_doc_maps_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_15_doc_models_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_17_script_rfactors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_2_doc_hlo_intro.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_3_doc_hlo_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_12_script_compare_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_7_doc_low_flex_advanced.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_1_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_19_doc_programming_tips_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_10_doc_programming_tips_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_11_script_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_5_doc_hlo_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_9_doc_maps_boxing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_13_script_ideal_ss.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_website/regression/tst_4_doc_hlo_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_asymmetric_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_adaptbx/exercise_compression.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_iso_surface_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_stl_set_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_pdb_hierarchy_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_sgtbx_asu_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_graphics_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_scalepack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_building_loop_closure_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_adptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_wildcard_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_anharmonic_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_den_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_array_family_shared_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_stl_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_rational_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_suffixtree_shared_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_french_wilson_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_sphere_surface_sampling_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_clustering_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lbfgsb_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_primitive_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/rational.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/tuple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/boost/std_pair.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/divide_by_zero.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_platform_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/inexact.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/lcm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/double_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/segmentation_fault.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/command_line/int_overflow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/hybrid_times.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/minimum_cut_enumerate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/graph_structure_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/breadth_first_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/metric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/connected_component_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/clustering_algorithm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/min_cut_max_flow.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/graph/maximum_clique.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_hydrogens_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_tuple_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_array_family_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_clash_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_minpack_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_glmtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_least_squares_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_indexing_api_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_connected_component_algorithm_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/all_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/rotamer_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/sample_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/idealized_aa_residues/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/find_ss_from_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_ss_id_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/build/tst_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_segid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/secondary_structure_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/proteins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/tst_insertion_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/secondary_structure/nucleic_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/kbu_refinery.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_flat_nonuniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_aniso_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/tst_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/f_model_all_scales.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/bulk_solvent/scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/tst_hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/data_filtering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/nci/skew_kurt_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/neutron_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_minimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_9.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/riding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_validate_H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/find.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/specialised_hydrogen_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/parameterization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/build_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_parameterization_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/reduce_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_fd_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_riding_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/hydrogens/tst_add_hydrogen_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/tst_standard_geometry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/wwpdb/rcsb_web_services.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/identify.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/dump_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/svm/tst_classifier_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_ca_svm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_symmetry_axis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/halides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_validate_mg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_environment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ions/tst_pick_approx_zn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/rotatable_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/tst_switch_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/grid2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/ntc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/utils/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/masks/tst_asu_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/max_like_non_uniform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/maxlik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/max_lik/tst_max_lik.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/print_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_real_space_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/adp_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/minimization_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/flip_peptide_side_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/orca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/weights_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/ensemble_probability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/ensemble_refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/anomalous_scatterer_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/individual_sites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/rigid_body.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/explode_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_small_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_weight.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residues_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/fit_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_individual_sites_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/real_space/tst_fit_residue_1H.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/calculators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/inspect_tardy_trajectory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/energy_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/targets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_fit_rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_refinement_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tst_occupancy_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/wx_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/refinement/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/proq2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/nrubs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/kinemage/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/ensemble_ordered_solvent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/solvent/map_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdb_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/find_peaks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/development_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/distance_difference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_peaks_holes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fetch_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/reciprocal_space_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/grow_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/secondary_structure_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_model_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/super.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_residue_in_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/kinemage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/search_pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cif_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validate_H_cl_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/r_factor_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_cablam_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam_training.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/find_tls_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/map_to_model_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/models_as_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/estimate_bijvoet_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/f000.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fake_f_obs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rebuild_rotarama_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/verify_mon_lib_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/real_space_diff_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mon_lib_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/maximum_entropy_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/model_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fab_elbow_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/perigee.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/development.aev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/emringer_score.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/select_best_starting_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/sisa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/apply_ncs_to_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/command_line/show_r_factors_by_shell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename_old.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/reduce2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/hydrogenate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate_suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/hbond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/water_b_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ribbons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/probe2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/ss_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/arginine_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/prepare_pdb_deposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/programs/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias/tst_ias.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ias/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rsr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/topology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/clash.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/altloc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/sphere_surface_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/shared_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry/asa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/f_model_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/convert_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/comparama.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/datasets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/comprehensive_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cbd_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/barbed_wire_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/percentile_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/probescore_ligand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/kinemage_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/table_from_json.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/molprobity/percentile_mpscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_others_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/clashscore2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rama_z.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ensembles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rna_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_find_region_max_value.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cbetadev_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_arguments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_symmetry_SS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_chiral_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_cablam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_geo_endtoend.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rama_z_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/run_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_do_flips_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_rotalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_omegalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_waters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_undowser2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_keep_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_molprobity_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_model_properties.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/regression/tst_clashscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mean_devs_PRO_phi_psi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/analyze_peptides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/mp_validate_bonds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/ramachandran/convert_from_text.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/validation/fav_lists.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/xmanip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model_vs_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/real_space/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/make_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/tst_extend_sidechains_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/cablam_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/extend_sidechains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/ligands/lifi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/berkeley_ramalyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/custom_gm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/ccd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_closure/starting_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/building/loop_idealization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/check_cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/bond_angle_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/investigate_rotamer_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hpdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/pH_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/LinkedResidues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mutli_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/metal_coordination_library.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/mcl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_svl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/testing_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/hydrogen_bonding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/omega_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_base_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/sf4_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/altloc_weighting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/histidines.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/cdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rdl_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_pH_mechanism.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_mcl_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/density_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_hpdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_rdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_cdl_esd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/rotamers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/conformation_dependent_library/tst_omega_cdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/diangle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/dualparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitealyze.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/transdent.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suitenamedefs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/mainchain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suites.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/suitename/suiteninput.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/thorough_outlier_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/matthews.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_massage_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage_twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/sigmaa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/make_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/pair_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/ta_alpha_beta_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/fa_estimation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/data_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/remove_outliers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/random_omit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_rejection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/twin_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_sigmaa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/massage_twin_detwin_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/outlier_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/tst_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/basic_analyses.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/relative_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/pre_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/bayesian_estimator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/mean_f_rms_f.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absence_likelihood.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/twmad_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/scaling/absolute_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_electron_scripting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_basics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/chemistry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/xtal_screens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/tst_ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/rdkit_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/ready_set_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/hierarchy_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ligands/electrons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/mtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/kick.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/fobs_minus_fobs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/maps/tst_composite_omit_map_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/plot_weights.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/den/refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/xmanip_tasks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/cif_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/chemical_components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/alignment/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/polygon/tst_polygon_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst_analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/backbone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/disorder/analyze_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_mixins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_setup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_metal_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_deuterium_terminii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_neutron_distance.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_chiral_values.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_protein_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_all_cif_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conv_v2_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/correct_hydrogen_geometries.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_dna_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_chg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_iron_sulfur_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_coordination.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_glyco_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/idealized_aa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/hydrogen_restrictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_paral_geo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rotamer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/cif_triage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/linking_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/bondlength_defaults.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/glyco_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/conformation_dependent_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_superpose_ideal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/populate_auto_linking_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_correct_hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/tst_carbo_linking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/monomer_library/pdb_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/resolve_resources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/atomic_environment_vectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_sa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/tst_cartesian_dynamics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/ensemble_cd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/dynamics/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/ladp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm12.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm15.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/perm14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/tls/decompose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/twin_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/twinning/probabalistic_detwinning.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/invariant_domain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/n_dim_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/tst_rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/nqh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/graphics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/ramachandran_eval_deprecated.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/rotamer_eval.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/rotamer/sidechain_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geo_min_restraints_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mtz2map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sort_hetatms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mmtbx_refinement_wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_alignment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_angle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_fd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_no_cryst1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_arrows_on_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_models_to_from_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ml_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_metal_link_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_type_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_process_predicted_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validation_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_special_term_at_end.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_scattering_type_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_apply_cif_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rigid_bond_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_remediate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_refine_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_reduce.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_flipping_his.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_altloc_chain_break.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_probe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_add_h_to_water.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_loop_closure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_sequence_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_vs_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_maps_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_origin_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_schrodinger_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_ccs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_chain_comparison_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_clashes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_minimize_chain_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_pdbtools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/make_fake_anomalous_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_statistics_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_prune_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_remove_alternative_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_dedeuterate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_neutralize_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_utils_merge_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_mtrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_biomt_mtrix_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_tors_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_get_vdw_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/model/tst_model_cart_ref_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_holton_geometry_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_regularize_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_command_line_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_as_xyz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_tls_refinement_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tls/tst_get_t_scheme.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_psi_phi_extraction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_model_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_anomalous_substructure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_isomorphous_difference_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_rank_scale_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_msa.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_geometry_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_domains_from_pae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_dynamics_cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_map_model_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cif_as_mtz_wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_fmodel_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_multi_residue_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cc_star.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_validate_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_real_space_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/ncs/tst_ncs_search_flips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_ligand_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_cis_trans_peptide_link.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_polder_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/regression/tst_find_ss_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/tst_mmtbx_probe_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/AtomTypes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/Helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/base_qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qm_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/orca_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/qi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/mopac_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_c_beta_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_reference_coordinate2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/external.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/c_beta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/tst_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/afitt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/ramachandran.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/geometry_restraints/quantum_restraints_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_optimize.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_ga.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/mod_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/optimize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/sisa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_00.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_02.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_04.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/pair_interaction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_05.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pair_interaction/tst_01.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/cartesian_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ligands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_restraints_group_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/tncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ncs/ncs_params.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/density_modification/tst_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/Movers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/tst_mmtbx_reduce_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/Optimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/reduce/InteractionGraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/tst_em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_scoring.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rolling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx/ringer/em_rscc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cma_es_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/fit_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/test_3_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/vonHamos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal/jf4m_geom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/pal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/write_composite_image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_from_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/agipd_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/euxfel/read_geom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/jf16m_cxigeom2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/sync_jf16m_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/swissfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/cctbx_xfel_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/dials_file_matcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/reflection_length.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/image_pickle_locator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/kapton_2019_correction_frame_frame_plugin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/split_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/util/dials_pickle_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/fee_calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_optical2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/ensemble_refine_pipeline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/print_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_display_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/stills_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/frame_unpickler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/show_spot_separation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/smooth_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_congruence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/calc_gain_ratio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_xmerge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pbs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cspad_pinwheel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/get_next_trial_id.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/striping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pickle2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_psana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/runs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/convert_gain_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cctbx_integration_pickle_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/trumpet_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_mpi_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/launch_fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/fee_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/auto_submit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_cbfheader2slaccalib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/jungfrau_metrics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_json_to_cbf_def.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_trials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_apply_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/frame_extractor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cbf_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_stream_to_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/find_highres_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/view_pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_mar_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_pyana.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/monitor_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/weather.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/h5_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/list_db_metadata.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_cbf_metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/jobs_sentinel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/upload_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/quadrants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/plot_to_subpixel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/FEE_average_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/riso.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/make_dials_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/overlay_spectra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/trial_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xtc_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/experiment_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/subtract_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/beamcenter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/or_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/detector_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_detector_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xfel_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/mpi_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/drift.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_slaccalib2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/recompute_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cspad_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_detector_format_versions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_plotcv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_calibdir2cbfheader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/filter_experiments_by_rmsd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_generate_circular_gain_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/xpp_progress_bar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/command_line/cxi_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/metrology2phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cftbx/detector/cspad_cbf_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/parameter_optimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/multiproc_temp_parame_opt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/graph_proc/components.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/psana_cctbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/lcls_api/exercise_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_bg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/fxs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_hit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/mpi_fxs_c2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/pnccd_ana/pnccd_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/amo/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/max_like_pos_neg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/mono_treatment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_intensity_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_42.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_visualise_orientations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/command_line/cluster_per_frame_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/simulate_partial_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/singleframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/clustering/cluster_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_isoform_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/print_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats_from_experiments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_run_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/xfel_gui_launch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_uc_cloud.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/ui_server.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/plot_reflection_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/command_line/get_hit_timestamps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/dxtbx_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/rungroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/frame_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/job.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/task.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/merging_log_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/xfel_db.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/tag.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/cfgs/shifter_templates.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/db/stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/run_stats_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/ebeam_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/tooltips.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_scraper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/submission_tracker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/spotfinder_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/timeit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/components/xfel_gui_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/ui/phil_patch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark0.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/quadrant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/flatfile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/panel_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/legacy_scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/metrology/mark3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/small_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/powder_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/candidate_cells.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/powder_from_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/xfel_small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/small_cell_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/command_line/cake_plot_prep.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/write_orientation_arrows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/small_cell/solve_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/data_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cxi_cc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/strong_zulu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/completeness_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/integrate_image_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/einsle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/pixel_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hdf5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/rayonix_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_image_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_code.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_xes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/histogram_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/hitfinder_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_faster_histograms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/display_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/cspad_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_event_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_param.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/average_tbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_hitfind.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/parse_calib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_daq_status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/xes_finalise.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_illumination_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_ledge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/common_mode.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_dump_bitmap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_spectrum_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/cspad_ana/mod_pulnix_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/display_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/Cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/test_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/clustering/SingleFrame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/average_spots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/trumpet_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/merging_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_updated_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_hybrid_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/spectra_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/postrefinement_legacy_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/display_powder_arcs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/wx_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/trials_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/cxi/gfx/status_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_reference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/token_passing_left_right.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/df_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/polarization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/compare_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/aux_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym_tranch_align.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_to_abc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/modify/reindex_cosym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_load_calculator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_loader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/input/file_lister.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/integrate/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_helper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/data_counter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/utils/memory_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/preference.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/preference/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/tdata/cell_listing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/application.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/validation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/group_reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/group/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/experiment_scaler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/scale/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/worker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/deltaccint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/unit_cell_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/beam_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/intensity_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/statistics/experiment_resolution_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/crystal_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/model/resolution_binner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/monitor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/lunus/lunus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/load_balancer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/balance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/reflection_table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/postrefine/postrefinement_rs2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/merger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/merge/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_sr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ha14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_mm24.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/errors/error_modifier_ev11.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/global_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/reflection_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/filter/experiment_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output/factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/application/output/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/phil_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/command_line/mpi_integrate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/absorption.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/general_fcalc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/predictions_to_edges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/error_modeler_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/errors_from_residuals.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/reduced_chi_squared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_propagate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/error_model/sdfac_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/statistics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/algorithms/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_sqlite3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/database/merging_database_fs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/tables/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/report/graphs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/merging/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/progress_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/simulate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/split_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/xfel/xpp/progress_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ncs_cartesian_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_python_streambuf_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_dmtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/sparse/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix/row_echelon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/matrix/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/r3_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/set.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/vector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stl/tst_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/golden_section_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/minpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_func_free_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_curvatures.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lbfgs/tst_mpi_split_evaluator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graphics_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/differential_evolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/iso_surface/tst_iso_surface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/cross_entropy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/tst_normal_equations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/tests/test_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns_solving.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/lstbx/normal_eqns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/glmtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/genetic_algorithm_with_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/random/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/breakpoint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/cubic_spline.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/incremental_SO3_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/sphere_sphere_intersection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_similarity_indices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_peak.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_error_propagation_matrix_inverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_dmatrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_weighted_correlation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_tetrahedron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_bessel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_cubic_equation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_resample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_quadrature.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_orthonormal_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_angle_derivative.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gcd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_line_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_exp_functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_g_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_uniform_rotation_matrix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_r3_rotation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tests/tst_halton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/boost_python/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/besselk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/lefebvre.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_multivariate_moments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/curve_fitting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/multiple_superposition.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/des_3_240_21.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/zernike_align_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/des_3_100_13.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_2d_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/spe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/chebyshev_lsq_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/minimum_covering_ellipsoid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gumbel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_bessel_zeros.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_undirected_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/euler_angles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/distributions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_400.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/sieve_of_eratosthenes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/farey.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/scale_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fliege_mayer_900_ylm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/periodogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/so3_lie_algebra.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/fit_quadratic_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/math/tst_zernike_mom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/test_cases_tardy_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/rigidity_matrix_symbolic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_rigidity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tst_tardy_tree_find_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/graph/tardy_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/direct_search_simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion_hard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_spherical_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_free_motion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_simulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/free_motion_reference_impl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/wx_molecules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/test_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/proto/tst_singular.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/joint_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/wx_tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/featherstone.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_energy_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/body_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tst_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/spatial_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/make_bundles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/rigid_body/essence/tardy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/simplex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/stdlib/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/shared.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_recipe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/chebyshev_lsq_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/minimizer_comparisons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/functions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/flex_array_loops.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/integrating_a_weighted_sinc_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/principal_axes_of_inertia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/immoptibox_ports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/silver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/bevington/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/rigid_body_refinement_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/lbfgs_linear_least_squares_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/examples/flex_grid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/svd.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/householder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/linalg/eigensystem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/robust_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/signal_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/dicts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_robust.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/tst_random_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/graph_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/python_utils/random_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/wigner/tst_wigner3j.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree/single.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/suffixtree/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/fftpack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/lbfgs_fem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_traits_builtin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_operator_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_algebras.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_std_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_apply.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/operator_functor_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/source_generators/array_family/generate_reductions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/regular_grid_on_unit_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/reparams.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/refinebase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/optional.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/auxiliary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/bounds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/minimizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/min_logging.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/compulsory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/twisted_gaussian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/dtmin/realsymmetricpseudoinverse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/cubicle_neighbors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx/smoothing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_crystal_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_indexing_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_dtrek_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/copy_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/ccp4io_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/console_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_state.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/simplexml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/clusterTests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/metric_prefixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/subprocess_with_fixes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_base_packages.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/write_gui_dispatcher_include.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/rpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/installer_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/package_defs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/setup_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/plus_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/make_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/regenerate_module_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_windows_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/auto_build/create_mac_pkg.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/find_reference_cycles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/fastentrypoints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_representation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_server_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cli.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/callbacks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/thread_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/try_hello_world_c.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/complex_math.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/smart_open.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/install_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_runtime_sources.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/install_csh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/bundle/copy_build_libtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_variable_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_qstat_counts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_under_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/seconds_since_the_epoch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_source_files_sorted_by_size.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/nequal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/start_binary_bundle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/bundle_as_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/env_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_untested.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_but_no_repr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_in_repositories.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/start_process.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_unzipsfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/install.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_ends_with.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_pythonpath.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/prime_factors_of.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_full_command_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_repository_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_not_show_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/extract_code_from_txt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/path_utility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_module_dependencies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_modules.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_include_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_dist_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numeric_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/dtrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sphinx_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_host_and_user.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/import_all_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_commands.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/sge_available_slots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_windows_exe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/resource_monitor_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/clean_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/raise_exception_for_testing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_mac_app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_cctbx_bundle_for_installer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/bootstrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_lib_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/add_from_future_import_division.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/any2unix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_install_script_bat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_line_count.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/printenv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/install_conda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_environ_usage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_reserved_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_python_sys_executable.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/parallel_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/git_avoid_merges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/easy_qsub.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_old_style_classes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remote_processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/analyse_code_comments.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/assert_stdin_contains_strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/list_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/remove_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/run_tests_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/ipython_shell_start.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/make_sphinx_html.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/epydoc_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_all_on_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/scons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_build_options.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/make_dist.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/py_compile_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/create_selfx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_bin_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_date_and_time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_number_of_processors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/chunk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/show_numpy_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/check_libcpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/run_pickled_function.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/wait_for_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/command_line/find_pdb_mmcif_problems.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pyframe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/start_print_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/clear_paths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_object_oriented_patterns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_containers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/resource_monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/forward_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/introspection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/load_env.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_mp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_template.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/command_line.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_interface.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_tokenizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/tst_experimental.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/phil/gui_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_mahalanobis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/subversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/math_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/env_config.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/python_code_parsing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/wingide.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/mp_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/stacktrace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/job_scheduler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/file_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/mainthread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/process_pool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/thread_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/parallel_for.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/shared_resource.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/cluster_handler.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/philgen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/scheduling/socket_queue.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_find_unused_imports.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_dlite.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/status.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/transfer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/submission.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/polling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/processing/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/lsf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/looping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/sge_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/communication.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/remote.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/pbs_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/generic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/queuing_system_utils/scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/cpp_function_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/SocketServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileSocket.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/StartServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileServer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/server/FileClient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/mpi4py.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/configure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pyplot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/table_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/assert_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/crossmingw.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/easy_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_binary_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/xmlrpc_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/except_Exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/xcode_build_phase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/development/timers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/pkg_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/file_clutter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/objgraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/progress.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_str_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_topological_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/code_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_fully_buffered_timeout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/python_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/sphinx/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/test_utils/pytest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/log.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_runtime_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/result.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/program_utils/statistics_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_easy_mp_multicore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/libtbx/tst_scheduling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_maptbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_quadrics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_rigid_body_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_sgtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_xray_scattering_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_masking_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/sample.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/self_match.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/annlib_adaptbx/source_generators/generate_all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_sparse_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/icons.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/reports/pdb_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/process_control.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/qstat_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/mtz_dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/windows.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/listeditor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/metallicbutton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/symmetry_dialog.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/ensemble_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/app.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/monitor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/xtriage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/plan_sad_experiment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/anomalous_differences_histogram.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/loggraph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/inspect_r_free_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/wxpython.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/show_file_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/command_line/plot_anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/heavy_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/molprobity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/plots/emringer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/sequence_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/layout.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/custom_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/b_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/path_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/bitmaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/adp_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/wx4_compatibility.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/polygon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/pdb_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floatctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/ints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tribool.