I: pbuilder: network access will be disabled during build I: Current time: Mon Dec 16 11:04:15 +14 2024 I: pbuilder-time-stamp: 1734296655 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/unstable-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [biomaj3_3.1.24-2.dsc] I: copying [./biomaj3_3.1.24.orig.tar.xz] I: copying [./biomaj3_3.1.24-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sat Dec 14 19:50:09 2024 gpgv: using RSA key 8F6DE104377F3B11E741748731F3144544A1741A gpgv: issuer "tchet@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./biomaj3_3.1.24-2.dsc: no acceptable signature found dpkg-source: info: extracting biomaj3 in biomaj3-3.1.24 dpkg-source: info: unpacking biomaj3_3.1.24.orig.tar.xz dpkg-source: info: unpacking biomaj3_3.1.24-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_remove_drmaa.patch dpkg-source: info: applying remove_mock.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1247446/tmp/hooks/D01_modify_environment starting debug: Running on ionos11-amd64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Dec 15 21:04 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/1247446/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/1247446/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="37" [3]="1" [4]="release" [5]="x86_64-pc-linux-gnu") BASH_VERSION='5.2.37(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=amd64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DIRSTACK=() DISTRIBUTION=unstable EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=x86_64 HOST_ARCH=amd64 IFS=' ' INVOCATION_ID=fe03a1c49b8d417eb749a19b7aa8a407 LANG=C LANGUAGE=et_EE:et LC_ALL=C MACHTYPE=x86_64-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=1247446 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4xZrxPQG/pbuilderrc_o54z --distribution unstable --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/unstable-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4xZrxPQG/b2 --logfile b2/build.log biomaj3_3.1.24-2.dsc' SUDO_GID=111 SUDO_UID=106 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1247446/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, python3-all, python3-bcrypt, python3-pytest, python3-pymongo, python3-redis, python3-setuptools, python3-yapsy, python3-biomaj3-core, python3-biomaj3-zipkin, python3-biomaj3-download, python3-biomaj3-user, python3-biomaj3-process dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19965 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-bcrypt; however: Package python3-bcrypt is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pymongo; however: Package python3-pymongo is not installed. pbuilder-satisfydepends-dummy depends on python3-redis; however: Package python3-redis is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-yapsy; however: Package python3-yapsy is not installed. pbuilder-satisfydepends-dummy depends on python3-biomaj3-core; however: Package python3-biomaj3-core is not installed. pbuilder-satisfydepends-dummy depends on python3-biomaj3-zipkin; however: Package python3-biomaj3-zipkin is not installed. pbuilder-satisfydepends-dummy depends on python3-biomaj3-download; however: Package python3-biomaj3-download is not installed. pbuilder-satisfydepends-dummy depends on python3-biomaj3-user; however: Package python3-biomaj3-user is not installed. pbuilder-satisfydepends-dummy depends on python3-biomaj3-process; however: Package python3-biomaj3-process is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli1{a} libcom-err2{a} libcurl3t64-gnutls{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libngtcp2-16{a} libngtcp2-crypto-gnutls8{a} libnsl2{a} libpipeline1{a} libprotobuf32t64{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} libyaml-0-2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} python3{a} python3-all{a} python3-async-timeout{a} python3-autocommand{a} python3-bcrypt{a} python3-biomaj3-core{a} python3-biomaj3-download{a} python3-biomaj3-process{a} python3-biomaj3-user{a} python3-biomaj3-zipkin{a} python3-blinker{a} python3-bson{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-consul{a} python3-decorator{a} python3-defusedxml{a} python3-deprecated{a} python3-dnspython{a} python3-elasticsearch{a} python3-flask{a} python3-ftputil{a} python3-humanfriendly{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-irodsclient{a} python3-itsdangerous{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jinja2{a} python3-ldap3{a} python3-markupsafe{a} python3-minimal{a} python3-more-itertools{a} python3-packaging{a} python3-pika{a} python3-pkg-resources{a} python3-pluggy{a} python3-prettytable{a} python3-prometheus-client{a} python3-protobuf{a} python3-py-zipkin{a} python3-pyasn1{a} python3-pycurl{a} python3-pymongo{a} python3-pytest{a} python3-redis{a} python3-requests{a} python3-setuptools{a} python3-simpleeval{a} python3-six{a} python3-tabulate{a} python3-tenacity{a} python3-typeguard{a} python3-typing-extensions{a} python3-urllib3{a} python3-wcwidth{a} python3-werkzeug{a} python3-wrapt{a} python3-yaml{a} python3-yapsy{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-asgiref