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/floats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice_multi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/boolctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/space_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/path.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/simple_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/text_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/array_label.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/intctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/numbers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/unit_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/tree.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/symop.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/strings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/phil_controls/misc_ctrls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/checklistctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/browser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/info_panels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/segmentedctrl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/polygon_db_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/anomalous_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/wxtbx/misc_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/cufft/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering/tst_direct_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/tst_spherical_bessel_jn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cudatbx/math/special_functions/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCDBG.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN928.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/image.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN445.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5ESRFJungfrau4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerChessID7B2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVTimePix_SU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxED.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaMPCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Sacla.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVJHSim.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/nxmx_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN920.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCNoDateStamp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTileHierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISII.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMV.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauExt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMRC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFull.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVNOIR.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI51.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/Format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusJungfrauHack.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN926.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN905.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMarIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatISISSXD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerPhoton.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/nexus_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/image_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/boost_python/cbf_read_buffer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/README.md -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16MI03.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixXPP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS12M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniADSCHF4M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/image.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS16M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMANDI.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/Registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCCspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSC.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCMultipleDetectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5Lambda.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXDS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI61.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI41.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatGatanDM4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI71.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/cbf_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullByteOffset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPilatusHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPetraP14.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigaku.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerQuadroED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCJungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMultiTile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI32.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatMultiImageLazy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI7d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPY.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSER.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerED1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5SaclaRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLSI19_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVCMOS1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexusTimepix2M.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusXXX.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFBruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFHelpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecifiedStill.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYunspecified.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNoniusKappaCCD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCEpix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMini.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXIS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnNoTS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSNAPSID19.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatBrukerFixedChi.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN457.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatXTCRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatDIP2030b.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatPYmultitile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatHDF5PAL.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuEiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixESRF.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN915.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatEDFALS733.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatRAXISIVSpring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonixSPring8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVADSCSN442.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatSMVRigakuSaturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/TemplatePYCXI31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatTIFFRayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatROD.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/format/FormatNXmxDLS.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/load.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/filename.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/serialize/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_nexus_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/util/rotate_and_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/boost_python/ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/SmarGonShadowMask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/goniometer_shadow_masking.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/masking/SConscript -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/datablock.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/nexus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/ext.cpp -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/flumpy.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/compression.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/boost_python/imageset_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/detectors.lib -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/CMakeLists.txt -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/sequence_filenames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/debug_memory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/radial_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/install_format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_header.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/read_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/any2nexus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/dlsnxs2cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/overload.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/depends_on.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/saturation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/image_average.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_mask_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/display_parallax_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/print_matching_images.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/show_matching_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/plot_detector_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/image2pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/command_line/detector_superpose.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example/resolution_corners.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/example/to_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_format_image_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_flumpy.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/py.typed -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/filecache_controller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/filecache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_model_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_imageset_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/beam.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/kappa_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/profile.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment_list.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/multi_axis_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/panel.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/to_from_dict.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/kappa_goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/detector.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/model_ext.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/experiment.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/parallax_correction.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/crystal.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pixel_to_millimeter.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan_helpers.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/pickle_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/goniometer.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/beam.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/spectrum.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/boost_python/scan.cc -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/boost_python copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/multi_axis_goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/panel_data.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/parallax_correction.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/goniometer.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/spectrum.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/pixel_to_millimeter.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/model_helpers.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/tof_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/virtual_panel.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector_helpers_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/detector.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/compare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/ray_intersection.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/model/experiment_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/ref_pickle_double_buffered.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table_suite.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/array_family/flex_table.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/imageset.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/imageset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/dxtbx_masking_ext.pyi -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/flumpy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx/error.h -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_random_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ramachandran_restraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_math_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_util_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_mtz_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_array_family_flex_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_ccp4_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_wigner_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/ring_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_viewer_image_factory.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/tile_generation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/score_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/example_frame_plugin_hidden.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/pyslip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/uc_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/slip_viewer/slip_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/spot_markup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/dual_resolution_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/slip_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/dials_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/simple_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/stills_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/sgtbx_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/subgroup.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/g_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/symmetry/constraints/parameter_reduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/refine_uc_cr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/run_labelit_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/run_spotfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/integrate_crude.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simage/create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/dataset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/pixels3d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/indexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_wrap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/integration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/results_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/spotfinder_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/calibration_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/drivers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/processing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/viewer/controls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass/simulated_annealing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bandpass/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.explore_completeness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.wx_display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/slip_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.solver.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/simage.create.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/example_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/command_line/viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/detectors/silicon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dials_core/integration_core.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_helpers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/tst_coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/coordinate_frame_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/cftbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/tst_xfel1_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/constants.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/simulation/sim_pdf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/force_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_procedure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/outlier_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/nearest_neighbor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/lattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/test_dps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing_api/tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/phil_preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/scope.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/phil/preferences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/stats_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/pixel_spread.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/oscillation_shots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/spot_shape.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/new_horizons/speckfinder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/basis_choice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/lepage.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/cell_assessment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/constrainment.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/zuoreduction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/dps_core/tst_iotbx_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/tst_sublattice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/sublattice_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_auto_monoscan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/tst_dataset1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/indexing/do_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions_idx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/ersatz_misset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/instrument_specifics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/tst_detector_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/detector_model/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2a.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2_positions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/compare_mosflm_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/bpcx/uc1_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_predict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_bragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/fastbragg/tst_utils_clustering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_ewald_sphere.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/diffraction/tst_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/outlier_spots/fit_distribution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lbfgs_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_dssp_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_ncs_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_covariance_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_secondary_structure_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_wavelengths_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fast_linalg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_suffixtree_single_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_python_meta_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_diffraction_fastbragg_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_miller_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_graph_structure_comparison_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_viewer_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_shoeboxes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_gpu_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/gpu/tst_exafel_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/stage_two_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/attr_list.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/stage_two_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/crystal_systems/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/refiners/base_refiner.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/mpi_logger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/parameter_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/ensemble_refine_launcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/psf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/hopper_ensemble_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/device.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/diffBragg/prep_stage2_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_pilatus.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/sim_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_multipanel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_mosaic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gauss_argchk.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_basic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_multisource_background.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_beam.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_nanoBragg_minimal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_init.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_anisotropic_mosaicity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/nanoBragg_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/nanoBragg/tst_gaussian_mosaicity2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/kokkos/tst_kokkos_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/FormatHDF5AttributeGeometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/forward_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/modeling/predictions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/simtbx/pixel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_decompose_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_maximum_clique_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/energy_scan_notch_finder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/construct_frame.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/time.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/max_like.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/mono_simulation/util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/rayonix.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/cspad.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/metrology.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/legacy_metrology/cspad_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/xtc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/serialtbx/detector/jungfrau.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_format_nexus_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_integration_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_hough_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_probe_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_detectors_bruker_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_geometry_asa_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_lstbx_normal_equations_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_gl_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_glu_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/qttbx/viewers/chimerax.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_miller_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/crystal_symmetry_from_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_extract_from_symmetry_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtz/tst_dano.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/fpfm_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/solve/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pymol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/reflnlist_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/crystal_symmetry_from_ref.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dtrek/dtrek_symmetry_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif_mtz_data_labels.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/tables.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/PrettyPrint/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/format.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/cod_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/crystal_symmetry_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/citations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cif/restraint_file_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_miller_arrays.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_get_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/patterson_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/xplor.map.show_summary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/effective_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_atoms_by_name.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.insert_scale_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz.dump.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.superpose_centers_of_mass.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.dump_as_python.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_completion_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/poscar_as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/csv_as_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/dano_as_amplitudes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.join_fragment_files.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/detector_image_as_png.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif_as_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/shelx.as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/mtrix_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.print_sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/explore_metric_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cbf_read.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_as_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.b_factor_stats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/r_free_flags_accumulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cif.validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/biomt_reconstruction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/dtrek.to_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/blast_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.transfer_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_diff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_show_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/get_pubmed_citation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/flip_symmetric_amino_acids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_labels_comparison.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/show_distances.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/build_phil_cache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/pdb.as_xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/command_line/cns.sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/programs/unique_with_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ncbi_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/xmlbuild.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/homologues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/ebi_wu_blast_xml.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/alignment_as_hsearch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pubmed.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/pdb_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/bioinformatics/local_blast.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/bruker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/saturn.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/hamamatsu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_cbf_comp_read_meth.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis_nonsquare.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_debug_write.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/dtrek.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/util/filters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/generic_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/marIP.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_py_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/detectorbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/macscience.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/test_raxis2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/active_area_filter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/eiger_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/raxisbase.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/test_mar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_minicbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/tst_detectors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/pilatus_slice.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/camera_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/config_detector.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/spot_xy_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/context/endstation_max_iv_trial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/edf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/url_support.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/noir.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/adsc_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/beam_center_convention.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/npy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/cspad_detector_formats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/detectors/image_from_http_request.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/tst_xplormap.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xplor/crystal_symmetry_from_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/space_group_dictionary.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/no_merge_original_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/tst_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/scalepack/merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_converter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/write_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/fullprof/read_pcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/tst_strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/strudat.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/kriber/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/crystal_symmetry_from_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tokens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_lex_parse_build.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/fvar_encoding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/fcf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/parsers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/lexer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/hklf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/tst_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/shelx/write_ins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/builders.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xds_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/read_ascii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/spot_xds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/crystal_symmetry_from_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xparm.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/xds_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/gain_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/blank_cbf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/integrate_hkl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/xds/correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ranges.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/logfiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_sdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/pdb_remarks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/space_group_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/reflection_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/tst_cns.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/index_fobs_sigma_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_writer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/sdb_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/cns/crystal_symmetry_from_inp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/dsn6/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6 copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/table_one.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/reflections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/import_data_and_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/gui_tools/cif_conversions.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/builders_depending_on_smtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_id_str.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_xray_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_simple_map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_generate_n_char_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_show_systematic_absences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_cif_inputs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_data_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager_wrapping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_copy_select.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_occupancies_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_altlocs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_selected_hierarchy_flip.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_bioinformatics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_poscar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_call_consistency.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_multimodel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_local_resolution_10.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_all_chain_ids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_group_rounding.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_add_conformations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_export_scalepack_unmerged.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_resname_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_external_sharpening_7.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_merging_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_wildcard.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_sort_atoms.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_atom_selections_10k.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_as_fasta.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_box_around_molecule.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_tls_from_map_8.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phases.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_long_chain_ids_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_csv_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_split_models.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_as_pdb_1atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdb_link_records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cli_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_to_from_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mtz_as_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_pdb_v3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_crystal_symmetry_from_any.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_patterson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_extract_xtal_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_model_sharpening_5.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_cif_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_miller_sort_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mmcif_segids.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_user_selections.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_reordered_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_ligs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_search_broken_chain.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_ncs_without_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_data_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_restraints_merge.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_mrc_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/direct_methods_light.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdbx_mmcif_tutorial.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/libtbx_phil_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_to_map_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_convert_free_to_work.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_shake.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/tst_mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/prepare_model_for_rsr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/mtz_free_flipper.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_split_chains.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_tardy_conf_sampling_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/recalculate_phenix_refine_r_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/examples/pdb_symmetry_copies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/file_reader.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/download.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/amino_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_atom_sort.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/fetch.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_selection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/pdbe.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_selection_string.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_rna_dna_atom_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_aa_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/experiment_type.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/pdb_v3_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/crystal_symmetry_from_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remediation/tst_remediator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_read_mtrix_records_from_cif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/nucleic_acid_codes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/atom_name_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/misc_records_output.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/forward_compatible_pdb_cif_conversion.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/records.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/modified_rna_dna_names.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_tls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/cryst1_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/aa_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_290_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/xray_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/mmcif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_3_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/web_service_api.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_mmcif_hierarchy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/tst_secondary_structure_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/remark_2_interpretation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/rcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/rna_dna_detection.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/pdb/hybrid_36.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/mtrix_biomt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/simple_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/common.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/real_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/restraint.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/miller_array.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/map_coefficients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/ncs_spec.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/data_manager/sequence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/ncs/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/reflection_file_editor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx/map_manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_uctbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_utility_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_max_lik_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_xplor_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster/mod_isoform_cluster.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/isoform_cluster/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/explore_twin_operators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/plot_energy_spectrum.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/compare_solution_pickles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/mpi_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/r_mtz_mtz.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/frame_extractor_by_scan.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/iotacc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/comparestats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/print_integration_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/view_fineslices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/solve_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/change_path_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/plotstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/cluster_isoform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/viewstats.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/spot_param_visualizer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/ray_trace.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/prime_gui.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/command_line/mpi_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_indexing_ambiguity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/index_ambiguity/mod_kmeans.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_frames.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_perf.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/postrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_util.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_threads.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_merge_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs_partiality.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_plotter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_run.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_gui_dialogs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_leastsqr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_mx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/prime/postrefine/mod_outlier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_linalg_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_refinement_constraints_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/iotbx_dsn6_map_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx/tst.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/omptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/multipolar.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/pdb_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tst_bfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tardy_adaptor.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/tst_dev.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/eval_iso_vs_refined.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cif_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/omz/cod_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/dmtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/plane_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/bravais_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/short_cuts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/proto/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/facet_analysis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/check_redundancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/direct_space_asu/cut_plane.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/rational_matrices_point_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_pg_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sub_lattice_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/sys_abs_equiv.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/symbol_confidence.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/literal_description.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/sgtbx/pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/tst_super_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/reindex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/burzlaff_zimmermann_dewolff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal/coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/tst_reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/display.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/reindexing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/miller/tst_map_to_asu_isym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/run_examples.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/chemical_elements.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/sasaki.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/read_custom_scattering_dict.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/attenuation_coefficient.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/e_scattering.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/distance_based_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/gaussian_fit.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/tiny_pse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/formula.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/neutron.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/van_der_waals_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/wavelengths.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_cross_validation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/hydrogen_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/format_gaussian_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/combine_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_approx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_fits.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_kissel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/itvc_section61_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/e_scattering_plots.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/rez_rez_grant.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/development/kissel_io.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/xray_scattering/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/icsd_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/covalent_radii.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/eltbx/henke.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/cod_select_and_pickle.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/precession_view.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/version.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/structure_factor_timings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/find_reticular_twin_laws.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/form_factor_query.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/samosa_scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/cctbx_test_nightly.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/space_group_info.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/eltbx.show_fp_fdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/command_line/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/map_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_sharpening.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_curves.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/segment_and_split_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/auto_sharpen.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_peak_volume_estimate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_real_space_refinement_simple.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_interpolation_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/refine_scales_errors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_map_peak_3d_as_2d.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_loft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_get_percentile_cutoffs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/qscore.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_ccp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_asymmetric_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/tst_target_and_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/bcr.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/bcr/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/maptbx/resolution_from_map_and_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors_pdb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/wyckoff.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_hand.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/guide_to_notation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/web_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jvx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/asu_gallery/jv_index.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/multiple_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/cgi_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/explore_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/replay.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/libtbx_help.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/dispatcher.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/io_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/frac_cart.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/iotbx_cif_validate.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/change_setting.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/web/browse_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adp_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/anharmonic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/euclidean_model_matching.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/scatterer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observation_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_shelxl_wght_ls.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/targets/tst_r1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/misc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradient_flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/from_scatterers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/global_counters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients_direct.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure_factors/gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations/tst_observations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/xray/observations/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/crystal_orientation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/macro_mol/rotation_parameters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/translation_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/covariance/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/krivy_gruber_1976.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/reduction_base.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/determine_unit_cell/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/uctbx/gruber_1973_table_1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/neutron/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_refine_xray_curvs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_harker.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fast_nv1995.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_is_periodic.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sphericity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_denominators.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_fast_gradients.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_data_manipulation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pointgroup_tools.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_lattice_symmetry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_merge_equivalents.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_find_best_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization_failure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sf_low_res_accuracy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grm_modifications.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sampled_model_density.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_mask.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_expand_to_p1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_web_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_double_step_filtration.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_minimization.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_f_model.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_box.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reflection_statistics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_amplitude_normalisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wavelength_units.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_math_module.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_show_cosets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_krivy_gruber.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_direct_scaling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_coordination_sequences.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_statistics_graphs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fcalc_fft_stability.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_french_wilson.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_diffuse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_connectivity_allsym.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_fourier_transform_real_part_at_x.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_pair_asu_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_geometry_restraints_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_close_packing.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_site_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_map_weights_for_symmetry_summation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_special_op_simplifier.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_maptbx_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_emma.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_twin_target.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_aniso_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_sgtbx_tidy_pickling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_prepare_map_for_docking.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_mem_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_reciprocal_space_asu.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_miller_lookup_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_adp_constraints_cartesian.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_loc_res.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_grouped_data.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_target_functors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_wilson_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_crystal_asu_clusters.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_triplet_generator.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_xray_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/regression/tst_change_basis.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/random_f_calc.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/quartz_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/site_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_calculus/u_star_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/lebedev_2005_perturbation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/find_sys_abs_equiv_space_groups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/reduced_cell_two_folds.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/getting_started.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/miller_transform.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_consistency_checks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/adp_symmetry_constraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/sub_group_graph.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_partial_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/neutron_structure_factors.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/structure_factor_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/random_puckers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/f_model_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/all_axes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/convert_ccp4_symop_lib.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/ccp4_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/change_hand_p31.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/trigonal_r_vs_tetragonal_i.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/le_page_1982_vs_lebedev_2005.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/space_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/hirshfeld_test.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/unit_cell_minimizers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/space_group_matrices.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/analyze_adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/find_distances_using_cpp_objects.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/list_non_principal_continuous_shifts.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/miller_common_sets.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/phase_o_phrenia.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/location_part.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/steve_collins.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_structure_factor_derivatives_2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/site_symmetry_table.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_cc_half.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_utilities.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/tst_permutations.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/show_results.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test_levenberg_sparse.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/data_subset.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/task4.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/sigma_correction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/per_lattice_postrefinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/scale.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/samosa/join.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/merging/test1.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/map_skewness.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/view_fft_map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/symops_530.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/fft_map_electron_density_around_atom.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/cr2o3_primitive_cell.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/tst_g_exp_i_alpha_derivatives.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/examples/maximum_subgroups.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging/brehm_diederichs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/merging/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/direct_or_fft.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/make_settings.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/space_group_option_parser.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/random_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/github.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/cns_density_modification.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/electron_density_sampling.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/debug_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/run_shelx76.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/make_cns_input.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/create_models_or_maps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/structure_factor_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/fmt_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/approx_amplitude_vs_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_epsilon.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/development/tst_cns_hl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/symmetry_search.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/adptbx.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_sasaki_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/eltbx/generate_henke_cpp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/base_geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/flags.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_proxy_registry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/nonbonded_overlaps.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/distance_least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/standard_cif_links.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/linking_class.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_motif.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/tst_angle_derivs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/manager.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/auto_linking_types.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/geometry_restraints/energies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx/r_free_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/regression_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/std_pair_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/wrappers.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_phil.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/cxi_run3.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/xfel/correction_vector_plot.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/stats_distl.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice2.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/method2_resolution.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/spotreporter.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/applications/heuristic_tbx/ice_nztt.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/close_spots_detail.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/core_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/sweep_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/image_viewer.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/find_active_area.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/signal_strength.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/command_line/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_client_push.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/multipart_encoder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/adsc_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_dials.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/specific_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache_bcsb.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/mp_spotfinder_server_is_alive.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/apache.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/bcsb_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/thin_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/pilatus_client.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/spotfinder_server_read_file.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/servers/general_client_example.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/practical_heuristics.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/dxtbx_toolbox/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/imagefiles.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/geometry.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/diffraction/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/array_family/flex.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/exception.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder/math_support/sphere_formulae.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_graph_metric_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_tiny_pse_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_dxtbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/spotfinder_distltbx_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_attenuation_coefficient_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_reduce_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/masks/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/adp_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/restraints/origin_fixing_restraints.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/weighting_schemes.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/least_squares.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_reparametrisation.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_disorder.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_direction.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_occupancies.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_constrained_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/tst_lbfgs.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_rigid.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/tests/test_same_group.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/all.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/hydrogens.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/geometrical/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/adp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/occupancy.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/fpfdp.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/refinement/constraints/site.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl/map.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/stl/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/utils.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/masks.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/anom_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/absolute_structure.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/command_line/benchmark_refinement.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_ab_initio_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/tests/tst_charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/charge_flipping.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/ab_initio/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/run_tests.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/absolute_structure/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/structure_factors/direct/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/array_family/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/test_data/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_refine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/regression/tst_commandline_anomrefine.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/conftest.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators/flex_fwd_h.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/source_generators/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx/development.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_dynamics_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_neutron_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_reference_coordinate_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_optional_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_utils_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_merging_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/tst_ext.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/__init__.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/fftw3tbx/libtbx_refresh.py -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_alignment_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/rstbx_bpcx_detector_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_python_hybrid_times_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_f_model_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_eltbx_sasaki_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/smtbx_structure_factors_direct_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_tls_optimise_amplitudes_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/boost_adaptbx_boost_thread_test_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_masks_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/gltbx_fonts_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_emma_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/determine_unit_cell_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_mosaic_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/mmtbx_rotamer_fit_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cbflib_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/cctbx_maptbx_bcr_bcr_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/scitbx_cubicle_neighbors_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages copying /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build/dxtbx_imageset_ext.so -> /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/xmlrpc_server.py to xmlrpc_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/interactive_edit.py to interactive_edit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/watch_file.py to watch_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/view_refinement.py to view_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/ligand_checklist.py to ligand_checklist.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/simple_zoom_list.py to simple_zoom_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/validation_lists.py to validation_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cootbx/hydrogens_button.py to hydrogens_button.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_leapmotion.py to wx_viewer_leapmotion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_ellipsoids_test.py to wx_ellipsoids_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/glu.py to glu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl.py to gl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_defines_bpl.py to generate_defines_bpl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewers_images.py to wx_viewers_images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/try_imports.py to try_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_viewer_utils.py to tst_viewer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_cube.py to wx_cube.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer.py to wx_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_fonts_ucs_cpp.py to generate_fonts_ucs_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_scene.py to wx_scene.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/fonts.py to fonts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/images.py to images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/viewer_utils.py to viewer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/gl_managed.py to gl_managed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/extract_opengl_specs.py to extract_opengl_specs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/quadrics.py to quadrics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_ellipsoids.py to tst_ellipsoids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_viewer_example.py to wx_viewer_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/generate_functions_bpl.py to generate_functions_bpl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/wx_motion_on_tab.py to wx_motion_on_tab.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/tst_fonts.py to tst_fonts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/gltbx/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout_compile.py to tst_cout_compile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/read.py to read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/cout.py to cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/read.py to read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/cout.py to cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/split.py to split.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/fem_include_search_paths.py to fem_include_search_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/insert_write_at_start_of_each_procedure.py to insert_write_at_start_of_each_procedure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/command_line/show_calls.py to show_calls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_cout.py to tst_cout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_read.py to tst_read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/simple_compilation.py to simple_compilation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tst_equivalence.py to tst_equivalence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/tokenization.py to tokenization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/intrinsics.py to intrinsics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fable/equivalence.py to equivalence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/cma_es_interface.py to cma_es_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cma_es/tst_cma_es.py to tst_cma_es.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_3d.py to view_3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/frames.py to frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/view_2d.py to view_2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklview/comparison.py to comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/hklview.py to hklview.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/visualize_r_factors.py to visualize_r_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/make_install_HKLviewer_ChimeraX.py to make_install_HKLviewer_ChimeraX.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/compare_datasets.py to compare_datasets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/multiplicity_viewer.py to multiplicity_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/qttbx.view_structure.py to qttbx.view_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/model_viewer.py to model_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/command_line/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/programs/HKLinfo.py to HKLinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/map_viewer.py to map_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/qttbx/xray_structure_viewer.py to xray_structure_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserSliceK-9.py to tst_HKLviewerOSbrowserSliceK-9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_websocket.py to tst_websocket.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerOSbrowserBinFSigF.py to tst_HKLviewerOSbrowserBinFSigF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiSliceK-9.py to tst_HKLviewerQtGuiSliceK-9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_HKLviewerQtGuiBinFSigF.py to tst_HKLviewerQtGuiBinFSigF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tests_HKLviewer.py to tests_HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/regression/tst_hklinfo.py to tst_hklinfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py2.py to webbrowser_messenger_py2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklviewer_gui.py to hklviewer_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtricorder_runner.py to xtricorder_runner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/display2.py to display2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/HKLviewer.py to HKLviewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/preset_buttons.py to preset_buttons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/chimeraX_wheel_src/tool.py to tool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/webbrowser_messenger_py3.py to webbrowser_messenger_py3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt.py to qt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/xtriage_runner.py to xtriage_runner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/hklview_frame.py to hklview_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/jsview_3d.py to jsview_3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/qt_chromium_check.py to qt_chromium_check.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/cmdlineframes.py to cmdlineframes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/helpers.py to helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/crys3d/hklviewer/default_user_preset_buttons.py to default_user_preset_buttons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/extract_script_from_html_cctbx_doc.py to extract_script_from_html_cctbx_doc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_py_from_html.py to tst_py_from_html.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/exercise.py to exercise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_18_doc_programming_tips_2.py to tst_18_doc_programming_tips_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_8_doc_maps_intro.py to tst_8_doc_maps_intro.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_15_doc_models_hierarchy.py to tst_15_doc_models_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_17_script_rfactors.py to tst_17_script_rfactors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_2_doc_hlo_intro.py to tst_2_doc_hlo_intro.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_3_doc_hlo_model_manager.py to tst_3_doc_hlo_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_16_script_lbfgs_with_curvature.py to tst_16_script_lbfgs_with_curvature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_12_script_compare_ss.py to tst_12_script_compare_ss.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_7_doc_low_flex_advanced.py to tst_7_doc_low_flex_advanced.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_1_template.py to tst_1_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_19_doc_programming_tips_3.py to tst_19_doc_programming_tips_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_10_doc_programming_tips_1.py to tst_10_doc_programming_tips_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_14_script_lbfgs_no_curvature.py to tst_14_script_lbfgs_no_curvature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_6_doc_hlo_model_map_manager.py to tst_6_doc_hlo_model_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_11_script_1.py to tst_11_script_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_5_doc_hlo_map_manager.py to tst_5_doc_hlo_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_9_doc_maps_boxing.py to tst_9_doc_maps_boxing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_13_script_ideal_ss.py to tst_13_script_ideal_ss.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx_website/regression/tst_4_doc_hlo_data_manager.py to tst_4_doc_hlo_data_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/dump.py to dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cbflib_adaptbx/exercise_compression.py to exercise_compression.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/optional.py to optional.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/rational.py to rational.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/python.py to python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/tuple.py to tuple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/boost/std_pair.py to std_pair.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/divide_by_zero.py to divide_by_zero.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_platform_info.py to show_platform_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/inexact.py to inexact.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/gcd.py to gcd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/lcm.py to lcm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/double_overflow.py to double_overflow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/segmentation_fault.py to segmentation_fault.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/nested_cpp_loops_with_check_signals.py to nested_cpp_loops_with_check_signals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/command_line/int_overflow.py to int_overflow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/hybrid_times.py to hybrid_times.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/minimum_cut_enumerate.py to minimum_cut_enumerate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/utility.py to utility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/graph_structure_comparison.py to graph_structure_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/breadth_first_search.py to breadth_first_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/metric.py to metric.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/connected_component_algorithm.py to connected_component_algorithm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/clustering_algorithm.py to clustering_algorithm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/min_cut_max_flow.py to min_cut_max_flow.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/graph/maximum_clique.py to maximum_clique.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/boost_adaptbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/all_his.py to all_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/rotamer_manager.py to rotamer_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/sample_rotamers.py to sample_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/idealized_aa_residues/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/find_ss_from_ca.py to find_ss_from_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_io.py to tst_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_ss_id_ncs.py to tst_ss_id_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_3.py to tst_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_2.py to tst_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/build/tst_1.py to tst_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_segid.py to tst_segid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/secondary_structure_params.py to secondary_structure_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/proteins.py to proteins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/regularize_from_pdb.py to regularize_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/tst_insertion_codes.py to tst_insertion_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/secondary_structure/nucleic_acids.py to nucleic_acids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_bulk_solvent_and_scaling.py to tst_bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/kbu_refinery.py to kbu_refinery.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_flat_nonuniform.py to tst_flat_nonuniform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_mosaic.py to tst_mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/multi_mask_bulk_solvent.py to multi_mask_bulk_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/mosaic.py to mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/bulk_solvent_and_scaling.py to bulk_solvent_and_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_aniso_scaler.py to tst_aniso_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example2.py to example2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_fit_kexpb_to_ktotal.py to tst_fit_kexpb_to_ktotal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_kb_sol_u_star_fd.py to tst_kb_sol_u_star_fd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/tst_scaler.py to tst_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/example.py to example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/f_model_all_scales.py to f_model_all_scales.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/bulk_solvent/scaler.py to scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/clashes.py to clashes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/tst_hbond.py to tst_hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/data_filtering.py to data_filtering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/nci/skew_kurt_plot.py to skew_kurt_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/grow_density.py to grow_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_8.py to tst_parameterization_8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/neutron_utils.py to neutron_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_3.py to tst_add_hydrogen_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_minimize.py to tst_riding_minimize.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_1.py to tst_riding_fd_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_9.py to tst_parameterization_9.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_3.py to tst_parameterization_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/riding.py to riding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_5.py to tst_parameterization_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_2.py to tst_parameterization_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/validate_H.py to validate_H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_validate_H.py to tst_validate_H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_7.py to tst_parameterization_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/find.py to find.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/specialised_hydrogen_atoms.py to specialised_hydrogen_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/connectivity.py to connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/parameterization.py to parameterization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_4.py to tst_riding_fd_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_6.py to tst_parameterization_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_4.py to tst_parameterization_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_2.py to tst_riding_fd_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_5.py to tst_riding_fd_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/build_hydrogens.py to build_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_2.py to tst_add_hydrogen_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_coefficients.py to tst_riding_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_parameterization_1.py to tst_parameterization_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/reduce_hydrogen.py to reduce_hydrogen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_0.py to tst_add_hydrogen_0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_fd_3.py to tst_riding_fd_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen.py to tst_add_hydrogen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_riding_manager.py to tst_riding_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/hydrogens/tst_add_hydrogen_time.py to tst_add_hydrogen_time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_rcsb_web_services.py to tst_rcsb_web_services.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/standard_geometry_cif.py to standard_geometry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/tst_standard_geometry_cif.py to tst_standard_geometry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/wwpdb/rcsb_web_services.py to rcsb_web_services.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/identify.py to identify.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_parameters.py to tst_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pickle.py to tst_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_geometries.py to tst_geometries.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/environment.py to environment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca.py to tst_pick_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier_01.py to tst_classifier_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/dump_sites.py to dump_sites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/svm/tst_classifier_02.py to tst_classifier_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_ca_svm.py to tst_pick_ca_svm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_symmetry_axis.py to tst_symmetry_axis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_ca.py to tst_validate_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_k.py to tst_pick_k.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_mg.py to tst_pick_mg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/build.py to build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/halides.py to halides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_validate_mg.py to tst_validate_mg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_environment.py to tst_environment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ions/tst_pick_approx_zn.py to tst_pick_approx_zn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/rotatable_bonds.py to rotatable_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/tst_switch_rotamers.py to tst_switch_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/grid2d.py to grid2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/ntc.py to ntc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/utils/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_masks.py to tst_masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/masks/tst_asu_mask.py to tst_asu_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_maxlik.py to tst_maxlik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/max_like_non_uniform.py to max_like_non_uniform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/maxlik.py to maxlik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/max_lik/tst_max_lik.py to tst_max_lik.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group_2.py to tst_group_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/print_statistics.py to print_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/group.py to group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_real_space_simple.py to tst_real_space_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_ncs_constraints.py to minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_anomalous_scatterer_groups.py to tst_anomalous_scatterer_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights.py to weights.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/adp_refinement.py to adp_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/data.py to data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_rigid_body_groups_from_pdb_chains.py to tst_rigid_body_groups_from_pdb_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wrappers.py to wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_misc.py to tst_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/minimization_monitor.py to minimization_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_group.py to tst_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/flip_peptide_side_chain.py to flip_peptide_side_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/orca.py to orca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/weights_params.py to weights_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_utils.py to ensemble_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/ensemble_probability.py to ensemble_probability.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/ensemble_refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/anomalous_scatterer_groups.py to anomalous_scatterer_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1H.py to tst_fit_residues_1H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_4.py to tst_fit_residues_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0H.py to tst_fit_residue_0H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/weight.py to weight.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_full_sampling.py to tst_fit_residue_full_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_rigid_body.py to tst_rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_1.py to tst_individual_sites_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_his.py to fit_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_3.py to tst_individual_sites_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_water.py to tst_fit_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/individual_sites.py to individual_sites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_6.py to tst_fit_residues_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/rigid_body.py to rigid_body.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/explode_and_refine.py to explode_and_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1.py to tst_fit_residue_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_small_molecule.py to fit_small_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_selection.py to tst_fit_residues_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/adp.py to adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_2.py to tst_fit_residues_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_water.py to fit_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_1.py to tst_fit_residues_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residues.py to fit_residues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_7.py to tst_fit_residue_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_0.py to tst_fit_residue_0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_4.py to tst_fit_residue_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_5.py to tst_fit_residue_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_weight.py to tst_weight.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_6.py to tst_fit_residue_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_2.py to tst_fit_residue_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_3.py to tst_fit_residues_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_aa_residue_axes_and_clusters.py to tst_aa_residue_axes_and_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residues_5.py to tst_fit_residues_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_monitor.py to tst_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_3.py to tst_fit_residue_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/fit_residue.py to fit_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_individual_sites_2.py to tst_individual_sites_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/real_space/tst_fit_residue_1H.py to tst_fit_residue_1H.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/calculators.py to calculators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/inspect_tardy_trajectory.py to inspect_tardy_trajectory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/energy_monitor.py to energy_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/refinement_flags.py to refinement_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/targets.py to targets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/occupancies.py to occupancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_select_best_starting_model.py to tst_select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_fit_rotamers.py to tst_fit_rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_refinement_flags.py to tst_refinement_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tst_occupancy_selections.py to tst_occupancy_selections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/wx_tardy_pdb.py to wx_tardy_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/refinement/tardy.py to tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/proq2.py to proq2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/nrubs.py to nrubs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/kinemage/validation.py to validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/msa.py to msa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ordered_solvent.py to ordered_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/ensemble_ordered_solvent.py to ensemble_ordered_solvent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/solvent/map_to_water.py to map_to_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/domains_from_pae.py to domains_from_pae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_distances.py to pdb_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/f_model.py to f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/find_peaks.py to find_peaks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development_fem.py to development_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/distance_difference.py to distance_difference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_analysis.py to tls_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_peaks_holes.py to find_peaks_holes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fetch_pdb.py to fetch_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reciprocal_space_arrays.py to reciprocal_space_arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/massage_data.py to massage_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mtz2map.py to mtz2map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/grow_density.py to grow_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_restraints.py to secondary_structure_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_map.py to model_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/helix_sheet_recs_as_pdb_files.py to helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/secondary_structure_validation.py to secondary_structure_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_structure_factors.py to map_to_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_model_distances.py to model_model_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/super.py to super.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/refine_anomalous_substructure.py to refine_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_residue_in_pdb.py to find_residue_in_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/kinemage.py to kinemage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/reduce2.py to reduce2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/search_pdb_symmetry.py to search_pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prune_model.py to prune_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/geometry_minimization.py to geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cif_as_mtz.py to cif_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_comparison.py to map_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validate_H_cl_app.py to validate_H_cl_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/altloc_remediate.py to altloc_remediate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sort_hetatms.py to sort_hetatms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/r_factor_statistics.py to r_factor_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/density_modification.py to density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/xmanip.py to xmanip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maps.py to maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_validate.py to cablam_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cc_star.py to cc_star.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/molprobity.py to molprobity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_cablam_cache.py to rebuild_cablam_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam_training.py to cablam_training.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/find_tls_groups.py to find_tls_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ringer.py to ringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_box.py to map_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/map_to_model_histogram.py to map_to_model_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/models_as_chains.py to models_as_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rigid_bond_test.py to rigid_bond_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/estimate_bijvoet_ratio.py to estimate_bijvoet_ratio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/f000.py to f000.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/table_one.py to table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_vs_map.py to model_vs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fake_f_obs.py to fake_f_obs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rebuild_rotarama_cache.py to rebuild_rotarama_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/verify_mon_lib_data.py to verify_mon_lib_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/real_space_diff_map.py to real_space_diff_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mon_lib_cif_triage.py to mon_lib_cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/probe2.py to probe2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/angle.py to angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/maximum_entropy_map.py to maximum_entropy_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/model_idealization.py to model_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fab_elbow_angle.py to fab_elbow_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/perigee.py to perigee.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/dynamics.py to dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/development.aev.py to development.aev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/emringer_score.py to emringer_score.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/tls.py to tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/select_best_starting_model.py to select_best_starting_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/fmodel.py to fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/electrons.py to electrons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/validation_summary.py to validation_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/sisa.py to sisa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/rank_scale_map.py to rank_scale_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_atom_selection.py to pdb_atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/apply_ncs_to_ligand.py to apply_ncs_to_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py to show_r_factors_by_shell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename_old.py to suitename_old.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdbtools.py to pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/reduce2.py to reduce2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_puckers.py to rna_validate_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_bonds.py to rna_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_idealization.py to ss_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hydrogenate.py to hydrogenate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate_suites.py to rna_validate_suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/hbond.py to hbond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/water_b_factors.py to water_b_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ribbons.py to ribbons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/chiral_validation.py to chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/probe2.py to probe2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/ss_validation.py to ss_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/arginine_geometry.py to arginine_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/fmodel.py to fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/prepare_pdb_deposition.py to prepare_pdb_deposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/programs/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/tst_ias.py to tst_ias.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ias/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rsr/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space_correlation.py to real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/indexing.py to indexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/topology.py to topology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/clash.py to clash.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/altloc.py to altloc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/sphere_surface_sampling.py to sphere_surface_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/shared_types.py to shared_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry/asa.py to asa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/f_model_info.py to f_model_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ligands.py to ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/convert_lists.py to convert_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comparama.py to comparama.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore.py to clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/datasets.py to datasets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/model_properties.py to model_properties.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/comprehensive_residue.py to comprehensive_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbetadev.py to cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cbd_utils.py to cbd_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/validate_ligands.py to validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser.py to undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/omegalyze.py to omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/waters.py to waters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/undowser2.py to undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rotalyze.py to rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/barbed_wire_analysis.py to barbed_wire_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramalyze.py to ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/graphics.py to graphics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/percentile_clashscore.py to percentile_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/probescore_ligand.py to probescore_ligand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/kinemage_templates.py to kinemage_templates.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/table_from_json.py to table_from_json.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/mp_geo.py to mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/molprobity/percentile_mpscore.py to percentile_mpscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_others_phi_psi.py to mean_devs_others_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/clashscore2.py to clashscore2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/cablam.py to cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rama_z.py to rama_z.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/holton_geometry_validation.py to holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/experimental.py to experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/rna_validate.py to rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/chain_comparison.py to chain_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_VAL_THR_ILE_phi_psi.py to mean_devs_VAL_THR_ILE_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ensembles.py to ensembles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_chiral_volume_cases.py to tst_mp_geo_chiral_volume_cases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_3.py to tst_molprobity_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo.py to tst_mp_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev.py to tst_cbetadev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rna_validate.py to tst_rna_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_find_region_max_value.py to tst_find_region_max_value.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_suitename.py to tst_suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore_2.py to tst_clashscore_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam_2.py to tst_cablam_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_1.py to tst_molprobity_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cbetadev_02.py to tst_cbetadev_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_arguments.py to tst_molprobity_arguments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_symmetry_SS.py to tst_symmetry_SS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_chiral_validation.py to tst_chiral_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_cablam.py to tst_cablam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_02.py to tst_rama_z_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_geo_endtoend.py to tst_mp_geo_endtoend.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rama_z_01.py to tst_rama_z_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/run_restraints.py to run_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_5.py to tst_molprobity_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_do_flips_clashscore.py to tst_do_flips_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze2.py to tst_ramalyze2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_hydrogen_addition_clashscore.py to tst_hydrogen_addition_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_2.py to tst_molprobity_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser.py to tst_undowser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_ramalyze.py to tst_ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_rotalyze.py to tst_rotalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_omegalyze.py to tst_omegalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_waters.py to tst_waters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_undowser2.py to tst_undowser2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_keep_hydrogens.py to tst_keep_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_molprobity_4.py to tst_molprobity_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_mp_validate_bonds.py to tst_mp_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_model_properties.py to tst_model_properties.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/regression/tst_clashscore.py to tst_clashscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mean_devs_PRO_phi_psi.py to mean_devs_PRO_phi_psi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/analyze_peptides.py to analyze_peptides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/sequence.py to sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/mp_validate_bonds.py to mp_validate_bonds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/ramachandran/convert_from_text.py to convert_from_text.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/validation/fav_lists.py to fav_lists.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip.py to xmanip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model_vs_data.py to model_vs_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/real_space/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains.py to tst_extend_sidechains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/merge_models.py to merge_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_make_library.py to tst_make_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/make_library.py to make_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/minimize_chain.py to minimize_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/tst_extend_sidechains_2.py to tst_extend_sidechains_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/cablam_idealization.py to cablam_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/extend_sidechains.py to extend_sidechains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/tst_00.py to tst_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/ligands/lifi.py to lifi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/berkeley_ramalyze.py to berkeley_ramalyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/custom_gm.py to custom_gm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/ccd.py to ccd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_closure/starting_conformations.py to starting_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/building/loop_idealization.py to loop_idealization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cis_c_n_ca.py to tst_cis_c_n_ca.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl_sf4_coordination.py to mcl_sf4_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/check_cdl_database.py to check_cdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_utils.py to cdl_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/bond_angle_registry.py to bond_angle_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/investigate_rotamer_space.py to investigate_rotamer_space.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_01.py to tst_mcl_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_cdl_class.py to multi_residue_cdl_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hpdl_database.py to hpdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/pH_dependent_restraints.py to pH_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/nucleotides.py to nucleotides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/LinkedResidues.py to LinkedResidues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mutli_residue.py to tst_mutli_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_setup.py to cdl_setup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/metal_coordination_library.py to metal_coordination_library.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega.py to omega.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_multi_residue_rna.py to tst_multi_residue_rna.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_poly_ca_multi_residue.py to tst_poly_ca_multi_residue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/mcl.py to mcl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_svl_database.py to cdl_svl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rna_dna_fragments.py to tst_rna_dna_fragments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/testing_utils.py to testing_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/hydrogen_bonding.py to hydrogen_bonding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/omega_database.py to omega_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_base_class.py to multi_base_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_02.py to tst_mcl_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/sf4_restraints.py to sf4_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/multi_residue_class.py to multi_residue_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/altloc_weighting.py to altloc_weighting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/histidines.py to histidines.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl.py to tst_cdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/cdl_database.py to cdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rdl_database.py to rdl_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_pH_mechanism.py to tst_pH_mechanism.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_nucleotides.py to tst_cdl_nucleotides.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_mcl_03.py to tst_mcl_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/density_dependent_restraints.py to density_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_hpdl.py to tst_hpdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_rdl.py to tst_rdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_cdl_esd.py to tst_cdl_esd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/rotamers.py to rotamers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/conformation_dependent_library/tst_omega_cdl.py to tst_omega_cdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/diangle.py to diangle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/dualparse.py to dualparse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitealyze.py to suitealyze.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitename.py to suitename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenout.py to suitenout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninit.py to suiteninit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/transdent.py to transdent.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suitenamedefs.py to suitenamedefs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/mainchain.py to mainchain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suites.py to suites.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/suitename/suiteninput.py to suiteninput.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/thorough_outlier_test.py to thorough_outlier_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/matthews.py to matthews.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_massage_data.py to tst_massage_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage_twin_analyses.py to tst_xtriage_twin_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/sigmaa_estimation.py to sigmaa_estimation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_absences.py to tst_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/make_param.py to make_param.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pair_analyses.py to pair_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/ta_alpha_beta_calc.py to ta_alpha_beta_calc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/fa_estimation.py to fa_estimation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_outlier.py to tst_outlier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/data_statistics.py to data_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_mean_f_rms_f.py to tst_mean_f_rms_f.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_plan_sad_experiment.py to tst_plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/remove_outliers.py to remove_outliers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/random_omit.py to random_omit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_bayesian_estimator.py to tst_bayesian_estimator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_rejection.py to outlier_rejection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absences.py to absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twin_analyses.py to twin_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_sigmaa.py to tst_sigmaa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/massage_twin_detwin_data.py to massage_twin_detwin_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_xtriage.py to tst_xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/outlier_plots.py to outlier_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_scaling.py to relative_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/tst_scaling.py to tst_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/basic_analyses.py to basic_analyses.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/relative_wilson.py to relative_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/pre_scale.py to pre_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/bayesian_estimator.py to bayesian_estimator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/mean_f_rms_f.py to mean_f_rms_f.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absence_likelihood.py to absence_likelihood.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/twmad_scale.py to twmad_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/scaling/absolute_scaling.py to absolute_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_electron_scripting.py to tst_electron_scripting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_basics.py to ready_set_basics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_xtal_screens.py to tst_xtal_screens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/chemistry.py to chemistry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/xtal_screens.py to xtal_screens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/tst_ready_set_utils.py to tst_ready_set_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/rdkit_utils.py to rdkit_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/ready_set_utils.py to ready_set_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/hierarchy_utils.py to hierarchy_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ligands/electrons.py to electrons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/composite_omit_map.py to composite_omit_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/correlation.py to correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/mtriage.py to mtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fem.py to fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_correlation.py to tst_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_map_model_cc_and_vals_per_atom_xtal.py to tst_map_model_cc_and_vals_per_atom_xtal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/polder.py to polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/kick.py to kick.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/fobs_minus_fobs_map.py to fobs_minus_fobs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/map_model_cc.py to map_model_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_3.py to tst_composite_omit_map_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map.py to tst_composite_omit_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/maps/tst_composite_omit_map_2.py to tst_composite_omit_map_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/process_predicted_model.py to process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/lattice.py to lattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/plot_weights.py to plot_weights.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/den/refinement.py to refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/xmanip_tasks.py to xmanip_tasks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/cif_parser.py to cif_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/chemical_components/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/alignment/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_gui.py to tst_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/output.py to output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/polygon/tst_polygon_data.py to tst_polygon_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_backbone.py to tst_backbone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst_analyze_model.py to tst_analyze_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/backbone.py to backbone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/disorder/analyze_model.py to analyze_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_mixins.py to linking_mixins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation.py to tst_pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_setup.py to linking_setup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rotamer_utils.py to rotamer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_idealized_aa.py to tst_idealized_aa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_metal_coordination.py to tst_metal_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_deuterium_terminii.py to tst_deuterium_terminii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_neutron_distance.py to tst_neutron_distance.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_chiral_values.py to glyco_chiral_values.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/server.py to server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_protein_interpretation.py to tst_protein_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_triage.py to tst_cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_all_cif_files.py to tst_all_cif_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conv_v2_v3.py to conv_v2_v3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/correct_hydrogen_geometries.py to correct_hydrogen_geometries.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_2.py to tst_pdb_interpretation_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_cif_types.py to tst_cif_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_dna_interpretation.py to tst_rna_dna_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_geo_reduce_for_tardy.py to tst_geo_reduce_for_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_chg.py to tst_chg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_iron_sulfur_clusters.py to tst_iron_sulfur_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_linking.py to tst_linking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_coordination.py to tst_glyco_coordination.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_glyco_hand.py to tst_glyco_hand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_selection.py to tst_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/idealized_aa.py to idealized_aa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_types.py to cif_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/hydrogen_restrictions.py to hydrogen_restrictions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_paral_geo.py to tst_paral_geo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rotamer_utils.py to tst_rotamer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/cif_triage.py to cif_triage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/rna_sugar_pucker_analysis.py to rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_rna_sugar_pucker_analysis.py to tst_rna_sugar_pucker_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/linking_utils.py to linking_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/bondlength_defaults.py to bondlength_defaults.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/glyco_utils.py to glyco_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/conformation_dependent_restraints.py to conformation_dependent_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_3.py to tst_pdb_interpretation_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_superpose_ideal.py to tst_superpose_ideal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/populate_auto_linking_origin_ids.py to populate_auto_linking_origin_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_pdb_interpretation_ncs_processing.py to tst_pdb_interpretation_ncs_processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_tyr_from_gly_and_bnz.py to tst_tyr_from_gly_and_bnz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_server.py to tst_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_correct_hydrogens.py to tst_correct_hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/tst_carbo_linking.py to tst_carbo_linking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/monomer_library/pdb_interpretation.py to pdb_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/resolve_resources.py to resolve_resources.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/atomic_environment_vectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_sa.py to tst_sa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/cartesian_dynamics.py to cartesian_dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/tst_cartesian_dynamics.py to tst_cartesian_dynamics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/ensemble_cd.py to ensemble_cd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/dynamics/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm10.py to perm10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm13.py to perm13.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/analysis.py to analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/optimise_amplitudes.py to optimise_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm11.py to perm11.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/ladp.py to ladp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm12.py to perm12.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm15.py to perm15.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/perm14.py to perm14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tls_as_xyz.py to tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/tools.py to tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/tls/decompose.py to decompose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/twin_f_model.py to twin_f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/twinning/probabalistic_detwinning.py to probabalistic_detwinning.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/invariant_domain.py to invariant_domain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/arrays.py to arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_geostd_vs_sidechain_angles_props.py to tst_geostd_vs_sidechain_angles_props.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/n_dim_table.py to n_dim_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/tst_rotamer_eval.py to tst_rotamer_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/nqh.py to nqh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval.py to ramachandran_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/graphics.py to graphics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/ramachandran_eval_deprecated.py to ramachandran_eval_deprecated.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/rotamer_eval.py to rotamer_eval.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/rotamer/sidechain_angles.py to sidechain_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geo_min_restraints_phil.py to tst_geo_min_restraints_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel.py to tst_fmodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model_cif.py to tst_process_predicted_model_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb_cif.py to tst_regularize_from_pdb_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mtz2map.py to tst_mtz2map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sort_hetatms.py to tst_sort_hetatms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers.py to tst_mmtbx_refinement_wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_alignment.py to tst_alignment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_angle.py to tst_angle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_fd.py to tst_fmodel_fd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_no_cryst1.py to tst_fmodel_no_cryst1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_arrows_on_plot.py to tst_add_arrows_on_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_models_to_from_chains.py to tst_models_to_from_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae_cif.py to tst_domains_from_pae_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ml_estimate.py to tst_ml_estimate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder.py to tst_polder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_metal_link_1.py to tst_metal_link_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_type_parser.py to tst_map_type_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_process_predicted_model.py to tst_process_predicted_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison.py to tst_chain_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validation_summary.py to tst_validation_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_special_term_at_end.py to tst_special_term_at_end.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_scattering_type_registry.py to tst_scattering_type_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_apply_cif_restraints.py to tst_apply_cif_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce_timeout.py to tst_reduce_timeout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_table_one.py to tst_table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rigid_bond_test.py to tst_rigid_bond_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_remediate.py to tst_altloc_remediate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_refine_anomalous_substructure.py to tst_refine_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_reduce.py to tst_reduce.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_flipping_his.py to tst_flipping_his.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_altloc_chain_break.py to tst_altloc_chain_break.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_probe.py to tst_probe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_add_h_to_water.py to tst_add_h_to_water.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain.py to tst_minimize_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_loop_closure.py to tst_loop_closure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_sequence_validation.py to tst_sequence_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_vs_map.py to tst_model_vs_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_maps_misc.py to tst_maps_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_origin_ids.py to tst_origin_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_schrodinger_interface.py to tst_schrodinger_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_ccs.py to tst_polder_ccs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_chain_comparison_cif.py to tst_chain_comparison_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_clashes.py to tst_clashes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_2.py to tst_polder_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_minimize_chain_cif.py to tst_minimize_chain_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_pdbtools.py to tst_pdbtools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/make_fake_anomalous_data.py to make_fake_anomalous_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_statistics_output.py to tst_statistics_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ncs.py to tst_find_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_prune_model.py to tst_prune_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_symmetry.py to tst_model_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_remove_alternative_conformations.py to tst_model_remove_alternative_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_dedeuterate.py to tst_model_dedeuterate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix.py to tst_model_biomt_mtrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_merge.py to tst_model_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model.py to tst_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_neutralize_scatterers.py to tst_model_neutralize_scatterers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_set_hydrogen_bond_length.py to tst_model_set_hydrogen_bond_length.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ncs.py to tst_model_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_ramachandran.py to tst_model_ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_utils_merge_models.py to tst_model_utils_merge_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_mtrix.py to tst_model_mtrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_biomt_mtrix_2.py to tst_model_biomt_mtrix_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_tors_ref_restraints.py to tst_model_tors_ref_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_get_vdw_radii.py to tst_model_get_vdw_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_2.py to tst_model_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/model/tst_model_cart_ref_restraints.py to tst_model_cart_ref_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_misc.py to tst_fmodel_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_holton_geometry_validation.py to tst_holton_geometry_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure_cif.py to tst_find_ss_structure_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_helix_sheet_recs_as_pdb_files.py to tst_helix_sheet_recs_as_pdb_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_adp_restraints.py to tst_adp_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_regularize_from_pdb.py to tst_regularize_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_command_line_input.py to tst_command_line_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_box.py to tst_polder_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ringer.py to tst_ringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_as_xyz.py to tst_tls_as_xyz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_2igd.py to tst_formula_t_S_10_vs_11_2igd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_01.py to tst_u_tls_vs_u_ens_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_utils.py to tst_tls_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_optimise_amplitudes.py to tst_tls_optimise_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_formula_t_S_10_vs_11_4muy.py to tst_formula_t_S_10_vs_11_4muy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_02.py to tst_u_tls_vs_u_ens_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_04.py to tst_u_tls_vs_u_ens_04.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_analysis.py to tst_tls_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_03.py to tst_u_tls_vs_u_ens_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_u_tls_vs_u_ens_00.py to tst_u_tls_vs_u_ens_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_tls_refinement_fft.py to tst_tls_refinement_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tls/tst_get_t_scheme.py to tst_get_t_scheme.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_psi_phi_extraction.py to tst_psi_phi_extraction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_model_map.py to tst_model_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_anomalous_substructure.py to tst_anomalous_substructure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_isomorphous_difference_misc.py to tst_isomorphous_difference_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_rank_scale_map.py to tst_rank_scale_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_msa.py to tst_msa.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_geometry_minimization.py to tst_geometry_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_3.py to tst_polder_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_domains_from_pae.py to tst_domains_from_pae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_dynamics_cli.py to tst_dynamics_cli.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_map_model_cc.py to tst_map_model_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cif_as_mtz_wavelengths.py to tst_cif_as_mtz_wavelengths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_fmodel_2.py to tst_fmodel_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_multi_residue_class.py to tst_multi_residue_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cc_star.py to tst_cc_star.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_validate_ligands.py to tst_validate_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_real_space_correlation.py to tst_real_space_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints2.py to tst_minimization_ncs_constraints2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_restraints.py to tst_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints3.py to tst_minimization_ncs_constraints3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints_real_space.py to tst_minimization_ncs_constraints_real_space.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_restraints_group_list.py to tst_ncs_restraints_group_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_minimization_ncs_constraints.py to tst_minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_utils.py to tst_ncs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search.py to tst_ncs_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_geometry_minimization_ncs_constraints.py to tst_geometry_minimization_ncs_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/ncs/tst_ncs_search_flips.py to tst_ncs_search_flips.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_ligand_ncs.py to tst_ligand_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_mmtbx_refinement_wrappers_1.py to tst_mmtbx_refinement_wrappers_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_cis_trans_peptide_link.py to tst_cis_trans_peptide_link.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_polder_1.py to tst_polder_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/regression/tst_find_ss_structure.py to tst_find_ss_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/tst_mmtbx_probe_ext.py to tst_mmtbx_probe_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/AtomTypes.py to AtomTypes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/Helpers.py to Helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/probe/CompareOriginalAndNewProbeAtomInfo.py to CompareOriginalAndNewProbeAtomInfo.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/base_qm_manager.py to base_qm_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qm_manager.py to qm_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate.py to tst_reference_coordinate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/orca_manager.py to orca_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/qi_utils.py to qi_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/mopac_manager.py to mopac_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_interface.py to quantum_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_c_beta_restraints.py to tst_c_beta_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_reference_coordinate2.py to tst_reference_coordinate2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/external.py to external.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_ramachandran.py to tst_ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/torsion_ncs.py to torsion_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model_ligands.py to tst_reference_model_ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/rotamer_search.py to rotamer_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/reference_model.py to reference_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_torsion_ncs.py to tst_torsion_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/torsion_restraints/tst_reference_model.py to tst_reference_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/c_beta.py to c_beta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/tst_manager.py to tst_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/afitt.py to afitt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/reference.py to reference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/ramachandran.py to ramachandran.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/geometry_restraints/quantum_restraints_manager.py to quantum_restraints_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_masks.py to mod_masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_input.py to mod_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_util.py to mod_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_optimize.py to mod_optimize.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_ga.py to mod_ga.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/mod_mtz.py to mod_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/optimize/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/sisa/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_00.py to tst_00.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_02.py to tst_02.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_04.py to tst_04.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/pair_interaction.py to pair_interaction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_05.py to tst_05.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_03.py to tst_03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pair_interaction/tst_01.py to tst_01.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/cartesian_restraints.py to cartesian_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_utils.py to ncs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ligands.py to ligands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs.py to ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_search.py to ncs_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_restraints_group_list.py to ncs_restraints_group_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/tncs.py to tncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ncs/ncs_params.py to ncs_params.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/density_modification/tst_density_modification.py to tst_density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Movers.py to Movers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/tst_mmtbx_reduce_ext.py to tst_mmtbx_reduce_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/Optimizers.py to Optimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/reduce/InteractionGraph.py to InteractionGraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_emringer.py to tst_emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/tst_em_rscc.py to tst_em_rscc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_scoring.py to em_scoring.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rolling.py to em_rolling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/mmtbx/ringer/em_rscc.py to em_rscc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/fit_3_gaussian.py to fit_3_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/test_3_gaussian.py to test_3_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/vonHamos/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/jf4m_geom2nexus.py to jf4m_geom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/pal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/write_composite_image.py to write_composite_image.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_from_defs.py to agipd_from_defs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/agipd_cxigeom2nexus.py to agipd_cxigeom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/euxfel/read_geom.py to read_geom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/jf16m_cxigeom2nexus.py to jf16m_cxigeom2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/sync_jf16m_geometry.py to sync_jf16m_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/swissfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/cctbx_xfel_installer.py to cctbx_xfel_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_file_matcher.py to dials_file_matcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/reflection_length.py to reflection_length.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/mp.py to mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/weather.py to weather.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/drift.py to drift.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/image_pickle_locator.py to image_pickle_locator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/kapton_2019_correction_frame_frame_plugin.py to kapton_2019_correction_frame_frame_plugin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/split_detector.py to split_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/util/dials_pickle_reader.py to dials_pickle_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_calibration.py to fee_calibration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xtc_process.py to cxi_xtc_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_optical2cbfheader.py to cxi_optical2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/ensemble_refine_pipeline.py to ensemble_refine_pipeline.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence2.py to cspad_detector_congruence2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/print_pickle.py to print_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_display_metrology.py to cxi_display_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_detail.py to xpp_progress_detail.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/stills_merge.py to stills_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map_cbf.py to convert_gain_map_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_unpickler.py to frame_unpickler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/show_spot_separation.py to show_spot_separation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/smooth_spectrum.py to smooth_spectrum.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_congruence.py to cspad_detector_congruence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_lsf.py to cxi_lsf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_dump.py to xtc_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_index.py to cxi_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/calc_gain_ratio.py to calc_gain_ratio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_xmerge.py to cxi_xmerge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pbs.py to cxi_pbs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cspad_pinwheel.py to cxi_cspad_pinwheel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/get_next_trial_id.py to get_next_trial_id.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/striping.py to striping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants_cbf.py to quadrants_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pickle2cbf.py to cxi_pickle2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_psana.py to cxi_psana.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/runs_sentinel.py to runs_sentinel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/convert_gain_map.py to convert_gain_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_spots.py to cxi_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cctbx_integration_pickle_viewer.py to cctbx_integration_pickle_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trumpet_plots.py to trumpet_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_shifts.py to cspad_detector_shifts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_mpi_submit.py to cxi_mpi_submit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/launch_fxs.py to launch_fxs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_isoform.py to xpp_isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/fee_view.py to fee_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_manager.py to experiment_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mask.py to make_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/auto_submit.py to auto_submit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_cbfheader2slaccalib.py to cxi_cbfheader2slaccalib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jungfrau_metrics.py to jungfrau_metrics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_json_to_cbf_def.py to experiment_json_to_cbf_def.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_trials.py to monitor_trials.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_apply_metrology.py to cxi_apply_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_parameters.py to cxi_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/frame_extractor.py to frame_extractor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_diff.py to cxi_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cbf_average.py to cbf_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_stream_to_pickle.py to cxi_stream_to_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/find_highres_shots.py to find_highres_shots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/view_pixel_histograms.py to view_pixel_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_mar_mask.py to make_mar_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_pyana.py to cxi_pyana.