python3-babel python3-bson-ext python3-cryptography python3-dotenv python3-gridfs python3-h2 python3-httpcore python3-httpx python3-openssl python3-pygments python3-pyinotify python3-pymongo-ext python3-simplejson wget 0 packages upgraded, 137 newly installed, 0 to remove and 0 not upgraded. Need to get 42.5 MB of archives. After unpacking 170 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian unstable/main amd64 libpython3.12-minimal amd64 3.12.8-3 [817 kB] Get: 2 http://deb.debian.org/debian unstable/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian unstable/main amd64 python3.12-minimal amd64 3.12.8-3 [2162 kB] Get: 4 http://deb.debian.org/debian unstable/main amd64 python3-minimal amd64 3.12.7-1 [26.8 kB] Get: 5 http://deb.debian.org/debian unstable/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian unstable/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian unstable/main amd64 tzdata all 2024b-4 [256 kB] Get: 8 http://deb.debian.org/debian unstable/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian unstable/main amd64 libcom-err2 amd64 1.47.2~rc1-2 [23.8 kB] Get: 10 http://deb.debian.org/debian unstable/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian unstable/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian unstable/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian unstable/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian unstable/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian unstable/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian unstable/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian unstable/main amd64 readline-common all 8.2-6 [69.4 kB] Get: 18 http://deb.debian.org/debian unstable/main amd64 libreadline8t64 amd64 8.2-6 [169 kB] Get: 19 http://deb.debian.org/debian unstable/main amd64 libpython3.12-stdlib amd64 3.12.8-3 [1969 kB] Get: 20 http://deb.debian.org/debian unstable/main amd64 python3.12 amd64 3.12.8-3 [677 kB] Get: 21 http://deb.debian.org/debian unstable/main amd64 libpython3-stdlib amd64 3.12.7-1 [9712 B] Get: 22 http://deb.debian.org/debian unstable/main amd64 python3 amd64 3.12.7-1 [27.8 kB] Get: 23 http://deb.debian.org/debian unstable/main amd64 libpython3.13-minimal amd64 3.13.1-2 [858 kB] Get: 24 http://deb.debian.org/debian unstable/main amd64 python3.13-minimal amd64 3.13.1-2 [2198 kB] Get: 25 http://deb.debian.org/debian unstable/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian unstable/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 27 http://deb.debian.org/debian unstable/main amd64 ca-certificates all 20240203 [158 kB] Get: 28 http://deb.debian.org/debian unstable/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 29 http://deb.debian.org/debian unstable/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 30 http://deb.debian.org/debian unstable/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 31 http://deb.debian.org/debian unstable/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 32 http://deb.debian.org/debian unstable/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 33 http://deb.debian.org/debian unstable/main amd64 groff-base amd64 1.23.0-6 [1184 kB] Get: 34 http://deb.debian.org/debian unstable/main amd64 bsdextrautils amd64 2.40.2-12 [92.0 kB] Get: 35 http://deb.debian.org/debian unstable/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 36 http://deb.debian.org/debian unstable/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 37 http://deb.debian.org/debian unstable/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 38 http://deb.debian.org/debian unstable/main amd64 autoconf all 2.72-3 [493 kB] Get: 39 http://deb.debian.org/debian unstable/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 40 http://deb.debian.org/debian unstable/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 41 http://deb.debian.org/debian unstable/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 42 http://deb.debian.org/debian unstable/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 43 http://deb.debian.org/debian unstable/main amd64 libtool all 2.4.7-8 [517 kB] Get: 44 http://deb.debian.org/debian unstable/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian unstable/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian unstable/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 47 http://deb.debian.org/debian unstable/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 