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/metrology.py to metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/monitor_detectors.py to monitor_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/weather.py to weather.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/h5_average.py to h5_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/list_db_metadata.py to list_db_metadata.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_cbf_metrology.py to cspad_cbf_metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/jobs_sentinel.py to jobs_sentinel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/upload_mtz.py to upload_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/quadrants.py to quadrants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/plot_to_subpixel.py to plot_to_subpixel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/FEE_average_plot.py to FEE_average_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/riso.py to riso.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/make_dials_mask.py to make_dials_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_simulate.py to xpp_simulate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/overlay_spectra.py to overlay_spectra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/trial_stats.py to trial_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_merge.py to cxi_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xtc_process.py to xtc_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/experiment_residuals.py to experiment_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/subtract_background.py to subtract_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/beamcenter.py to beamcenter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/or_mask.py to or_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/detector_residuals.py to detector_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_detector_statistics.py to cspad_detector_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xfel_process.py to xfel_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/mpi_average.py to mpi_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/drift.py to drift.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_slaccalib2cbfheader.py to cxi_slaccalib2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/recompute_mosaicity.py to recompute_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cspad_circular_gain_mask.py to cspad_circular_gain_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_detector_format_versions.py to cxi_detector_format_versions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_plotcv.py to cxi_plotcv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_calibdir2cbfheader.py to cxi_calibdir2cbfheader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/filter_experiments_by_rmsd.py to filter_experiments_by_rmsd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_generate_circular_gain_mask.py to cxi_generate_circular_gain_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/xpp_progress_bar.py to xpp_progress_bar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/command_line/cxi_view.py to cxi_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/metrology2phil.py to metrology2phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cftbx/detector/cspad_cbf_tbx.py to cspad_cbf_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/graph.py to graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/parameter_optimizer.py to parameter_optimizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/multiproc_temp_parame_opt.py to multiproc_temp_parame_opt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/graph_proc/components.py to components.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/psana_cctbx.py to psana_cctbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/lcls_api/exercise_api.py to exercise_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_mask.py to mpi_fxs_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_launch.py to mpi_fxs_launch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_calib.py to mpi_fxs_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_index.py to mpi_fxs_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_bg.py to mpi_fxs_bg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/fxs.py to fxs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_hit.py to pnccd_hit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/mpi_fxs_c2.py to mpi_fxs_c2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/pnccd_ana/pnccd_tbx.py to pnccd_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/amo/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/max_like_pos_neg.py to max_like_pos_neg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/mono_treatment.py to mono_treatment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/api.py to api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_intensity_statistics.py to cluster_intensity_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_42.py to cluster_42.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_unit_cell.py to cluster_unit_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_visualise_orientations.py to cluster_visualise_orientations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/command_line/cluster_per_frame_wilson.py to cluster_per_frame_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster.py to cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/simulate_partial_data.py to simulate_partial_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/singleframe.py to singleframe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/clustering/cluster_groups.py to cluster_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_isoform_cloud.py to plot_isoform_cloud.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud_from_experiments.py to plot_uc_cloud_from_experiments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/print_run_stats.py to print_run_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_in_gui.py to plot_run_stats_in_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_spotfinder_stats_in_gui.py to plot_spotfinder_stats_in_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats_from_experiments.py to plot_run_stats_from_experiments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_run_stats.py to plot_run_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/xfel_gui_launch.py to xfel_gui_launch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_uc_cloud.py to plot_uc_cloud.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/ui_server.py to ui_server.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/plot_reflection_stats.py to plot_reflection_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/command_line/get_hit_timestamps.py to get_hit_timestamps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dxtbx_db.py to dxtbx_db.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/dataset.py to dataset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/trial.py to trial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/rungroup.py to rungroup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/frame_logging.py to frame_logging.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/run.py to run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/job.py to job.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/task.py to task.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/merging_log_scraper.py to merging_log_scraper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/experiment.py to experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/xfel_db.py to xfel_db.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/tag.py to tag.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/cfgs/shifter_templates.py to shifter_templates.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/db/stats.py to stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_controls.py to xfel_gui_controls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/run_stats_plotter.py to run_stats_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/ebeam_plotter.py to ebeam_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/tooltips.py to tooltips.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_init.py to xfel_gui_init.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_scraper.py to spotfinder_scraper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/submission_tracker.py to submission_tracker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/spotfinder_plotter.py to spotfinder_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/timeit.py to timeit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_dialogs.py to xfel_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/components/xfel_gui_plotter.py to xfel_gui_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/ui/phil_patch.py to phil_patch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark0.py to mark0.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark1.py to mark1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/quadrant.py to quadrant.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/flatfile.py to flatfile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/panel_fitting.py to panel_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark10.py to mark10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/legacy_scale/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/metrology/mark3.py to mark3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/small_cell.py to small_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/powder_util.py to powder_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot.py to cake_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/candidate_cells.py to candidate_cells.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/powder_from_spots.py to powder_from_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/xfel_small_cell_process.py to xfel_small_cell_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_process.py to small_cell_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/small_cell_index.py to small_cell_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/command_line/cake_plot_prep.py to cake_plot_prep.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/write_orientation_arrows.py to write_orientation_arrows.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/small_cell/solve_orientation.py to solve_orientation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/data_utils.py to data_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cxi_cc.py to cxi_cc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_factory.py to postrefinement_factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/strong_zulu.py to strong_zulu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/completeness_plot.py to completeness_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/integrate_image_api.py to integrate_image_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/einsle.py to einsle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump.py to mod_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/pixel_histograms.py to pixel_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hdf5.py to mod_hdf5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/rayonix_tbx.py to rayonix_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_image_dict.py to mod_image_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_code.py to mod_event_code.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_histograms.py to xes_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_xes.py to mod_xes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_mar.py to mod_mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/histogram_finalise.py to histogram_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/hitfinder_tbx.py to hitfinder_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_faster_histograms.py to xes_faster_histograms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/display_calib.py to display_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_onecolor_spectrum_filter.py to mod_onecolor_spectrum_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/cspad_tbx.py to cspad_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_event_info.py to mod_event_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_param.py to mod_param.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/average_tbx.py to average_tbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_hitfind.py to mod_hitfind.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_view.py to mod_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_remote_only.py to mod_spectrum_filter_remote_only.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter_v2.py to mod_spectrum_filter_v2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_filter.py to mod_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/parse_calib.py to parse_calib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_average.py to mod_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_daq_status.py to mod_daq_status.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_radial_average.py to mod_radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/xes_finalise.py to xes_finalise.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_illumination_filter.py to mod_illumination_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_ledge.py to mod_ledge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/common_mode.py to common_mode.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_dump_bitmap.py to mod_dump_bitmap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_spectrum_filter.py to mod_spectrum_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/cspad_ana/mod_pulnix_dump.py to mod_pulnix_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_spots.py to display_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/Cluster.py to Cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/test_cluster.py to test_cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/clustering/SingleFrame.py to SingleFrame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/average_spots.py to average_spots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/trumpet_plot.py to trumpet_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/merging_utils.py to merging_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_updated_rs.py to postrefinement_updated_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_hybrid_rs.py to postrefinement_hybrid_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/spectra_filter.py to spectra_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/postrefinement_legacy_rs.py to postrefinement_legacy_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/display_powder_arcs.py to display_powder_arcs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/wx_detectors.py to wx_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/trials_plot.py to trials_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/cxi/gfx/status_plot.py to status_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_reference.py to reindex_to_reference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/token_passing_left_right.py to token_passing_left_right.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/df_cosym.py to df_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/polarization.py to polarization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/compare_results.py to compare_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/aux_cosym.py to aux_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym_tranch_align.py to cosym_tranch_align.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/cosym.py to cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_to_abc.py to reindex_to_abc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/modify/reindex_cosym.py to reindex_cosym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_load_calculator.py to file_load_calculator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_loader.py to file_loader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/input/file_lister.py to file_lister.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/integrate.py to integrate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/integrate/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_helper.py to mpi_helper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/data_counter.py to data_counter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/utils/memory_usage.py to memory_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/preference.py to preference.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/preference/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/tdata/cell_listing.py to cell_listing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/application.py to application.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/validation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/group_reflections.py to group_reflections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/group/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/experiment_scaler.py to experiment_scaler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/scale/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/worker.py to worker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics_cxi.py to intensity_resolution_statistics_cxi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_resolution_statistics.py to intensity_resolution_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/deltaccint.py to deltaccint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/unit_cell_statistics.py to unit_cell_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/beam_statistics.py to beam_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/intensity_histogram.py to intensity_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/statistics/experiment_resolution_statistics.py to experiment_resolution_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/crystal_model.py to crystal_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/model/resolution_binner.py to resolution_binner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/monitor.py to monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/monitor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/lunus/lunus.py to lunus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/load_balancer.py to load_balancer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/balance/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/reflection_table_utils.py to reflection_table_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs.py to postrefinement_rs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/postrefine/postrefinement_rs2.py to postrefinement_rs2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/merger.py to merger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/merge/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_sr.py to error_modifier_sr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ha14.py to error_modifier_ha14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py to error_modifier_mm24.cpython-312.pyc /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:777: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:792: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:793: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:812: SyntaxWarning: invalid escape sequence '\o' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:831: SyntaxWarning: invalid escape sequence '\s' /usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_mm24.py:860: SyntaxWarning: invalid escape sequence '\m' byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/errors/error_modifier_ev11.py to error_modifier_ev11.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/global_filter.py to global_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/reflection_filter.py to reflection_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/filter/experiment_filter.py to experiment_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/factory.py to factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/application/output/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/phil_validation.py to phil_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/command_line/mpi_integrate.py to mpi_integrate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/absorption.py to absorption.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/general_fcalc.py to general_fcalc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/predictions_to_edges.py to predictions_to_edges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/error_modeler_base.py to error_modeler_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate_and_refine.py to sdfac_propagate_and_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/errors_from_residuals.py to errors_from_residuals.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_lbfgs.py to sdfac_refine_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/reduced_chi_squared.py to reduced_chi_squared.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_propagate.py to sdfac_propagate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine_levmar.py to sdfac_refine_levmar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/error_model/sdfac_refine.py to sdfac_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/statistics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/algorithms/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_sqlite3.py to merging_database_sqlite3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database.py to merging_database.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_flex.py to merging_database_flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/database/merging_database_fs.py to merging_database_fs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/tables/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/report/graphs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/merging/refine.py to refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_support.py to progress_support.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/simulate.py to simulate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/isoform.py to isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/split_pickles.py to split_pickles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/xfel/xpp/progress_utils.py to progress_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/sparse/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgsb.py to lbfgsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minimizers.py to minimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/row_echelon.py to row_echelon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/matrix/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/r3_utils.py to r3_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_vector.py to tst_vector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_set.py to tst_set.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/set.py to set.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/vector.py to vector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stl/tst_map.py to tst_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/golden_section_search.py to golden_section_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/minpack.py to minpack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_lbfgs_fem.py to tst_lbfgs_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_func_free_line_search.py to tst_func_free_line_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_curvatures.py to tst_curvatures.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lbfgs/tst_mpi_split_evaluator.py to tst_mpi_split_evaluator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graphics_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/differential_evolution.py to differential_evolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/iso_surface/tst_iso_surface.py to tst_iso_surface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cross_entropy.py to cross_entropy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/tst_normal_equations.py to tst_normal_equations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/tests/test_problems.py to test_problems.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns_solving.py to normal_eqns_solving.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/lstbx/normal_eqns.py to normal_eqns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/glmtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/genetic_algorithm_with_mp.py to genetic_algorithm_with_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/random/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/breakpoint.py to breakpoint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/cubic_spline.py to cubic_spline.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_peak.py to fit_peak.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/incremental_SO3_sampling.py to incremental_SO3_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/clustering.py to clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/superpose.py to superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sphere_sphere_intersection.py to sphere_sphere_intersection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_similarity_indices.py to tst_similarity_indices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_peak.py to tst_fit_peak.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_error_propagation_matrix_inverse.py to tst_error_propagation_matrix_inverse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_dmatrix.py to tst_dmatrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_clustering.py to tst_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_curve_fitting.py to tst_curve_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_weighted_correlation.py to tst_weighted_correlation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_math.py to tst_math.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_euler_angles.py to tst_euler_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_tetrahedron.py to tst_tetrahedron.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_bessel.py to tst_bessel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_cubic_equation.py to tst_cubic_equation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_resample.py to tst_resample.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian_fit_1d_analytical.py to tst_gaussian_fit_1d_analytical.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_quadrature.py to tst_quadrature.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_fit_quadratic_function.py to tst_fit_quadratic_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_periodogram.py to tst_periodogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_orthonormal_basis.py to tst_orthonormal_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_minimum_covering_ellipsoid.py to tst_minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_angle_derivative.py to tst_angle_derivative.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gcd.py to tst_gcd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_line_search.py to tst_line_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_superpose.py to tst_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_exp_functions.py to tst_exp_functions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_gaussian.py to tst_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_g_function.py to tst_g_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_uniform_rotation_matrix.py to tst_uniform_rotation_matrix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_r3_rotation.py to tst_r3_rotation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tests/tst_halton.py to tst_halton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/boost_python/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900.py to fliege_mayer_900.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/besselk.py to besselk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/undirected_graph.py to undirected_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/lefebvre.py to lefebvre.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_multivariate_moments.py to tst_multivariate_moments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/curve_fitting.py to curve_fitting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/multiple_superposition.py to multiple_superposition.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_240_21.py to des_3_240_21.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/zernike_align_fft.py to zernike_align_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/des_3_100_13.py to des_3_100_13.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_2d_zernike.py to tst_2d_zernike.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_so3_lie_algebra.py to tst_so3_lie_algebra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/spe.py to spe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/chebyshev_lsq_fit.py to chebyshev_lsq_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/minimum_covering_ellipsoid.py to minimum_covering_ellipsoid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gumbel.py to gumbel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_bessel_zeros.py to tst_bessel_zeros.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_undirected_graph.py to tst_undirected_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/euler_angles.py to euler_angles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/distributions.py to distributions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_400.py to fliege_mayer_400.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/sieve_of_eratosthenes.py to sieve_of_eratosthenes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/farey.py to farey.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/scale_curves.py to scale_curves.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fliege_mayer_900_ylm.py to fliege_mayer_900_ylm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/periodogram.py to periodogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/gaussian.py to gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/so3_lie_algebra.py to so3_lie_algebra.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/fit_quadratic_function.py to fit_quadratic_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike.py to tst_zernike.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/math/tst_zernike_mom.py to tst_zernike_mom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/test_cases_tardy_pdb.py to test_cases_tardy_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity.py to rigidity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/rigidity_matrix_symbolic.py to rigidity_matrix_symbolic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_rigidity.py to tst_rigidity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree.py to tst_tardy_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tst_tardy_tree_find_paths.py to tst_tardy_tree_find_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/graph/tardy_tree.py to tardy_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/direct_search_simulated_annealing.py to direct_search_simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion_hard.py to tst_free_motion_hard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_joint_lib.py to wx_joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/featherstone.py to featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_spherical_refinement.py to tst_spherical_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_joint_lib.py to tst_joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_free_motion.py to wx_free_motion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_molecules.py to tst_molecules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_free_motion.py to tst_free_motion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_simulation.py to test_simulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/free_motion_reference_impl.py to free_motion_reference_impl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/wx_molecules.py to wx_molecules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/test_utils.py to test_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_featherstone.py to tst_featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/proto/tst_singular.py to tst_singular.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/joint_lib.py to joint_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_tardy.py to tst_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/wx_tardy.py to wx_tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/featherstone.py to featherstone.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_energy_plots.py to tst_energy_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/body_lib.py to body_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tst_basic.py to tst_basic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/spatial_lib.py to spatial_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/make_bundles.py to make_bundles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/rigid_body/essence/tardy.py to tardy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/simplex.py to simplex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/stdlib/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/shared.py to shared.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_recipe.py to lbfgs_recipe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/chebyshev_lsq_example.py to chebyshev_lsq_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/minimizer_comparisons.py to minimizer_comparisons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/functions.py to functions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_array_loops.py to flex_array_loops.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/integrating_a_weighted_sinc_function.py to integrating_a_weighted_sinc_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/principal_axes_of_inertia.py to principal_axes_of_inertia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/immoptibox_ports.py to immoptibox_ports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/silver.py to silver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/bevington/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/rigid_body_refinement_core.py to rigid_body_refinement_core.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/lbfgs_linear_least_squares_fit.py to lbfgs_linear_least_squares_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/examples/flex_grid.py to flex_grid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/svd.py to svd.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/householder.py to householder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/linalg/eigensystem.py to eigensystem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_transform.py to random_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/robust_statistics.py to robust_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/misc.py to misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/signal_utils.py to signal_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/dicts.py to dicts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_robust.py to tst_robust.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_graph.py to tst_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/tst_random_transform.py to tst_random_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/graph_tools.py to graph_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/python_utils/random_utils.py to random_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/wigner/tst_wigner3j.py to tst_wigner3j.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/single.py to single.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/suffixtree/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/fftpack.py to fftpack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/lbfgs_fem.py to lbfgs_fem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_traits_builtin.py to generate_operator_traits_builtin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_operator_functors.py to generate_operator_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_algebras.py to generate_algebras.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_std_imports.py to generate_std_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_apply.py to generate_apply.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/operator_functor_info.py to operator_functor_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_all.py to generate_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/source_generators/array_family/generate_reductions.py to generate_reductions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/regular_grid_on_unit_sphere.py to regular_grid_on_unit_sphere.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/reparams.py to reparams.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/refinebase.py to refinebase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/optional.py to optional.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/auxiliary.py to auxiliary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/bounds.py to bounds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/minimizer.py to minimizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/min_logging.py to min_logging.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/compulsory.py to compulsory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/twisted_gaussian.py to twisted_gaussian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/dtmin/realsymmetricpseudoinverse.py to realsymmetricpseudoinverse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/cubicle_neighbors.py to cubicle_neighbors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/scitbx/smoothing.py to smoothing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/copy_files.py to copy_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/ccp4io_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/console_utils.py to console_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_state.py to tst_easy_mp_state.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_xmlrpc_utils.py to tst_xmlrpc_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/simplexml.py to simplexml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clusterTests.py to clusterTests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_python_code_parsing.py to tst_python_code_parsing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/dlite.py to dlite.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_program_template.py to tst_program_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/metric_prefixes.py to metric_prefixes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subprocess_with_fixes.py to subprocess_with_fixes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_profile.py to easy_profile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_base_packages.py to install_base_packages.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_distribution.py to install_distribution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/write_gui_dispatcher_include.py to write_gui_dispatcher_include.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/rpath.py to rpath.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/installer_utils.py to installer_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/package_defs.py to package_defs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/setup_installer.py to setup_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_installer.py to create_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/plus_installer.py to plus_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/install_conda.py to install_conda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/make_bundle.py to make_bundle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/regenerate_module_files.py to regenerate_module_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_windows_installer.py to create_windows_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/auto_build/create_mac_pkg.py to create_mac_pkg.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp.py to tst_easy_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/object_oriented_patterns.py to object_oriented_patterns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/find_reference_cycles.py to find_reference_cycles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/fastentrypoints.py to fastentrypoints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/topological_sort.py to topological_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_thread_utils.py to tst_thread_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_representation.py to tst_representation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_server_example.py to xmlrpc_server_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cli.py to cli.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/callbacks.py to callbacks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/containers.py to containers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/thread_utils.py to thread_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/try_hello_world_c.py to try_hello_world_c.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/path.py to path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/complex_math.py to complex_math.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/smart_open.py to smart_open.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_bat.py to install_bat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_runtime_sources.py to copy_runtime_sources.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/install_csh.py to install_csh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_all.py to copy_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/bundle/copy_build_libtbx.py to copy_build_libtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_variable_names.py to show_variable_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_clutter.py to find_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_qstat_counts.py to sge_qstat_counts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_under_build.py to find_under_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/seconds_since_the_epoch.py to seconds_since_the_epoch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_source_files_sorted_by_size.py to list_source_files_sorted_by_size.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/nequal.py to nequal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_binary_bundle.py to start_binary_bundle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bundle_as_exe.py to bundle_as_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/env_run.py to env_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin.py to assert_stdin.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_ext.py to import_all_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_untested.py to find_untested.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_but_no_repr.py to show_but_no_repr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_in_repositories.py to find_in_repositories.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports_crude.py to find_unused_imports_crude.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/start_process.py to start_process.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_unzipsfx.py to create_unzipsfx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install.py to install.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_tree.py to remove_tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_ends_with.py to assert_stdin_ends_with.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_pythonpath.py to show_pythonpath.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/prime_factors_of.py to prime_factors_of.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_full_command_path.py to show_full_command_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_repository_paths.py to show_repository_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_not_show_diff.py to assert_not_show_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/extract_code_from_txt.py to extract_code_from_txt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_dependencies.py to show_python_dependencies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/path_utility.py to path_utility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_module_dependencies.py to show_module_dependencies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/line_count.py to line_count.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_modules.py to list_modules.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_include_paths.py to show_include_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_dist_paths.py to show_dist_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numeric_version.py to show_numeric_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/dtrace.py to dtrace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sphinx_build.py to sphinx_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_path.py to show_build_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_installer.py to create_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_host_and_user.py to show_host_and_user.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_env.py to show_env.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/import_all_python.py to import_all_python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_commands.py to show_commands.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/sge_available_slots.py to sge_available_slots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_windows_exe.py to create_windows_exe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/resource_monitor_plot.py to resource_monitor_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/clean_clutter.py to clean_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/raise_exception_for_testing.py to raise_exception_for_testing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_mac_app.py to create_mac_app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_cctbx_bundle_for_installer.py to create_cctbx_bundle_for_installer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_tests.py to show_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/bootstrap.py to bootstrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_lib_path.py to show_lib_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/add_from_future_import_division.py to add_from_future_import_division.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/any2unix.py to any2unix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_install_script_bat.py to create_install_script_bat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_line_count.py to assert_line_count.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/printenv.py to printenv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_unused_imports.py to find_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/install_conda.py to install_conda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_environ_usage.py to show_environ_usage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_reserved_names.py to find_reserved_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_python_sys_executable.py to show_python_sys_executable.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/parallel_simple.py to parallel_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/git_avoid_merges.py to git_avoid_merges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/help.py to help.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/easy_qsub.py to easy_qsub.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_old_style_classes.py to find_old_style_classes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remote_processing.py to remote_processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/analyse_code_comments.py to analyse_code_comments.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/assert_stdin_contains_strings.py to assert_stdin_contains_strings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/list_files.py to list_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/remove_unused_imports.py to remove_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_tests_parallel.py to run_tests_parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/ipython_shell_start.py to ipython_shell_start.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_sphinx_html.py to make_sphinx_html.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/epydoc_run.py to epydoc_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_all_on_path.py to show_all_on_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_files.py to find_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/scons.py to scons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_build_options.py to show_build_options.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/make_dist.py to make_dist.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/py_compile_all.py to py_compile_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/create_selfx.py to create_selfx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_bin_path.py to show_bin_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_date_and_time.py to show_date_and_time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_number_of_processors.py to show_number_of_processors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/chunk.py to chunk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/show_numpy_version.py to show_numpy_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/check_libcpp.py to check_libcpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/run_pickled_function.py to run_pickled_function.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/wait_for_file.py to wait_for_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/command_line/find_pdb_mmcif_problems.py to find_pdb_mmcif_problems.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_path.py to tst_path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyframe.py to pyframe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/start_print_trace.py to start_print_trace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/clear_paths.py to clear_paths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_object_oriented_patterns.py to tst_object_oriented_patterns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_containers.py to tst_containers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_math_utils.py to tst_math_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/resource_monitor.py to resource_monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/forward_compatibility.py to forward_compatibility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/introspection.py to introspection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_citations.py to tst_citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/load_env.py to load_env.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_mp.py to easy_mp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_template.py to program_template.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/interface.py to interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/parser.py to parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/command_line.py to command_line.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tokenizer.py to tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_interface.py to tst_interface.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/experimental.py to experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_tokenizer.py to tst_tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/tst_experimental.py to tst_experimental.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/phil/gui_objects.py to gui_objects.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_mahalanobis.py to tst_mahalanobis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/subversion.py to subversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cluster.py to cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/math_utils.py to math_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_version.py to tst_version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/env_config.py to env_config.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/python_code_parsing.py to python_code_parsing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_pickle.py to tst_easy_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/wingide.py to wingide.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mp_handler.py to mp_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/stacktrace.py to stacktrace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/job_scheduler.py to job_scheduler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/file_queue.py to file_queue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/result.py to result.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/mainthread.py to mainthread.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/process_pool.py to process_pool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/thread_handler.py to thread_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/parallel_for.py to parallel_for.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/shared_resource.py to shared_resource.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/cluster_handler.py to cluster_handler.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/philgen.py to philgen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/scheduling/socket_queue.py to socket_queue.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/binary_search.py to binary_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_find_unused_imports.py to tst_find_unused_imports.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_dlite.py to tst_dlite.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_pickle.py to easy_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/runtime_utils.py to runtime_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/str_utils.py to str_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/status.py to status.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/transfer.py to transfer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/submission.py to submission.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/polling.py to polling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/processing/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/lsf.py to lsf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/looping.py to looping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/sge_utils.py to sge_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling_helpers.py to scheduling_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/communication.py to communication.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/remote.py to remote.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/pbs_utils.py to pbs_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/generic.py to generic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/queuing_system_utils/scheduling.py to scheduling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/cpp_function_name.py to cpp_function_name.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/SocketServer.py to SocketServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileSocket.py to FileSocket.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/StartServer.py to StartServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileServer.py to FileServer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/server/FileClient.py to FileClient.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/mpi4py.py to mpi4py.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/configure.py to configure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pyplot.py to pyplot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/table_utils.py to table_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/assert_utils.py to assert_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/crossmingw.py to crossmingw.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/easy_run.py to easy_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_binary_search.py to tst_binary_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/xmlrpc_utils.py to xmlrpc_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/except_Exception.py to except_Exception.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/xcode_build_phase.py to xcode_build_phase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/development/timers.py to timers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/pkg_utils.py to pkg_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/file_clutter.py to file_clutter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/citations.py to citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/objgraph.py to objgraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/progress.py to progress.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_str_utils.py to tst_str_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_topological_sort.py to tst_topological_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/code_analysis.py to code_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_fully_buffered_timeout.py to tst_fully_buffered_timeout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/python_string.py to python_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/sphinx/pubmed.py to pubmed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/parallel.py to parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/test_utils/pytest.py to pytest.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/log.py to log.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_runtime_utils.py to tst_runtime_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/result.py to result.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/program_utils/statistics_info.py to statistics_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_easy_mp_multicore.py to tst_easy_mp_multicore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/libtbx/tst_scheduling.py to tst_scheduling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/sample.py to sample.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/self_match.py to self_match.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/annlib_adaptbx/source_generators/generate_all.py to generate_all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/icons.py to icons.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/blast.py to blast.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/reports/pdb_symmetry.py to pdb_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/process_control.py to process_control.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/qstat_view.py to qstat_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/tables.py to tables.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/mtz_dump.py to mtz_dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/windows.py to windows.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/listeditor.py to listeditor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/metallicbutton.py to metallicbutton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/symmetry_dialog.py to symmetry_dialog.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/ensemble_validation.py to ensemble_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/app.py to app.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/monitor.py to monitor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_statistics.py to pdb_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/xtriage.py to xtriage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plan_sad_experiment.py to plan_sad_experiment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py to anomalous_differences_histogram.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/b_plot.py to b_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/loggraph.py to loggraph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/inspect_r_free_flags.py to inspect_r_free_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/wxpython.py to wxpython.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/show_file_info.py to show_file_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py to plot_anomalous_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/heavy_atoms.py to heavy_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/molprobity.py to molprobity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/plots/emringer.py to emringer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/sequence_view.py to sequence_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/layout.py to layout.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/custom_restraints.py to custom_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/b_plot.py to b_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/path_dialogs.py to path_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/bitmaps.py to bitmaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/adp_statistics.py to adp_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/wx4_compatibility.py to wx4_compatibility.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon.py to polygon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/pdb_editor.py to pdb_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floatctrl.py to floatctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/ints.py to ints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tribool.py to tribool.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/floats.py to floats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice_multi.py to choice_multi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/boolctrl.py to boolctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/space_group.py to space_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/path.py to path.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/simple_dialogs.py to simple_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/choice.py to choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/text_base.py to text_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/array_label.py to array_label.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/intctrl.py to intctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/numbers.py to numbers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/unit_cell.py to unit_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/tree.py to tree.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strctrl.py to strctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/symop.py to symop.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/strings.py to strings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/phil_controls/misc_ctrls.py to misc_ctrls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/checklistctrl.py to checklistctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/browser.py to browser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/info_panels.py to info_panels.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/segmentedctrl.py to segmentedctrl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/polygon_db_viewer.py to polygon_db_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/anomalous_scattering.py to anomalous_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/wxtbx/misc_dialogs.py to misc_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/cufft/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/tst_direct_summation.py to tst_direct_summation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/tst_spherical_bessel_jn.py to tst_spherical_bessel_jn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cudatbx/math/special_functions/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCDBG.py to FormatSMVADSCDBG.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN928.py to FormatSMVADSCSN928.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN445.py to FormatSMVADSCSN445.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatStill.py to FormatStill.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5ESRFJungfrau4M.py to FormatHDF5ESRFJungfrau4M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFCspad.py to FormatCBFCspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerChessID7B2.py to FormatCBFMiniEigerChessID7B2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuPilatus.py to FormatSMVRigakuPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVTimePix_SU.py to FormatSMVTimePix_SU.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxED.py to FormatNXmxED.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaMPCCD.py to FormatHDF5SaclaMPCCD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Sacla.py to FormatHDF5Sacla.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVJHSim.py to FormatSMVJHSim.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nxmx_writer.py to nxmx_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTC.py to FormatXTC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsu.py to FormatSMVHamamatsu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN920.py to FormatSMVADSCSN920.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCNoDateStamp.py to FormatSMVADSCNoDateStamp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTileHierarchy.py to FormatCBFMultiTileHierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexus.py to FormatHDF5EigerNearlyNexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN100.py to FormatCBFMiniPilatusDLS6MSN100.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISII.py to FormatRAXISII.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMV.py to FormatSMV.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauExt.py to FormatNexusJungfrauExt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/nexus.py to nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMRC.py to FormatMRC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusHelpers.py to FormatCBFMiniPilatusHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFull.py to FormatCBFFull.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5EigerNearlyNexusSPring8.py to FormatHDF5EigerNearlyNexusSPring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVNOIR.py to FormatSMVNOIR.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI51.py to TemplatePYCXI51.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Format.py to Format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusJungfrauHack.py to FormatNexusJungfrauHack.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSPring8_6MSN125.py to FormatCBFMiniPilatusSPring8_6MSN125.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN926.py to FormatSMVADSCSN926.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN905.py to FormatSMVADSCSN905.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMarIP.py to FormatMarIP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatISISSXD.py to FormatISISSXD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus3APS19ID6MSN132.py to FormatCBFMiniPilatus3APS19ID6MSN132.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerPhoton.py to FormatBrukerPhoton.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN100.py to FormatCBFFullPilatusDLS6MSN100.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN119.py to FormatCBFMiniPilatusDLS6MSN119.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16MI03.py to FormatNXmxDLS16MI03.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatus.py to FormatCBFFullPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixXPP.py to FormatTIFFRayonixXPP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBF.py to FormatCBF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerMaxIVBio.py to FormatCBFMiniEigerMaxIVBio.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS12M.py to FormatCBFMiniPilatusDLS12M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniADSCHF4M.py to FormatCBFMiniADSCHF4M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImage.py to FormatMultiImage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200.py to FormatSMVRigakuA200.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/image.py to image.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFF.py to FormatTIFF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmx.py to FormatNXmx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS16M.py to FormatNXmxDLS16M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMANDI.py to FormatMANDI.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/Registry.py to Registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN07400090.py to FormatSMVRigakuSaturnSN07400090.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusSOLEILPX16MSN106.py to FormatCBFMiniPilatusSOLEILPX16MSN106.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCCspad.py to FormatXTCCspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBruker.py to FormatBruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSC.py to FormatSMVADSC.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuA200SPring8BL26B1.py to FormatSMVRigakuA200SPring8BL26B1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCMultipleDetectors.py to FormatXTCMultipleDetectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5Lambda.py to FormatHDF5Lambda.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXDS.py to FormatXDS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI61.py to TemplatePYCXI61.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI41.py to TemplatePYCXI41.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatGatanDM4.py to FormatGatanDM4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114.py to FormatCBFMiniPilatusDLS6MSN114.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI71.py to TemplatePYCXI71.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/cbf_writer.py to cbf_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullByteOffset.py to FormatCBFFullByteOffset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPilatusHelpers.py to FormatPilatusHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPetraP14.py to FormatCBFMiniEigerPetraP14.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigaku.py to FormatSMVRigaku.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerQuadroED1.py to FormatCBFMiniEigerQuadroED1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVHamamatsuSPring8BL32XU.py to FormatSMVHamamatsuSPring8BL32XU.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerPhotonFactory.py to FormatCBFMiniEigerPhotonFactory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCJungfrau.py to FormatXTCJungfrau.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMultiTile.py to FormatCBFMultiTile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriter.py to FormatNXmxEigerFilewriter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS300KSN104.py to FormatCBFFullPilatusDLS300KSN104.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN126.py to FormatCBFMiniPilatusDLS6MSN126.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusCHESS_6MSN127.py to FormatCBFMiniPilatusCHESS_6MSN127.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI32.py to TemplatePYCXI32.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN.py to FormatSMVADSCSN.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN09040159.py to FormatSMVRigakuSaturnSN09040159.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatMultiImageLazy.py to FormatMultiImageLazy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI7d.py to TemplatePYCXI7d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPY.py to FormatPY.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSER.py to FormatSER.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerED1.py to FormatBrukerED1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5SaclaRayonix.py to FormatHDF5SaclaRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLSI19_2.py to FormatNXmxDLSI19_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFFullPilatusDLS6MSN126.py to FormatCBFFullPilatusDLS6MSN126.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVCMOS1.py to FormatSMVCMOS1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexusTimepix2M.py to FormatNexusTimepix2M.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusXXX.py to FormatCBFMiniPilatusXXX.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFBruker.py to FormatTIFFBruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFHelpers.py to FormatTIFFHelpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5.py to FormatHDF5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecifiedStill.py to FormatPYunspecifiedStill.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEiger.py to FormatCBFMiniEiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxEigerFilewriterESRFID232.py to FormatNXmxEigerFilewriterESRFID232.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYunspecified.py to FormatPYunspecified.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNoniusKappaCCD.py to FormatNoniusKappaCCD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCEpix.py to FormatXTCEpix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMini.py to FormatCBFMini.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXIS.py to FormatRAXIS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnNoTS.py to FormatSMVRigakuSaturnNoTS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturnSN11480296.py to FormatSMVRigakuSaturnSN11480296.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSNAPSID19.py to FormatSMVADSCSNAPSID19.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatBrukerFixedChi.py to FormatBrukerFixedChi.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN457.py to FormatSMVADSCSN457.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatXTCRayonix.py to FormatXTCRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNexus.py to FormatNexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatDIP2030b.py to FormatDIP2030b.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatPYmultitile.py to FormatPYmultitile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatHDF5PAL.py to FormatHDF5PAL.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuEiger.py to FormatSMVRigakuEiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixESRF.py to FormatTIFFRayonixESRF.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatus.py to FormatCBFMiniPilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN915.py to FormatSMVADSCSN915.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDLS6MSN114DMM.py to FormatCBFMiniPilatusDLS6MSN114DMM.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatEDFALS733.py to FormatEDFALS733.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatRAXISIVSpring8.py to FormatRAXISIVSpring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonixSPring8.py to FormatTIFFRayonixSPring8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVADSCSN442.py to FormatSMVADSCSN442.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatSMVRigakuSaturn.py to FormatSMVRigakuSaturn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniPilatusDESY6MSN115.py to FormatCBFMiniPilatusDESY6MSN115.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatCBFMiniEigerDLS16MSN160.py to FormatCBFMiniEigerDLS16MSN160.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/TemplatePYCXI31.py to TemplatePYCXI31.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatTIFFRayonix.py to FormatTIFFRayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatROD.py to FormatROD.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/format/FormatNXmxDLS.py to FormatNXmxDLS.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/load.py to load.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/filename.py to filename.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/xds.py to xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/serialize/imageset.py to imageset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/util/rotate_and_average.py to rotate_and_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/SmarGonShadowMask.py to SmarGonShadowMask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/masking/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/datablock.py to datablock.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/nexus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_2M_S_N_24_0107_Diamond.py to PILATUS_2M_S_N_24_0107_Diamond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/data/beamline_defs/PILATUS_300K_S_N_3_0104_Diamond.py to PILATUS_300K_S_N_3_0104_Diamond.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/sequence_filenames.py to sequence_filenames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/debug_memory.py to debug_memory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/radial_average.py to radial_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/install_format.py to install_format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_header.py to print_header.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/read_sequence.py to read_sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/any2nexus.py to any2nexus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/dlsnxs2cbf.py to dlsnxs2cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/overload.py to overload.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/depends_on.py to depends_on.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/saturation.py to saturation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_registry.py to show_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image_average.py to image_average.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_mask_info.py to show_mask_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/display_parallax_correction.py to display_parallax_correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/print_matching_images.py to print_matching_images.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/show_matching_formats.py to show_matching_formats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/plot_detector_models.py to plot_detector_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/image2pickle.py to image2pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/command_line/detector_superpose.py to detector_superpose.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/resolution_corners.py to resolution_corners.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/example/to_xds.py to to_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache_controller.py to filecache_controller.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/filecache.py to filecache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/goniometer.py to goniometer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/beam.py to beam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers.py to detector_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/profile.py to profile.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan_helpers.py to scan_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector.py to detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/tof_helpers.py to tof_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/crystal.py to crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/detector_helpers_types.py to detector_helpers_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/scan.py to scan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/compare.py to compare.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/model/experiment_list.py to experiment_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/imageset.py to imageset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx/flumpy.py to flumpy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/ring_frame.py to ring_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_viewer_image_factory.py to slip_viewer_image_factory.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/tile_generation.py to tile_generation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/score_frame.py to score_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/frame.py to frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/example_frame_plugin_hidden.py to example_frame_plugin_hidden.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/pyslip.py to pyslip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/uc_frame.py to uc_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/slip_viewer/slip_display.py to slip_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/spot_markup.py to spot_markup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/dual_resolution_helpers.py to dual_resolution_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/slip_helpers.py to slip_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/dials_refinement_preceding_integration.py to dials_refinement_preceding_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/simple_integration.py to simple_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/stills_integration.py to stills_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/apps/stills/deltapsi_refinement_preceding_integration.py to deltapsi_refinement_preceding_integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/sgtbx_adaptor.py to sgtbx_adaptor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/subgroup.py to subgroup.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/g_gradients.py to g_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/symmetry/constraints/parameter_reduction.py to parameter_reduction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/wx_display.py to wx_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/refine_uc_cr.py to refine_uc_cr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_labelit_index.py to run_labelit_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/run_spotfinder.py to run_spotfinder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/solver.py to solver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/integrate_crude.py to integrate_crude.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/explore_completeness.py to explore_completeness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simage/create.py to create.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/dataset.py to dataset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/pixels3d.py to pixels3d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/indexing.py to indexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/frame.py to frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_wrap.py to spotfinder_wrap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/integration.py to integration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration.py to calibration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/results_base.py to results_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/display.py to display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/spotfinder_frame.py to spotfinder_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/calibration_frame.py to calibration_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/drivers.py to drivers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/processing.py to processing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/viewer/controls.py to controls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/simulated_annealing.py to simulated_annealing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bandpass/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.explore_completeness.py to simage.explore_completeness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.wx_display.py to simage.wx_display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/slip_viewer.py to slip_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.solver.py to simage.solver.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/simage.create.py to simage.create.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/example_viewer.py to example_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/command_line/viewer.py to viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/detectors/silicon.py to silicon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dials_core/integration_core.py to integration_core.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_helpers.py to coordinate_frame_helpers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/tst_coordinate_frame_converter.py to tst_coordinate_frame_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/coordinate_frame_converter.py to coordinate_frame_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/cftbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/tst_xfel1_simple.py to tst_xfel1_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_utils.py to sim_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/simulation/sim_pdf.py to sim_pdf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/sampling.py to sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/force_cell.py to force_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_procedure.py to outlier_procedure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/outlier_detection.py to outlier_detection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/nearest_neighbor.py to nearest_neighbor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/lattice.py to lattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/test_dps.py to test_dps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing_api/tools.py to tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/phil_preferences.py to phil_preferences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/scope.py to scope.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/phil/preferences.py to preferences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/stats_index.py to stats_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/pixel_spread.py to pixel_spread.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/oscillation_shots.py to oscillation_shots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/spot_shape.py to spot_shape.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/new_horizons/speckfinder.py to speckfinder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/basis_choice.py to basis_choice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/sampling.py to sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/lepage.py to lepage.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/cell_assessment.py to cell_assessment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/constrainment.py to constrainment.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/zuoreduction.py to zuoreduction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/dps_core/tst_iotbx_converter.py to tst_iotbx_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/tst_sublattice.py to tst_sublattice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/sublattice_support/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_auto_monoscan.py to tst_auto_monoscan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/tst_dataset1.py to tst_dataset1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/indexing/do_index.py to do_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions_idx.py to uc1_2_positions_idx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/ersatz_misset.py to ersatz_misset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/instrument_specifics.py to instrument_specifics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/tst_detector_model.py to tst_detector_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/detector.py to detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/detector_model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2a.py to uc1_2a.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_validate.py to uc1_2_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2_positions.py to uc1_2_positions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/compare_mosflm_xds.py to compare_mosflm_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/bpcx/uc1_2.py to uc1_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_predict.py to tst_predict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_bragg_minimal.py to tst_bragg_minimal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/fastbragg/tst_utils_clustering.py to tst_utils_clustering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_ewald_sphere.py to tst_ewald_sphere.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/diffraction/tst_partial_derivatives.py to tst_partial_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/outlier_spots/fit_distribution.py to fit_distribution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/rstbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fast_linalg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_shoeboxes.py to tst_shoeboxes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_gpu_multisource_background.py to tst_gpu_multisource_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/gpu/tst_exafel_api.py to tst_exafel_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_utils.py to hopper_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/stage_two_utils.py to stage_two_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_io.py to hopper_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/attr_list.py to attr_list.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/parameters.py to parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/stage_two_refiner.py to stage_two_refiner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/monoclinic.py to monoclinic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/hexagonal.py to hexagonal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/orthorhombic.py to orthorhombic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/tetragonal.py to tetragonal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/crystal_systems/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/refiners/base_refiner.py to base_refiner.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/mpi_logger.py to mpi_logger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/parameter_errors.py to parameter_errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/ensemble_refine_launcher.py to ensemble_refine_launcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/psf.py to psf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/hopper_ensemble_utils.py to hopper_ensemble_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/device.py to device.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/diffBragg/prep_stage2_input.py to prep_stage2_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_pilatus.py to tst_nanoBragg_pilatus.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/sim_data.py to sim_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_multipanel.py to tst_nanoBragg_multipanel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/anisotropic_mosaicity.py to anisotropic_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_threads.py to nanoBragg_threads.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_cbf_write.py to tst_nanoBragg_cbf_write.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_input.py to nanoBragg_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity.py to tst_gaussian_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_mosaic.py to tst_nanoBragg_mosaic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gauss_argchk.py to tst_gauss_argchk.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_basic.py to tst_nanoBragg_basic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_multisource_background.py to tst_multisource_background.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_beam.py to nanoBragg_beam.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_nanoBragg_minimal.py to tst_nanoBragg_minimal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_init.py to nanoBragg_gui_init.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_frames.py to nanoBragg_gui_frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_anisotropic_mosaicity.py to tst_anisotropic_mosaicity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_crystal.py to nanoBragg_crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/nanoBragg_gui_dialogs.py to nanoBragg_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/nanoBragg/tst_gaussian_mosaicity2.py to tst_gaussian_mosaicity2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/kokkos/tst_kokkos_lib.py to tst_kokkos_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/FormatHDF5AttributeGeometry.py to FormatHDF5AttributeGeometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/forward_models.py to forward_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/modeling/predictions.py to predictions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/simtbx/pixel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/energy_scan_notch_finder.py to energy_scan_notch_finder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/construct_frame.py to construct_frame.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/time.py to time.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/max_like.py to max_like.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/mono_simulation/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/rayonix.py to rayonix.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/cspad.py to cspad.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/metrology.py to metrology.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/legacy_metrology/cspad_detector.py to cspad_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/xtc.py to xtc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/serialtbx/detector/jungfrau.py to jungfrau.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/qttbx/viewers/chimerax.py to chimerax.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/extract_from_symmetry_lib.py to extract_from_symmetry_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_miller_dict.py to tst_miller_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/crystal_symmetry_from_mtz.py to crystal_symmetry_from_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_extract_from_symmetry_lib.py to tst_extract_from_symmetry_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_unmerged.py to tst_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtz/tst_dano.py to tst_dano.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/fpfm_reader.py to fpfm_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/solve/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pymol.py to pymol.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/reflnlist_reader.py to reflnlist_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/crystal_symmetry_from_ref.py to crystal_symmetry_from_ref.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dtrek/dtrek_symmetry_dict.py to dtrek_symmetry_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_tools.py to map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif_mtz_data_labels.py to cif_mtz_data_labels.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ccp4_map/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/tables.py to tables.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/PrettyPrint/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/format.py to format.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/cod_tools.py to cod_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraints.py to restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/crystal_symmetry_from_cif.py to crystal_symmetry_from_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/builders.py to builders.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/citations.py to citations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/validation.py to validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cif/restraint_file_merge.py to restraint_file_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/merging_statistics.py to merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_miller_arrays.py to cif.as_miller_arrays.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_get_citation.py to pdb_get_citation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/patterson_map.py to patterson_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/xplor.map.show_summary.py to xplor.map.show_summary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/emma.py to emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/effective_resolution.py to effective_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_atoms_by_name.py to pdb.superpose_atoms_by_name.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_statistics.py to reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.insert_scale_records.py to pdb.insert_scale_records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.as_xray_structure.py to cif.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_cif_conversion.py to pdb_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.link_as_geometry_restraints_edits.py to pdb.link_as_geometry_restraints_edits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz.dump.py to mtz.dump.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.box_around_molecule.py to pdb.box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.superpose_centers_of_mass.py to pdb.superpose_centers_of_mass.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns_as_mtz.py to cns_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.dump_as_python.py to shelx.dump_as_python.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.reflection_reader.py to cns.reflection_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.hierarchy.py to pdb.hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_systematic_absences.py to show_systematic_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_completion_simple.py to r_free_flags_completion_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_xray_structure.py to shelx.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/poscar_as_xray_structure.py to poscar_as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/export_scalepack_unmerged.py to export_scalepack_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/csv_as_mtz.py to csv_as_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dano_as_amplitudes.py to dano_as_amplitudes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtz_as_cif.py to mtz_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.join_fragment_files.py to pdb.join_fragment_files.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/detector_image_as_png.py to detector_image_as_png.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif_as_pdb.py to cif_as_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/shelx.as_cif.py to shelx.as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/sort_atoms.py to sort_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/mtrix_reconstruction.py to mtrix_reconstruction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.print_sequence.py to pdb.print_sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/explore_metric_symmetry.py to explore_metric_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cbf_read.py to cbf_read.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_as_cns.py to r_free_flags_as_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reindex.py to reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_fasta.py to pdb_as_fasta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.b_factor_stats.py to pdb.b_factor_stats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/r_free_flags_accumulation.py to r_free_flags_accumulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/simple_map_coefficients.py to simple_map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cif.validate.py to cif.validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/biomt_reconstruction.py to biomt_reconstruction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/dtrek.to_cns.py to dtrek.to_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/blast_pdb.py to blast_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_add_conformations.py to pdb_add_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.transfer_crystal_symmetry.py to cns.transfer_crystal_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_remediator.py to pdb_remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_split_models.py to pdb_split_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_diff.py to pdb_labels_diff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_show_connectivity.py to pdb_show_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/get_pubmed_citation.py to get_pubmed_citation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/flip_symmetric_amino_acids.py to flip_symmetric_amino_acids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_labels_comparison.py to pdb_labels_comparison.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/show_distances.py to show_distances.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/file_reader.py to file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb_as_cif.py to pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/build_phil_cache.py to build_phil_cache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/pdb.as_xray_structure.py to pdb.as_xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/command_line/cns.sdb_reader.py to cns.sdb_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/box_around_molecule.py to box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/split_data_cif.py to split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/programs/unique_with_biomt.py to unique_with_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ncbi_blast_xml.py to ncbi_blast_xml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/xmlbuild.py to xmlbuild.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/homologues.py to homologues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/ebi_wu_blast_xml.py to ebi_wu_blast_xml.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/alignment_as_hsearch.py to alignment_as_hsearch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pubmed.py to pubmed.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/structure.py to structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/pdb_info.py to pdb_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/bioinformatics/local_blast.py to local_blast.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/bruker.py to bruker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/mar.py to mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/saturn.py to saturn.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/hamamatsu.py to hamamatsu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_cbf_comp_read_meth.py to tst_cbf_comp_read_meth.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis_nonsquare.py to raxis_nonsquare.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger.py to eiger.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_debug_write.py to tst_debug_write.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/dtrek.py to dtrek.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_adsc.py to tst_adsc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc.py to adsc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/util/filters.py to filters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/generic_detector.py to generic_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cbf.py to cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/marIP.py to marIP.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_minicbf.py to pilatus_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_py_cbf.py to tst_py_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/detectorbase.py to detectorbase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/macscience.py to macscience.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxis.py to raxis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_raxis2.py to test_raxis2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/active_area_filter.py to active_area_filter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/eiger_minicbf.py to eiger_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/raxisbase.py to raxisbase.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/test_mar.py to test_mar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_minicbf.py to adsc_minicbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/tst_detectors.py to tst_detectors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/pilatus_slice.py to pilatus_slice.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/camera_convention.py to camera_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation.py to endstation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/config_detector.py to config_detector.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/spot_xy_convention.py to spot_xy_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/context/endstation_max_iv_trial.py to endstation_max_iv_trial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/edf.py to edf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/url_support.py to url_support.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/noir.py to noir.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/adsc_module.py to adsc_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/beam_center_convention.py to beam_center_convention.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/npy.py to npy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/cspad_detector_formats.py to cspad_detector_formats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/detectors/image_from_http_request.py to image_from_http_request.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_plots.py to data_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/tst_xplormap.py to tst_xplormap.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xplor/crystal_symmetry_from_map.py to crystal_symmetry_from_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_no_merge_original_index.py to tst_no_merge_original_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/space_group_dictionary.py to space_group_dictionary.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/no_merge_original_index.py to no_merge_original_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/tst_merge.py to tst_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/scalepack/merge.py to merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_converter.py to reflection_file_converter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_model_manager.py to map_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/write_pcr.py to write_pcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/fullprof/read_pcr.py to read_pcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/extract_xtal_data.py to extract_xtal_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/tst_strudat.py to tst_strudat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/strudat.py to strudat.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/kriber/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/crystal_symmetry_from_ins.py to crystal_symmetry_from_ins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tokens.py to tokens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_fvar_encoding.py to tst_fvar_encoding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_lex_parse_build.py to tst_lex_parse_build.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fvar_encoding.py to fvar_encoding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_hklf.py to tst_hklf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/errors.py to errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/fcf.py to fcf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/parsers.py to parsers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/lexer.py to lexer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/hklf.py to hklf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/tst_writer.py to tst_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/writer.py to writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/shelx/write_ins.py to write_ins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/symmetry.py to symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders.py to builders.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_cbf.py to xds_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/read_ascii.py to read_ascii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/spot_xds.py to spot_xds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/crystal_symmetry_from_hkl.py to crystal_symmetry_from_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xparm.py to xparm.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/xds_inp.py to xds_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/gain_cbf.py to gain_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/blank_cbf.py to blank_cbf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/integrate_hkl.py to integrate_hkl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/xds/correction.py to correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ranges.py to ranges.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/poscar.py to poscar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_reader.py to reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_utils.py to reflection_file_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cli_parser.py to cli_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/logfiles.py to logfiles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/wildcard.py to wildcard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_utils.py to crystal_symmetry_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_sdb.py to crystal_symmetry_from_sdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/pdb_remarks.py to pdb_remarks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/miller_array.py to miller_array.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/space_group_symbols.py to space_group_symbols.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/reflection_reader.py to reflection_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/tst_cns.py to tst_cns.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/index_fobs_sigma_reader.py to index_fobs_sigma_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_writer.py to sdb_writer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/sdb_reader.py to sdb_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/cns/crystal_symmetry_from_inp.py to crystal_symmetry_from_inp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/dsn6/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/crystal_symmetry_from_any.py to crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/table_one.py to table_one.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/csv_utils.py to csv_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/phases.py to phases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/models.py to models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/reflections.py to reflections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/import_data_and_flags.py to import_data_and_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/gui_tools/cif_conversions.py to cif_conversions.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/builders_depending_on_smtbx.py to builders_depending_on_smtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mrcfile/crystal_symmetry_from_ccp4_map.py to crystal_symmetry_from_ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_id_str.py to tst_hierarchy_id_str.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_xray_scale.py to tst_xray_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_manager.py to tst_data_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_2.py to tst_map_model_manager_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_parser.py to tst_simple_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_simple_map_coefficients.py to tst_simple_map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_generate_n_char_string.py to tst_generate_n_char_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_show_systematic_absences.py to tst_show_systematic_absences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_half_map_sharpening_6.py to tst_map_model_manager_half_map_sharpening_6.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_merge_atoms_at_end_to_residues.py to tst_hierarchy_merge_atoms_at_end_to_residues.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_examples.py to tst_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_cif_inputs.py to tst_pdb_cif_inputs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_3.py to tst_hierarchy_long_resname_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_data_cif.py to tst_split_data_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_3.py to tst_map_model_manager_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager_wrapping.py to tst_map_manager_wrapping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_copy_select.py to tst_hierarchy_copy_select.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_occupancies_rounding.py to tst_hierarchy_occupancies_rounding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_tools.py to tst_map_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_altlocs.py to tst_hierarchy_altlocs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_2.py to tst_hierarchy_long_resname_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_4.py to tst_hierarchy_long_resname_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_selected_hierarchy_flip.py to tst_selected_hierarchy_flip.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_bioinformatics.py to tst_bioinformatics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_poscar.py to tst_poscar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_call_consistency.py to tst_map_model_manager_call_consistency.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_multimodel.py to tst_mmcif_multimodel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_cif.py to tst_pdb_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_local_resolution_10.py to tst_map_model_manager_local_resolution_10.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_all_chain_ids.py to tst_all_chain_ids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_group_rounding.py to tst_group_rounding.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5_cif.py to tst_map_model_manager_model_sharpening_5_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_add_conformations.py to tst_add_conformations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_export_scalepack_unmerged.py to tst_export_scalepack_unmerged.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_resname_1.py to tst_hierarchy_long_resname_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_external_sharpening_7.py to tst_map_model_manager_external_sharpening_7.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_merging_statistics.py to tst_merging_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_wildcard.py to tst_wildcard.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_manager.py to tst_map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_sort_atoms.py to tst_sort_atoms.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_reader.py to tst_reflection_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_atom_selections_10k.py to tst_atom_selections_10k.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_as_fasta.py to tst_pdb_as_fasta.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager.py to tst_map_model_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_lattice_symmetry.py to tst_lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_box_around_molecule.py to tst_box_around_molecule.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_tls_from_map_8.py to tst_map_model_manager_tls_from_map_8.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reindex.py to tst_reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_symmetry.py to tst_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phases.py to tst_phases.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_utils.py to tst_reflection_file_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_long_chain_ids_1.py to tst_hierarchy_long_chain_ids_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_4.py to tst_map_model_manager_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_csv_utils.py to tst_csv_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_split_models.py to tst_split_models.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_as_pdb_1atom.py to tst_cif_as_pdb_1atom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_file_reader.py to tst_file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdb_link_records.py to tst_pdb_link_records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_input.py to tst_mmcif_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cli_parser.py to tst_cli_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_to_from_hierarchy.py to tst_mmcif_to_from_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_pdbx_mmcif_tutorial.py to tst_pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mtz_as_cif.py to tst_mtz_as_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_pdb_v3.py to tst_hierarchy_pdb_v3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_crystal_symmetry_from_any.py to tst_crystal_symmetry_from_any.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_patterson.py to tst_patterson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_extract_xtal_data.py to tst_extract_xtal_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_fetch.py to tst_fetch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_cif.py to tst_map_model_manager_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_model_sharpening_5.py to tst_map_model_manager_model_sharpening_5.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_cif_1.py to tst_cif_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_miller_sort_asu.py to tst_miller_sort_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mmcif_segids.py to tst_mmcif_segids.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_shortcut_1.py to tst_ncs_search_shortcut_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_input.py to tst_ncs_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_user_selections.py to tst_ncs_user_selections.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_reordered_chains.py to tst_ncs_reordered_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_ligs.py to tst_ncs_search_ligs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_groups_preprocessing.py to tst_ncs_groups_preprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs.py to tst_ncs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_search_broken_chain.py to tst_ncs_search_broken_chain.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mmcif_biomt_reduction_output.py to tst_mmcif_biomt_reduction_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_ncs_without_validation.py to tst_ncs_without_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/ncs/tst_mtrix_biomt_cmdl.py to tst_mtrix_biomt_cmdl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_data_plots.py to tst_data_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_reflection_file_editor.py to tst_reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_hierarchy_forward_compatible_pdb.py to tst_hierarchy_forward_compatible_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_phil.py to tst_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_restraints_merge.py to tst_restraints_merge.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_mrc_io.py to tst_mrc_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/regression/tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.py to tst_map_model_manager_9_remove_origin_shift_and_unit_cell_crystal_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/direct_methods_light.py to direct_methods_light.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/shelx_latt_sym_to_space_group_symbol.py to shelx_latt_sym_to_space_group_symbol.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdbx_mmcif_tutorial.py to pdbx_mmcif_tutorial.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/libtbx_phil_examples.py to libtbx_phil_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_to_map_simple.py to pdb_to_map_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_convert_free_to_work.py to mtz_convert_free_to_work.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_shake.py to pdb_shake.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/tst_mtz_free_flipper.py to tst_mtz_free_flipper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/prepare_model_for_rsr.py to prepare_model_for_rsr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/mtz_free_flipper.py to mtz_free_flipper.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_hierarchy.py to pdb_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_split_chains.py to pdb_split_chains.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_tardy_conf_sampling_simple.py to pdb_tardy_conf_sampling_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/recalculate_phenix_refine_r_factors.py to recalculate_phenix_refine_r_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/examples/pdb_symmetry_copies.py to pdb_symmetry_copies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/file_reader.py to file_reader.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/option_parser.py to option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/download.py to download.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/amino_acid_codes.py to amino_acid_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_atom_sort.py to tst_hierarchy_atom_sort.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hierarchy.py to hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/fetch.py to fetch.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection.py to tst_atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_selection.py to atom_selection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/extract_rfactors_resolutions_sigma.py to extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdbe.py to pdbe.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_selection_string.py to tst_atom_selection_string.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_rna_dna_atom_names.py to tst_rna_dna_atom_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_aa_names.py to modified_aa_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_atom_name_interpretation.py to tst_atom_name_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_utils.py to tst_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/experiment_type.py to experiment_type.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/secondary_structure.py to secondary_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/pdb_v3_cif_conversion.py to pdb_v3_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/crystal_symmetry_from_pdb.py to crystal_symmetry_from_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/remediator.py to remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remediation/tst_remediator.py to tst_remediator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_pdb.py to tst_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py to utils.cpython-312.pyc /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:8: SyntaxWarning: invalid escape sequence '\{' /usr/lib/python3.12/dist-packages/iotbx/pdb/utils.py:46: SyntaxWarning: invalid escape sequence '\/' byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_read_mtrix_records_from_cif.py to tst_read_mtrix_records_from_cif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/nucleic_acid_codes.py to nucleic_acid_codes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_extract_rfactors_resolutions_sigma.py to tst_extract_rfactors_resolutions_sigma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/atom_name_interpretation.py to atom_name_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/misc_records_output.py to misc_records_output.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/forward_compatible_pdb_cif_conversion.py to forward_compatible_pdb_cif_conversion.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif.py to tst_mmcif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/records.py to records.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/modified_rna_dna_names.py to modified_rna_dna_names.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric.py to tst_hierarchy_flip_symmetric.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy_2.py to tst_mmcif_hierarchy_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_tls.py to tst_tls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/cryst1_interpretation.py to cryst1_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/aa_utils.py to aa_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_290_interpretation.py to remark_290_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/xray_structure.py to xray_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/mmcif.py to mmcif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure.py to tst_secondary_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_3_interpretation.py to remark_3_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy.py to tst_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_hierarchy_flip_symmetric_2.py to tst_hierarchy_flip_symmetric_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/web_service_api.py to web_service_api.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_mmcif_hierarchy.py to tst_mmcif_hierarchy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/tst_secondary_structure_2.py to tst_secondary_structure_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/remark_2_interpretation.py to remark_2_interpretation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rcsb.py to rcsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/rna_dna_detection.py to rna_dna_detection.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/pdb/hybrid_36.py to hybrid_36.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/mtrix_biomt.py to mtrix_biomt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/simple_parser.py to simple_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/common.py to common.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/real_map.py to real_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/restraint.py to restraint.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/phil.py to phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/miller_array.py to miller_array.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/model.py to model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/map_coefficients.py to map_coefficients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/ncs_spec.py to ncs_spec.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/data_manager/sequence.py to sequence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/ncs/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/reflection_file_editor.py to reflection_file_editor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/iotbx/map_manager.py to map_manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/mod_isoform_cluster.py to mod_isoform_cluster.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/isoform_cluster/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/explore_twin_operators.py to explore_twin_operators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plot_energy_spectrum.py to plot_energy_spectrum.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/compare_solution_pickles.py to compare_solution_pickles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_scale.py to mpi_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/r_mtz_mtz.py to r_mtz_mtz.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/frame_extractor_by_scan.py to frame_extractor_by_scan.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/iotacc.py to iotacc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/comparestats.py to comparestats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/print_integration_pickle.py to print_integration_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/view_fineslices.py to view_fineslices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/solve_indexing_ambiguity.py to solve_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/run.py to run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/change_path_indexing_ambiguity.py to change_path_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/plotstats.py to plotstats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/cluster_isoform.py to cluster_isoform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/viewstats.py to viewstats.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/spot_param_visualizer.py to spot_param_visualizer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/ray_trace.py to ray_trace.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/prime_gui.py to prime_gui.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/command_line/mpi_run.py to mpi_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_indexing_ambiguity.py to mod_indexing_ambiguity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/index_ambiguity/mod_kmeans.py to mod_kmeans.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_misc.py to mod_misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_frames.py to mod_gui_frames.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_input.py to mod_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_perf.py to mod_perf.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_partiality.py to mod_partiality.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/postrefine.py to postrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_util.py to mod_util.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_threads.py to mod_threads.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_pdb.py to mod_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_merge_data.py to mod_merge_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs_partiality.py to mod_lbfgs_partiality.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_plotter.py to mod_plotter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_lbfgs.py to mod_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_run.py to mod_run.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_results.py to mod_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_gui_dialogs.py to mod_gui_dialogs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_leastsqr.py to mod_leastsqr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_mx.py to mod_mx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/prime/postrefine/mod_outlier.py to mod_outlier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/tst.py to tst.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/omptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/multipolar.py to multipolar.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/bfgs.py to bfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/pdb_dev.py to pdb_dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_bfgs.py to tst_bfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tardy_adaptor.py to tardy_adaptor.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/dev.py to dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/tst_dev.py to tst_dev.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/eval_iso_vs_refined.py to eval_iso_vs_refined.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cif_refine.py to cif_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/omz/cod_refine.py to cod_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/dmtbx.py to dmtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/show_cosets.py to show_cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/plane_groups.py to plane_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/subgroups.py to subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/bravais_types.py to bravais_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/short_cuts.py to short_cuts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/tst_asu.py to tst_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/generate_cpp_asu_table.py to generate_cpp_asu_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/proto/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/reference_table.py to reference_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/plane_group_reference_table.py to plane_group_reference_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/facet_analysis.py to facet_analysis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/check_redundancies.py to check_redundancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/direct_space_asu/cut_plane.py to cut_plane.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/rational_matrices_point_groups.py to rational_matrices_point_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_pg_tools.py to reticular_pg_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/reticular_twin_laws.py to reticular_twin_laws.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sub_lattice_tools.py to sub_lattice_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/sys_abs_equiv.py to sys_abs_equiv.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/symbol_confidence.py to symbol_confidence.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/literal_description.py to literal_description.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/harker.py to harker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/cosets.py to cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/sgtbx/pointgroup_tools.py to pointgroup_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_distance_based_connectivity.py to tst_distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/direct_space_asu.py to direct_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/super_cell.py to super_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/tst_super_cell.py to tst_super_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/close_packing.py to close_packing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/find_best_cell.py to find_best_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/reindex.py to reindex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/burzlaff_zimmermann_dewolff.py to burzlaff_zimmermann_dewolff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal/coordination_sequences.py to coordination_sequences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_reindexing.py to tst_reindexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/display.py to display.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/reindexing.py to reindexing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/miller/tst_map_to_asu_isym.py to tst_map_to_asu_isym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_examples.py to run_examples.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/chemical_elements.py to chemical_elements.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/sasaki.py to sasaki.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/read_custom_scattering_dict.py to read_custom_scattering_dict.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/attenuation_coefficient.py to attenuation_coefficient.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/e_scattering.py to e_scattering.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/distance_based_connectivity.py to distance_based_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/gaussian_fit.py to gaussian_fit.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/tiny_pse.py to tiny_pse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/fp_fdp.py to fp_fdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/formula.py to formula.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/neutron.py to neutron.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/van_der_waals_radii.py to van_der_waals_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/wavelengths.py to wavelengths.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_cross_validation.py to itvc_cross_validation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_fits.py to kissel_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/hydrogen_plots.py to hydrogen_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/format_gaussian_fits.py to format_gaussian_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/combine_fits.py to combine_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_approx.py to itvc_approx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_fits.py to itvc_fits.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_kissel.py to itvc_kissel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/itvc_section61_io.py to itvc_section61_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/create_n_gaussian_raw_cpp.py to create_n_gaussian_raw_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/e_scattering_plots.py to e_scattering_plots.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/rez_rez_grant.py to rez_rez_grant.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/development/kissel_io.py to kissel_io.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/xray_scattering/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/icsd_radii.py to icsd_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/covalent_radii.py to covalent_radii.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/eltbx/henke.py to henke.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cod_select_and_pickle.py to cod_select_and_pickle.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/precession_view.py to precession_view.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_join.py to samosa_join.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/wavelength_units.py to wavelength_units.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/subgroups.py to subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/structure_factor_timings.py to structure_factor_timings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/find_reticular_twin_laws.py to find_reticular_twin_laws.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/form_factor_query.py to form_factor_query.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/diffuse.py to diffuse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/samosa_scale.py to samosa_scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/cctbx_test_nightly.py to cctbx_test_nightly.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/space_group_info.py to space_group_info.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/eltbx.show_fp_fdp.py to eltbx.show_fp_fdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/command_line/qscore.py to qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/map_symmetry.py to map_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_sharpening.py to refine_sharpening.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_curves.py to tst_atom_curves.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation.py to tst_interpolation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_resolution_from_map_and_model.py to tst_resolution_from_map_and_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/real_space_refinement_simple.py to real_space_refinement_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/segment_and_split_map.py to segment_and_split_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mem.py to mem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/auto_sharpen.py to auto_sharpen.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_peak_volume_estimate.py to tst_peak_volume_estimate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_real_space_refinement_simple.py to tst_real_space_refinement_simple.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_interpolation_2.py to tst_interpolation_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/box.py to box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/refine_scales_errors.py to refine_scales_errors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_atom_radius_as_central_peak_width.py to tst_atom_radius_as_central_peak_width.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_map_peak_3d_as_2d.py to tst_map_peak_3d_as_2d.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_loft.py to tst_loft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_qscore.py to tst_qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_mask.py to tst_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_get_percentile_cutoffs.py to tst_get_percentile_cutoffs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/mask.py to mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/qscore.py to qscore.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/prepare_map_for_docking.py to prepare_map_for_docking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_bcr.py to tst_bcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_ccp.py to tst_ccp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_asymmetric_map.py to tst_asymmetric_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/tst_target_and_gradients.py to tst_target_and_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/bcr.py to bcr.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/bcr/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/maptbx/resolution_from_map_and_model.py to resolution_from_map_and_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors_pdb.py to structure_factors_pdb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/wyckoff.py to wyckoff.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/emma.py to emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_hand.py to change_hand.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_basis.py to change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_asu.py to jv_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/guide_to_notation.py to guide_to_notation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/web_links.py to web_links.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jvx.py to jvx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/asu_gallery/jv_index.py to jv_index.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/all_axes.py to all_axes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/multiple_cell.py to multiple_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/lattice_symmetry.py to lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/cgi_utils.py to cgi_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/explore_symmetry.py to explore_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/replay.py to replay.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/libtbx_help.py to libtbx_help.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/dispatcher.py to dispatcher.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/io_utils.py to io_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/frac_cart.py to frac_cart.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/structure_factors.py to structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/iotbx_cif_validate.py to iotbx_cif_validate.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/change_setting.py to change_setting.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/shelx.py to shelx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/web/browse_settings.py to browse_settings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/flags.py to flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adp_restraints/energies.py to energies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/anharmonic.py to anharmonic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/french_wilson.py to french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/euclidean_model_matching.py to euclidean_model_matching.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/scatterer.py to scatterer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observation_types.py to observation_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_shelxl_wght_ls.py to tst_shelxl_wght_ls.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/r1.py to r1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/targets/tst_r1.py to tst_r1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/minimization.py to minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/ext.py to ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/target_functors.py to target_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct_parallel.py to from_scatterers_direct_parallel.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/misc.py to misc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradient_flags.py to gradient_flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_direct.py to from_scatterers_direct.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers_fft.py to from_scatterers_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_base.py to gradients_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_fft.py to gradients_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/from_scatterers.py to from_scatterers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/global_counters.py to global_counters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients_direct.py to gradients_direct.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure_factors/gradients.py to gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/structure.py to structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/tst_observations.py to tst_observations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/xray/observations/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/crystal_orientation.py to crystal_orientation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/macro_mol/rotation_parameters.py to rotation_parameters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/math_module.py to math_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/translation_search.py to translation_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/covariance/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/krivy_gruber_1976.py to krivy_gruber_1976.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973.py to gruber_1973.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/reduction_base.py to reduction_base.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/determine_unit_cell/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/uctbx/gruber_1973_table_1.py to gruber_1973_table_1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/neutron/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller.py to tst_miller.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_refine_xray_curvs.py to tst_refine_xray_curvs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_harker.py to tst_sgtbx_harker.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fast_nv1995.py to tst_fast_nv1995.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal.py to tst_crystal.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_is_periodic.py to tst_map_is_periodic.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sphericity.py to tst_sphericity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_pickling.py to tst_grm_pickling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_denominators.py to tst_sgtbx_denominators.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_statistics.py to tst_miller_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_fft_map.py to tst_miller_fft_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints.py to tst_geometry_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_fast_gradients.py to tst_xray_fast_gradients.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_data_manipulation.py to tst_miller_data_manipulation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pointgroup_tools.py to tst_pointgroup_tools.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_lattice_symmetry.py to tst_sgtbx_lattice_symmetry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_merge_equivalents.py to tst_miller_merge_equivalents.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_2.py to tst_geometry_restraints_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_find_best_cell.py to tst_find_best_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray.py to tst_xray.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_space_asu.py to tst_direct_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization_failure.py to tst_xray_minimization_failure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sf_low_res_accuracy.py to tst_sf_low_res_accuracy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grm_modifications.py to tst_grm_modifications.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_weighting_schemes.py to tst_weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sampled_model_density.py to tst_sampled_model_density.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_mask.py to tst_maptbx_mask.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_expand_to_p1.py to tst_expand_to_p1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_web_change_basis.py to tst_web_change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_double_step_filtration.py to tst_miller_double_step_filtration.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_minimization.py to tst_xray_minimization.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_f_model.py to tst_f_model.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_box.py to tst_maptbx_box.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints.py to tst_adp_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reflection_statistics.py to tst_reflection_statistics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_amplitude_normalisation.py to tst_amplitude_normalisation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_subgroups.py to tst_sgtbx_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wavelength_units.py to tst_wavelength_units.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_math_module.py to tst_math_module.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx.py to tst_sgtbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_show_cosets.py to tst_show_cosets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_krivy_gruber.py to tst_krivy_gruber.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_direct_scaling.py to tst_direct_scaling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_coordination_sequences.py to tst_coordination_sequences.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity.py to tst_connectivity.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_statistics_graphs.py to tst_statistics_graphs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fcalc_fft_stability.py to tst_fcalc_fft_stability.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_french_wilson.py to tst_french_wilson.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_diffuse.py to tst_diffuse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_connectivity_allsym.py to tst_connectivity_allsym.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_fourier_transform_real_part_at_x.py to tst_fourier_transform_real_part_at_x.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_pair_asu_table.py to tst_pair_asu_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_geometry_restraints_lbfgs.py to tst_geometry_restraints_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_close_packing.py to tst_crystal_close_packing.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_site_constraints.py to tst_sgtbx_site_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_itvb_2001_table_a1427_hall_symbols.py to tst_itvb_2001_table_a1427_hall_symbols.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_map_weights_for_symmetry_summation.py to tst_map_weights_for_symmetry_summation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_special_op_simplifier.py to tst_sgtbx_special_op_simplifier.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_maptbx_structure_factors.py to tst_maptbx_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_emma.py to tst_emma.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_create_models_or_maps.py to tst_create_models_or_maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_twin_target.py to tst_twin_target.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_aniso_restraints.py to tst_adp_aniso_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem.py to tst_mem.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_sgtbx_tidy_pickling.py to tst_sgtbx_tidy_pickling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_prepare_map_for_docking.py to tst_prepare_map_for_docking.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_mem_2.py to tst_mem_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_reciprocal_space_asu.py to tst_reciprocal_space_asu.