48 http://deb.debian.org/debian unstable/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 49 http://deb.debian.org/debian unstable/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 50 http://deb.debian.org/debian unstable/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 51 http://deb.debian.org/debian unstable/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 52 http://deb.debian.org/debian unstable/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 53 http://deb.debian.org/debian unstable/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 54 http://deb.debian.org/debian unstable/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 55 http://deb.debian.org/debian unstable/main amd64 debhelper all 13.20 [915 kB] Get: 56 http://deb.debian.org/debian unstable/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 57 http://deb.debian.org/debian unstable/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 58 http://deb.debian.org/debian unstable/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 59 http://deb.debian.org/debian unstable/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 60 http://deb.debian.org/debian unstable/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 61 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 62 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 63 http://deb.debian.org/debian unstable/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 64 http://deb.debian.org/debian unstable/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 65 http://deb.debian.org/debian unstable/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 66 http://deb.debian.org/debian unstable/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 67 http://deb.debian.org/debian unstable/main amd64 dh-python all 6.20241024 [109 kB] Get: 68 http://deb.debian.org/debian unstable/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 69 http://deb.debian.org/debian unstable/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 70 http://deb.debian.org/debian unstable/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 71 http://deb.debian.org/debian unstable/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 72 http://deb.debian.org/debian unstable/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 73 http://deb.debian.org/debian unstable/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB] Get: 74 http://deb.debian.org/debian unstable/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB] Get: 75 http://deb.debian.org/debian unstable/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB] Get: 76 http://deb.debian.org/debian unstable/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 77 http://deb.debian.org/debian unstable/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 78 http://deb.debian.org/debian unstable/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 79 http://deb.debian.org/debian unstable/main amd64 libcurl3t64-gnutls amd64 8.11.1-1 [360 kB] Get: 80 http://deb.debian.org/debian unstable/main amd64 libprotobuf32t64 amd64 3.21.12-10+b1 [982 kB] Get: 81 http://deb.debian.org/debian unstable/main amd64 libpython3.13-stdlib amd64 3.13.1-2 [1975 kB] Get: 82 http://deb.debian.org/debian unstable/main amd64 libyaml-0-2 amd64 0.2.5-1+b2 [52.7 kB] Get: 83 http://deb.debian.org/debian unstable/main amd64 python3.13 amd64 3.13.1-2 [740 kB] Get: 84 http://deb.debian.org/debian unstable/main amd64 python3-all amd64 3.12.7-1 [1052 B] Get: 85 http://deb.debian.org/debian unstable/main amd64 python3-async-timeout all 5.0.1-1 [8324 B] Get: 86 http://deb.debian.org/debian unstable/main amd64 python3-bcrypt amd64 4.2.0-2.1 [236 kB] Get: 87 http://deb.debian.org/debian unstable/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 88 http://deb.debian.org/debian unstable/main amd64 python3-urllib3 all 2.2.3-4 [112 kB] Get: 89 http://deb.debian.org/debian unstable/main amd64 python3-elasticsearch all 7.17.6-1 [113 kB] Get: 90 http://deb.debian.org/debian unstable/main amd64 python3-charset-normalizer amd64 3.4.0-1+b1 [140 kB] Get: 91 http://deb.debian.org/debian unstable/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 92 http://deb.debian.org/debian unstable/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 93 http://deb.debian.org/debian unstable/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 94 http://deb.debian.org/debian unstable/main amd64 python3-biomaj3-core all 3.0.28-3 [25.1 kB] Get: 95 http://deb.debian.org/debian unstable/main amd64 python3-py-zipkin all 1.2.8-2 [36.4 kB] Get: 96 http://deb.debian.org/debian unstable/main amd64 python3-biomaj3-zipkin all 0.2.2-3 [15.1 kB] Get: 97 http://deb.debian.org/debian unstable/main amd64 python3-consul all 1.5.1+dfsg-1 [22.7 kB] Get: 98 