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_miller_lookup_utils.py to tst_miller_lookup_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_adp_constraints_cartesian.py to tst_adp_constraints_cartesian.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_loc_res.py to tst_loc_res.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_grouped_data.py to tst_grouped_data.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_target_functors.py to tst_xray_target_functors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_r_free_utils.py to tst_r_free_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_space_group_type_tidy_cb_op_t.py to tst_space_group_type_tidy_cb_op_t.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_wilson_plot.py to tst_wilson_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_crystal_asu_clusters.py to tst_crystal_asu_clusters.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_triplet_generator.py to tst_triplet_generator.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_xray_derivatives.py to tst_xray_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/regression/tst_change_basis.py to tst_change_basis.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_constraints.py to site_symmetry_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_f_calc.py to random_f_calc.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/quartz_structure.py to quartz_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_phase_o_phrenia.py to tst_phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_derivatives.py to sites_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/sites_least_squares_derivatives.py to sites_least_squares_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/site_derivatives.py to site_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_calculus/u_star_derivatives.py to u_star_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/lebedev_2005_perturbation.py to lebedev_2005_perturbation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_sys_abs_equiv_space_groups.py to find_sys_abs_equiv_space_groups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_refinement.py to unit_cell_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/reduced_cell_two_folds.py to reduced_cell_two_folds.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_4.py to structure_factor_derivatives_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_exp_i_alpha_derivatives.py to tst_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/getting_started.py to getting_started.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives.py to tst_structure_factor_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_transform.py to miller_transform.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_consistency_checks.py to cr2o3_consistency_checks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/adp_symmetry_constraints.py to adp_symmetry_constraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_3.py to structure_factor_derivatives_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/sub_group_graph.py to sub_group_graph.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_partial_derivatives.py to g_exp_i_partial_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/neutron_structure_factors.py to neutron_structure_factors.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives_2.py to structure_factor_derivatives_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/structure_factor_derivatives.py to structure_factor_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_3.py to tst_structure_factor_derivatives_3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/random_puckers.py to random_puckers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/f_model_example.py to f_model_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/all_axes.py to all_axes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/convert_ccp4_symop_lib.py to convert_ccp4_symop_lib.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/ccp4_map.py to ccp4_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/change_hand_p31.py to change_hand_p31.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/trigonal_r_vs_tetragonal_i.py to trigonal_r_vs_tetragonal_i.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_space_subgroups.py to tst_space_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/le_page_1982_vs_lebedev_2005.py to le_page_1982_vs_lebedev_2005.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_subgroups.py to space_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/hirshfeld_test.py to hirshfeld_test.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/unit_cell_minimizers.py to unit_cell_minimizers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/space_group_matrices.py to space_group_matrices.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/analyze_adp.py to analyze_adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/find_distances_using_cpp_objects.py to find_distances_using_cpp_objects.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/list_non_principal_continuous_shifts.py to list_non_principal_continuous_shifts.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/miller_common_sets.py to miller_common_sets.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/phase_o_phrenia.py to phase_o_phrenia.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/g_exp_i_alpha_derivatives.py to g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/location_part.py to location_part.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/steve_collins.py to steve_collins.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_4.py to tst_structure_factor_derivatives_4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/exp_i_alpha_derivatives.py to exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_structure_factor_derivatives_2.py to tst_structure_factor_derivatives_2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/site_symmetry_table.py to site_symmetry_table.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_cc_half.py to test_cc_half.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_utilities.py to data_utilities.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/tst_permutations.py to tst_permutations.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/show_results.py to show_results.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test_levenberg_sparse.py to test_levenberg_sparse.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/data_subset.py to data_subset.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/task4.py to task4.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/sigma_correction.py to sigma_correction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/per_lattice_postrefinement.py to per_lattice_postrefinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/scale.py to scale.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/samosa/join.py to join.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/merging/test1.py to test1.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/map_skewness.py to map_skewness.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/view_fft_map.py to view_fft_map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/symops_530.py to symops_530.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/fft_map_electron_density_around_atom.py to fft_map_electron_density_around_atom.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/cr2o3_primitive_cell.py to cr2o3_primitive_cell.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/tst_g_exp_i_alpha_derivatives.py to tst_g_exp_i_alpha_derivatives.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/examples/maximum_subgroups.py to maximum_subgroups.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/brehm_diederichs.py to brehm_diederichs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/merging/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/direct_or_fft.py to direct_or_fft.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx.py to run_shelx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_settings.py to make_settings.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/space_group_option_parser.py to space_group_option_parser.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/random_structure.py to random_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/github.py to github.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/cns_density_modification.py to cns_density_modification.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/electron_density_sampling.py to electron_density_sampling.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/debug_utils.py to debug_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/run_shelx76.py to run_shelx76.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/make_cns_input.py to make_cns_input.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/create_models_or_maps.py to create_models_or_maps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/structure_factor_utils.py to structure_factor_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/fmt_utils.py to fmt_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/approx_amplitude_vs_resolution.py to approx_amplitude_vs_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_epsilon.py to tst_cns_epsilon.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/development/tst_cns_hl.py to tst_cns_hl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/symmetry_search.py to symmetry_search.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/adptbx.py to adptbx.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_sasaki_cpp.py to generate_sasaki_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/eltbx/generate_henke_cpp.py to generate_henke_cpp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/process_nonbonded_proxies.py to process_nonbonded_proxies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_process_nonbonded_proxies.py to tst_process_nonbonded_proxies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_nonbonded_overlaps.py to tst_nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/base_geometry.py to base_geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/flags.py to flags.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_proxy_registry.py to tst_proxy_registry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/lbfgs.py to lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/nonbonded_overlaps.py to nonbonded_overlaps.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/distance_least_squares.py to distance_least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/standard_cif_links.py to standard_cif_links.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/linking_class.py to linking_class.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_motif.py to tst_motif.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/tst_angle_derivs.py to tst_angle_derivs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/manager.py to manager.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/auto_linking_types.py to auto_linking_types.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/geometry_restraints/energies.py to energies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/cctbx/r_free_utils.py to r_free_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/wrappers.py to wrappers.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_phil.py to cxi_phil.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/cxi_run3.py to cxi_run3.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/xfel/correction_vector_plot.py to correction_vector_plot.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/stats_distl.py to stats_distl.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice2.py to ice2.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/method2_resolution.py to method2_resolution.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/spotreporter.py to spotreporter.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/applications/heuristic_tbx/ice_nztt.py to ice_nztt.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/close_spots_detail.py to close_spots_detail.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/core_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/sweep_strength.py to sweep_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/image_viewer.py to image_viewer.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/find_active_area.py to find_active_area.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/signal_strength.py to signal_strength.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/command_line/thin_client.py to thin_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_client_push.py to spotfinder_server_client_push.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/multipart_encoder.py to multipart_encoder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/adsc_client.py to adsc_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_dials.py to apache_dials.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_utils.py to apache_utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/specific_client_example.py to specific_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_read_file.py to mp_spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache_bcsb.py to apache_bcsb.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/mp_spotfinder_server_is_alive.py to mp_spotfinder_server_is_alive.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/apache.py to apache.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/bcsb_client_example.py to bcsb_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/thin_client.py to thin_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/pilatus_client.py to pilatus_client.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/spotfinder_server_read_file.py to spotfinder_server_read_file.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/servers/general_client_example.py to general_client_example.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/practical_heuristics.py to practical_heuristics.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/dxtbx_toolbox/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/imagefiles.py to imagefiles.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/geometry.py to geometry.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/diffraction/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/array_family/flex.py to flex.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/exception.py to exception.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/spotfinder/math_support/sphere_formulae.py to sphere_formulae.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/masks/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/adp_restraints.py to adp_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/restraints/origin_fixing_restraints.py to origin_fixing_restraints.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/weighting_schemes.py to weighting_schemes.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/least_squares.py to least_squares.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/rigid.py to rigid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/all.py to all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_reparametrisation.py to tst_reparametrisation.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_disorder.py to test_disorder.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_direction.py to test_direction.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_occupancies.py to test_occupancies.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_constrained_structure.py to tst_constrained_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/tst_lbfgs.py to tst_lbfgs.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_rigid.py to test_rigid.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/tests/test_same_group.py to test_same_group.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/all.py to all.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/hydrogens.py to hydrogens.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/geometrical/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/adp.py to adp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/fpfdp.py to fpfdp.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/refinement/constraints/site.py to site.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/map.py to map.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/stl/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/utils.py to utils.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/masks.py to masks.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/anom_refine.py to anom_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/refine.py to refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/absolute_structure.py to absolute_structure.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/command_line/benchmark_refinement.py to benchmark_refinement.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_ab_initio_ext.py to tst_ab_initio_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/tests/tst_charge_flipping.py to tst_charge_flipping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/charge_flipping.py to charge_flipping.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/ab_initio/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/run_tests.py to run_tests.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/absolute_structure/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/structure_factors/direct/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/array_family/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/test_data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_refine.py to tst_commandline_refine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/regression/tst_commandline_anomrefine.py to tst_commandline_anomrefine.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/conftest.py to conftest.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/flex_fwd_h.py to flex_fwd_h.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/source_generators/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/smtbx/development.py to development.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/tst_ext.py to tst_ext.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/fftw3tbx/libtbx_refresh.py to libtbx_refresh.cpython-312.pyc running install_egg_info running egg_info writing src/dxtbx.egg-info/PKG-INFO writing dependency_links to src/dxtbx.egg-info/dependency_links.txt writing entry points to src/dxtbx.egg-info/entry_points.txt writing top-level names to src/dxtbx.egg-info/top_level.txt reading manifest file 'src/dxtbx.egg-info/SOURCES.txt' adding license file 'LICENSE.txt' adding license file 'AUTHORS' writing manifest file 'src/dxtbx.egg-info/SOURCES.txt' Copying src/dxtbx.egg-info to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/python3.12/dist-packages/dxtbx-3.21.1.egg-info Skipping SOURCES.txt running install_scripts Installing cxi.image2pickle script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing cxi.image_average script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dev.dxtbx.debug_memory script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dev.dxtbx.read_sequence script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.any2nexus script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.depends_on script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.detector_superpose script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.display_parallax_correction script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.dlsnxs2cbf script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.image2pickle script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.image_average script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.install_format script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.overload script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.plot_detector_models script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.print_header script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.print_matching_images script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.radial_average script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.saturation script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.show_mask_info script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.show_matching_formats script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin Installing dxtbx.show_registry script to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/bin # specific installation for the cctbx build directory dh_auto_install -- -s custom --install-args="debian/install-cctbx.sh -- --pyver={version} --srcdir=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" install -m0755 -d /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp pybuild --install -i python{version} -p 3.12 -s custom "--install-args=debian/install-cctbx.sh -- --pyver={version} --srcdir=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 --builddir={build_dir}_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx'" --dest-dir /build/reproducible-path/cctbx-2024.8\+ds2\+\~3.21.1\+ds1/debian/tmp I: pybuild base:311: debian/install-cctbx.sh -- --pyver=3.12 --srcdir=/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 --builddir='/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build'_ --modules='annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' debian/install-cctbx.sh: line 7: 0: command not found --pyver '3.12' --srcdir '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' --builddir '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_' --modules 'annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx' -- Intalling CCTBX into a FHS system Modules: annlib_adaptbx boost_adaptbx cbflib_adaptbx ccp4io_adaptbx cctbx cma_es crys3d dxtbx fable gltbx iotbx libtbx mmtbx omptbx rstbx scitbx serialtbx smtbx spotfinder tbxx wxtbx From the source /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1 build /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_ To the FHS : pyver 3.12 bindir /usr/bin incdir /usr/include pkglibdir /usr/lib/cctbx/python3.12 libdir /usr/lib/x86_64-linux-gnu pythondir /usr/lib/python3.12/dist-packages Copying libtbx_env from /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_ to /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12 {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/serialtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/wxtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/boost.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/omptbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cma_es.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/fable.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/scitbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/annlib.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cbflib.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/ccp4io.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.show_build_path"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/show_build_path.py"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", 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relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/ccp4io.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/cctbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/crys3d.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/smtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/iotbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/dxtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/gltbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/mmtbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/spotfinder.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin/rstbx.python"): relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12")}, 'bin_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="bin"), 'boost_version': 108300, 'build_options': , 'build_path': absolute_path("/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12"), 'command_line_redirections': {}, 'command_version_suffix': None, 'dispatcher_name': None, 'exe_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="exe"), 'explicitly_requested_modules': {'annlib', 'annlib_adaptbx', 'boost_adaptbx', 'cbflib_adaptbx', 'ccp4io', 'ccp4io_adaptbx', 'cctbx', 'cma_es', 'crys3d', 'dxtbx', 'fable', 'gltbx', 'iotbx', 'libtbx', 'mmtbx', 'omptbx', 'rstbx', 'scitbx', 'serialtbx', 'smtbx', 'spotfinder', 'tbxx', 'wxtbx'}, 'full_testing': False, 'include_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="include"), 'installed': False, 'installed_modules': [], 'installed_order': [], 'lib_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="lib"), 'missing_for_build': set(), 'missing_for_use': set(), 'missing_optional': {'king', 'reduce', 'docutils', 'probe', 'cbflib'}, 'module_dict': {'annlib': , 'boost': , 'cbflib': , 'ccp4io': , 'cctbx': , 'chiltbx': , 'cma_es': , 'crys3d': , 'dxtbx': , 'fable': , 'gltbx': , 'iotbx': , 'libtbx': , 'mmtbx': , 'omptbx': , 'rstbx': , 'scitbx': , 'serialtbx': , 'smtbx': , 'spotfinder': , 'tbxx': , 'ucif': , 'wxtbx': }, 'module_dist_paths': {'annlib': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../annlib"), 'annlib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../annlib_adaptbx"), 'boost': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost"), 'boost_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cctbx"), 'chiltbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../chiltbx"), 'cma_es': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../cma_es"), 'crys3d': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../crys3d"), 'dxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx"), 'fable': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../fable"), 'gltbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../gltbx"), 'iotbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../iotbx"), 'libtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx"), 'mmtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../mmtbx"), 'omptbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../omptbx"), 'rstbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../rstbx"), 'scitbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../scitbx"), 'serialtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../serialtbx"), 'smtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../smtbx"), 'spotfinder': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../spotfinder"), 'tbxx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../tbxx"), 'ucif': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../ucif"), 'wxtbx': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': False, 'path_utility': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/bin/python3.12"), 'python_version_major_minor': (3, 12), 'pythonpath': [relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/.pybuild/cpython3_3.12/build_", relocatable="../../../dxtbx/src"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../.."), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../dxtbx/src"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../../boost_adaptbx"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="lib"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/lib/python3.12/dist-packages"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/lib/python3/dist-packages"), relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr/local/lib/python3.12/dist-packages")], 'relocatable': True, 'repository_paths': [relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="../../..")], 'scons_dist_path': relocatable_path(anchor="/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12", relocatable="/usr")} Saved /build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1/debian/tmp/usr/lib/cctbx/python3.12/libtbx_env env {'_dispatcher_include_at_start': [], '_dispatcher_include_before_command': [], '_dispatcher_precall_commands': None, '_dispatcher_registry': {relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.solver"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.solver.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.explore_completeness"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.explore_completeness.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.mp_spotfinder_server_read_file"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/mp_spotfinder_server_read_file.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.bfactor_plot"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/b_plot.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.wx_display"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.wx_display.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/slip_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/image_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.xtriage_gui"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/xtriage.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.signal_strength"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/signal_strength.py"), relocatable_path(anchor="/usr", relocatable="bin/distl.sweep_strength"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder/command_line/sweep_strength.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.inspect_r_free_flags"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/inspect_r_free_flags.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.plot_anomalous_scattering"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/plot_anomalous_scattering.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.show_r_factors_by_shell"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/show_r_factors_by_shell.py"), relocatable_path(anchor="/usr", relocatable="bin/mmtbx.pdb_statistics"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/pdb_statistics.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.index"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/index.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.xtriage"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/xtriage.py"), relocatable_path(anchor="/usr", relocatable="bin/rstbx.simage.create"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/simage.create.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.example_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/example_viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.image_viewer"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx/command_line/viewer.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.show_file_info"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/show_file_info.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.wxpython"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/wxpython.py"), relocatable_path(anchor="/usr", relocatable="bin/cctbx.loggraph"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/loggraph.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_editor"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/pdb_editor.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.plan_sad_experiment"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/plan_sad_experiment.py"), relocatable_path(anchor="/usr", relocatable="bin/wxtbx.anomalous_differences_histogram"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx/command_line/anomalous_differences_histogram.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_interpretation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/pdb_interpretation.py"), relocatable_path(anchor="/usr", relocatable="bin/phenix.pdb_atom_selection"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx/command_line/pdb_atom_selection.py"), relocatable_path(anchor="/usr", 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relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/image_average.py"), relocatable_path(anchor="/usr", relocatable="bin/dev.dxtbx.debug_memory"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/debug_memory.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.depends_on"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/depends_on.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.saturation"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/saturation.py"), relocatable_path(anchor="/usr", relocatable="bin/dev.dxtbx.read_sequence"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/read_sequence.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.overload"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/overload.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.show_registry"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/show_registry.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.radial_average"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/radial_average.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.install_format"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/install_format.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.print_header"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/print_header.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.any2nexus"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/any2nexus.py"), relocatable_path(anchor="/usr", relocatable="bin/dxtbx.dlsnxs2cbf"): relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx/src/dxtbx/command_line/dlsnxs2cbf.py")}, 'bin_path': relocatable_path(anchor="/usr", relocatable="bin"), 'boost_version': 108300, 'build_options': , 'build_path': absolute_path("/usr/lib/cctbx/python3.12"), 'command_line_redirections': {}, 'command_version_suffix': None, 'dispatcher_name': None, 'exe_path': relocatable_path(anchor="/usr", relocatable="bin"), 'explicitly_requested_modules': {'annlib', 'annlib_adaptbx', 'boost_adaptbx', 'cbflib_adaptbx', 'ccp4io', 'ccp4io_adaptbx', 'cctbx', 'cma_es', 'crys3d', 'dxtbx', 'fable', 'gltbx', 'iotbx', 'libtbx', 'mmtbx', 'omptbx', 'rstbx', 'scitbx', 'serialtbx', 'smtbx', 'spotfinder', 'tbxx', 'wxtbx'}, 'full_testing': False, 'include_path': relocatable_path(anchor="/usr", relocatable="include"), 'installed': True, 'installed_modules': [], 'installed_order': [], 'lib_path': relocatable_path(anchor="/usr", relocatable="lib"), 'missing_for_build': set(), 'missing_for_use': set(), 'missing_optional': {'king', 'reduce', 'docutils', 'probe', 'cbflib'}, 'module_dict': {'annlib': , 'boost': , 'cbflib': , 'ccp4io': , 'cctbx': , 'chiltbx': , 'cma_es': , 'crys3d': , 'dxtbx': , 'fable': , 'gltbx': , 'iotbx': , 'libtbx': , 'mmtbx': , 'omptbx': , 'rstbx': , 'scitbx': , 'serialtbx': , 'smtbx': , 'spotfinder': , 'tbxx': , 'ucif': , 'wxtbx': }, 'module_dist_paths': {'annlib': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib"), 'annlib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/annlib_adaptbx"), 'boost': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost"), 'boost_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/boost_adaptbx"), 'cbflib_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cbflib_adaptbx"), 'ccp4io': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ccp4io"), 'ccp4io_adaptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ccp4io_adaptbx"), 'cctbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cctbx"), 'chiltbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/chiltbx"), 'cma_es': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/cma_es"), 'crys3d': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/crys3d"), 'dxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/dxtbx"), 'fable': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/fable"), 'gltbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/gltbx"), 'iotbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/iotbx"), 'libtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx"), 'mmtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/mmtbx"), 'omptbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/omptbx"), 'rstbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/rstbx"), 'scitbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/scitbx"), 'serialtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/serialtbx"), 'smtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/smtbx"), 'spotfinder': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/spotfinder"), 'tbxx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/tbxx"), 'ucif': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/ucif"), 'wxtbx': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/wxtbx")}, 'module_list': [, , , , , , , , , , , , , , , , , , , , , , ], 'no_bin_python': True, 'path_utility': relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages/libtbx/command_line/path_utility.py"), 'python_exe': relocatable_path(anchor="/usr", relocatable="bin/python3.12"), 'python_version_major_minor': (3, 12), 'pythonpath': [], 'relocatable': True, 'repository_paths': [relocatable_path(anchor="/usr", relocatable="lib/python3/dist-packages")], 'scons_dist_path': relocatable_path(anchor="/usr", relocatable=".")} building file list ... done ./ boost_adaptbx/ boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy iotbx/ iotbx/pdb/ iotbx/pdb/hybrid_36_fem scitbx/ scitbx/array_family/ scitbx/array_family/tst_accessors scitbx/array_family/tst_af_1 scitbx/array_family/tst_af_2 scitbx/array_family/tst_af_3 scitbx/array_family/tst_af_4 scitbx/array_family/tst_af_5 scitbx/array_family/tst_mat3 scitbx/array_family/tst_optional_copy scitbx/array_family/tst_rectangular_full_packed scitbx/array_family/tst_ref_matrix_facet scitbx/array_family/tst_sym_mat3 scitbx/array_family/tst_unsigned_float_arithmetic scitbx/array_family/tst_vec3 scitbx/error/ scitbx/error/tst_error scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky scitbx/matrix/tests/tst_givens scitbx/matrix/tests/tst_householder scitbx/matrix/tests/tst_svd scitbx/serialization/ scitbx/serialization/tst_base_256 smtbx/ smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens smtbx/refinement/constraints/tests/tst_reparametrisation smtbx/refinement/constraints/tests/tst_special_position sent 16,068,989 bytes received 568 bytes 10,713,038.00 bytes/sec total size is 16,057,392 speedup is 1.00 building file list ... done ./ libann_adaptor.so -> libann_adaptor.so.0.0.1 libann_adaptor.so.0 -> libann_adaptor.so.0.0.1 libann_adaptor.so.0.0.1 libasymmetric_map.so -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0 -> libasymmetric_map.so.0.0.1 libasymmetric_map.so.0.0.1 libcbf-private.so -> libcbf-private.so.0.0.1 libcbf-private.so.0 -> libcbf-private.so.0.0.1 libcbf-private.so.0.0.1 libccp4io.so -> libccp4io.so.0.0.1 libccp4io.so.0 -> libccp4io.so.0.0.1 libccp4io.so.0.0.1 libcctbx.so -> libcctbx.so.0.0.1 libcctbx.so.0 -> libcctbx.so.0.0.1 libcctbx.so.0.0.1 libcctbx_sgtbx_asu.so -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0 -> libcctbx_sgtbx_asu.so.0.0.1 libcctbx_sgtbx_asu.so.0.0.1 libdxtbxspotfinder.so -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0 -> libdxtbxspotfinder.so.0.0.1 libdxtbxspotfinder.so.0.0.1 libiotbx_mtz.so -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0 -> libiotbx_mtz.so.0.0.1 libiotbx_mtz.so.0.0.1 libiotbx_pdb.so -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0 -> libiotbx_pdb.so.0.0.1 libiotbx_pdb.so.0.0.1 libiotbx_xplor.so -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0 -> libiotbx_xplor.so.0.0.1 libiotbx_xplor.so.0.0.1 libmmtbx_masks.so -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0 -> libmmtbx_masks.so.0.0.1 libmmtbx_masks.so.0.0.1 libmmtbx_tls.so -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0 -> libmmtbx_tls.so.0.0.1 libmmtbx_tls.so.0.0.1 libomptbx.so -> libomptbx.so.0.0.1 libomptbx.so.0 -> libomptbx.so.0.0.1 libomptbx.so.0.0.1 librstbx.so -> librstbx.so.0.0.1 librstbx.so.0 -> librstbx.so.0.0.1 librstbx.so.0.0.1 libscitbx_boost_python.so -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0 -> libscitbx_boost_python.so.0.0.1 libscitbx_boost_python.so.0.0.1 libscitbx_minpack.so -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0 -> libscitbx_minpack.so.0.0.1 libscitbx_minpack.so.0.0.1 libscitbx_slatec.so -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0 -> libscitbx_slatec.so.0.0.1 libscitbx_slatec.so.0.0.1 libsmtbx_refinement_constraints.so -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0 -> libsmtbx_refinement_constraints.so.0.0.1 libsmtbx_refinement_constraints.so.0.0.1 libspotfinder.so -> libspotfinder.so.0.0.1 libspotfinder.so.0 -> libspotfinder.so.0.0.1 libspotfinder.so.0.0.1 sent 56,786,670 bytes received 494 bytes 37,858,109.33 bytes/sec total size is 56,769,922 speedup is 1.00 building file list ... done annlib_adaptbx/ annlib_adaptbx/ann_adaptor.h sent 2,232 bytes received 38 bytes 4,540.00 bytes/sec total size is 2,068 speedup is 0.91 building file list ... done boost_adaptbx/ boost_adaptbx/boost_range_python.hpp boost_adaptbx/convertible.h boost_adaptbx/exporting.hpp boost_adaptbx/floating_point_exceptions.h boost_adaptbx/hash.h boost_adaptbx/iterator_range.h boost_adaptbx/optional_conversions.h boost_adaptbx/precompiled.h boost_adaptbx/python_streambuf.h boost_adaptbx/std_pair_conversion.h boost_adaptbx/std_pair_fwd.h boost_adaptbx/swig_arg.hpp boost_adaptbx/tuple_conversion.h boost_adaptbx/graph/ boost_adaptbx/graph/graph_export_adaptor.hpp boost_adaptbx/graph/graph_type.hpp boost_adaptbx/graph/maximum_clique_greedy.hpp boost_adaptbx/graph/maximum_clique_rascal.hpp boost_adaptbx/graph/vertex_map.hpp boost_adaptbx/tests/ boost_adaptbx/tests/tst_optional_copy.h sent 73,896 bytes received 386 bytes 148,564.00 bytes/sec total size is 72,301 speedup is 0.97 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/basic.h cbflib_adaptbx/detectors/buffer_based_service.h cbflib_adaptbx/detectors/cbf_adaptor.h cbflib_adaptbx/detectors/cbf_byte_offset_optimized.h cbflib_adaptbx/detectors/mar_adaptor.h cbflib_adaptbx/detectors/boost_python/ cbflib_adaptbx/detectors/boost_python/cbf_binary_adaptor.h cbflib_adaptbx/detectors/boost_python/general_cbf_write.h sent 22,299 bytes received 158 bytes 44,914.00 bytes/sec total size is 21,627 speedup is 0.96 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/ccp4_ccplib_fem.hpp ccp4io_adaptbx/ccp4_diskio_fem.hpp ccp4io_adaptbx/ccp4_fftlib_fem.hpp ccp4io_adaptbx/ccp4_library_fem.hpp ccp4io_adaptbx/ccp4_maplib_fem.hpp ccp4io_adaptbx/ccp4_mtzlib_fem.hpp ccp4io_adaptbx/ccp4_other_fem.hpp ccp4io_adaptbx/ccp4_parser_f.h ccp4io_adaptbx/ccp4_parser_fem.hpp ccp4io_adaptbx/ccp4_symlib_fem.hpp ccp4io_adaptbx/cmaplib_f.h ccp4io_adaptbx/cmtzlib_f.h ccp4io_adaptbx/csymlib_f.h ccp4io_adaptbx/library_f.h ccp4io_adaptbx/printf_wrappers.h ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/fftlib.hpp sent 87,958 bytes received 326 bytes 176,568.00 bytes/sec total size is 86,683 speedup is 0.98 building file list ... done cctbx/ cctbx/adptbx.h cctbx/anharmonic.h cctbx/coordinates.h cctbx/crystal_orientation.h cctbx/cumulative_intensity_distribution.h cctbx/error.h cctbx/french_wilson.h cctbx/hendrickson_lattman.h cctbx/import_scitbx_af.h cctbx/miller.h cctbx/restraints.h cctbx/tagged_value.h cctbx/uctbx.h cctbx/adp_restraints/ cctbx/adp_restraints/adp_restraints.h cctbx/adp_restraints/adp_similarity.h cctbx/adp_restraints/aniso_restraints.h cctbx/adp_restraints/fixed_u_eq_adp.h cctbx/adp_restraints/isotropic_adp.h cctbx/adp_restraints/rigid_bond.h cctbx/adp_restraints/rigu.h cctbx/adptbx/ cctbx/adptbx/hirshfeld.h cctbx/covariance/ cctbx/covariance/covariance.h cctbx/crystal/ cctbx/crystal/asu_clusters.h cctbx/crystal/close_packing.h cctbx/crystal/coordination_sequences.h cctbx/crystal/direct_space_asu.h cctbx/crystal/incremental_pairs.h cctbx/crystal/namespace.h cctbx/crystal/neighbors_fast.h cctbx/crystal/neighbors_simple.h cctbx/crystal/pair_tables.h cctbx/crystal/site_cluster_analysis.h cctbx/crystal/symmetry.h cctbx/crystal/workarounds_bpl.h cctbx/dmtbx/ cctbx/dmtbx/triplet_generator.h cctbx/dmtbx/triplet_phase_relation.h cctbx/eltbx/ cctbx/eltbx/attenuation_coefficient.h cctbx/eltbx/basic.h cctbx/eltbx/chemical_elements.h cctbx/eltbx/covalent_radii.h cctbx/eltbx/electron_scattering.h cctbx/eltbx/fp_fdp.h cctbx/eltbx/henke.h cctbx/eltbx/icsd_radii.h cctbx/eltbx/neutron.h cctbx/eltbx/sasaki.h cctbx/eltbx/tiny_pse.h cctbx/eltbx/wavelengths.h cctbx/eltbx/xray_scattering.h cctbx/eltbx/xray_scattering/ cctbx/eltbx/xray_scattering/form_factor.h cctbx/eltbx/xray_scattering/gaussian.h cctbx/eltbx/xray_scattering/n_gaussian.h cctbx/eltbx/xray_scattering/n_gaussian_raw.h cctbx/examples/ cctbx/examples/merging/ cctbx/examples/merging/postrefine_base.h cctbx/examples/merging/xscale_prototype_core.h cctbx/geometry/ cctbx/geometry/geometry.h cctbx/geometry_restraints/ cctbx/geometry_restraints/angle.h cctbx/geometry_restraints/asu_cache.h cctbx/geometry_restraints/bond.h cctbx/geometry_restraints/bond_misc.h cctbx/geometry_restraints/bond_similarity.h cctbx/geometry_restraints/bond_sorted.h cctbx/geometry_restraints/chirality.h cctbx/geometry_restraints/dihedral.h cctbx/geometry_restraints/motif.h cctbx/geometry_restraints/namespace.h cctbx/geometry_restraints/nonbonded.h cctbx/geometry_restraints/nonbonded_sorted.h cctbx/geometry_restraints/parallelity.h cctbx/geometry_restraints/planarity.h cctbx/geometry_restraints/proxy_select.h cctbx/geometry_restraints/shared_wrapper_pickle.hpp cctbx/geometry_restraints/sorted_asu_proxies.h cctbx/geometry_restraints/utils.h cctbx/maptbx/ cctbx/maptbx/asymmetric_map.h cctbx/maptbx/average_densities.h cctbx/maptbx/connectivity.h cctbx/maptbx/coordinate_transformers.h cctbx/maptbx/copy.h cctbx/maptbx/fft.h cctbx/maptbx/fsc.h cctbx/maptbx/ft_analytical_1d_point_scatterer_at_origin.h cctbx/maptbx/grid_indices_around_sites.h cctbx/maptbx/grid_tags.h cctbx/maptbx/gridding.h cctbx/maptbx/histogram.h cctbx/maptbx/interpolation.h cctbx/maptbx/loft.h cctbx/maptbx/map_accumulator.h cctbx/maptbx/marked_grid_points.h cctbx/maptbx/mask.h cctbx/maptbx/mask_utils.h cctbx/maptbx/namespace.h cctbx/maptbx/peak_search.h cctbx/maptbx/resolution.h cctbx/maptbx/skeletons.h cctbx/maptbx/sphericity.h cctbx/maptbx/standard_deviations_around_sites.hpp cctbx/maptbx/statistics.h cctbx/maptbx/structure_factors.h cctbx/maptbx/target_and_gradients.h cctbx/maptbx/utils.h cctbx/maptbx/accessors/ cctbx/maptbx/accessors/c_grid_p1.h cctbx/maptbx/accessors/c_grid_padded_p1.h cctbx/maptbx/bcr/ cctbx/maptbx/bcr/bcr.h cctbx/masks/ cctbx/masks/around_atoms.h cctbx/masks/flood_fill.h cctbx/math/ cctbx/math/array_utils.h cctbx/math/cos_sin_table.h cctbx/math/loop_n_from_m.h cctbx/math/mod.h cctbx/miller/ cctbx/miller/amplitude_normalisation.h cctbx/miller/asu.h cctbx/miller/bins.h cctbx/miller/change_basis.h cctbx/miller/expand_to_p1.h cctbx/miller/f_calc_map.h cctbx/miller/index_generator.h cctbx/miller/index_span.h cctbx/miller/lookup_utils.h cctbx/miller/match.h cctbx/miller/match_bijvoet_mates.h cctbx/miller/match_indices.h cctbx/miller/match_multi_indices.h cctbx/miller/math.h cctbx/miller/merge_equivalents.h cctbx/miller/phase_integrator.h cctbx/miller/phase_transfer.h cctbx/miller/randomize_amplitude_and_phase.h cctbx/miller/slices.h cctbx/miller/sym_equiv.h cctbx/miller/union_of_indices.h cctbx/multipolar/ cctbx/multipolar/aspherical.h cctbx/sgtbx/ cctbx/sgtbx/basic.h cctbx/sgtbx/brick.h cctbx/sgtbx/change_of_basis_op.h cctbx/sgtbx/find_affine.h cctbx/sgtbx/group_codes.h cctbx/sgtbx/lattice_symmetry.h cctbx/sgtbx/lattice_tr.h cctbx/sgtbx/miller_ops.h cctbx/sgtbx/operator_from_axis_direction.h cctbx/sgtbx/parse_string.h cctbx/sgtbx/phase_info.h cctbx/sgtbx/reciprocal_space_asu.h cctbx/sgtbx/reciprocal_space_reference_asu.h cctbx/sgtbx/reference_settings.h cctbx/sgtbx/rot_mx.h cctbx/sgtbx/rot_mx_hash.h cctbx/sgtbx/rot_mx_info.h cctbx/sgtbx/rotation_matrices.h cctbx/sgtbx/row_echelon_solve.h cctbx/sgtbx/rt_mx.h cctbx/sgtbx/rt_mx_hash.h cctbx/sgtbx/search_symmetry.h cctbx/sgtbx/select_generators.h cctbx/sgtbx/seminvariant.h cctbx/sgtbx/site_constraints.h cctbx/sgtbx/site_symmetry.h cctbx/sgtbx/site_symmetry_table.h cctbx/sgtbx/smith_normal_form.h cctbx/sgtbx/space_group.h cctbx/sgtbx/space_group_hash.h cctbx/sgtbx/space_group_type.h cctbx/sgtbx/sym_equiv_sites.h cctbx/sgtbx/symbols.h cctbx/sgtbx/sys_abs_equiv.h cctbx/sgtbx/tensor_rank_2.h cctbx/sgtbx/tensors.h cctbx/sgtbx/tr_group.h cctbx/sgtbx/tr_group_hash.h cctbx/sgtbx/tr_vec.h cctbx/sgtbx/tr_vec_hash.h cctbx/sgtbx/utils.h cctbx/sgtbx/wyckoff.h cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/asymmetric_unit.h cctbx/sgtbx/direct_space_asu/proto/cut.h cctbx/sgtbx/direct_space_asu/proto/direct_space_asu.h cctbx/sgtbx/direct_space_asu/proto/expressions.h cctbx/sgtbx/direct_space_asu/proto/facet_collection.h cctbx/sgtbx/direct_space_asu/proto/reference_table.h cctbx/sgtbx/direct_space_asu/proto/shortcuts.h cctbx/sgtbx/direct_space_asu/proto/small_vec_math.h cctbx/symmetry_search/ cctbx/symmetry_search/translation_refinement.h cctbx/translation_search/ cctbx/translation_search/fast_nv1995.h cctbx/translation_search/fast_terms.h cctbx/translation_search/namespace.h cctbx/translation_search/symmetry_flags.h cctbx/translation_search/fast_nv1995/ cctbx/translation_search/fast_nv1995/combinations.h cctbx/translation_search/fast_nv1995/intermediates.h cctbx/translation_search/fast_nv1995/summations.h cctbx/uctbx/ cctbx/uctbx/fast_minimum_reduction.h cctbx/uctbx/determine_unit_cell/ cctbx/uctbx/determine_unit_cell/NCDist.h cctbx/xray/ cctbx/xray/conversions.h cctbx/xray/curvatures_simple.h cctbx/xray/each_hkl_gradients_direct.h cctbx/xray/extinction.h cctbx/xray/f_model.h cctbx/xray/fast_gradients.h cctbx/xray/gradient_flags.h cctbx/xray/gradients_direct.h cctbx/xray/grouped_data.h cctbx/xray/hr_ht_cache.h cctbx/xray/minimization.h cctbx/xray/observations.h cctbx/xray/packing_order.h cctbx/xray/parameter_map.h cctbx/xray/sampled_model_density.h cctbx/xray/sampling_base.h cctbx/xray/sampling_loop.h cctbx/xray/scatterer.h cctbx/xray/scatterer_flags.h cctbx/xray/scatterer_utils.h cctbx/xray/scattering_type_registry.h cctbx/xray/sigmaa.h cctbx/xray/structure_factors_direct.h cctbx/xray/structure_factors_simple.h cctbx/xray/targets.h cctbx/xray/twin_component.h cctbx/xray/twin_targets.h cctbx/xray/targets/ cctbx/xray/targets/common_results.h cctbx/xray/targets/correlation.h cctbx/xray/targets/least_squares.h cctbx/xray/targets/mlf.h cctbx/xray/targets/mlhl.h cctbx/xray/targets/mli.h cctbx/xray/targets/shelxl_wght_ls.hpp sent 1,904,967 bytes received 4,420 bytes 3,818,774.00 bytes/sec total size is 1,887,892 speedup is 0.99 building file list ... done cma_es/ cma_es/cma/ cma_es/cma/cmaes.h cma_es/cma/cmaes_interface.h sent 6,888 bytes received 60 bytes 4,632.00 bytes/sec total size is 6,671 speedup is 0.96 building file list ... done sent 196 bytes received 12 bytes 416.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done dxtbx/ dxtbx/error.h dxtbx/imageset.h dxtbx/array_family/ dxtbx/array_family/flex_table.h dxtbx/array_family/flex_table_suite.h dxtbx/array_family/ref_pickle_double_buffered.h dxtbx/boost_python/ dxtbx/boost_python/compression.h dxtbx/format/ dxtbx/format/image.h dxtbx/format/boost_python/ dxtbx/format/boost_python/cbf_read_buffer.h dxtbx/masking/ dxtbx/masking/goniometer_shadow_masking.h dxtbx/masking/masking.h dxtbx/model/ dxtbx/model/beam.h dxtbx/model/crystal.h dxtbx/model/detector.h dxtbx/model/experiment.h dxtbx/model/experiment_list.h dxtbx/model/goniometer.h dxtbx/model/kappa_goniometer.h dxtbx/model/model_helpers.h dxtbx/model/multi_axis_goniometer.h dxtbx/model/panel.h dxtbx/model/panel_data.h dxtbx/model/parallax_correction.h dxtbx/model/pixel_to_millimeter.h dxtbx/model/ray_intersection.h dxtbx/model/scan.h dxtbx/model/scan_helpers.h dxtbx/model/spectrum.h dxtbx/model/virtual_panel.h dxtbx/model/boost_python/ dxtbx/model/boost_python/pickle_suite.h dxtbx/model/boost_python/to_from_dict.h sent 393,393 bytes received 610 bytes 788,006.00 bytes/sec total size is 390,974 speedup is 0.99 building file list ... done ./ fem.hpp noexcept_false.hpp fem/ fem/arr.hpp fem/arr_and_str_indices.hpp fem/arr_ref.hpp fem/arr_size.hpp fem/close_chain.hpp fem/common.hpp fem/data.hpp fem/data_of_type.hpp fem/data_type_star.hpp fem/dimension.hpp fem/do.hpp fem/error_utils.hpp fem/file_positioning_chain.hpp fem/format.hpp fem/inquire_chain.hpp fem/intrinsics.hpp fem/intrinsics_extra.hpp fem/io.hpp fem/io_exceptions.hpp fem/main.hpp fem/major_types.hpp fem/open_chain.hpp fem/read.hpp fem/size_t.hpp fem/star.hpp fem/stop.hpp fem/str.hpp fem/str_arr_ref.hpp fem/str_ref.hpp fem/variant.hpp fem/write.hpp fem/zero.hpp fem/utils/ fem/utils/char.hpp fem/utils/double_to_string.hpp fem/utils/equivalence.hpp fem/utils/int_types.hpp fem/utils/misc.hpp fem/utils/path.hpp fem/utils/random.hpp fem/utils/real_as_string.hpp fem/utils/simple_streams.hpp fem/utils/string.hpp fem/utils/string_to_double.hpp fem/utils/string_to_double_fmt.hpp fem/utils/token.hpp sent 204,005 bytes received 918 bytes 409,846.00 bytes/sec total size is 200,764 speedup is 0.98 building file list ... done gltbx/ gltbx/error.h gltbx/error_utils.h gltbx/fonts_ucs.h gltbx/glext.h gltbx/include_opengl.h gltbx/pointer_args_bpl.h gltbx/quadrics.h gltbx/special_wrapper_support.h gltbx/util.h sent 598,801 bytes received 190 bytes 1,197,982.00 bytes/sec total size is 597,954 speedup is 1.00 building file list ... done iotbx/ iotbx/error.h iotbx/detectors/ iotbx/detectors/bruker.h iotbx/detectors/display.h iotbx/detectors/image_divider.h iotbx/detectors/scanbox.h iotbx/detectors/context/ iotbx/detectors/context/spot_xy_convention.h iotbx/dsn6/ iotbx/dsn6/dsn6.hpp iotbx/mtz/ iotbx/mtz/batch.h iotbx/mtz/column.h iotbx/mtz/crystal.h iotbx/mtz/dataset.h iotbx/mtz/object.h iotbx/pdb/ iotbx/pdb/common_residue_names.h iotbx/pdb/hierarchy.h iotbx/pdb/hierarchy_atoms.h iotbx/pdb/hierarchy_bpl.h iotbx/pdb/hybrid_36_c.h iotbx/pdb/hybrid_36_cpp.h iotbx/pdb/input.h iotbx/pdb/modified_aa_names.h iotbx/pdb/modified_rna_dna_names.h iotbx/pdb/namespace.h iotbx/pdb/rna_dna_atom_names.h iotbx/pdb/small_str.h iotbx/pdb/utils.h iotbx/pdb/write_utils.h iotbx/pdb/write_utils_bpl.h iotbx/pdb/xray_structure.h iotbx/shelx/ iotbx/shelx/hklf.h iotbx/xplor/ iotbx/xplor/map_reader.h iotbx/xplor/map_writer.h sent 270,388 bytes received 629 bytes 542,034.00 bytes/sec total size is 267,526 speedup is 0.99 building file list ... done sent 484 bytes received 12 bytes 992.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done mmtbx/ mmtbx/error.h mmtbx/import_scitbx_af.h mmtbx/alignment/ mmtbx/alignment/align.h mmtbx/alignment/alignment.h mmtbx/alignment/tables.h mmtbx/building/ mmtbx/building/loop_closure/ mmtbx/building/loop_closure/ccd.h mmtbx/bulk_solvent/ mmtbx/bulk_solvent/bulk_solvent.h mmtbx/bulk_solvent/mosaic.h mmtbx/den/ mmtbx/den/den.h mmtbx/dynamics/ mmtbx/dynamics/dynamics.h mmtbx/f_model/ mmtbx/f_model/f_model.h mmtbx/geometry/ mmtbx/geometry/asa.hpp mmtbx/geometry/calculator.hpp mmtbx/geometry/clash.hpp mmtbx/geometry/containment.hpp mmtbx/geometry/flattening.hpp mmtbx/geometry/indexing.hpp mmtbx/geometry/overlap.hpp mmtbx/geometry/primitive.hpp mmtbx/geometry/sphere_surface_sampling.hpp mmtbx/geometry/boost_python/ mmtbx/geometry/boost_python/containment.hpp mmtbx/geometry/boost_python/indexing.hpp mmtbx/geometry_restraints/ mmtbx/geometry_restraints/ramachandran.h mmtbx/geometry_restraints/reference_coordinate.h mmtbx/hydrogens/ mmtbx/hydrogens/hydrogens.h mmtbx/masks/ mmtbx/masks/atom_mask.h mmtbx/masks/grid_symop.h mmtbx/masks/util.h mmtbx/max_lik/ mmtbx/max_lik/max_lik.h mmtbx/max_lik/solvent_distribution_nco_09may2005.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short.h mmtbx/max_lik/solvent_distribution_nco_09may2005_short_uniform.h mmtbx/max_lik/solvent_distribution_nco_14mar2005.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_mod.h mmtbx/max_lik/solvent_distribution_nco_14mar2005_short.h mmtbx/max_lik/wat_dist_r_0_1.h mmtbx/max_lik/wat_dist_r_2p0_2p5.h mmtbx/ncs/ mmtbx/ncs/cartesian_restraints.h mmtbx/ncs/tncs.h mmtbx/pair_interaction/ mmtbx/pair_interaction/interaction.h mmtbx/probe/ mmtbx/probe/Common.h mmtbx/probe/DotSpheres.h mmtbx/probe/Scoring.h mmtbx/probe/SpatialQuery.h mmtbx/reduce/ mmtbx/reduce/InteractionGraph.h mmtbx/reduce/Optimizers.h mmtbx/reduce/PositionReturn.h mmtbx/rotamer/ mmtbx/rotamer/fit.h mmtbx/rsr/ mmtbx/rsr/rsr.h mmtbx/scaling/ mmtbx/scaling/absolute_scaling.h mmtbx/scaling/outlier.h mmtbx/scaling/relative_scaling.h mmtbx/scaling/scaling.h mmtbx/scaling/twinning.h mmtbx/secondary_structure/ mmtbx/secondary_structure/dssp.hpp mmtbx/secondary_structure/identify.hpp mmtbx/tls/ mmtbx/tls/decompose.h mmtbx/tls/optimise_amplitudes.h mmtbx/tls/tls.h mmtbx/tls/utils.h mmtbx/utils/ mmtbx/utils/utils.h mmtbx/validation/ mmtbx/validation/ramachandran/ mmtbx/validation/ramachandran/rama8000_tables.h mmtbx/validation/ramachandran/rama_eval.h sent 2,052,661 bytes received 1,291 bytes 4,107,904.00 bytes/sec total size is 2,046,334 speedup is 1.00 building file list ... done omptbx/ omptbx/lock.h omptbx/omp_or_stubs.h omptbx/stubs.h sent 2,115 bytes received 76 bytes 4,382.00 bytes/sec total size is 1,850 speedup is 0.84 building file list ... done rstbx/ rstbx/backplane.h rstbx/import_scitbx_af.hpp rstbx/apps/ rstbx/apps/stills/ rstbx/apps/stills/simple_integration.h rstbx/bandpass/ rstbx/bandpass/parameters.h rstbx/bandpass/subpixel_joint_model.h rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/bpcx/detector_model/sensor.h rstbx/diffraction/ rstbx/diffraction/ewald_sphere.h rstbx/diffraction/partial_spot_position_partial_H.h rstbx/diffraction/reflection_range.h rstbx/diffraction/fastbragg/ rstbx/diffraction/fastbragg/fastbragg.h rstbx/dps_core/ rstbx/dps_core/direction.h rstbx/dps_core/directional_fft.h rstbx/dps_core/dps_core.h rstbx/dps_core/spotclass.h rstbx/indexing_api/ rstbx/indexing_api/indexing_api.h rstbx/simage/ rstbx/simage/image_simple.hpp rstbx/simulation/ rstbx/simulation/sim_xfel1.h rstbx/symmetry/ rstbx/symmetry/constraints/ rstbx/symmetry/constraints/a_g_conversion.h sent 111,358 bytes received 400 bytes 223,516.00 bytes/sec total size is 109,476 speedup is 0.98 building file list ... done scitbx/ scitbx/auto_array.h scitbx/constants.h scitbx/cubicle_neighbors.hpp scitbx/cubicles.h scitbx/error.h scitbx/error_utils.h scitbx/histogram.h scitbx/indexed_value.h scitbx/iso_surface.h scitbx/lbfgs.h scitbx/lbfgsb.h scitbx/mat2.h scitbx/mat3.h scitbx/numerical.h scitbx/r3_utils.hpp scitbx/random.h scitbx/random_legacy_boost_1_63.h scitbx/rational.h scitbx/rotr3.h scitbx/sym_mat2.h scitbx/sym_mat3.h scitbx/type_holder.h scitbx/vec2.h scitbx/vec3.h scitbx/weighted_histogram.h scitbx/array_family/ scitbx/array_family/array_adaptor.h scitbx/array_family/block_iterator.h scitbx/array_family/counts.h scitbx/array_family/error.h scitbx/array_family/flex_types.h scitbx/array_family/initialiser.h scitbx/array_family/linear_interpolation.h scitbx/array_family/loops.h scitbx/array_family/memory.h scitbx/array_family/misc_functions.h scitbx/array_family/owning_ref.h scitbx/array_family/range.h scitbx/array_family/ref.h scitbx/array_family/ref_matrix.h scitbx/array_family/ref_reductions.h scitbx/array_family/selections.h scitbx/array_family/shared.h scitbx/array_family/shared_plain.h scitbx/array_family/simple_io.h scitbx/array_family/simple_tiny_io.h scitbx/array_family/slice.h scitbx/array_family/small.h scitbx/array_family/small_plain.h scitbx/array_family/sort.h scitbx/array_family/tiny.h scitbx/array_family/tiny_mat_ref.h scitbx/array_family/tiny_plain.h scitbx/array_family/tiny_types.h scitbx/array_family/type_traits.h scitbx/array_family/versa.h scitbx/array_family/versa_matrix.h scitbx/array_family/versa_plain.h scitbx/array_family/accessors/ scitbx/array_family/accessors/c_grid.h scitbx/array_family/accessors/c_grid_padded.h scitbx/array_family/accessors/c_grid_padded_periodic.h scitbx/array_family/accessors/c_grid_periodic.h scitbx/array_family/accessors/c_index_1d_calculator.h scitbx/array_family/accessors/c_interval_grid.h scitbx/array_family/accessors/f_grid.h scitbx/array_family/accessors/flex_grid.h scitbx/array_family/accessors/mat_grid.h scitbx/array_family/accessors/packed_matrix.h scitbx/array_family/accessors/rectangular_full_packed.h scitbx/array_family/accessors/row_and_column.h scitbx/array_family/accessors/striding.h scitbx/array_family/accessors/traits.h scitbx/array_family/accessors/trivial.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/byte_str.h scitbx/array_family/boost_python/c_grid_flex_conversions.h scitbx/array_family/boost_python/flex_helpers.h scitbx/array_family/boost_python/flex_pickle_double_buffered.h scitbx/array_family/boost_python/flex_pickle_single_buffered.h scitbx/array_family/boost_python/flex_wrapper.h scitbx/array_family/boost_python/flex_wrapper_complex.h scitbx/array_family/boost_python/numpy_bridge.hpp scitbx/array_family/boost_python/owning_ref_conversions.h scitbx/array_family/boost_python/packed_to_flex_conversions.h scitbx/array_family/boost_python/passing_flex_by_reference.h scitbx/array_family/boost_python/range_wrappers.h scitbx/array_family/boost_python/ref_flex_conversions.h scitbx/array_family/boost_python/ref_from_array.h scitbx/array_family/boost_python/ref_pickle_double_buffered.h scitbx/array_family/boost_python/selections_wrapper.h scitbx/array_family/boost_python/shared_flat_conversions.h scitbx/array_family/boost_python/shared_flex_conversions.h scitbx/array_family/boost_python/shared_wrapper.h scitbx/array_family/boost_python/utils.h scitbx/array_family/detail/ scitbx/array_family/detail/auto_allocator.h scitbx/array_family/detail/generic_array_functors.h scitbx/array_family/detail/generic_array_operators.h scitbx/array_family/detail/misc.h scitbx/array_family/detail/push_back_etc.h scitbx/array_family/detail/reducing_boolean_mem_fun.h scitbx/array_family/detail/ref_helpers.h scitbx/array_family/detail/tiny_helpers.h scitbx/boost_python/ scitbx/boost_python/array_as_list.h scitbx/boost_python/container_conversions.h scitbx/boost_python/cstringio_utils.h scitbx/boost_python/is_polymorphic_workaround.h scitbx/boost_python/iterator_range.hpp scitbx/boost_python/iterator_wrappers.h scitbx/boost_python/pair_as_tuple.hpp scitbx/boost_python/sequence_as_array.h scitbx/boost_python/slice.h scitbx/boost_python/stl_map_as_dict.h scitbx/boost_python/utils.h scitbx/examples/ scitbx/examples/bevington/ scitbx/examples/bevington/prototype_core.h scitbx/fftpack/ scitbx/fftpack/complex_to_complex.h scitbx/fftpack/complex_to_complex_2d.h scitbx/fftpack/complex_to_complex_3d.h scitbx/fftpack/factorization.h scitbx/fftpack/gridding.h scitbx/fftpack/real_to_complex.h scitbx/fftpack/real_to_complex_3d.h scitbx/fftpack/detail/ scitbx/fftpack/detail/real_to_complex_backward.h scitbx/fftpack/detail/real_to_complex_forward.h scitbx/fftpack/detail/ref.h scitbx/glmtbx/ scitbx/glmtbx/family.h scitbx/glmtbx/glm.h scitbx/glmtbx/robust_glm.h scitbx/graphics_utils/ scitbx/graphics_utils/colors.h scitbx/lbfgs/ scitbx/lbfgs/drop_convergence_test.h scitbx/lbfgs/raw.h scitbx/lbfgs/raw_reference.h scitbx/lbfgsb/ scitbx/lbfgsb/fortran_interface.h scitbx/lbfgsb/raw.h scitbx/line_search/ scitbx/line_search/more_thuente_1994.h scitbx/line_search/more_thuente_1994_raw.h scitbx/lstbx/ scitbx/lstbx/normal_equations.h scitbx/math/ scitbx/math/2d_zernike_moments.h scitbx/math/accumulators.h scitbx/math/angle_derivative.h scitbx/math/approx_equal.h scitbx/math/atanh.h scitbx/math/basic_statistics.h scitbx/math/bessel.h scitbx/math/cartesian_product_fixed_size.hpp scitbx/math/chebyshev.h scitbx/math/compile_time.h scitbx/math/continued_fraction.h scitbx/math/copysign.h scitbx/math/cubic_equation.h scitbx/math/dihedral.h scitbx/math/distance_difference.h scitbx/math/distributions.h scitbx/math/eigensystem.h scitbx/math/erf.h scitbx/math/euler_angles.h scitbx/math/fast_approx_math.h scitbx/math/floating_point_epsilon.h scitbx/math/g_function.h scitbx/math/gamma.h scitbx/math/gaussian_fit_1d_analytical.h scitbx/math/gcd.h scitbx/math/golay.h scitbx/math/halton.h scitbx/math/icosahedron.h scitbx/math/imaginary.h scitbx/math/inertia_tensor.h scitbx/math/interpolation.h scitbx/math/jacks_expf.h scitbx/math/lambertw.h scitbx/math/least_squares_plane.h scitbx/math/linear_correlation.h scitbx/math/linear_interpolation.h scitbx/math/linear_regression.h scitbx/math/mean_and_variance.h scitbx/math/minimum_covering_sphere.h scitbx/math/modulo.h scitbx/math/namespace.h scitbx/math/numeric_limits.h scitbx/math/orthonormal_basis.h scitbx/math/parabolic_cylinder_d.h scitbx/math/phase_error.h scitbx/math/polygon_intersection.h scitbx/math/principal_axes_of_inertia.h scitbx/math/quadrature.h scitbx/math/r3_rotation.h scitbx/math/resample.h scitbx/math/rotate_around_axis.h scitbx/math/rotation.h scitbx/math/superpose.h scitbx/math/tetrahedron.h scitbx/math/traits.h scitbx/math/unimodular_generator.h scitbx/math/utils.h scitbx/math/weighted_covariance.h scitbx/math/zernike.h scitbx/math/zernike_moments.h scitbx/math/erf/ scitbx/math/erf/constants.h scitbx/math/erf/engine.h scitbx/math/gaussian/ scitbx/math/gaussian/fit.h scitbx/math/gaussian/namespace.h scitbx/math/gaussian/sum.h scitbx/math/gaussian/term.h scitbx/matrix/ scitbx/matrix/as_xyz.h scitbx/matrix/cholesky.h scitbx/matrix/delta_tensors.h scitbx/matrix/diagonal.h scitbx/matrix/eigensystem.h scitbx/matrix/givens.h scitbx/matrix/householder.h scitbx/matrix/inversion.h scitbx/matrix/lu_decomposition.h scitbx/matrix/matrix_vector_operations.h scitbx/matrix/move.h scitbx/matrix/multiply.h scitbx/matrix/norms.h scitbx/matrix/outer_product.h scitbx/matrix/packed.h scitbx/matrix/row_echelon.h scitbx/matrix/row_echelon_full_pivoting.h scitbx/matrix/row_echelon_full_pivoting_impl.h scitbx/matrix/row_echelon_full_pivoting_small.h scitbx/matrix/special_matrices.h scitbx/matrix/svd.h scitbx/matrix/symmetric_rank_1_update.h scitbx/matrix/tensor_rank_2.h scitbx/matrix/tensors.h scitbx/matrix/tests.h scitbx/matrix/transpose_multiply.h scitbx/matrix/triangular_systems.h scitbx/matrix/vector_operations.h scitbx/matrix/tests/ scitbx/matrix/tests/utils.h scitbx/minpack/ scitbx/minpack/levenberg_marquardt.h scitbx/minpack/raw.h scitbx/misc/ scitbx/misc/file_utils.h scitbx/misc/positive_getitem_index.h scitbx/misc/split_lines.h scitbx/random/ scitbx/random/mersenne_twister.h scitbx/random/variate_generator.h scitbx/random/boost_python/ scitbx/random/boost_python/random.h scitbx/rigid_body/ scitbx/rigid_body/array_packing.h scitbx/rigid_body/body_lib.h scitbx/rigid_body/body_t.h scitbx/rigid_body/featherstone.h scitbx/rigid_body/joint_lib.h scitbx/rigid_body/joint_t.h scitbx/rigid_body/matrix_helpers.h scitbx/rigid_body/namespace.h scitbx/rigid_body/spatial_lib.h scitbx/rigid_body/tardy.h scitbx/serialization/ scitbx/serialization/base_256.h scitbx/serialization/double_buffered.h scitbx/serialization/single_buffered.h scitbx/slatec/ scitbx/slatec/lib_c.h scitbx/slatec/lib_cpp.h scitbx/sparse/ scitbx/sparse/approx_equal.h scitbx/sparse/dfs.h scitbx/sparse/io.h scitbx/sparse/lu_factorization.h scitbx/sparse/matrix.h scitbx/sparse/operators.h scitbx/sparse/random.h scitbx/sparse/triangular.h scitbx/sparse/util.h scitbx/sparse/vector.h scitbx/sparse/boost_python/ scitbx/sparse/boost_python/vector.h scitbx/stl/ scitbx/stl/map_as_python_dict.h scitbx/stl/map_fwd.h scitbx/stl/map_wrapper.h scitbx/stl/set_wrapper.h scitbx/stl/vector_as_python_list.h scitbx/stl/vector_io.h scitbx/stl/vector_wrapper.h scitbx/suffixtree/ scitbx/suffixtree/builder.hpp scitbx/suffixtree/edge.hpp scitbx/suffixtree/exception.hpp scitbx/suffixtree/glyph.hpp scitbx/suffixtree/iterator.hpp scitbx/suffixtree/matching_statistics.hpp scitbx/suffixtree/tree.hpp scitbx/suffixtree/word.hpp scitbx/suffixtree/boost_python/ scitbx/suffixtree/boost_python/edge_exports.hpp scitbx/suffixtree/boost_python/iterator_wrapper.hpp scitbx/suffixtree/boost_python/object_extensions.hpp scitbx/suffixtree/boost_python/tree_exports.hpp scitbx/util/ scitbx/util/cpu_timer.h scitbx/wigner/ scitbx/wigner/wigner3j.h sent 1,905,945 bytes received 5,521 bytes 1,274,310.67 bytes/sec total size is 1,885,735 speedup is 0.99 building file list ... done sent 152 bytes received 12 bytes 328.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/error.h smtbx/import_cctbx.h smtbx/import_scitbx_af.h smtbx/ab_initio/ smtbx/ab_initio/density_modification.h smtbx/refinement/ smtbx/refinement/import_cctbx_xray.h smtbx/refinement/least_squares.h smtbx/refinement/weighting_schemes.h smtbx/refinement/constraints/ smtbx/refinement/constraints/affine.h smtbx/refinement/constraints/direction.h smtbx/refinement/constraints/geometrical_hydrogens.h smtbx/refinement/constraints/occupancy.h smtbx/refinement/constraints/proxy.h smtbx/refinement/constraints/reparametrisation.h smtbx/refinement/constraints/rigid.h smtbx/refinement/constraints/same_group.h smtbx/refinement/constraints/scaled_adp.h smtbx/refinement/constraints/scatterer_parameters.h smtbx/refinement/constraints/shared.h smtbx/refinement/constraints/special_position.h smtbx/refinement/constraints/symmetry_equivalent.h smtbx/refinement/constraints/u_eq_dependent_u_iso.h smtbx/refinement/constraints/u_iso_dependent_u_iso.h smtbx/refinement/restraints/ smtbx/refinement/restraints/origin_fixing.h smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/standard_xray.h smtbx/structure_factors/direct/table_based.h sent 182,166 bytes received 512 bytes 365,356.00 bytes/sec total size is 179,686 speedup is 0.98 building file list ... done spotfinder/ spotfinder/applications/ spotfinder/applications/find_active_area.h spotfinder/core_toolbox/ spotfinder/core_toolbox/distl.h spotfinder/core_toolbox/hough.h spotfinder/core_toolbox/libdistl.h spotfinder/core_toolbox/spot_shapes.h spotfinder/core_toolbox/spot_types.h spotfinder/core_toolbox/spotfilter.h spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/singlemask.h spotfinder/dxtbx_toolbox/ spotfinder/dxtbx_toolbox/distl.h spotfinder/dxtbx_toolbox/libdistl.h sent 42,950 bytes received 221 bytes 86,342.00 bytes/sec total size is 41,966 speedup is 0.97 building file list ... done tbxx/ tbxx/alignment.h tbxx/error_utils.hpp tbxx/libc_backtrace.hpp tbxx/optional_copy.hpp tbxx/pretty_type_name.hpp tbxx/time_accu.hpp sent 12,028 bytes received 133 bytes 24,322.00 bytes/sec total size is 11,532 speedup is 0.95 building file list ... done sent 157 bytes received 12 bytes 338.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done ./ boost_adaptbx/ boost_adaptbx/type_id_eq.h cctbx/ cctbx/boost_python/ cctbx/boost_python/flex_fwd.h scitbx/ scitbx/lbfgs_fem.hpp scitbx/array_family/ scitbx/array_family/operator_traits_builtin.h scitbx/array_family/ref_algebra.h scitbx/array_family/ref_apply.h scitbx/array_family/shared_algebra.h scitbx/array_family/shared_apply.h scitbx/array_family/shared_plain_apply.h scitbx/array_family/shared_reductions.h scitbx/array_family/small_algebra.h scitbx/array_family/small_apply.h scitbx/array_family/small_plain_apply.h scitbx/array_family/small_reductions.h scitbx/array_family/tiny_algebra.h scitbx/array_family/tiny_apply.h scitbx/array_family/tiny_plain_apply.h scitbx/array_family/tiny_reductions.h scitbx/array_family/versa_algebra.h scitbx/array_family/versa_apply.h scitbx/array_family/versa_plain_apply.h scitbx/array_family/versa_reductions.h scitbx/array_family/boost_python/ scitbx/array_family/boost_python/flex_fwd.h scitbx/array_family/detail/ scitbx/array_family/detail/operator_functors.h scitbx/array_family/detail/std_imports.h smtbx/ smtbx/boost_python/ smtbx/boost_python/flex_fwd.h sent 347,343 bytes received 540 bytes 695,766.00 bytes/sec total size is 345,070 speedup is 0.99 building file list ... done sent 248 bytes received 12 bytes 520.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/ boost_adaptbx/command_line/ sent 574 bytes received 55 bytes 1,258.00 bytes/sec total size is 6,883 speedup is 10.94 building file list ... done cbflib_adaptbx/ cbflib_adaptbx/command_line/ sent 242 bytes received 28 bytes 540.00 bytes/sec total size is 1,215 speedup is 4.50 building file list ... done sent 149 bytes received 12 bytes 107.33 bytes/sec total size is 0 speedup is 0.00 building file list ... done cctbx/ cctbx/command_line/ cctbx/command_line/web.install.csh sent 3,125 bytes received 101 bytes 2,150.67 bytes/sec total size is 39,666 speedup is 12.30 building file list ... done sent 87 bytes received 12 bytes 198.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done crys3d/ crys3d/command_line/ sent 510 bytes received 52 bytes 1,124.00 bytes/sec total size is 31,515 speedup is 56.08 building file list ... done dxtbx/ dxtbx/command_line/ sent 936 bytes received 82 bytes 2,036.00 bytes/sec total size is 82,029 speedup is 80.58 building file list ... done fable/ fable/command_line/ sent 487 bytes received 43 bytes 1,060.00 bytes/sec total size is 15,542 speedup is 29.32 building file list ... done gltbx/ gltbx/command_line/ sent 191 bytes received 28 bytes 438.00 bytes/sec total size is 606 speedup is 2.77 building file list ... done iotbx/ iotbx/command_line/ sent 3,064 bytes received 244 bytes 6,616.00 bytes/sec total size is 240,966 speedup is 72.84 building file list ... done libtbx/ libtbx/command_line/ libtbx/command_line/bash.sh libtbx/command_line/bibtex.sh libtbx/command_line/bundle_as_selfx.csh libtbx/command_line/configure.bat libtbx/command_line/configure.sh libtbx/command_line/csh.sh libtbx/command_line/exec.sh libtbx/command_line/gdb.sh libtbx/command_line/latex.sh libtbx/command_line/pdflatex.sh libtbx/command_line/refresh.bat libtbx/command_line/refresh.sh libtbx/command_line/sh.sh libtbx/command_line/tcsh.sh libtbx/command_line/unpack_in_sources.csh libtbx/command_line/valgrind.sh sent 7,594 bytes received 614 bytes 16,416.00 bytes/sec total size is 175,907 speedup is 21.43 building file list ... done mmtbx/ mmtbx/command_line/ mmtbx/regression/ mmtbx/regression/command_line/ mmtbx/regression/command_line/tst_find_residue_in_pdb.py sent 5,380 bytes received 407 bytes 11,574.00 bytes/sec total size is 712,953 speedup is 123.20 building file list ... done sent 76 bytes received 12 bytes 176.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done rstbx/ rstbx/command_line/ sent 804 bytes received 49 bytes 1,706.00 bytes/sec total size is 11,108 speedup is 13.02 building file list ... done scitbx/ scitbx/command_line/ scitbx/command_line/apply_tapenade_hints.py scitbx/command_line/generate_error_h.py scitbx/command_line/histogram.py scitbx/command_line/show_exp_times.py scitbx/command_line/show_sizes.py scitbx/command_line/unicode_examples.py sent 11,757 bytes received 136 bytes 23,786.00 bytes/sec total size is 9,958 speedup is 0.84 building file list ... done sent 152 bytes received 12 bytes 328.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ smtbx/command_line/ sent 916 bytes received 40 bytes 1,912.00 bytes/sec total size is 37,436 speedup is 39.16 building file list ... done spotfinder/ spotfinder/command_line/ sent 537 bytes received 43 bytes 1,160.00 bytes/sec total size is 22,750 speedup is 39.22 building file list ... done sent 87 bytes received 12 bytes 198.