http://deb.debian.org/debian unstable/main amd64 python3-blinker all 1.9.0-1 [12.6 kB] Get: 99 http://deb.debian.org/debian unstable/main amd64 python3-colorama all 0.4.6-4 [36.2 kB] Get: 100 http://deb.debian.org/debian unstable/main amd64 python3-click all 8.1.7-2 [94.3 kB] Get: 101 http://deb.debian.org/debian unstable/main amd64 python3-itsdangerous all 2.2.0-1 [18.0 kB] Get: 102 http://deb.debian.org/debian unstable/main amd64 python3-markupsafe amd64 2.1.5-1+b2 [13.9 kB] Get: 103 http://deb.debian.org/debian unstable/main amd64 python3-jinja2 all 3.1.3-1.1 [120 kB] Get: 104 http://deb.debian.org/debian unstable/main amd64 python3-werkzeug all 3.1.3-2 [207 kB] Get: 105 http://deb.debian.org/debian unstable/main amd64 python3-flask all 3.1.0-2 [106 kB] Get: 106 http://deb.debian.org/debian unstable/main amd64 python3-ftputil all 5.1.0-1 [40.4 kB] Get: 107 http://deb.debian.org/debian unstable/main amd64 python3-humanfriendly all 10.0-6 [85.6 kB] Get: 108 http://deb.debian.org/debian unstable/main amd64 python3-defusedxml all 0.7.1-3 [43.4 kB] Get: 109 http://deb.debian.org/debian unstable/main amd64 python3-wcwidth all 0.2.13+dfsg1-1 [24.9 kB] Get: 110 http://deb.debian.org/debian unstable/main amd64 python3-prettytable all 3.12.0-1 [39.5 kB] Get: 111 http://deb.debian.org/debian unstable/main amd64 python3-six all 1.17.0-1 [16.5 kB] Get: 112 http://deb.debian.org/debian unstable/main amd64 python3-irodsclient all 2.2.0-1 [209 kB] Get: 113 http://deb.debian.org/debian unstable/main amd64 python3-pika all 1.3.2-1 [125 kB] Get: 114 http://deb.debian.org/debian unstable/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 115 http://deb.debian.org/debian unstable/main amd64 python3-prometheus-client all 0.19.0+ds1-1 [35.0 kB] Get: 116 http://deb.debian.org/debian unstable/main amd64 python3-protobuf amd64 3.21.12-10+b1 [271 kB] Get: 117 http://deb.debian.org/debian unstable/main amd64 python3-pycurl amd64 7.45.4-1 [77.7 kB] Get: 118 http://deb.debian.org/debian unstable/main amd64 python3-wrapt amd64 1.15.0-3+b1 [43.8 kB] Get: 119 http://deb.debian.org/debian unstable/main amd64 python3-deprecated all 1.2.15-1 [14.5 kB] Get: 120 http://deb.debian.org/debian unstable/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 121 http://deb.debian.org/debian unstable/main amd64 python3-redis all 4.3.4-4 [185 kB] Get: 122 http://deb.debian.org/debian unstable/main amd64 python3-simpleeval all 1.0.3-1 [24.0 kB] Get: 123 http://deb.debian.org/debian unstable/main amd64 python3-tenacity all 8.4.2+really8.4.1-1 [46.0 kB] Get: 124 http://deb.debian.org/debian unstable/main amd64 python3-yaml amd64 6.0.2-1+b1 [178 kB] Get: 125 http://deb.debian.org/debian unstable/main amd64 python3-biomaj3-download all 3.2.12-1 [49.4 kB] Get: 126 http://deb.debian.org/debian unstable/main amd64 python3-biomaj3-process all 3.0.19-2 [25.2 kB] Get: 127 http://deb.debian.org/debian unstable/main amd64 python3-pyasn1 all 0.6.0-1 [70.0 kB] Get: 128 http://deb.debian.org/debian unstable/main amd64 python3-ldap3 all 2.9.1-2 [235 kB] Get: 129 http://deb.debian.org/debian unstable/main amd64 python3-tabulate all 0.9.0-1 [45.9 kB] Get: 130 http://deb.debian.org/debian unstable/main amd64 python3-biomaj3-user all 3.0.12-2 [19.7 kB] Get: 131 http://deb.debian.org/debian unstable/main amd64 python3-bson all 4.10.1-4 [87.1 kB] Get: 132 http://deb.debian.org/debian unstable/main amd64 python3-dnspython all 2.7.0-1 [164 kB] Get: 133 http://deb.debian.org/debian unstable/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 134 http://deb.debian.org/debian unstable/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 135 http://deb.debian.org/debian unstable/main amd64 python3-pymongo all 4.10.1-4 [272 kB] Get: 136 http://deb.debian.org/debian unstable/main amd64 python3-pytest all 8.3.4-1 [250 kB] Get: 137 http://deb.debian.org/debian unstable/main amd64 python3-yapsy all 1.12.2-3 [30.4 kB] Fetched 42.5 MB in 1s (43.6 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19965 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.8-3_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.8-3) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.8-3_amd64.deb ... Unpacking python3.12-minimal (3.12.8-3) ... Setting up libpython3.12-minimal:amd64 (3.12.8-3) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20285 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.7-1_amd64.deb ... Unpacking python3-minimal (3.12.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.2~rc1-2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-6_all.deb ... Unpacking readline-common (8.2-6) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-6_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-6) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.8-3_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.8-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.8-3_amd64.deb ... Unpacking python3.12 (3.12.8-3) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.7-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.7-1) ... Setting up python3-minimal (3.12.