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done wxtbx/ wxtbx/command_line/ sent 506 bytes received 58 bytes 1,128.00 bytes/sec total size is 16,078 speedup is 28.51 building file list ... done sent 248 bytes received 12 bytes 173.33 bytes/sec total size is 0 speedup is 0.00 building file list ... done boost_adaptbx/graph/ boost_adaptbx/graph/tests/ boost_adaptbx/graph/tests/tst_graph.py boost_adaptbx/graph/tests/tst_graph_breadth_first_search.py boost_adaptbx/graph/tests/tst_graph_clustering_algorithm.py boost_adaptbx/graph/tests/tst_graph_connected_component_algorithm.py boost_adaptbx/graph/tests/tst_graph_graph_structure_comparison.py boost_adaptbx/graph/tests/tst_graph_maximum_clique.py boost_adaptbx/graph/tests/tst_graph_metric.py boost_adaptbx/graph/tests/tst_graph_min_cut_max_flow.py boost_adaptbx/graph/tests/tst_graph_minimum_cut_enumerate.py boost_adaptbx/graph/tests/tst_graph_utility.py boost_adaptbx/tests/ boost_adaptbx/tests/tst_boost_thread.py boost_adaptbx/tests/tst_char_array.py boost_adaptbx/tests/tst_deprecation_tools.py boost_adaptbx/tests/tst_libc_backtrace.py boost_adaptbx/tests/tst_optional.py boost_adaptbx/tests/tst_optional_copy.cpp boost_adaptbx/tests/tst_optional_copy.h boost_adaptbx/tests/tst_python_streambuf.py boost_adaptbx/tests/tst_rational.py boost_adaptbx/tests/tst_std_pair.py boost_adaptbx/tests/tst_stderr_stdout.py boost_adaptbx/tests/tst_stdin.py boost_adaptbx/tests/tst_stdout.py boost_adaptbx/tests/tst_string_representation.py boost_adaptbx/tests/tst_swig_args.py boost_adaptbx/tests/tst_tuple.py sent 91,658 bytes received 515 bytes 184,346.00 bytes/sec total size is 89,657 speedup is 0.97 building file list ... done cbflib_adaptbx/detectors/ cbflib_adaptbx/detectors/tst_memory.cpp sent 1,202 bytes received 34 bytes 2,472.00 bytes/sec total size is 967 speedup is 0.78 building file list ... done ccp4io_adaptbx/ ccp4io_adaptbx/dev/ ccp4io_adaptbx/dev/tst_fftlib.py sent 7,591 bytes received 44 bytes 15,270.00 bytes/sec total size is 9,205 speedup is 1.21 building file list ... done cctbx/adp_restraints/ cctbx/adptbx/ cctbx/adptbx/boost_python/ cctbx/adptbx/boost_python/tst_adptbx.py cctbx/adptbx/boost_python/tst_hirshfeld.py cctbx/array_family/ cctbx/array_family/boost_python/ cctbx/array_family/boost_python/tst_flex.py cctbx/covariance/ cctbx/covariance/tests/ cctbx/covariance/tests/tst_covariance.py cctbx/crystal/ cctbx/development/ cctbx/dispersion/ cctbx/dispersion/tests/ cctbx/dispersion/tests/tst_kramers_kronig.py cctbx/dispersion/tests/tst_kramers_kronig_helper.py cctbx/dispersion/tests/tst_kramers_kronig_optimize.py cctbx/dmtbx/ cctbx/dmtbx/boost_python/ cctbx/dmtbx/boost_python/tst_dmtbx.py cctbx/eltbx/ cctbx/eltbx/tests/ cctbx/eltbx/tests/tst_attenuation_coefficient.py cctbx/eltbx/tests/tst_chemical_elements.py cctbx/eltbx/tests/tst_covalent_radii.py cctbx/eltbx/tests/tst_formula.py cctbx/eltbx/tests/tst_henke.py cctbx/eltbx/tests/tst_icsd_radii.py cctbx/eltbx/tests/tst_neutron.py cctbx/eltbx/tests/tst_sasaki.py cctbx/eltbx/tests/tst_tiny_pse.py cctbx/eltbx/tests/tst_wavelengths.py cctbx/eltbx/tests/tst_xray_scattering.py cctbx/examples/ cctbx/examples/merging/ cctbx/geometry/ cctbx/geometry/tests/ cctbx/geometry/tests/tst_geometry.py cctbx/geometry_restraints/ cctbx/maptbx/ cctbx/maptbx/boost_python/ cctbx/maptbx/boost_python/tst_maptbx.py cctbx/masks/ cctbx/masks/tests/ cctbx/masks/tests/tst_flood_fill.py cctbx/math/ cctbx/math/boost_python/ cctbx/math/boost_python/tst_math.py cctbx/miller/ cctbx/miller/boost_python/ cctbx/miller/boost_python/tst_miller.py cctbx/multipolar/ cctbx/multipolar/regression/ cctbx/multipolar/regression/tst_multipolar.py cctbx/omz/ cctbx/omz/tst_cod.csh cctbx/regression/ cctbx/sgtbx/ cctbx/sgtbx/boost_python/ cctbx/sgtbx/boost_python/tst_N_fold_rot.py cctbx/sgtbx/boost_python/tst_sgtbx.py cctbx/sgtbx/direct_space_asu/ cctbx/sgtbx/direct_space_asu/proto/ cctbx/sgtbx/direct_space_asu/proto/tst_asu.cpp cctbx/symmetry_search/ cctbx/symmetry_search/tests/ cctbx/symmetry_search/tests/tst_from_map.py cctbx/symmetry_search/tests/tst_goodness_of_symmetry.py cctbx/translation_search/ cctbx/translation_search/boost_python/ cctbx/translation_search/boost_python/tst_translation_search.py cctbx/uctbx/ cctbx/uctbx/boost_python/ cctbx/uctbx/boost_python/tst_crystal_orientation.py cctbx/uctbx/boost_python/tst_uctbx.py cctbx/uctbx/lrl/ cctbx/uctbx/lrl/tst_match_lattices.py cctbx/xray/ cctbx/xray/boost_python/ cctbx/xray/boost_python/tst_f_model.py cctbx/xray/boost_python/tst_targets_fd.py cctbx/xray/boost_python/tst_xray.py cctbx/xray/observations/ cctbx/xray/targets/ sent 437,185 bytes received 1,254 bytes 876,878.00 bytes/sec total size is 2,052,913 speedup is 4.68 building file list ... done cma_es/ sent 117 bytes received 22 bytes 278.00 bytes/sec total size is 3,008 speedup is 21.64 building file list ... done crys3d/regression/ sent 398 bytes received 33 bytes 862.00 bytes/sec total size is 41,841 speedup is 97.08 building file list ... done sent 643 bytes received 12 bytes 436.67 bytes/sec total size is 0 speedup is 0.00 building file list ... done fable/test/ fable/test/tst_command_line.py fable/test/tst_io.py fable/test/tst_separate_files.py fable/test/tst_show_calls.py sent 12,906 bytes received 106 bytes 26,024.00 bytes/sec total size is 151,869 speedup is 11.67 building file list ... done sent 223 bytes received 24 bytes 494.00 bytes/sec total size is 8,108 speedup is 32.83 building file list ... done iotbx/bioinformatics/ iotbx/bioinformatics/test/ iotbx/bioinformatics/test/tst_alignment_as_hsearch.py iotbx/bioinformatics/test/tst_ebi_wu_blast_xml.py iotbx/bioinformatics/test/tst_local_blast.py iotbx/bioinformatics/test/tst_ncbi_blast_xml.py iotbx/ccp4_map/ iotbx/ccp4_map/tst_input.map iotbx/cif/ iotbx/cif/tests/ iotbx/cif/tests/tst_citations.py iotbx/cif/tests/tst_cod.py iotbx/cif/tests/tst_geometry.py iotbx/cif/tests/tst_lex_parse_build.py iotbx/cif/tests/tst_model.py iotbx/cif/tests/tst_model_builder.py iotbx/cif/tests/tst_parser.py iotbx/cif/tests/tst_restraints.py iotbx/cif/tests/tst_ucif_examples_compilation.py iotbx/cif/tests/tst_validation.py iotbx/cns/ iotbx/detectors/ iotbx/dsn6/ iotbx/examples/ iotbx/examples/pdb_truncate_to_ala/ iotbx/examples/pdb_truncate_to_ala/tst.py iotbx/gui_tools/ iotbx/kriber/ iotbx/mtz/ iotbx/pdb/ iotbx/pdb/remediation/ iotbx/regression/ iotbx/regression/ncs/ iotbx/regression/secondary_structure/ iotbx/regression/secondary_structure/tst_annotation.py iotbx/regression/secondary_structure/tst_annotation_long.py iotbx/regression/secondary_structure/tst_sheet.py iotbx/scalepack/ iotbx/shelx/ iotbx/xds/ iotbx/xds/tests/ iotbx/xds/tests/tst_integrate_hkl.py iotbx/xds/tests/tst_spots_xds.py iotbx/xds/tests/tst_xds_inp.py iotbx/xds/tests/tst_xparm.py iotbx/xplor/ sent 274,154 bytes received 933 bytes 550,174.00 bytes/sec total size is 2,418,095 speedup is 8.79 building file list ... done libtbx/phil/ libtbx/queuing_system_utils/ sent 1,351 bytes received 108 bytes 2,918.00 bytes/sec total size is 254,770 speedup is 174.62 building file list ... done mmtbx/atomic_environment_vectors/ mmtbx/building/ mmtbx/building/ligands/ mmtbx/building/ligands/tst_00_mmtbx_building_ligands.map mmtbx/bulk_solvent/ mmtbx/chemical_components/ mmtbx/conformation_dependent_library/ mmtbx/density_modification/ mmtbx/disorder/ mmtbx/dynamics/ mmtbx/geometry/ mmtbx/geometry/tests/ mmtbx/geometry/tests/tst_altloc.py mmtbx/geometry/tests/tst_asa.py mmtbx/geometry/tests/tst_clash.py mmtbx/geometry/tests/tst_indexing.py mmtbx/geometry/tests/tst_shared_types.py mmtbx/geometry/tests/tst_sphere_surface_sampling.py mmtbx/geometry/tests/tst_topology.py mmtbx/geometry_restraints/ mmtbx/geometry_restraints/torsion_restraints/ mmtbx/hydrogens/ mmtbx/ias/ mmtbx/idealized_aa_residues/ mmtbx/ions/ mmtbx/ions/svm/ mmtbx/ligands/ mmtbx/maps/ mmtbx/masks/ mmtbx/masks/tst_mask.cpp mmtbx/max_lik/ mmtbx/monomer_library/ mmtbx/nci/ mmtbx/pair_interaction/ mmtbx/polygon/ mmtbx/probe/ mmtbx/probe/tst_probe.cpp mmtbx/real_space/ mmtbx/reduce/ mmtbx/refinement/ mmtbx/refinement/real_space/ mmtbx/regression/fix_cablam/ mmtbx/regression/fix_cablam/tst_basic_cl_operations.py mmtbx/regression/fix_cablam/tst_insertion_codes.py mmtbx/regression/fix_cablam/tst_one_resid_rotation.py mmtbx/regression/fix_cablam/tst_single_outliers_surroundings.py mmtbx/regression/model/ mmtbx/regression/model_idealization/ mmtbx/regression/model_idealization/tst_ext_map_01.py mmtbx/regression/model_idealization/tst_ligands.py mmtbx/regression/model_idealization/tst_nomap_01.py mmtbx/regression/model_idealization/tst_nomap_02.py mmtbx/regression/model_idealization/tst_nomap_03.py mmtbx/regression/model_idealization/tst_nomap_04.py mmtbx/regression/model_idealization/tst_with_mtz.py mmtbx/regression/model_idealization/tst_withmap_01.py mmtbx/regression/model_idealization/tst_withmap_02.py mmtbx/regression/model_idealization/tst_withmap_03.py mmtbx/regression/model_idealization/tst_withmap_04.py mmtbx/regression/model_idealization/tst_withmap_05.py mmtbx/regression/model_idealization/tst_withmap_06.py mmtbx/regression/mtz/ mmtbx/regression/mtz/tst_xtriage_fmodel.mtz mmtbx/regression/ncs/ mmtbx/regression/pdb_interpretation/ mmtbx/regression/pdb_interpretation/tst_edits.py mmtbx/regression/pdb_interpretation/tst_edits_actions.py mmtbx/regression/pdb_interpretation/tst_using_ncs_1.py mmtbx/regression/pdb_interpretation/tst_using_ncs_2.py mmtbx/regression/real_space_refine_chain/ mmtbx/regression/real_space_refine_chain/tst_00.py mmtbx/regression/real_space_refine_chain/tst_01.py mmtbx/regression/tls/ mmtbx/regression/tncs/ mmtbx/regression/tncs/tst_epsfac_and_radius.py mmtbx/regression/tncs/tst_fd.py mmtbx/regression/tncs/tst_moments.py mmtbx/regression/tncs/tst_pair.py mmtbx/ringer/ mmtbx/rotamer/ mmtbx/rsr/ mmtbx/scaling/ mmtbx/secondary_structure/ mmtbx/secondary_structure/build/ mmtbx/utils/ mmtbx/validation/ mmtbx/validation/regression/ mmtbx/wwpdb/ sent 798,665 bytes received 1,987 bytes 1,601,304.00 bytes/sec total size is 7,210,912 speedup is 9.01 building file list ... done omptbx/ sent 100 bytes received 22 bytes 244.00 bytes/sec total size is 1,175 speedup is 9.63 building file list ... done rstbx/bpcx/ rstbx/bpcx/detector_model/ rstbx/cftbx/ rstbx/diffraction/ rstbx/diffraction/fastbragg/ rstbx/dps_core/ rstbx/indexing/ rstbx/simage/ rstbx/simulation/ rstbx/sublattice_support/ rstbx/viewer/ sent 1,082 bytes received 87 bytes 2,338.00 bytes/sec total size is 179,407 speedup is 153.47 building file list ... done scitbx/array_family/ scitbx/array_family/tst_accessors.cpp scitbx/array_family/tst_af_1.cpp scitbx/array_family/tst_af_2.cpp scitbx/array_family/tst_af_3.cpp scitbx/array_family/tst_af_4.cpp scitbx/array_family/tst_af_5.cpp scitbx/array_family/tst_af_helpers.cpp scitbx/array_family/tst_mat3.cpp scitbx/array_family/tst_optional_copy.cpp scitbx/array_family/tst_rectangular_full_packed.cpp scitbx/array_family/tst_ref_matrix_facet.cpp scitbx/array_family/tst_sym_mat3.cpp scitbx/array_family/tst_unsigned_float_arithmetic.cpp scitbx/array_family/tst_vec3.cpp scitbx/array_family/boost_python/ scitbx/array_family/boost_python/tst_cost_of_m_handle_in_af_shared.py scitbx/array_family/boost_python/tst_flex.py scitbx/array_family/boost_python/tst_flex_argument_passing.py scitbx/array_family/boost_python/tst_integer_offsets_vs_pointers.py scitbx/array_family/boost_python/tst_numpy_bridge.py scitbx/array_family/boost_python/tst_shared.py scitbx/array_family/boost_python/tst_smart_selection.py scitbx/dtmin/ scitbx/dtmin/regression/ scitbx/dtmin/regression/tst_dtmin_basic.py scitbx/dtmin/regression/tst_dtmin_booth.py scitbx/dtmin/regression/tst_dtmin_twisted.py scitbx/error/ scitbx/error/tst_error.cpp scitbx/error/tst_error.py scitbx/fftpack/ scitbx/fftpack/boost_python/ scitbx/fftpack/boost_python/tst_fftpack.py scitbx/fftpack/timing/ scitbx/fftpack/timing/tst3d.cpp scitbx/glmtbx/ scitbx/glmtbx/tests/ scitbx/glmtbx/tests/tst.py scitbx/graph/ scitbx/graphics_utils/ scitbx/iso_surface/ scitbx/iso_surface/tst_iso_surface.m scitbx/lbfgs/ scitbx/lbfgs/tst_lbfgs.cpp scitbx/lbfgsb/ scitbx/lbfgsb/boost_python/ scitbx/lbfgsb/boost_python/tst_fit_cdf.py scitbx/lbfgsb/boost_python/tst_lbfgsb.py scitbx/linalg/ scitbx/linalg/tests/ scitbx/linalg/tests/tst_cholesky.py scitbx/linalg/tests/tst_eigensystem.py scitbx/linalg/tests/tst_lapack_dsyev.py scitbx/linalg/tests/tst_lapack_svd.py scitbx/linalg/tests/tst_matrix.py scitbx/linalg/tests/tst_svd.py scitbx/lstbx/ scitbx/lstbx/tests/ scitbx/lstbx/tests/tst_normal_equations.nb scitbx/math/ scitbx/math/tests/ scitbx/math/tests/tst.cpp scitbx/matrix/ scitbx/matrix/tests/ scitbx/matrix/tests/tst_cholesky.cpp scitbx/matrix/tests/tst_givens.cpp scitbx/matrix/tests/tst_householder.cpp scitbx/matrix/tests/tst_householder.nb scitbx/matrix/tests/tst_householder.py scitbx/matrix/tests/tst_row_echelon.py scitbx/matrix/tests/tst_svd.cpp scitbx/matrix/tests/tst_svd.nb scitbx/matrix/tests/tst_svd_accuracy.nb scitbx/minpack/ scitbx/minpack/tst.py scitbx/python_utils/ scitbx/random/ scitbx/random/tests/ scitbx/random/tests/tst_random.py scitbx/rigid_body/ scitbx/rigid_body/essence/ scitbx/rigid_body/proto/ scitbx/serialization/ scitbx/serialization/tst_base_256.cpp scitbx/sparse/ scitbx/sparse/tests/ scitbx/sparse/tests/tst_lu_factorization.py scitbx/sparse/tests/tst_sparse.cpp scitbx/sparse/tests/tst_sparse.py scitbx/stl/ scitbx/suffixtree/ scitbx/suffixtree/test/ scitbx/suffixtree/test/tst_single.py scitbx/tests/ scitbx/tests/tst_basic.csh scitbx/tests/tst_basic.py scitbx/tests/tst_cubicle_neighbors.py scitbx/tests/tst_genetic_algorithm_with_mp.py scitbx/tests/tst_r3_utils.py scitbx/tests/tst_regular_grid_on_unit_sphere.py scitbx/tests/tst_smoothing.py scitbx/wigner/ sent 675,121 bytes received 1,547 bytes 451,112.00 bytes/sec total size is 1,108,176 speedup is 1.64 building file list ... done sent 152 bytes received 12 bytes 328.00 bytes/sec total size is 0 speedup is 0.00 building file list ... done smtbx/ab_initio/ smtbx/ab_initio/tests/ smtbx/absolute_structure/ smtbx/absolute_structure/tests/ smtbx/absolute_structure/tests/tst_absolute_structure.py smtbx/masks/ smtbx/masks/tests/ smtbx/masks/tests/tst_masks.py smtbx/refinement/ smtbx/refinement/constraints/ smtbx/refinement/constraints/tests/ smtbx/refinement/constraints/tests/tst_geometrical_hydrogens.cpp smtbx/refinement/constraints/tests/tst_reparametrisation.cpp smtbx/refinement/constraints/tests/tst_special_position.cpp smtbx/refinement/restraints/ smtbx/refinement/restraints/tests/ smtbx/refinement/restraints/tests/tst_restraints.py smtbx/refinement/tests/ smtbx/refinement/tests/tst_least_squares.py smtbx/refinement/tests/tst_weighting_schemes.py smtbx/regression/ smtbx/structure_factors/ smtbx/structure_factors/direct/ smtbx/structure_factors/direct/tests/ smtbx/structure_factors/direct/tests/tst_standard_xray.py sent 130,481 bytes received 252 bytes 261,466.00 bytes/sec total size is 208,206 speedup is 1.59 building file list ... done spotfinder/core_toolbox/ spotfinder/core_toolbox/boost_python/ spotfinder/core_toolbox/boost_python/tst_small_image.py sent 5,472 bytes received 37 bytes 11,018.00 bytes/sec total size is 5,074 speedup is 0.92 building file list ... done tbxx/ tbxx/tests/ tbxx/tests/tst_pretty_type_name.cpp sent 495 bytes received 41 bytes 1,072.00 bytes/sec total size is 323 speedup is 0.60 building file list ... done wxtbx/regression/ wxtbx/regression/tst_process_control.py sent 2,007 bytes received 34 bytes 4,082.00 bytes/sec total size is 1,770 speedup is 0.87 building file list ... done ./ annlib_adaptbx/ annlib_adaptbx/tests/ annlib_adaptbx/tests/data.txt annlib_adaptbx/tests/query.txt cma_es/cma/ cma_es/cma/initials.par fable/fem/ fable/fem/major_types.hpp fable/test/sf_times.py fable/test/lenient/ fable/test/lenient/NOTE fable/test/lenient/calling_non_external_arg.f fable/test/lenient/str_blank_str.f fable/test/lenient/str_cont_line_str.f fable/test/semantic_error/ fable/test/semantic_error/assignment_to_parameter.f fable/test/semantic_error/calling_array.f fable/test/semantic_error/calling_dimension.f fable/test/semantic_error/common_equivalence.f fable/test/semantic_error/dimension_unknown_data_type.f fable/test/semantic_error/dims_repeated_in_common.f fable/test/semantic_error/dims_repeated_in_dimension.f fable/test/semantic_error/equivalence_external.f fable/test/semantic_error/external_array.f fable/test/semantic_error/external_common.f fable/test/semantic_error/function_data_type_decl_twice.f fable/test/semantic_error/function_name_is_also_arg.f fable/test/semantic_error/inquire_both_unit_and_file.f fable/test/semantic_error/inquire_no_unit_no_file.f fable/test/semantic_error/intrinsic_common.f fable/test/semantic_error/intrinsic_dimension.f fable/test/semantic_error/missing_include.f fable/test/semantic_error/parameter_array.f fable/test/semantic_error/parameter_in_common.f fable/test/semantic_error/parameter_in_sub_args.f fable/test/semantic_error/parameter_save.f fable/test/semantic_error/real_declared_twice.f fable/test/semantic_error/recursion_in_declaration.f fable/test/semantic_error/sub_fun_2.f fable/test/semantic_error/subroutine_name_is_also_arg.f fable/test/semantic_error/twice_in_sub_args.f fable/test/semantic_error/unknown_intrinsic.f fable/test/semantic_error/write_end.f fable/test/semantic_error/write_without_unit.f fable/test/syntax_error/ fable/test/syntax_error/bad_after_dot.f fable/test/syntax_error/bad_and.f fable/test/syntax_error/bad_complex_literal_1.f fable/test/syntax_error/bad_complex_literal_2.f fable/test/syntax_error/bad_data.f fable/test/syntax_error/bad_false.f fable/test/syntax_error/bad_format_1.f fable/test/syntax_error/bad_format_2.f fable/test/syntax_error/bad_format_3.f fable/test/syntax_error/bad_format_4.f fable/test/syntax_error/bad_format_5.f fable/test/syntax_error/bad_format_6.f fable/test/syntax_error/bad_format_7.f fable/test/syntax_error/bad_gt.f fable/test/syntax_error/bad_implied_do_1.f fable/test/syntax_error/bad_implied_do_2.f fable/test/syntax_error/bad_implied_do_3.f fable/test/syntax_error/bad_implied_do_4.f fable/test/syntax_error/bad_implied_do_5.f fable/test/syntax_error/bad_implied_do_6.f fable/test/syntax_error/bad_not.f fable/test/syntax_error/bad_not_2.f fable/test/syntax_error/bad_open_err_label.f fable/test/syntax_error/bad_or.f fable/test/syntax_error/bad_true.f fable/test/syntax_error/bare_data.f fable/test/syntax_error/bare_external.f fable/test/syntax_error/bare_integer_i.f fable/test/syntax_error/bare_print.f fable/test/syntax_error/closing_parenthesis_without_matching.f fable/test/syntax_error/common_with_data_size.f fable/test/syntax_error/data_plus_repetition.f fable/test/syntax_error/dimension_with_data_size.f fable/test/syntax_error/dot_e.f fable/test/syntax_error/duplicate_format_label.f fable/test/syntax_error/exclamation_mark_syndrome.f fable/test/syntax_error/format_without_label.f fable/test/syntax_error/fun_star.f fable/test/syntax_error/j_assign_i_percent_5.f fable/test/syntax_error/label_cont_char.f fable/test/syntax_error/label_empty.f fable/test/syntax_error/not_an_identifier.f fable/test/syntax_error/opening_parenthesis_without_matching.f fable/test/syntax_error/power_no_base.f fable/test/syntax_error/power_no_exponent.f fable/test/syntax_error/read_plus_name.f fable/test/syntax_error/read_star_comma_empty.f fable/test/syntax_error/read_star_name.f fable/test/syntax_error/save_bad_comma.f fable/test/syntax_error/save_num_comma_colon.f fable/test/syntax_error/save_num_val_colon.f fable/test/syntax_error/save_slash_slash.f fable/test/syntax_error/save_with_dims.f fable/test/syntax_error/sub_bad_comma.f fable/test/syntax_error/sub_bad_trailing.f fable/test/syntax_error/sub_no_name.f fable/test/syntax_error/sub_open_parenthesis.f fable/test/syntax_error/sub_percent_3.f fable/test/syntax_error/x_assign_1dotd.f fable/test/syntax_error/x_assign_1ex.f fable/test/syntax_error/x_assign_dot.f fable/test/syntax_error/x_assign_dot_2.f fable/test/unsupported/ fable/test/unsupported/goto_into_loop.f fable/test/unsupported/hollerith_cont_lines.f fable/test/unsupported/hollerith_with_quotes.f fable/test/unsupported/parameter_pow.f fable/test/valid/ fable/test/valid/add_dp_integer.f fable/test/valid/add_real_integer.f fable/test/valid/add_reals.f fable/test/valid/add_strings.f fable/test/valid/arr_float_2.f fable/test/valid/array_origin.f fable/test/valid/assign_to_array_elements.f fable/test/valid/blockdata_named.f fable/test/valid/blockdata_unnamed.f fable/test/valid/character_1_array_passing.f fable/test/valid/character_1_f90.f fable/test/valid/character_function.f fable/test/valid/character_function_2.f fable/test/valid/character_function_3.f fable/test/valid/combine_decl_1.f fable/test/valid/comments.f fable/test/valid/common_0.f fable/test/valid/common_1.f fable/test/valid/common_2.f fable/test/valid/common_3.f fable/test/valid/common_4.f fable/test/valid/common_equivalence_1.f fable/test/valid/common_equivalence_2.f fable/test/valid/common_equivalence_3.f fable/test/valid/common_equivalence_4.f fable/test/valid/common_equivalence_5.f fable/test/valid/common_equivalence_simple_1.f fable/test/valid/common_equivalence_simple_2.f fable/test/valid/common_equivalence_simple_3.f fable/test/valid/common_equivalence_simple_4.f fable/test/valid/common_equivalence_simple_5.f fable/test/valid/common_equivalence_simple_6.f fable/test/valid/common_name_clash.f fable/test/valid/common_name_clash_2.f fable/test/valid/common_name_clash_3.f fable/test/valid/common_save_members.f fable/test/valid/common_variants.f fable/test/valid/commonymous.f fable/test/valid/const_analysis_1.f fable/test/valid/const_analysis_2.f fable/test/valid/const_expressions.f fable/test/valid/const_expressions_2.f fable/test/valid/conv_recipe.f fable/test/valid/cycle_exit.f fable/test/valid/data_01.f fable/test/valid/data_02.f fable/test/valid/data_03.f fable/test/valid/data_04.f fable/test/valid/data_05.f fable/test/valid/data_06.f fable/test/valid/data_07.f fable/test/valid/data_08.f fable/test/valid/data_09.f fable/test/valid/data_10.f fable/test/valid/data_11.f fable/test/valid/data_12.f fable/test/valid/data_13.f fable/test/valid/data_14.f fable/test/valid/data_15.f fable/test/valid/data_16.f fable/test/valid/data_17.f fable/test/valid/data_18.f fable/test/valid/data_19.f fable/test/valid/data_20.f fable/test/valid/data_21.f fable/test/valid/data_22.f fable/test/valid/data_23.f fable/test/valid/data_24.f fable/test/valid/data_25.f fable/test/valid/data_26.f fable/test/valid/data_27.f fable/test/valid/data_28.f fable/test/valid/data_29.f fable/test/valid/data_30.f fable/test/valid/data_31.f fable/test/valid/data_32.f fable/test/valid/data_byte.f fable/test/valid/data_double_from_double_and_float.f fable/test/valid/data_str_arr.f fable/test/valid/data_type_star.f fable/test/valid/data_types.f fable/test/valid/decl_before_if.f fable/test/valid/dependency_cycle.f fable/test/valid/dim_with_parameter.f fable/test/valid/dimensions.f fable/test/valid/do_enddo.f fable/test/valid/do_ix_num.f fable/test/valid/do_label.f fable/test/valid/do_variable_passed.f fable/test/valid/do_while.f fable/test/valid/doc_data_type_star.f fable/test/valid/double_literal.f fable/test/valid/dp_example.f fable/test/valid/dynamic_parameters_1.f fable/test/valid/dynamic_parameters_2.f fable/test/valid/dynamic_parameters_3.f fable/test/valid/dynamic_parameters_4.f fable/test/valid/dynamic_parameters_5.f fable/test/valid/entry_fun_1.f fable/test/valid/entry_fun_2.f fable/test/valid/entry_sub_1.f fable/test/valid/entry_sub_2.f fable/test/valid/equivalence_01.f fable/test/valid/equivalence_02.f fable/test/valid/equivalence_03.f fable/test/valid/equivalence_04.f fable/test/valid/equivalence_05.f fable/test/valid/equivalence_06.f fable/test/valid/equivalence_07.f fable/test/valid/equivalence_08.f fable/test/valid/equivalence_09.f fable/test/valid/equivalence_10.f fable/test/valid/equivalence_11.f fable/test/valid/equivalence_12.f fable/test/valid/equivalence_data.f fable/test/valid/equivalence_mixed.f fable/test/valid/equivalence_repeated.f fable/test/valid/external_arg_function.f fable/test/valid/external_arg_layers.f fable/test/valid/external_arg_non_const.f fable/test/valid/external_arg_pass_call.f fable/test/valid/external_arg_simple.f fable/test/valid/external_arg_subroutine.f fable/test/valid/f90_ne_token.f fable/test/valid/file_names_and_expected_cout fable/test/valid/flush_external.f fable/test/valid/flush_intrinsic.f fable/test/valid/format_escape.f fable/test/valid/format_nested.f fable/test/valid/format_quote_syndrome.f fable/test/valid/format_str_blank_str.f fable/test/valid/format_used_twice.f fable/test/valid/formats.f fable/test/valid/function_calls_with_its_name_as_arg.f fable/test/valid/function_data_type_in_body.f fable/test/valid/function_no_arg.f fable/test/valid/function_no_arg_with_common_in_expression.f fable/test/valid/function_two_returns_1.f fable/test/valid/function_two_returns_2.f fable/test/valid/function_write.f fable/test/valid/goto_computed.f fable/test/valid/goto_forms.f fable/test/valid/goto_last_do.f fable/test/valid/goto_spaghetti.f fable/test/valid/goto_target_before_else.f fable/test/valid/hexadecimal.f fable/test/valid/hollerith.f fable/test/valid/identifier_prefix.f fable/test/valid/if_arithmetic.f fable/test/valid/if_cond_if_arithmetic.f fable/test/valid/if_else_endif.f fable/test/valid/if_elseif_else_endif.f fable/test/valid/if_endif.f fable/test/valid/if_spaghetti.f fable/test/valid/if_write.f fable/test/valid/implicit_integer_a.f fable/test/valid/implicit_ranges.f fable/test/valid/implied_external_arg_sub.f fable/test/valid/implied_external_arg_sub_2.f fable/test/valid/implied_program.f fable/test/valid/implied_trailing_program.f fable/test/valid/inquire.f fable/test/valid/inquire_opened.f fable/test/valid/int_literal_eq_int_literal.f fable/test/valid/integer_star_2_array.f fable/test/valid/intrinsic_with_data_type.f fable/test/valid/intrinsics_extra.f fable/test/valid/intrinsics_iargc_getarg.f fable/test/valid/intrinsics_legacy.f fable/test/valid/label_format.f fable/test/valid/len_trim.f fable/test/valid/logical_a_or_b.f fable/test/valid/logical_ops.f fable/test/valid/long_lines.f fable/test/valid/main_cmn_indirect.f fable/test/valid/mod_integers.f fable/test/valid/open_chain.f fable/test/valid/open_write_read.f fable/test/valid/open_write_read_2.f fable/test/valid/ops.f fable/test/valid/parameter_for_arg_and_cmn_dim.f fable/test/valid/parameter_n.f fable/test/valid/parameter_save.f fable/test/valid/parameter_save_common.f fable/test/valid/parameters_2.f fable/test/valid/parameters_recursive.f fable/test/valid/parameters_recursive_2.f fable/test/valid/passing_arrays.f fable/test/valid/passing_arrays_2.f fable/test/valid/passing_strings.f fable/test/valid/power.f fable/test/valid/power_2.f fable/test/valid/print.f fable/test/valid/read_end.f fable/test/valid/read_end_empty.f fable/test/valid/read_end_err.f fable/test/valid/read_end_err_star_double.f fable/test/valid/read_err.f fable/test/valid/read_fmt_double.f fable/test/valid/read_fmt_past_end_of_line.f fable/test/valid/read_fmt_real.f fable/test/valid/read_fmt_slash.f fable/test/valid/read_fmt_string.f fable/test/valid/read_fmt_x.f fable/test/valid/read_format.f fable/test/valid/read_implied_do_1.f fable/test/valid/read_iostat_end_err_1.f fable/test/valid/read_iostat_end_err_2.f fable/test/valid/read_iostat_from_file.f fable/test/valid/read_iostat_from_string.f fable/test/valid/read_lines.f fable/test/valid/read_rec_iostat.f fable/test/valid/read_star.f fable/test/valid/read_star_empty.f fable/test/valid/read_star_integer.f fable/test/valid/read_star_print_star.f fable/test/valid/read_test_1.f fable/test/valid/read_test_1_iostat.f fable/test/valid/read_test_2.f fable/test/valid/read_test_3.f fable/test/valid/read_unformatted_str_arr.f fable/test/valid/real_array_sum.f fable/test/valid/recursive_subroutine.f fable/test/valid/rewind.f fable/test/valid/save_0.f fable/test/valid/save_1.f fable/test/valid/save_2.f fable/test/valid/save_3.f fable/test/valid/save_equivalence_1.f fable/test/valid/scopes_1.f fable/test/valid/scopes_2.f fable/test/valid/scopes_3.f fable/test/valid/scopes_4.f fable/test/valid/sf.f fable/test/valid/sign.f fable/test/valid/stop_bare.f fable/test/valid/stop_integer.f fable/test/valid/stop_string.f fable/test/valid/string_array.f fable/test/valid/string_array_declarations.f fable/test/valid/string_assign_to_slice.f fable/test/valid/string_common_dims.f fable/test/valid/string_compare.f fable/test/valid/string_concat.f fable/test/valid/string_spanning_continuation_lines.f fable/test/valid/string_sub_array_passing.f fable/test/valid/strings_size_dim.f fable/test/valid/strings_size_dim_data.f fable/test/valid/sub_fun_1.f fable/test/valid/sub_fun_3.f fable/test/valid/sub_nums_size_capacity.f fable/test/valid/sub_star.f fable/test/valid/subroutine_1.f fable/test/valid/subroutine_2.f fable/test/valid/subroutine_3.f fable/test/valid/subroutine_4.f fable/test/valid/subroutine_5.f fable/test/valid/subroutine_6.f fable/test/valid/subroutine_7.f fable/test/valid/subroutine_8.f fable/test/valid/subroutine_9.f fable/test/valid/subroutine_write_iunit.f fable/test/valid/subroutine_zero.f fable/test/valid/tab_syndrome.f fable/test/valid/triple_3d.f fable/test/valid/triple_3d_common.f fable/test/valid/unformatted_experiments.f fable/test/valid/unused_arg_implicit_none.f fable/test/valid/unused_args.f fable/test/valid/using_intrinsics.f fable/test/valid/write_1.f fable/test/valid/write_err.f fable/test/valid/write_extra_parentheses.f fable/test/valid/write_fmt_double.f fable/test/valid/write_format.f fable/test/valid/write_format_with_colon.f fable/test/valid/write_implied_do_1.f fable/test/valid/write_implied_do_2.f fable/test/valid/write_implied_do_3.f fable/test/valid/write_implied_do_4.f fable/test/valid/write_implied_do_5.f fable/test/valid/write_internal_file.f fable/test/valid/write_internal_file_2.f fable/test/valid/write_internal_file_3.f fable/test/valid/write_internal_file_4.f fable/test/valid/write_pow.f fable/test/valid/write_read_end_err_implied_do.f fable/test/valid/write_read_unformatted.f fable/test/valid/write_star.f fable/test/valid/write_star_real_star_4.f fable/test/valid/write_star_real_star_8.f iotbx/bioinformatics/test/alignment.pir iotbx/bioinformatics/test/ebi_blast.xml.gz iotbx/bioinformatics/test/ncbi_blast.xml.gz iotbx/ccp4_map/ccp4_20_21_22_to_30_40_50.ccp4 iotbx/examples/pdb_truncate_to_ala/crambin_pieces.pdb iotbx/examples/pdb_truncate_to_ala/resname_mix.pdb iotbx/examples/pdb_truncate_to_ala/tutorial.txt iotbx/examples/pdb_truncate_to_ala/v0_getting_started.py iotbx/examples/pdb_truncate_to_ala/v1_loop_over_atoms.py iotbx/examples/pdb_truncate_to_ala/v2_simple.py iotbx/examples/pdb_truncate_to_ala/v3_better.py iotbx/examples/pdb_truncate_to_ala/v4_with_bells_and_whistles.py iotbx/regression/data/ iotbx/regression/data/1yjp.pdb iotbx/regression/data/2ERL.pdb iotbx/regression/data/D7.ccp4 iotbx/regression/data/big_cube_model.pdb iotbx/regression/data/cu3182Isup2.hkl iotbx/regression/data/cu3182sup1.cif iotbx/regression/data/insulin_unmerged_cutted_from_ccp4.mtz iotbx/regression/data/mmma.ccp4 iotbx/regression/data/mmmab.ccp4 iotbx/regression/data/mmmb.ccp4 iotbx/regression/data/non_zero_origin_map.ccp4 iotbx/regression/data/non_zero_origin_model.cif iotbx/regression/data/non_zero_origin_model.pdb iotbx/regression/data/non_zero_origin_model_split.cif iotbx/regression/data/non_zero_origin_model_split.pdb iotbx/regression/data/non_zero_origin_ncs_model.cif iotbx/regression/data/non_zero_origin_ncs_model.pdb iotbx/regression/data/non_zero_origin_ncs_spec.ncs_spec iotbx/regression/data/pdb1zff.ent iotbx/regression/data/phaser_1.mtz iotbx/regression/data/shelx.ins iotbx/xds/tests/INTEGRATE.HKL iotbx/xds/tests/NEW_XPARM.XDS iotbx/xds/tests/XDS.INP iotbx/xds/tests/XDS_2.INP iotbx/xds/tests/XPARM.XDS libtbx/citations.params mmtbx/regression/pdbs/ mmtbx/regression/pdbs/1ucs_cutted_xyz_rounded.pdb mmtbx/regression/pdbs/AF_json_v3.cif mmtbx/regression/pdbs/AF_json_v3.pdb mmtbx/regression/pdbs/Fe_1brf_snip_reduced.pdb mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.cif mmtbx/regression/pdbs/fibronectin_af_ca_1358_1537.pdb mmtbx/regression/pdbs/ligand_before_prot.pdb mmtbx/regression/pdbs/one_chain_ligand_water.pdb mmtbx/regression/pdbs/p9.pdb mmtbx/regression/pdbs/pae.pdb mmtbx/regression/pdbs/pae_model.cif mmtbx/regression/pdbs/pae_model.pdb mmtbx/regression/pdbs/test1.cif mmtbx/regression/pdbs/two_chains_ligand_water.pdb rstbx/indexing/results2.dat rstbx/indexing/si_brief.dat rstbx/indexing/si_synthetic.dat scitbx/array_family/boost_python/regression_test.py scitbx/tests/differential_evolution.py scitbx/tests/direct_search_simulated_annealing.py scitbx/tests/golden_section_search.py scitbx/tests/simplex.py smtbx/regression/test_data/ smtbx/regression/test_data/sucrose_p1.res smtbx/regression/test_data/thpp.cif smtbx/regression/test_data/thpp.hkl smtbx/regression/test_data/thpp.ins sent 5,010,312 bytes received 8,847 bytes 3,346,106.00 bytes/sec total size is 4,944,463 speedup is 0.99 make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_install -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0//usr/lib/x86_64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libcbf-private.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libccp4io.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libcctbx.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libomptbx.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/librstbx.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/tmp/usr/lib/x86_64-linux-gnu/libspotfinder.so.0 debian/tmp/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0//usr/lib/x86_64-linux-gnu/ install -m0755 -d debian/libcctbx-dev//usr cp --reflink=auto -a debian/tmp/usr/include/ debian/libcctbx-dev//usr/ install -m0755 -d debian/libcctbx-dev//usr/lib/x86_64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/x86_64-linux-gnu/libann_adaptor.so debian/tmp/usr/lib/x86_64-linux-gnu/libasymmetric_map.so debian/tmp/usr/lib/x86_64-linux-gnu/libcbf-private.so debian/tmp/usr/lib/x86_64-linux-gnu/libccp4io.so debian/tmp/usr/lib/x86_64-linux-gnu/libcctbx.so debian/tmp/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so debian/tmp/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so debian/tmp/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so debian/tmp/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so debian/tmp/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so debian/tmp/usr/lib/x86_64-linux-gnu/libomptbx.so debian/tmp/usr/lib/x86_64-linux-gnu/librstbx.so debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so debian/tmp/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so debian/tmp/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so debian/tmp/usr/lib/x86_64-linux-gnu/libspotfinder.so debian/libcctbx-dev//usr/lib/x86_64-linux-gnu/ install -m0755 -d debian/python3-cctbx//usr cp --reflink=auto -a debian/tmp/usr/bin debian/python3-cctbx//usr/ install -m0755 -d debian/python3-cctbx//usr/lib cp --reflink=auto -a debian/tmp/usr/lib/cctbx debian/tmp/usr/lib/python3.12 debian/python3-cctbx//usr/lib/ dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/copyright debian/libcctbx0/usr/share/doc/libcctbx0/copyright install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/copyright debian/libcctbx-dev/usr/share/doc/libcctbx-dev/copyright install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/copyright debian/python3-cctbx/usr/share/doc/python3-cctbx/copyright dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/libcctbx-dev/usr/share/doc/libcctbx-dev install -p -m0644 debian/.debhelper/generated/libcctbx-dev/dh_installchangelogs.dch.trimmed debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/libcctbx-dev/usr/share/doc/libcctbx-dev/changelog install -m0755 -d debian/python3-cctbx/usr/share/doc/python3-cctbx install -p -m0644 debian/.debhelper/generated/python3-cctbx/dh_installchangelogs.dch.trimmed debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/python3-cctbx/usr/share/doc/python3-cctbx/changelog install -m0755 -d debian/libcctbx0/usr/share/doc/libcctbx0 install -p -m0644 debian/.debhelper/generated/libcctbx0/dh_installchangelogs.dch.trimmed debian/libcctbx0/usr/share/doc/libcctbx0/changelog.Debian install -p -m0644 ./CHANGELOG.rst debian/libcctbx0/usr/share/doc/libcctbx0/changelog dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20241024 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.12 (default=3.12) D: dh_python3 debhelper:166: skipping package libcctbx0 (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:166: skipping package libcctbx-dev (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:174: source=cctbx, binary packages=['python3-cctbx'] D: dh_python3 dh_python3:205: processing package python3-cctbx... D: dh_python3 fs:50: moving files from debian/python3-cctbx/usr/lib/python3.12/dist-packages to debian/python3-cctbx/usr/lib/python3/dist-packages/ D: dh_python3 tools:231: invoking: /usr/bin/python3.12 -c 'import sysconfig as s; print("__SEP__".join(i or "" for i in s.get_config_vars("SOABI", "MULTIARCH", "INCLUDEPY", "LIBPL", "LDLIBRARY")))' I: dh_python3 fs:421: renaming rstbx_simage_ext.so to rstbx_simage_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_scaling_ext.so to mmtbx_scaling_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_flumpy.so to dxtbx_flumpy.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_math_ext.so to cctbx_math_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_orientation_ext.so to cctbx_orientation_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_pair_interaction_ext.so to mmtbx_pair_interaction_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_fftpack_ext.so to scitbx_fftpack_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_simulation_ext.so to rstbx_simulation_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_symmetry_constraints_ext.so to rstbx_symmetry_constraints_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_pdb_ext.so to iotbx_pdb_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_ext.so to boost_adaptbx_graph_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_ext.so to dxtbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_chemical_elements_ext.so to cctbx_eltbx_chemical_elements_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_adp_restraints_ext.so to cctbx_adp_restraints_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming annlib_ext.so to annlib_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_geometry_ext.so to cctbx_geometry_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_xray_ext.so to cctbx_xray_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_ab_initio_ext.so to smtbx_ab_initio_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_detectors_ext.so to iotbx_detectors_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_r3_utils_ext.so to scitbx_r3_utils_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming fable_ext.so to fable_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_bulk_solvent_ext.so to mmtbx_bulk_solvent_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_min_cut_max_flow_ext.so to boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_statistics_ext.so to cctbx_statistics_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_xray_observations_ext.so to cctbx_xray_observations_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_format_image_ext.so to dxtbx_format_image_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_rsr_ext.so to mmtbx_rsr_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_fp_fdp_ext.so to cctbx_eltbx_fp_fdp_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_icsd_radii_ext.so to cctbx_eltbx_icsd_radii_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_shared_types_ext.so to mmtbx_geometry_shared_types_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_symmetry_search_ext.so to cctbx_symmetry_search_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_validation_ramachandran_ext.so to mmtbx_validation_ramachandran_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_cif_ext.so to iotbx_cif_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_vector_ext.so to scitbx_stl_vector_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_bandpass_ext.so to rstbx_bandpass_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_breadth_first_search_ext.so to boost_adaptbx_graph_breadth_first_search_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_henke_ext.so to cctbx_eltbx_henke_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_multipolar_ext.so to cctbx_multipolar_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_shelx_ext.so to iotbx_shelx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_restraints_ext.so to smtbx_refinement_restraints_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_translation_search_ext.so to cctbx_translation_search_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_geometry_restraints_ext.so to cctbx_geometry_restraints_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_covalent_radii_ext.so to cctbx_eltbx_covalent_radii_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_asymmetric_map_ext.so to cctbx_asymmetric_map_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_map_ext.so to scitbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_iso_surface_ext.so to scitbx_iso_surface_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_stl_set_ext.so to scitbx_stl_set_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_array_family_flex_ext.so to cctbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_pdb_hierarchy_ext.so to iotbx_pdb_hierarchy_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_ext.so to rstbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_sgtbx_asu_ext.so to cctbx_sgtbx_asu_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_graphics_utils_ext.so to scitbx_graphics_utils_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_scalepack_ext.so to iotbx_scalepack_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_building_loop_closure_ext.so to mmtbx_building_loop_closure_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_adptbx_ext.so to cctbx_adptbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_wildcard_ext.so to iotbx_wildcard_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_anharmonic_ext.so to cctbx_anharmonic_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_den_restraints_ext.so to mmtbx_den_restraints_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_array_family_shared_ext.so to scitbx_array_family_shared_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_stl_map_ext.so to smtbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming omptbx_ext.so to omptbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_rational_ext.so to boost_rational_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_suffixtree_shared_ext.so to scitbx_suffixtree_shared_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_french_wilson_ext.so to cctbx_french_wilson_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_sphere_surface_sampling_ext.so to mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_clustering_algorithm_ext.so to boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lbfgsb_ext.so to scitbx_lbfgsb_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_primitive_ext.so to mmtbx_geometry_primitive_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_hydrogens_ext.so to mmtbx_hydrogens_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_tuple_ext.so to boost_tuple_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_array_family_ext.so to smtbx_array_family_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_clash_ext.so to mmtbx_geometry_clash_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming ccp4io_adaptbx_ext.so to ccp4io_adaptbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_minpack_ext.so to scitbx_minpack_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_glmtbx_ext.so to scitbx_glmtbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_array_family_flex_ext.so to spotfinder_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_least_squares_ext.so to smtbx_refinement_least_squares_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_indexing_api_ext.so to rstbx_indexing_api_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_connected_component_algorithm_ext.so to boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cma_es_ext.so to cma_es_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ncs_cartesian_restraints_ext.so to mmtbx_ncs_cartesian_restraints_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_python_streambuf_test_ext.so to boost_adaptbx_python_streambuf_test_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_dmtbx_ext.so to cctbx_dmtbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_crystal_ext.so to cctbx_crystal_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_indexing_ext.so to mmtbx_geometry_indexing_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_array_family_flex_ext.so to scitbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_dtrek_ext.so to iotbx_dtrek_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_maptbx_ext.so to cctbx_maptbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_quadrics_ext.so to gltbx_quadrics_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_rigid_body_ext.so to scitbx_rigid_body_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_sgtbx_ext.so to cctbx_sgtbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_xray_scattering_ext.so to cctbx_eltbx_xray_scattering_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_masking_ext.so to dxtbx_masking_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_sparse_ext.so to scitbx_sparse_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_random_ext.so to scitbx_random_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ramachandran_restraints_ext.so to mmtbx_ramachandran_restraints_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_math_ext.so to scitbx_math_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_util_ext.so to gltbx_util_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_mtz_ext.so to iotbx_mtz_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_array_family_flex_ext.so to rstbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_ccp4_map_ext.so to iotbx_ccp4_map_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_wigner_ext.so to scitbx_wigner_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_utils_ext.so to mmtbx_tls_utils_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lbfgs_ext.so to scitbx_lbfgs_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_dssp_ext.so to mmtbx_dssp_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_ncs_ext.so to mmtbx_ncs_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_covariance_ext.so to cctbx_covariance_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_secondary_structure_ext.so to mmtbx_secondary_structure_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_wavelengths_ext.so to cctbx_eltbx_wavelengths_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_suffixtree_single_ext.so to scitbx_suffixtree_single_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_python_meta_ext.so to boost_python_meta_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_diffraction_fastbragg_ext.so to rstbx_diffraction_fastbragg_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_miller_ext.so to cctbx_miller_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_graph_structure_comparison_ext.so to boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_viewer_utils_ext.so to gltbx_viewer_utils_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_masks_ext.so to cctbx_masks_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_decompose_ext.so to mmtbx_tls_decompose_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_maximum_clique_ext.so to boost_adaptbx_graph_maximum_clique_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_format_nexus_ext.so to dxtbx_format_nexus_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_integration_ext.so to rstbx_integration_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_hough_ext.so to spotfinder_hough_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_probe_ext.so to mmtbx_probe_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_detectors_bruker_ext.so to iotbx_detectors_bruker_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_ext.so to mmtbx_tls_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_geometry_asa_ext.so to mmtbx_geometry_asa_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_lstbx_normal_equations_ext.so to scitbx_lstbx_normal_equations_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_gl_ext.so to gltbx_gl_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_glu_ext.so to gltbx_glu_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_uctbx_ext.so to cctbx_uctbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_utility_ext.so to boost_adaptbx_graph_utility_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_max_lik_ext.so to mmtbx_max_lik_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_xplor_ext.so to iotbx_xplor_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_model_ext.so to dxtbx_model_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_linalg_ext.so to scitbx_linalg_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_refinement_constraints_ext.so to smtbx_refinement_constraints_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming iotbx_dsn6_map_ext.so to iotbx_dsn6_map_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming regression_test_ext.so to regression_test_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming std_pair_ext.so to std_pair_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_graph_metric_ext.so to boost_adaptbx_graph_metric_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_tiny_pse_ext.so to cctbx_eltbx_tiny_pse_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_dxtbx_ext.so to spotfinder_dxtbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming spotfinder_distltbx_ext.so to spotfinder_distltbx_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_attenuation_coefficient_ext.so to cctbx_eltbx_attenuation_coefficient_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_reduce_ext.so to mmtbx_reduce_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_dynamics_ext.so to mmtbx_dynamics_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_neutron_ext.so to cctbx_eltbx_neutron_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_reference_coordinate_ext.so to mmtbx_reference_coordinate_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_optional_ext.so to boost_optional_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_utils_ext.so to mmtbx_utils_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_merging_ext.so to cctbx_merging_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_alignment_ext.so to mmtbx_alignment_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming rstbx_bpcx_detector_model_ext.so to rstbx_bpcx_detector_model_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_python_hybrid_times_ext.so to boost_python_hybrid_times_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_f_model_ext.so to mmtbx_f_model_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_eltbx_sasaki_ext.so to cctbx_eltbx_sasaki_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming smtbx_structure_factors_direct_ext.so to smtbx_structure_factors_direct_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_tls_optimise_amplitudes_ext.so to mmtbx_tls_optimise_amplitudes_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming boost_adaptbx_boost_thread_test_ext.so to boost_adaptbx_boost_thread_test_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_masks_ext.so to mmtbx_masks_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming gltbx_fonts_ext.so to gltbx_fonts_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_emma_ext.so to cctbx_emma_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming determine_unit_cell_ext.so to determine_unit_cell_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_mosaic_ext.so to mmtbx_mosaic_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming mmtbx_rotamer_fit_ext.so to mmtbx_rotamer_fit_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cbflib_ext.so to cbflib_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming cctbx_maptbx_bcr_bcr_ext.so to cctbx_maptbx_bcr_bcr_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming scitbx_cubicle_neighbors_ext.so to scitbx_cubicle_neighbors_ext.cpython-312-x86_64-linux-gnu.so I: dh_python3 fs:421: renaming dxtbx_imageset_ext.so to dxtbx_imageset_ext.cpython-312-x86_64-linux-gnu.so D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.sweep_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_training): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.py_compile_all): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.insert_write_at_start_of_each_procedure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_all_on_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.index): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fmodel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.quantum_interface): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_source_files_sorted_by_size): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.pdflatex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.nested_cpp_loops_with_check_signals): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.create): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.explore_completeness): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.cout): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.qttbx.view_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_available_slots): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_residue_in_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.build_phil_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_tests): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_host_and_user): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.biomt_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_as_xyz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.sort_atoms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_puckers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.split_data_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mask): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.altloc_remediate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.model_vs_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fake_f_obs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.nonbonded_overlaps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_box): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.signal_strength): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_accumulation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_ends_with): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.depends_on): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clean_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_process): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.inspect_r_free_flags): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xmanip): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.cod_select_and_pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.models_as_chains): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.unicode_examples): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.double_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.tst_memory): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.check_libcpp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.remove_outliers): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.validate_ligands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.structure_factor_timings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz2map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_mac_app): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.segmentation_fault): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.patterson_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_regression.test_nightly): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_matching_images): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reindex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.polder): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.lattice_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cns_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.anomalous_differences_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.any2unix): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.validation_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_pickled_function): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.dtrace): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.reduce2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_correlation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bootstrap): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sisa): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.blast_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.estimate_bijvoet_ratio): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_sizes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.matthews): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mon_lib_cif_triage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fem): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bibtex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cbf_read): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.csh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.getting_started): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.latex): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_does_not_contain_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image2pickle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_cablam_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_modules): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.example_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_windows_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.chunk): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.git_avoid_merges): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maps): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.display_parallax_correction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.crystal_symmetry_from_any): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.printenv): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.resolution): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.join): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.show_platform_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.install_format): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.water_b_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.hbond): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.bfactor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_registry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_unzipsfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.merging_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_peaks_holes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_tls_groups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.debug_memory): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.xplor.map.show_summary): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.try_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remote_processing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.box_around_molecule): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.r_factor_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.symmetry_search): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.refresh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.gdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.epydoc_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.tcsh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.seconds_since_the_epoch): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sh): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.select_best_starting_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.transfer_crystal_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.data_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.csv_as_mtz): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx_blobs): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_sphinx_html): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.qscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.brehm_diederichs): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.show_calls): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.split): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.probescore_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.dump_as_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.extract_code_from_txt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.hydrogenate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.export_scalepack_unmerged): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bundle_as_exe): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.gcd): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.eltbx.show_fp_fdp): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.overload): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_model_histogram): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ribbons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_under_build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_mask_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_as_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.maximum_entropy_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.xtriage_gui): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.resource_monitor_plot): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.prime_factors_of): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_old_style_classes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.show_connectivity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/sphinx.build): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.plot_detector_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_module_dependencies): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.wait_for_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.simple_map_coefficients): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rebuild_rotarama_cache): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prune_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.benchmark_refinement): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.join_fragment_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_date_and_time): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_remediator): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_include_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.electrons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.segment_and_split_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.start_binary_bundle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.file_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.verify_mon_lib_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cif_as_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_untested): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.precession_view): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numpy_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.web.install): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_not_show_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.add_from_future_import_division): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.env_run): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.find_reticular_twin_laws): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_bonds): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rotalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.insert_scale_records): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_selfx): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.auto_sharpen): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.HKLinfo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.configure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbf.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dev.dxtbx.read_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.easy_qsub): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.raise_exception_for_testing): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.sge_qstat_counts): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.masks): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.omegalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.unpack_in_sources): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.tls_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.absolute_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.visualize_r_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.reflection_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.parallel_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cxi.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports_crude): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.run_tests_parallel): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cma_es.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_atom_selection): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.density_modification): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_r_factors_by_shell): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.explore_metric_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_commands): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.compare_datasets): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.helix_sheet_recs_as_pdb_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_pythonpath): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/labelit.png): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.r_free_flags_completion_simple): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/annlib.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.get_pubmed_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.link_as_geometry_restraints_edits): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.inexact): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_pdb_mmcif_problems): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.b_factor_stats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate_suites): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.plot_anomalous_scattering): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.arginine_geometry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_numeric_version): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.lcm): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_file_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.dlsnxs2cbf): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_tree): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.process_predicted_model): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.xtriage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_clutter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.geometry_minimization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.scons): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_variable_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rank_scale_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.hierarchy): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dtrek.to_cns): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.table_one): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.euclidean_model_matching): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_reserved_names): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.diffuse): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.make_install_HKLviewer_ChimeraX): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_miller_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.reflection_file_editor): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_full_command_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ss_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_cctbx_bundle_for_installer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.super): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_number_of_processors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_python_sys_executable): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.apply_ncs_to_ligand): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.mtz.dump): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_exp_times): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.create_install_script_bat): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cc_star): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_build_options): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.print_sequence): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.nequal): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.emma): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.split_models): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cif.as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.int_overflow): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.cns.sdb_reader): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phasertng.HKLviewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.remove_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.solver): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_restraints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.print_header): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.massage_data): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.kinemage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_centers_of_mass): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.emringer_score): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.f000): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wxpython): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.distance_difference): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.apply_tapenade_hints): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_as_fasta): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.radial_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.mp_geo): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.comparama): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.form_factor_query): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.chiral_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/crys3d.model_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_repository_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser2_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rama_z): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.help): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_systematic_absences): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.show_matching_formats): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb_cif_conversion): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.french_wilson): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.shelx.as_cif): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.secondary_structure_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.add_conformations): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.refine_anomalous_substructure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_environ_usage): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.search_pdb_symmetry): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb_labels_diff): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fab_elbow_angle): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.distance_least_squares): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.valgrind): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.phil): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/scitbx.generate_error_h): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_vs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_interpretation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.rigid_bond_test): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.development.aev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cbflib.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reflection_file_converter): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.poscar_as_xray_structure): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.reciprocal_space_arrays): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/ccp4io.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.subgroups): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.find_distances): cannot parse binary file D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.ramalyze): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.show_dist_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.list_files): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.space_group_info): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.clear_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/rstbx.simage.wx_display): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/spotfinder.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.saturation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.sort_hetatms): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.real_space_diff_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.get_citation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.dano_as_amplitudes): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fft): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/samosa.scale): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.show_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/gltbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.dynamics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.superpose_atoms_by_name): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.mp_spotfinder_server_read_file): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/wxtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fobs_minus_fobs_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost_adaptbx.divide_by_zero): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.molprobity): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_env): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.perigee): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.ringer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_model_distances): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.fem_include_search_paths): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.make_dist): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdbtools): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.thin_client): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.barbed_wire_analysis): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.line_count): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/fable.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.suitename): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.cablam): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.rna_validate): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.anom_refine): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.analyse_code_comments): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/iotbx.pdb.flip_symmetric_amino_acids): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.image_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/boost.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_to_structure_factors): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_lib_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.install_conda): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_bin_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.loggraph): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/omptbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.import_all_ext): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.show_but_no_repr): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.plan_sad_experiment): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.image_average): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.cbetadev): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.unique_with_biomt): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.feature_enhanced_map): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.validate_H): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.probe2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.clashscore2): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.model_idealization): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/serialtbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.holton_geometry_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.detector_superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.grow_density): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.map_comparison): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.wavelength_units): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.exec): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.undowser_validation): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.path_utility): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/distl.find_active_area): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.pdb.mtrix_reconstruction): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_in_repositories): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.fetch_pdb): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.prepare_pdb_deposition): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/smtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.superpose): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/molprobity.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.bash): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.python): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.show_build_path): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.assert_stdin_contains_strings): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/libtbx.find_unused_imports): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/mmtbx.pdb_statistics): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/phenix.suitename_old): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/cctbx.multiplicity_viewer): doesn't look like a shebang: #! /bin/sh D: dh_python3 tools:101: fix_shebang (debian/python3-cctbx/usr/bin/dxtbx.any2nexus): doesn't look like a shebang: #! /bin/sh D: dh_python3 fs:338: package python3-cctbx details = {'requires.txt': {'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/requires.txt'}, 'egg-info': {'debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx-3.21.1.egg-info/PKG-INFO', 'debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx-2023.12.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.12')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-cctbx D: dh_python3 pydist:175: trying to find dependency for PIL (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for h5py (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:277: dependency: included in build-deps with limits D: dh_python3 pydist:175: trying to find dependency for hdf5plugin (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for matplotlib (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for mrcfile (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for natsort (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for numpy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for nxmx (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for ordered_set (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pint (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for procrunner (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pymol (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for requests (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for scipy (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for six (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for tqdm (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for wxPython (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-wxgtk4.0', 'python3-natsort', 'python3-pint', 'python3-nxmx', 'python3 (>= 3.12~)', 'python3-procrunner', 'python3-six', 'python3-pil', 'python3-h5py (>= 3)', 'python3-pymol', 'python3-hdf5plugin', 'python3:any', 'python3-requests', 'python3-mrcfile', 'python3-tqdm', 'python3-ordered-set', 'python3 (<< 3.13)', 'python3-numpy', 'python3-matplotlib', 'python3-scipy'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild install -m0755 -d debian/python3-cctbx/usr/share/lintian/overrides install -p -m0644 debian/python3-cctbx.lintian-overrides debian/python3-cctbx/usr/share/lintian/overrides/python3-cctbx dh_perl -O--buildsystem=pybuild rm -f debian/libcctbx-dev.debhelper.log debian/libcctbx0.debhelper.log debian/python3-cctbx.debhelper.log debian/rules override_dh_link make[1]: Entering directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_auto_build -- -s custom --build-args="dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" pybuild --build -i python{version} -p 3.12 -s custom "--build-args=dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python{version}/include" I: pybuild base:311: dh_link -p libcctbx-dev usr/include/cctbx usr/lib/cctbx/python3.12/include rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx.so ln -s libcctbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libccp4io.so ln -s libccp4io.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libccp4io.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libspotfinder.so ln -s libspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libspotfinder.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libomptbx.so ln -s libomptbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libomptbx.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/librstbx.so ln -s librstbx.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/librstbx.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcbf-private.so ln -s libcbf-private.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcbf-private.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so ln -s libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so ln -s libiotbx_mtz.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so ln -s libscitbx_boost_python.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so ln -s libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so ln -s libscitbx_slatec.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libann_adaptor.so ln -s libann_adaptor.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libann_adaptor.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libasymmetric_map.so ln -s libasymmetric_map.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libasymmetric_map.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so ln -s libiotbx_pdb.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so ln -s libdxtbxspotfinder.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so ln -s libmmtbx_tls.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so ln -s libmmtbx_masks.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so ln -s libiotbx_xplor.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so rm -f debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so ln -s libscitbx_minpack.so.0.0.1 debian/libcctbx-dev/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so install -m0755 -d debian/libcctbx-dev/usr/lib/cctbx/python3.12 rm -f debian/libcctbx-dev/usr/lib/cctbx/python3.12/include ln -s ../../../include/cctbx debian/libcctbx-dev/usr/lib/cctbx/python3.12/include make[1]: Leaving directory '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_strip_nondeterminism -O--buildsystem=pybuild Using 1727806352 as canonical time Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ncbi_blast.xml.gz using File::StripNondeterminism::handlers::gzip Normalizing debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx/bioinformatics/test/ebi_blast.xml.gz using File::StripNondeterminism::handlers::gzip dh_compress -O--buildsystem=pybuild cd debian/libcctbx-dev cd debian/libcctbx0 cd debian/python3-cctbx chmod a-x usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian chmod a-x usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian chmod a-x usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian gzip -9nf usr/share/doc/python3-cctbx/changelog usr/share/doc/python3-cctbx/changelog.Debian gzip -9nf usr/share/doc/libcctbx-dev/changelog usr/share/doc/libcctbx-dev/changelog.Debian gzip -9nf usr/share/doc/libcctbx0/changelog usr/share/doc/libcctbx0/changelog.Debian cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' cd '/build/reproducible-path/cctbx-2024.8+ds2+~3.21.1+ds1' dh_fixperms -O--buildsystem=pybuild find debian/libcctbx-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-cctbx ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx0 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libcctbx-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx0/usr/share/doc -type f -a -true -a ! -regex 'debian/libcctbx0/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libcctbx-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libcctbx0/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libcctbx-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/python3-cctbx/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-cctbx/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-cctbx/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-cctbx/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-cctbx/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/libcctbx0/usr/lib/debug/.dwz/x86_64-linux-gnu/libcctbx0.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/libcctbx0.debug -- debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 install -m0755 -d debian/python3-cctbx/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/python3-cctbx/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-cctbx.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-cctbx.debug -- debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.find_distances debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-x86_64-linux-gnu.so objcopy --compress-debug-sections debian/libcctbx0/usr/lib/debug/.dwz/x86_64-linux-gnu/libcctbx0.debug chmod 0644 -- debian/libcctbx0/usr/lib/debug/.dwz/x86_64-linux-gnu/libcctbx0.debug objcopy --compress-debug-sections debian/python3-cctbx/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-cctbx.debug chmod 0644 -- debian/python3-cctbx/usr/lib/debug/.dwz/x86_64-linux-gnu/python3-cctbx.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a3 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a3/38e34546e26d9154b9cc1f83841c135cb455a5.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a3/38e34546e26d9154b9cc1f83841c135cb455a5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/a3/38e34546e26d9154b9cc1f83841c135cb455a5.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b4 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b4/3d97b51f999a9508ee1b4e0ca73454864e451a.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b4/3d97b51f999a9508ee1b4e0ca73454864e451a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/b4/3d97b51f999a9508ee1b4e0ca73454864e451a.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9e objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9e/1d28b021c41b09549ad1dda5c83c9dbbd4353b.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9e/1d28b021c41b09549ad1dda5c83c9dbbd4353b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/9e/1d28b021c41b09549ad1dda5c83c9dbbd4353b.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f0/28887bce3c12e568a7beb873821c0febfe5ac8.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f0/28887bce3c12e568a7beb873821c0febfe5ac8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f0/28887bce3c12e568a7beb873821c0febfe5ac8.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/35/c0089167d8c8d36fbc4af570342819cab52b08.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/e9fb21574ce485a7ccf534464fcef52044b42f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/e9fb21574ce485a7ccf534464fcef52044b42f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/e9fb21574ce485a7ccf534464fcef52044b42f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/4d84502af46388db819f40756bfc8bece5555f.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/35/c0089167d8c8d36fbc4af570342819cab52b08.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/35/c0089167d8c8d36fbc4af570342819cab52b08.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/4d84502af46388db819f40756bfc8bece5555f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/07/4d84502af46388db819f40756bfc8bece5555f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/06 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/06/b76c457b52c6cfb0c5fb114c7c3fb96d9e350a.debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/e0fb447434a8fa79be7d8a11715ea13bc10e74.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/06/b76c457b52c6cfb0c5fb114c7c3fb96d9e350a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/06/b76c457b52c6cfb0c5fb114c7c3fb96d9e350a.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/bb objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/bb/983969c55d975cf4dfb3a5f5e21eb82cf6b6a7.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/bb/983969c55d975cf4dfb3a5f5e21eb82cf6b6a7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/bb/983969c55d975cf4dfb3a5f5e21eb82cf6b6a7.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/15 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/15/819672b01704a036cf613dd47eea8f580a2100.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/15/819672b01704a036cf613dd47eea8f580a2100.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/15/819672b01704a036cf613dd47eea8f580a2100.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/af objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/af/52dcbcd8a40aa36929700140b66e3a70218642.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/af/52dcbcd8a40aa36929700140b66e3a70218642.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/af/52dcbcd8a40aa36929700140b66e3a70218642.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ce objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ce/096fc968d0786363ea14f880fd8ffebc52c997.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ce/096fc968d0786363ea14f880fd8ffebc52c997.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/ce/096fc968d0786363ea14f880fd8ffebc52c997.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fa objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fa/9413602d746b0a7c250c9869dfe43f0146324b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/e0fb447434a8fa79be7d8a11715ea13bc10e74.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/11/e0fb447434a8fa79be7d8a11715ea13bc10e74.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/3d69fcf36ccdc7ba3082b0f7f3373bba68157f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/3d69fcf36ccdc7ba3082b0f7f3373bba68157f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b6/3d69fcf36ccdc7ba3082b0f7f3373bba68157f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/f9daafec467d299b14ee89f94ed83884a8e0d6.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fa/9413602d746b0a7c250c9869dfe43f0146324b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/f9daafec467d299b14ee89f94ed83884a8e0d6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0e/f9daafec467d299b14ee89f94ed83884a8e0d6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/fa/9413602d746b0a7c250c9869dfe43f0146324b.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7f/8d20d6bf541c6dea2f580acbea4950a73d2b07.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/13 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/13/3cc5b91f3260e31e0e59e683f111e5510ce112.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7f/8d20d6bf541c6dea2f580acbea4950a73d2b07.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7f/8d20d6bf541c6dea2f580acbea4950a73d2b07.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-x86_64-linux-gnu.so chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/13/3cc5b91f3260e31e0e59e683f111e5510ce112.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/13/3cc5b91f3260e31e0e59e683f111e5510ce112.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/f20cd430a6576b620dba96847faee0e56f992f.debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f7 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f7/71be8190a406abd4b0674a551831e42e2ffb41.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f7/71be8190a406abd4b0674a551831e42e2ffb41.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/f7/71be8190a406abd4b0674a551831e42e2ffb41.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/06f33f518b4449fe00c08247b9fef594a6d2b8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/f20cd430a6576b620dba96847faee0e56f992f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/f20cd430a6576b620dba96847faee0e56f992f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/3af8670ed4a823547a4663a9875ed2a2ab0b50.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/06f33f518b4449fe00c08247b9fef594a6d2b8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/cf/06f33f518b4449fe00c08247b9fef594a6d2b8.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/57 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/57/a676e3e831e612d4e54b5527472847d87adcfe.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/57/a676e3e831e612d4e54b5527472847d87adcfe.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/57/a676e3e831e612d4e54b5527472847d87adcfe.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/1a objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/1a/c72328f3b075df3ef0913770edd278f8429459.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/1a/c72328f3b075df3ef0913770edd278f8429459.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/1a/c72328f3b075df3ef0913770edd278f8429459.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/26 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/26/f81818d18620e489656a7f7093fa7aca249508.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/26/f81818d18620e489656a7f7093fa7aca249508.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/26/f81818d18620e489656a7f7093fa7aca249508.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/01 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/01/4814180cbe53261cd586a053cb31f69b5d341b.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/01/4814180cbe53261cd586a053cb31f69b5d341b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/01/4814180cbe53261cd586a053cb31f69b5d341b.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/07 objcopy --only-keep-debug --compress-debug-sections debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/07/b52daae1f4a95753092e3fc56eac0619a2599f.debug chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/07/b52daae1f4a95753092e3fc56eac0619a2599f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 objcopy --add-gnu-debuglink debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.build-id/07/b52daae1f4a95753092e3fc56eac0619a2599f.debug debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libcctbx0/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/libcctbx0/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/libcctbx0/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libcctbx0/usr/lib/debug install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc ln -s libcctbx0 debian/.debhelper/libcctbx0/dbgsym-root/usr/share/doc/libcctbx0-dbgsym install -m0755 -d debian/.debhelper/libcctbx0 chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/3af8670ed4a823547a4663a9875ed2a2ab0b50.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/65/3af8670ed4a823547a4663a9875ed2a2ab0b50.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/fafbf25e3aaaba547a2ed649399e627eb4752c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/fafbf25e3aaaba547a2ed649399e627eb4752c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2d/fafbf25e3aaaba547a2ed649399e627eb4752c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c9 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c9/a218410e6e9709585e215ddc26fc6ca41e6cc1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c9/a218410e6e9709585e215ddc26fc6ca41e6cc1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c9/a218410e6e9709585e215ddc26fc6ca41e6cc1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/a87ad73155bfc78b5066da816f565b051e1183.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/a87ad73155bfc78b5066da816f565b051e1183.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/a87ad73155bfc78b5066da816f565b051e1183.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/e7e1c650125e522203d429b78b9ada20aef6e9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/e7e1c650125e522203d429b78b9ada20aef6e9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a6/e7e1c650125e522203d429b78b9ada20aef6e9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/830c1aaa8a3a9b7b46864dce083a60c873d91e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/830c1aaa8a3a9b7b46864dce083a60c873d91e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/830c1aaa8a3a9b7b46864dce083a60c873d91e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/f5415c3b832e3b15d1ea0f2404225da134fdb7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/f5415c3b832e3b15d1ea0f2404225da134fdb7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/61/f5415c3b832e3b15d1ea0f2404225da134fdb7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/41d35cbe77bb840080de1ba7949b1b581b3d44.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/41d35cbe77bb840080de1ba7949b1b581b3d44.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/15/41d35cbe77bb840080de1ba7949b1b581b3d44.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/ae4d984bbae953a58fef2c918554d83f813b21.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/ae4d984bbae953a58fef2c918554d83f813b21.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/ae4d984bbae953a58fef2c918554d83f813b21.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0d84913c5a53c0bfd88c51bc98af5ed37412bd.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0d84913c5a53c0bfd88c51bc98af5ed37412bd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/90/0d84913c5a53c0bfd88c51bc98af5ed37412bd.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/d1f099ba23242f6b3be712e99b1f2abc2a6408.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/d1f099ba23242f6b3be712e99b1f2abc2a6408.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/d1f099ba23242f6b3be712e99b1f2abc2a6408.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/02 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/02/da8f6bf4db153e3573d6c3fa5ac19c9ecd2fef.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/02/da8f6bf4db153e3573d6c3fa5ac19c9ecd2fef.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/02/da8f6bf4db153e3573d6c3fa5ac19c9ecd2fef.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/0bae340d1d8f397c83b900a764141be020d4d8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/0bae340d1d8f397c83b900a764141be020d4d8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/0bae340d1d8f397c83b900a764141be020d4d8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/dd1a2bb41d5ad5503cb49556519060e30e8244.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/dd1a2bb41d5ad5503cb49556519060e30e8244.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ea/dd1a2bb41d5ad5503cb49556519060e30e8244.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/c0c8554b4a8bffef4d37e7e5df1c390a62bb28.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/c0c8554b4a8bffef4d37e7e5df1c390a62bb28.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/32/c0c8554b4a8bffef4d37e7e5df1c390a62bb28.debug debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/44c9ee79fdcb8e6b173a3fcd617009d3f66276.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/44c9ee79fdcb8e6b173a3fcd617009d3f66276.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/71/44c9ee79fdcb8e6b173a3fcd617009d3f66276.debug debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f3815dbd5a108ae5ee9b965bb16705b20f14af.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f3815dbd5a108ae5ee9b965bb16705b20f14af.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d2/f3815dbd5a108ae5ee9b965bb16705b20f14af.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/9f4076382b71c17caff3c5da292cbdafd53da7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/9f4076382b71c17caff3c5da292cbdafd53da7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/23/9f4076382b71c17caff3c5da292cbdafd53da7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/5b617026ad2966577e24ac42b65647eb0e2604.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/5b617026ad2966577e24ac42b65647eb0e2604.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/5b617026ad2966577e24ac42b65647eb0e2604.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/1743ea9a7b9941417dee0de538b8bab1db989c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/1743ea9a7b9941417dee0de538b8bab1db989c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6c/1743ea9a7b9941417dee0de538b8bab1db989c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/77f57d47b7c7a1c8f7825416f950b271cb34b3.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/77f57d47b7c7a1c8f7825416f950b271cb34b3.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ab/77f57d47b7c7a1c8f7825416f950b271cb34b3.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d/868f0e824ec844fb05b0d204948f8d3f245806.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d/868f0e824ec844fb05b0d204948f8d3f245806.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/9d/868f0e824ec844fb05b0d204948f8d3f245806.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/881712fed556853c2afc30febc4b9e75cec7e5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/881712fed556853c2afc30febc4b9e75cec7e5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/de/881712fed556853c2afc30febc4b9e75cec7e5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/f62039edb27fbb92f176f9b6ad9cf92c95bebe.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/f62039edb27fbb92f176f9b6ad9cf92c95bebe.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/f62039edb27fbb92f176f9b6ad9cf92c95bebe.debug debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/372c617d153cc792aa0abc5d83c54be33678ec.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/372c617d153cc792aa0abc5d83c54be33678ec.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/79/372c617d153cc792aa0abc5d83c54be33678ec.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/3413d6553629470fa3a0da96b4a5d13044a103.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/3413d6553629470fa3a0da96b4a5d13044a103.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/3413d6553629470fa3a0da96b4a5d13044a103.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/73 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/73/ebb8c1461834e00f853ce9cb5fd8977c557670.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/73/ebb8c1461834e00f853ce9cb5fd8977c557670.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/73/ebb8c1461834e00f853ce9cb5fd8977c557670.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/a41262dd68ad99ef9d8c44ce469edb042974d1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/a41262dd68ad99ef9d8c44ce469edb042974d1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bc/a41262dd68ad99ef9d8c44ce469edb042974d1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7d objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7d/71d28618b27894ed94ad39ac973c8b73d87677.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7d/71d28618b27894ed94ad39ac973c8b73d87677.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/7d/71d28618b27894ed94ad39ac973c8b73d87677.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/159cbdbcfd05031c922289b91404f907c720c5.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/159cbdbcfd05031c922289b91404f907c720c5.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/159cbdbcfd05031c922289b91404f907c720c5.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/e2e01375966c55f9c174698bb7c92b0bbbc8c2.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/e2e01375966c55f9c174698bb7c92b0bbbc8c2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2e/e2e01375966c55f9c174698bb7c92b0bbbc8c2.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/cb2a435d864983eeb02601d6d60b10fffdfd7a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/cb2a435d864983eeb02601d6d60b10fffdfd7a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b2/cb2a435d864983eeb02601d6d60b10fffdfd7a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/fa9ff23629c5175ec9cb34886bbadc676aff9a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/fa9ff23629c5175ec9cb34886bbadc676aff9a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/88/fa9ff23629c5175ec9cb34886bbadc676aff9a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/b0a527dd1ee272889aac1005b275a711616b60.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/b0a527dd1ee272889aac1005b275a711616b60.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c5/b0a527dd1ee272889aac1005b275a711616b60.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2fbb060f11455b0a925c5bd8e0154664b427f6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2fbb060f11455b0a925c5bd8e0154664b427f6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/2fbb060f11455b0a925c5bd8e0154664b427f6.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/e3c4834e883def8b4f42f7a90cdcd39596ab53.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/e3c4834e883def8b4f42f7a90cdcd39596ab53.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/72/e3c4834e883def8b4f42f7a90cdcd39596ab53.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/69e2563015c80f8f730547181500c038fe6b93.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/69e2563015c80f8f730547181500c038fe6b93.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/69e2563015c80f8f730547181500c038fe6b93.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/911237b92d2e745b1521f1b86ce630261ca9a9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/911237b92d2e745b1521f1b86ce630261ca9a9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/911237b92d2e745b1521f1b86ce630261ca9a9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/ac27299ce00823918f5aea7c2b4a9b422df973.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/ac27299ce00823918f5aea7c2b4a9b422df973.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/0f/ac27299ce00823918f5aea7c2b4a9b422df973.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/4b48cc1ce0a42ac2eca85c6f453fb903487631.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/4b48cc1ce0a42ac2eca85c6f453fb903487631.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/4b48cc1ce0a42ac2eca85c6f453fb903487631.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/a2f764c54dcb1cc1b37949a579b743724b86da.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/a2f764c54dcb1cc1b37949a579b743724b86da.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/a2f764c54dcb1cc1b37949a579b743724b86da.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/01fab811d3358c936f01c323d9c1853806cd9d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/01fab811d3358c936f01c323d9c1853806cd9d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/27/01fab811d3358c936f01c323d9c1853806cd9d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/30617bec8f6bb6571d4727638e85f96099638d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/30617bec8f6bb6571d4727638e85f96099638d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/30617bec8f6bb6571d4727638e85f96099638d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/10 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/10/e097d5d2c5824a406b24740dfea7dd8c0b9eaf.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/10/e097d5d2c5824a406b24740dfea7dd8c0b9eaf.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/10/e097d5d2c5824a406b24740dfea7dd8c0b9eaf.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/5f15a817f5f171e265c7593d08329093aee432.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/5f15a817f5f171e265c7593d08329093aee432.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1e/5f15a817f5f171e265c7593d08329093aee432.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/8feefb07b6f4f8aa04ce0adcd71ba65de6a0ab.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/8feefb07b6f4f8aa04ce0adcd71ba65de6a0ab.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c4/8feefb07b6f4f8aa04ce0adcd71ba65de6a0ab.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/545ecac46796cb13b60d1309a5e90071848aea.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/545ecac46796cb13b60d1309a5e90071848aea.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c7/545ecac46796cb13b60d1309a5e90071848aea.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/d33578e473f51248a225279043fc9bb81f56a7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/d33578e473f51248a225279043fc9bb81f56a7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/18/d33578e473f51248a225279043fc9bb81f56a7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/1a954c4e8ea9dac77a649c62effe27e8441331.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/1a954c4e8ea9dac77a649c62effe27e8441331.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/1a954c4e8ea9dac77a649c62effe27e8441331.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/daa82aefb51887611c70a75ef7da4e562fab49.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/daa82aefb51887611c70a75ef7da4e562fab49.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5f/daa82aefb51887611c70a75ef7da4e562fab49.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/be66042a837d37f736a13f1fec414dfc56222e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/be66042a837d37f736a13f1fec414dfc56222e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/49/be66042a837d37f736a13f1fec414dfc56222e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/db4ae854ff71c0a23770f115755b9a2f77db69.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/db4ae854ff71c0a23770f115755b9a2f77db69.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ae/db4ae854ff71c0a23770f115755b9a2f77db69.debug debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/62290ca1e172b13c6e2d6f9d4573ef9a658d55.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/62290ca1e172b13c6e2d6f9d4573ef9a658d55.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/6a/62290ca1e172b13c6e2d6f9d4573ef9a658d55.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/31d5740aac9b962f326e5d82392a8e0a8bd66d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/31d5740aac9b962f326e5d82392a8e0a8bd66d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d8/31d5740aac9b962f326e5d82392a8e0a8bd66d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/414e35f91283cbee0541638061f31bc91b231f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/414e35f91283cbee0541638061f31bc91b231f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3a/414e35f91283cbee0541638061f31bc91b231f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/63abaadeee435cd6f81c08d7dd55ebd170d6b8.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/63abaadeee435cd6f81c08d7dd55ebd170d6b8.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f8/63abaadeee435cd6f81c08d7dd55ebd170d6b8.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/80a8e07980217a6bf8f6c940ae4a0417b3fb3f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/80a8e07980217a6bf8f6c940ae4a0417b3fb3f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/80a8e07980217a6bf8f6c940ae4a0417b3fb3f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/24680732e543c3d2699e21102dc18dbe07137f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/24680732e543c3d2699e21102dc18dbe07137f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a0/24680732e543c3d2699e21102dc18dbe07137f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/d63e1d56beac55481b59b097fd987f73695e6f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/d63e1d56beac55481b59b097fd987f73695e6f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/64/d63e1d56beac55481b59b097fd987f73695e6f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/a8334bb40678cf99b20ae0dedaa767c74cf07c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/a8334bb40678cf99b20ae0dedaa767c74cf07c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/34/a8334bb40678cf99b20ae0dedaa767c74cf07c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/0510c0050a118a17beaca39a4bddd0aa78616e.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/0510c0050a118a17beaca39a4bddd0aa78616e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/0510c0050a118a17beaca39a4bddd0aa78616e.debug debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/8269eb1b8a07e7a03b4bc118a1af45d008490b.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/8269eb1b8a07e7a03b4bc118a1af45d008490b.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/2a/8269eb1b8a07e7a03b4bc118a1af45d008490b.debug debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5a objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5a/19c1c43b5a513f95bfe05d7796da0feea7a6a9.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5a/19c1c43b5a513f95bfe05d7796da0feea7a6a9.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/5a/19c1c43b5a513f95bfe05d7796da0feea7a6a9.debug debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e6 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e6/16e01a0406683a3fe605bc0a2dbebefb67942f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e6/16e01a0406683a3fe605bc0a2dbebefb67942f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e6/16e01a0406683a3fe605bc0a2dbebefb67942f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/ddbe2a45c766e365013b48be1c23b3b86a5c34.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/ddbe2a45c766e365013b48be1c23b3b86a5c34.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/21/ddbe2a45c766e365013b48be1c23b3b86a5c34.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/a6c266b9f0dc08b881f3d93184ff0f8b77fda1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/a6c266b9f0dc08b881f3d93184ff0f8b77fda1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/a6c266b9f0dc08b881f3d93184ff0f8b77fda1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c8 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c8/6f8ce33f0400ee17eb426d02783004cfde4f06.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c8/6f8ce33f0400ee17eb426d02783004cfde4f06.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/c8/6f8ce33f0400ee17eb426d02783004cfde4f06.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/03c73a86b773712815ed41e9af1a8212b387cd.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/03c73a86b773712815ed41e9af1a8212b387cd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/8f/03c73a86b773712815ed41e9af1a8212b387cd.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/74 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/74/e9176990eb3b16dd51492d63935e9b231708da.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/74/e9176990eb3b16dd51492d63935e9b231708da.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/74/e9176990eb3b16dd51492d63935e9b231708da.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/f99a696ca30a6f2dbedfe4b576b4de14b39e3f.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/f99a696ca30a6f2dbedfe4b576b4de14b39e3f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85/f99a696ca30a6f2dbedfe4b576b4de14b39e3f.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/cb objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-x86_64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/786c5c59d4cb6fc7a2d6a0f50179e0d4567588.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/786c5c59d4cb6fc7a2d6a0f50179e0d4567588.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/05/786c5c59d4cb6fc7a2d6a0f50179e0d4567588.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/af objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-x86_64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/0efbe7e75b5ad94a3a0f1273917ab20fcd9b9a.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/0efbe7e75b5ad94a3a0f1273917ab20fcd9b9a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/bf/0efbe7e75b5ad94a3a0f1273917ab20fcd9b9a.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/ec objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-x86_64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/9ff28b4297d8877ba6b0c13fc9e88fab7c29af.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/9ff28b4297d8877ba6b0c13fc9e88fab7c29af.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/3e/9ff28b4297d8877ba6b0c13fc9e88fab7c29af.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/10259a04652e809cd053744769e8dc6db71241.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/10259a04652e809cd053744769e8dc6db71241.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/b4/10259a04652e809cd053744769e8dc6db71241.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/69 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-x86_64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/77/b7d42528ed7bfa9679bdf45276db73795bdbb7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/77/b7d42528ed7bfa9679bdf45276db73795bdbb7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/77/b7d42528ed7bfa9679bdf45276db73795bdbb7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-x86_64-linux-gnu.so 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debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/9d0e63fe39b2ad10571f4113e640cf924aced0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/9d0e63fe39b2ad10571f4113e640cf924aced0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/87/9d0e63fe39b2ad10571f4113e640cf924aced0.debug debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/180537de80ec782e1976adbefc74d4ccea25a1.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/180537de80ec782e1976adbefc74d4ccea25a1.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/42/180537de80ec782e1976adbefc74d4ccea25a1.debug debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/86811535212354f1d185379b9135d256377ee7.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/86811535212354f1d185379b9135d256377ee7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/12/86811535212354f1d185379b9135d256377ee7.debug debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/a06d92e4d7588ea23798efa944b7243dd23c2d.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/a06d92e4d7588ea23798efa944b7243dd23c2d.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a2/a06d92e4d7588ea23798efa944b7243dd23c2d.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-x86_64-linux-gnu.so debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/c5288d821becfe1ecfa75b81dd01020097060c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/c5288d821becfe1ecfa75b81dd01020097060c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-x86_64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a3/c5288d821becfe1ecfa75b81dd01020097060c.debug debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-x86_64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-x86_64-linux-gnu.so 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debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/1c/eb014be0824f593a58418c758aacadcb9d95ef.debug debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/da41fa7de1b0da255ce1a788e414e75732aabf.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/da41fa7de1b0da255ce1a788e414e75732aabf.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cbflib.tst_memory objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d4/da41fa7de1b0da255ce1a788e414e75732aabf.debug debian/python3-cctbx/usr/bin/cbflib.tst_memory install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.getting_started debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/60ac3e06057e5b66d561d866779f94fe4412b4.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/60ac3e06057e5b66d561d866779f94fe4412b4.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.getting_started objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/a5/60ac3e06057e5b66d561d866779f94fe4412b4.debug debian/python3-cctbx/usr/bin/cctbx.getting_started install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9681ef89e388148ccbb2f3ce88655eaa39a06c.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9681ef89e388148ccbb2f3ce88655eaa39a06c.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/be/9681ef89e388148ccbb2f3ce88655eaa39a06c.debug debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/48bd844a9fcd0f3b3c07e944dcb78d5c5ab142.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/48bd844a9fcd0f3b3c07e944dcb78d5c5ab142.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/e7/48bd844a9fcd0f3b3c07e944dcb78d5c5ab142.debug debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx_blobs debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/c2370aa6a989d9f840ffd9a0cdb50c743609a6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/c2370aa6a989d9f840ffd9a0cdb50c743609a6.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx_blobs objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f0/c2370aa6a989d9f840ffd9a0cdb50c743609a6.debug debian/python3-cctbx/usr/bin/cctbx_blobs install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/9f84b6595125b1ae3284232549fcaacb72b0f6.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/9f84b6595125b1ae3284232549fcaacb72b0f6.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/d7/9f84b6595125b1ae3284232549fcaacb72b0f6.debug debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/7830d2e890b0e8cea63f65abf1fd107d7884a0.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/7830d2e890b0e8cea63f65abf1fd107d7884a0.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/51/7830d2e890b0e8cea63f65abf1fd107d7884a0.debug debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1 objcopy --only-keep-debug --compress-debug-sections debian/python3-cctbx/usr/bin/cctbx.find_distances debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/3fcd1be7b65821bc8e542af2c7b2012b08d008.debug chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/3fcd1be7b65821bc8e542af2c7b2012b08d008.debug strip --remove-section=.comment --remove-section=.note debian/python3-cctbx/usr/bin/cctbx.find_distances objcopy --add-gnu-debuglink debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.build-id/f1/3fcd1be7b65821bc8e542af2c7b2012b08d008.debug debian/python3-cctbx/usr/bin/cctbx.find_distances install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-cctbx/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/python3-cctbx/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-cctbx/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-cctbx/usr/lib/debug install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc ln -s python3-cctbx debian/.debhelper/python3-cctbx/dbgsym-root/usr/share/doc/python3-cctbx-dbgsym install -m0755 -d debian/.debhelper/python3-cctbx dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/libcctbx0/DEBIAN/shlibs install -m0755 -d debian/libcctbx0/DEBIAN echo "libann_adaptor 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libasymmetric_map 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcbf-private 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libccp4io 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libcctbx_sgtbx_asu 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libdxtbxspotfinder 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_mtz 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_pdb 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libiotbx_xplor 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_masks 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libmmtbx_tls 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libomptbx 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "librstbx 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_boost_python 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_minpack 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libscitbx_slatec 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libsmtbx_refinement_constraints 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs echo "libspotfinder 0 libcctbx0 (>= 2024.8+ds2+~3.21.1+ds1)" >> debian/libcctbx0/DEBIAN/shlibs chmod 0644 -- debian/libcctbx0/DEBIAN/shlibs mv debian/.debhelper/generated/libcctbx0/triggers.new debian/.debhelper/generated/libcctbx0/triggers rm -f debian/libcctbx-dev/DEBIAN/shlibs rm -f debian/python3-cctbx/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN dpkg-shlibdeps -Tdebian/libcctbx0.substvars debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_xplor.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libann_adaptor.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcbf-private.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libsmtbx_refinement_constraints.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_pdb.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/librstbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_tls.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libiotbx_mtz.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libasymmetric_map.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libmmtbx_masks.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libccp4io.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libspotfinder.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_minpack.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libomptbx.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libcctbx_sgtbx_asu.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_slatec.so.0.0.1 debian/libcctbx0/usr/lib/x86_64-linux-gnu/libdxtbxspotfinder.so.0.0.1 install -m0755 -d debian/python3-cctbx/DEBIAN dpkg-shlibdeps -Tdebian/python3-cctbx.substvars debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-x86_64-linux-gnu.so debian/python3-cctbx/usr/lib/cctbx/python3.12/boost_adaptbx/tests/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_svd debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_givens debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_cholesky debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/matrix/tests/tst_householder debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/lbfgs/tst_lbfgs debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/error/tst_error debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/math/tests/tst debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_1 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_vec3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_accessors debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_ref_matrix_facet debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_sym_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_2 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_5 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_optional_copy debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_rectangular_full_packed debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_unsigned_float_arithmetic debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_af_4 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/array_family/tst_mat3 debian/python3-cctbx/usr/lib/cctbx/python3.12/scitbx/serialization/tst_base_256 debian/python3-cctbx/usr/lib/cctbx/python3.12/iotbx/pdb/hybrid_36_fem debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_reparametrisation debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_geometrical_hydrogens debian/python3-cctbx/usr/lib/cctbx/python3.12/smtbx/refinement/constraints/tests/tst_special_position debian/python3-cctbx/usr/bin/cbflib.tst_memory debian/python3-cctbx/usr/bin/cctbx.getting_started debian/python3-cctbx/usr/bin/cctbx.sym_equiv_sites debian/python3-cctbx/usr/bin/cctbx.lattice_symmetry debian/python3-cctbx/usr/bin/cctbx_blobs debian/python3-cctbx/usr/bin/cctbx.sys_abs_equiv_space_groups debian/python3-cctbx/usr/bin/cctbx.convert_ccp4_symop_lib debian/python3-cctbx/usr/bin/cctbx.find_distances dpkg-shlibdeps: warning: symbol PyExc_IndexError used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyImport_ImportModule used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyExc_RuntimeError used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_Dealloc used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_CallFunction used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyObject_IsTrue used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyErr_SetString used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol _Py_NoneStruct used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: symbol PyRange_Type used by debian/libcctbx0/usr/lib/x86_64-linux-gnu/libscitbx_boost_python.so.0.0.1 found in none of the libraries dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgs_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_breadth_first_search_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_shared_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_covariance_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_maximum_clique_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_utils_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_tuple_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dsn6_map_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_symmetry_constraints_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_mtz_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/fable_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/annlib_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_chemical_elements_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_emma_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_util_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyRange_Type: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_image_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_masks_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_restraints_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_minpack_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_fonts_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_miller_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_python_streambuf_test_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBytes_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_icsd_radii_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lstbx_normal_equations_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_validation_ramachandran_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_xplor_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_glmtbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_anharmonic_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_structure_factors_direct_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/ccp4io_adaptbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_metric_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_dxtbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_suffixtree_single_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_masks_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_crystal_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_restraints_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rsr_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_shelx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_model_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_GetIter: it's probably a plugin dpkg-shlibdeps: warning: 34 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simulation_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_den_restraints_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cma_es_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cbflib_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_lbfgsb_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_graph_structure_comparison_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsTrue: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_graphics_utils_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/regression_test_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_HasAttrString: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_distltbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_diffraction_fastbragg_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_bcr_bcr_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_translation_search_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dynamics_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ramachandran_restraints_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 24 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_glu_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_bruker_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_rigid_body_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_simage_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_sphere_surface_sampling_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_primitive_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_integration_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_tiny_pse_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_fftpack_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_french_wilson_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_covalent_radii_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_constraints_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_IsInstance: it's probably a plugin dpkg-shlibdeps: warning: 30 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_sasaki_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_scaling_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adptbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_RuntimeError: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_probe_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_clustering_algorithm_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_sparse_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 23 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reduce_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 29 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_indexing_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_meta_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 25 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_uctbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/spotfinder_hough_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_geometry_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_dmtbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Occurred: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_linalg_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_gl_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_Type: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_merging_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_flex_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyCapsule_GetPointer: it's probably a plugin dpkg-shlibdeps: warning: 49 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_min_cut_max_flow_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_orientation_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_array_family_shared_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_refinement_least_squares_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_pair_interaction_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_neutron_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bpcx_detector_model_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_ab_initio_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_shared_types_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_wigner_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_ccp4_map_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_masking_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_xray_scattering_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_SetString: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_statistics_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_observations_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_dtrek_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_Size: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_cartesian_restraints_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_iso_surface_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_cif_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_CallFunction: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_ncs_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 13 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_optional_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_hydrogens_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_decompose_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_mosaic_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 10 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_python_hybrid_times_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib64/ld-linux-x86-64.so.2 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib64/ld-linux-x86-64.so.2.usr-is-merged dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_flumpy.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBytes_Size: it's probably a plugin dpkg-shlibdeps: warning: 128 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_StopIteration: it's probably a plugin dpkg-shlibdeps: warning: 27 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_stl_map_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_clash_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_reference_coordinate_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyExc_IndexError: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_math_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyComplex_Type: it's probably a plugin dpkg-shlibdeps: warning: 17 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_maptbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_random_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_rational_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_indexing_api_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_max_lik_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_detectors_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 9 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/std_pair_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_wildcard_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_imageset_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 21 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_f_model_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 15 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_alignment_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyUnicode_FromStringAndSize: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_xray_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_GetItem: it's probably a plugin dpkg-shlibdeps: warning: 28 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_fp_fdp_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_henke_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/determine_unit_cell_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_scalepack_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_connected_component_algorithm_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyList_Type: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_adp_restraints_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyObject_HasAttrString: it's probably a plugin dpkg-shlibdeps: warning: 22 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_dssp_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_boost_thread_test_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_asymmetric_map_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_rotamer_fit_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 12 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_vector_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PySlice_Type: it's probably a plugin dpkg-shlibdeps: warning: 19 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_viewer_utils_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_bulk_solvent_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/gltbx_quadrics_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyErr_Clear: it's probably a plugin dpkg-shlibdeps: warning: 20 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_multipolar_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 1 similar warning has been skipped (use -v to see it) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_attenuation_coefficient_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_geometry_asa_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/smtbx_array_family_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_New: it's probably a plugin dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_utils_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_cubicle_neighbors_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_Type: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_eltbx_wavelengths_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_bandpass_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/omptbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_secondary_structure_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyFloat_FromDouble: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_symmetry_search_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyBool_FromLong: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_stl_set_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 16 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/iotbx_pdb_hierarchy_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PySlice_Type: it's probably a plugin dpkg-shlibdeps: warning: 32 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/rstbx_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_Type: it's probably a plugin dpkg-shlibdeps: warning: 14 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyLong_FromUnsignedLong: it's probably a plugin dpkg-shlibdeps: warning: 8 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_sgtbx_asu_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 18 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/dxtbx_format_nexus_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/scitbx_r3_utils_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 5 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_building_loop_closure_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 7 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/cctbx_math_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_Dealloc: it's probably a plugin dpkg-shlibdeps: warning: 6 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/mmtbx_tls_optimise_amplitudes_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol PyTuple_Type: it's probably a plugin dpkg-shlibdeps: warning: 11 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: debian/python3-cctbx/usr/lib/python3/dist-packages/boost_adaptbx_graph_utility_ext.cpython-312-x86_64-linux-gnu.so contains an unresolvable reference to symbol _Py_NoneStruct: it's probably a plugin dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN install -p -m0644 debian/.debhelper/generated/libcctbx0/triggers debian/libcctbx0/DEBIAN/triggers install -m0755 -d debian/libcctbx-dev/DEBIAN install -m0755 -d debian/python3-cctbx/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/postinst cat debian/python3-cctbx.postinst.debhelper >> debian/python3-cctbx/DEBIAN/postinst chmod 0755 -- debian/python3-cctbx/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-cctbx/DEBIAN/prerm cat debian/python3-cctbx.prerm.debhelper >> debian/python3-cctbx/DEBIAN/prerm chmod 0755 -- debian/python3-cctbx/DEBIAN/prerm dh_numpy3 -O--buildsystem=pybuild mv debian/libcctbx0.substvars.new debian/libcctbx0.substvars mv debian/libcctbx-dev.substvars.new debian/libcctbx-dev.substvars mv debian/python3-cctbx.substvars.new debian/python3-cctbx.substvars dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN echo misc:Depends= >> debian/libcctbx0.substvars echo misc:Pre-Depends= >> debian/libcctbx0.substvars install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/.debhelper/libcctbx0/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=libcctbx0-dbgsym "-DDepends=libcctbx0 (= \${binary:Version})" "-DDescription=debug symbols for libcctbx0" "-DBuild-Ids=014814180cbe53261cd586a053cb31f69b5d341b 06b76c457b52c6cfb0c5fb114c7c3fb96d9e350a 07b52daae1f4a95753092e3fc56eac0619a2599f 133cc5b91f3260e31e0e59e683f111e5510ce112 15819672b01704a036cf613dd47eea8f580a2100 1ac72328f3b075df3ef0913770edd278f8429459 26f81818d18620e489656a7f7093fa7aca249508 35c0089167d8c8d36fbc4af570342819cab52b08 57a676e3e831e612d4e54b5527472847d87adcfe 9e1d28b021c41b09549ad1dda5c83c9dbbd4353b a338e34546e26d9154b9cc1f83841c135cb455a5 af52dcbcd8a40aa36929700140b66e3a70218642 b43d97b51f999a9508ee1b4e0ca73454864e451a bb983969c55d975cf4dfb3a5f5e21eb82cf6b6a7 ce096fc968d0786363ea14f880fd8ffebc52c997 cf06f33f518b4449fe00c08247b9fef594a6d2b8 f028887bce3c12e568a7beb873821c0febfe5ac8 f771be8190a406abd4b0674a551831e42e2ffb41 fa9413602d746b0a7c250c9869dfe43f0146324b" -DSection=debug -UMulti-Arch -UReplaces -UBreaks install -m0755 -d debian/libcctbx-dev/DEBIAN echo misc:Depends= >> debian/libcctbx-dev.substvars echo misc:Pre-Depends= >> debian/libcctbx-dev.substvars dpkg-gencontrol -plibcctbx-dev -ldebian/changelog -Tdebian/libcctbx-dev.substvars -cdebian/control -Pdebian/libcctbx-dev install -m0755 -d debian/python3-cctbx/DEBIAN echo misc:Depends= >> debian/python3-cctbx.substvars echo misc:Pre-Depends= >> debian/python3-cctbx.substvars install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/.debhelper/python3-cctbx/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-cctbx-dbgsym "-DDepends=python3-cctbx (= \${binary:Version})" "-DDescription=debug symbols for python3-cctbx" "-DBuild-Ids=00486194a2560609342da00041f8ac8d1e082eb5 02da8f6bf4db153e3573d6c3fa5ac19c9ecd2fef 0412ef22b6bbaded28c3fa1d9014d34f32aa47ad 0533320ff671eaede1e17be749131e9f8cafa4c6 056c99411447330a56fb853a7862ef2f3cc942ed 05786c5c59d4cb6fc7a2d6a0f50179e0d4567588 05f20cd430a6576b620dba96847faee0e56f992f 06d7fe5bb2debed8a97055b224c0bc98c6956860 074d84502af46388db819f40756bfc8bece5555f 08a5f627094c761f81c0e6e079798f6410489199 0dd0903cab581ca516fd263871d621dc8e5e1ca5 0e012e5829ed10ccb908c59ffe889b36d3a0b32e 0ef9daafec467d299b14ee89f94ed83884a8e0d6 0fac27299ce00823918f5aea7c2b4a9b422df973 0fb490ee5919999498b542215b1f2d443566045e 10e097d5d2c5824a406b24740dfea7dd8c0b9eaf 11e0fb447434a8fa79be7d8a11715ea13bc10e74 1286811535212354f1d185379b9135d256377ee7 12a6c266b9f0dc08b881f3d93184ff0f8b77fda1 14d983704359139b22b9ba66807c4a80d04ee9aa 1541d35cbe77bb840080de1ba7949b1b581b3d44 17f5e5fe86cb7ce40194827cd3c6a8dc8083bed0 18ae4d984bbae953a58fef2c918554d83f813b21 18d33578e473f51248a225279043fc9bb81f56a7 18f62039edb27fbb92f176f9b6ad9cf92c95bebe 1a45c6c414e44f410881e26256a12689b02b2874 1a64d4ffaed25453754e1b614f3d919d84ed1e2f 1bf46ca7104aeaf51d92cbe8ca395069600beda5 1ceb014be0824f593a58418c758aacadcb9d95ef 1e5f15a817f5f171e265c7593d08329093aee432 1efcaa1b154622fbed4c509a043a1dd5a4f94b51 21159cbdbcfd05031c922289b91404f907c720c5 21ddbe2a45c766e365013b48be1c23b3b86a5c34 239f4076382b71c17caff3c5da292cbdafd53da7 262afe535078a6d79eebe5baceca5ca08d19378c 2701fab811d3358c936f01c323d9c1853806cd9d 287632f451858d87f4d77ca5e9bba9dc8ab99041 28eaf6a6b84c6022dabebe6c9d783f307eeb6e05 2a4b48cc1ce0a42ac2eca85c6f453fb903487631 2a8269eb1b8a07e7a03b4bc118a1af45d008490b 2dfafbf25e3aaaba547a2ed649399e627eb4752c 2ea9acc714ca794033c0171d10a604a67a179773 2eaddd36797ec33015cce03cfe6d06f92ab0dd0e 2ee2e01375966c55f9c174698bb7c92b0bbbc8c2 2f956d6871d927f288f2d7c27601367c97a84180 3085b8040bd0dfaeb7e94647dd0487cceac4031e 32c0c8554b4a8bffef4d37e7e5df1c390a62bb28 34911237b92d2e745b1521f1b86ce630261ca9a9 34a8334bb40678cf99b20ae0dedaa767c74cf07c 372a026234b58f9b775a1eeca632c496da257b87 39668ebfdfcc3d05586a5ea8297e0d607dcfc4d4 3a0bae340d1d8f397c83b900a764141be020d4d8 3a414e35f91283cbee0541638061f31bc91b231f 3be4ab832979e110be098a4f667b621e5121e5aa 3e85b5ff784f20dcd32c4556436ceb83571c8c0f 3e9ff28b4297d8877ba6b0c13fc9e88fab7c29af 42180537de80ec782e1976adbefc74d4ccea25a1 46d36d75d3aa3685d3f18427cf345d085b53ae40 4733585e65e6a939ba74996304c362316b91595d 48875c321e156ca53970cca3c7895f11970f4b41 49be66042a837d37f736a13f1fec414dfc56222e 49d2f0010fdc0ad0c6141bbe8d09565a55e7ea2c 50d4c4890aecc5efb0c7d7f23a3bc75fe8e2708f 5130617bec8f6bb6571d4727638e85f96099638d 513413d6553629470fa3a0da96b4a5d13044a103 517830d2e890b0e8cea63f65abf1fd107d7884a0 524faceabcb39e65cd6313f47c1bf909b01c771b 52a615fb757157a4a67abbbe17287b531c4bf526 56f8ee9f0849c97d2578e89a3895ca913be5f117 57170556844844f29b114cd75f2916940a94d801 586b6a8ae81dc2eb89406037c5181d65fbbe78da 5a19c1c43b5a513f95bfe05d7796da0feea7a6a9 5b249ade5b07b4615552b94598f58af5daff3b03 5d94517cce222d8c2588e3987f12b7b7ebeaf99e 5fd562eb8223eb2ea28e2cca11edae9a522567b1 5fdaa82aefb51887611c70a75ef7da4e562fab49 60cb9e6bc6e8e87c47bf92fc6db61ece58486cc6 61f5415c3b832e3b15d1ea0f2404225da134fdb7 64d63e1d56beac55481b59b097fd987f73695e6f 653af8670ed4a823547a4663a9875ed2a2ab0b50 69bc8207b98e459c4c1cc446c55d01ff934e48ed 6a401ea875ae204b7188775749708c6ab091d86d 6a62290ca1e172b13c6e2d6f9d4573ef9a658d55 6ac063637eaad7da1d1e41f32acdebfde2acb5d3 6c1743ea9a7b9941417dee0de538b8bab1db989c 6df90892d49d0063fdb653e609d12a1ab0d5fd77 71061a8b6d9e51a580c178aa734ec97eecc4cb69 7144c9ee79fdcb8e6b173a3fcd617009d3f66276 72e3c4834e883def8b4f42f7a90cdcd39596ab53 73ebb8c1461834e00f853ce9cb5fd8977c557670 73ee00e25ec09e650a5641a152df1a39a8fb6ae0 74e9176990eb3b16dd51492d63935e9b231708da 76433056cd54fca8a3f9b65c1cd1de0fb36360ec 77a35ff726f21479e37a5b1df4257343b0059cd7 77b7d42528ed7bfa9679bdf45276db73795bdbb7 79372c617d153cc792aa0abc5d83c54be33678ec 7c9c2e6d6b0f7dfbbc5a0f5f629950a0760e10be 7cef42807a64e683bcbb9851847928d7f0a32918 7d306d15ea6d78f9eab907c02d7f377e51b67db4 7d71d28618b27894ed94ad39ac973c8b73d87677 7e821f5bbb977469fc3e96e2692680b6f1cd29ff 7f8d20d6bf541c6dea2f580acbea4950a73d2b07 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9d868f0e824ec844fb05b0d204948f8d3f245806 a024680732e543c3d2699e21102dc18dbe07137f a12822f595f42fc40989ce5300d790c15877a232 a269e2563015c80f8f730547181500c038fe6b93 a2a06d92e4d7588ea23798efa944b7243dd23c2d a380a8e07980217a6bf8f6c940ae4a0417b3fb3f a3c5288d821becfe1ecfa75b81dd01020097060c a420bf3c49693b7201aa3e04ded721580d23d2a7 a560ac3e06057e5b66d561d866779f94fe4412b4 a577f10e1a17f8b012582b3f689df875c310e26b a6e7e1c650125e522203d429b78b9ada20aef6e9 a77b0a515e112e8c098f159b56aa861d0ae52534 a9da6abee9e864500fd183f048d70d144afc8f36 ab77f57d47b7c7a1c8f7825416f950b271cb34b3 ac3630c2d35c0a7a269bb109fc1f8a310b262af6 ae761f634950110ea159611396c24bfa7c2c463c aedb4ae854ff71c0a23770f115755b9a2f77db69 afce88f35fbf77517994bbe8d139482715a95ffc b2cb2a435d864983eeb02601d6d60b10fffdfd7a b410259a04652e809cd053744769e8dc6db71241 b4a2f764c54dcb1cc1b37949a579b743724b86da b525f9cfa5089d460e80a40d177081b5cb5e5162 b538d2601e0b39e7ce5d53956cee599f4d82488a b63d69fcf36ccdc7ba3082b0f7f3373bba68157f 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d40eae3935584b7450ac8f522246572061dcd868 d4da41fa7de1b0da255ce1a788e414e75732aabf d79f84b6595125b1ae3284232549fcaacb72b0f6 d7bc42693bf387c48db3ab62c7215a09cef175b1 d831d5740aac9b962f326e5d82392a8e0a8bd66d de25ba35241fea87d18b5040373f9ed3441d50e2 de881712fed556853c2afc30febc4b9e75cec7e5 dea5a95cff9d082560bd0c2ab69f3b65af98ecfe e00581115cc8519073d157a5d17a887baf7cfe98 e49595b72bd5b0d0cad2a96e704fcebbccc19ee1 e5dcf7fb91002127f55e087f135684d93a811dea e616e01a0406683a3fe605bc0a2dbebefb67942f e6815217ba421ea157cecec41568f135fcc9f16f e6af1ddafaac2af5c00362ceee3d3bfef8a7cd9a e748bd844a9fcd0f3b3c07e944dcb78d5c5ab142 eadd1a2bb41d5ad5503cb49556519060e30e8244 eae6530d94320543f70731290a5ae90294abb5a5 ecb44ea9762e9c868da003da85ee2d18ef799eb0 ef3ac656044040328c23fc7c99ca20b3cf0aa18c f0c2370aa6a989d9f840ffd9a0cdb50c743609a6 f0d1f099ba23242f6b3be712e99b1f2abc2a6408 f106165a0bfde9a67e9c01d72de48e70c87b6e9c f13fcd1be7b65821bc8e542af2c7b2012b08d008 f2f598c6ca066fbabc741a1db787554165f71b5a f8486ce00220f6e1765f54bbb7315fe49d0332a0 f863abaadeee435cd6f81c08d7dd55ebd170d6b8 f8f10c5912f8426e4ed4e2c4a8c91880e2617518 fafd5fa6fea62a11fb31ff4c276cc0d96fd37d40" -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package libcctbx0: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibcctbx0 -ldebian/changelog -Tdebian/libcctbx0.substvars -cdebian/control -Pdebian/libcctbx0 dpkg-gencontrol: warning: package libcctbx-dev: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/libcctbx-dev/DEBIAN/control chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-cctbx -ldebian/changelog -Tdebian/python3-cctbx.substvars -cdebian/control -Pdebian/python3-cctbx dpkg-gencontrol: warning: package libcctbx0: substitution variable ${python3:Depends} unused, but is defined chmod 0644 -- debian/libcctbx0/DEBIAN/control chmod 0644 -- debian/python3-cctbx/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/libcctbx0/DEBIAN install -m0755 -d debian/libcctbx-dev/DEBIAN cd debian/libcctbx0 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums install -m0755 -d debian/python3-cctbx/DEBIAN cd debian/libcctbx-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python3-cctbx >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcctbx0/DEBIAN/md5sums install -m0755 -d debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN cd debian/.debhelper/libcctbx0/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libcctbx-dev/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libcctbx0/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/python3-cctbx/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN cd debian/.debhelper/python3-cctbx/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-cctbx/dbgsym-root/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/.debhelper/libcctbx0/dbgsym-root .. dpkg-deb --root-owner-group --build debian/libcctbx0 .. dpkg-deb: building package 'libcctbx0-dbgsym' in '../libcctbx0-dbgsym_2024.8+ds2+~3.21.1+ds1-3_amd64.deb'. dpkg-deb --root-owner-group --build debian/python3-cctbx .. dpkg-deb --root-owner-group --build debian/libcctbx-dev .. dpkg-deb: building package 'libcctbx0' in '../libcctbx0_2024.8+ds2+~3.21.1+ds1-3_amd64.deb'. dpkg-deb: building package 'python3-cctbx' in '../python3-cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.deb'. dpkg-deb --root-owner-group --build debian/.debhelper/python3-cctbx/dbgsym-root .. dpkg-deb: building package 'libcctbx-dev' in '../libcctbx-dev_2024.8+ds2+~3.21.1+ds1-3_amd64.deb'. dpkg-deb: building package 'python3-cctbx-dbgsym' in '../python3-cctbx-dbgsym_2024.8+ds2+~3.21.1+ds1-3_amd64.deb'. dpkg-genbuildinfo --build=binary -O../cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.buildinfo dpkg-genchanges --build=binary -O../cctbx_2024.8+ds2+~3.21.1+ds1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/456915/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/456915/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/456915 and its subdirectories I: Current time: Wed Dec 10 05:35:49 +14 2025 I: pbuilder-time-stamp: 1765294549