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21348 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.7-1_amd64.deb ... Unpacking python3 (3.12.7-1) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../001-libpython3.13-minimal_3.13.1-2_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.1-2) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../002-python3.13-minimal_3.13.1-2_amd64.deb ... Unpacking python3.13-minimal (3.13.1-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../004-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../005-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../007-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../009-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../010-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../011-groff-base_1.23.0-6_amd64.deb ... Unpacking groff-base (1.23.0-6) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../012-bsdextrautils_2.40.2-12_amd64.deb ... Unpacking bsdextrautils (2.40.2-12) ... Selecting previously unselected package libpipeline1:amd64. 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Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../026-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../027-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../028-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../029-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../030-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../031-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../032-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../033-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../034-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../035-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../036-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. 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Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../049-libldap-2.5-0_2.5.18+dfsg-3+b1_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../050-libnghttp2-14_1.64.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.64.0-1) ... Selecting previously unselected package libnghttp3-9:amd64. Preparing to unpack .../051-libnghttp3-9_1.6.0-2_amd64.deb ... Unpacking libnghttp3-9:amd64 (1.6.0-2) ... Selecting previously unselected package libngtcp2-16:amd64. Preparing to unpack .../052-libngtcp2-16_1.9.1-1_amd64.deb ... Unpacking libngtcp2-16:amd64 (1.9.1-1) ... Selecting previously unselected package libngtcp2-crypto-gnutls8:amd64. Preparing to unpack .../053-libngtcp2-crypto-gnutls8_1.9.1-1_amd64.deb ... Unpacking libngtcp2-crypto-gnutls8:amd64 (1.9.1-1) ... Selecting previously unselected package libpsl5t64:amd64. 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Setting up python3-pyasn1 (0.6.0-1) ... Setting up python3-py-zipkin (1.2.8-2) ... Setting up python3-protobuf (3.21.12-10+b1) ... Setting up python3-pymongo (4.10.1-4) ... Setting up python3-prettytable (3.12.0-1) ... Setting up python3-deprecated (1.2.15-1) ... Setting up python3-yapsy (1.12.2-3) ... Setting up python3-blinker (1.9.0-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-elasticsearch (7.17.6-1) ... Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-ftputil (5.1.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-colorama (0.4.6-4) ... Setting up python3-defusedxml (0.7.1-3) ... Setting up python3-charset-normalizer (3.4.0-1+b1) ... Setting up python3-pika (1.3.2-1) ... Setting up python3-pytest (8.3.4-1) ... Setting up python3-tenacity (8.4.2+really8.4.1-1) ... Setting up python3-bcrypt (4.2.0-2.1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-tabulate (0.9.0-1) ... Setting up python3-itsdangerous (2.2.0-1) ... Setting up python3-all (3.12.7-1) ... Setting up python3-yaml (6.0.2-1+b1) ... Setting up python3-click (8.1.7-2) ... Setting up python3-ldap3 (2.9.1-2) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-prometheus-client (0.19.0+ds1-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-redis (4.3.4-4) ... Setting up python3-irodsclient (2.2.0-1) ... /usr/lib/python3/dist-packages/irods/test/admin_test.py:380: SyntaxWarning: invalid escape sequence '\]' new_password = '''abc123!"#$%&'()*+,-./:;<=>?@[\]^_`{|}~Z''' /usr/lib/python3/dist-packages/irods/test/admin_test.py:406: SyntaxWarning: invalid escape sequence '\]' new_comment = '''comment-abc123!"#$%&'()*+,-./:;<=>?@[\]^_{|}~Z''' # omitting backtick due to #170 /usr/lib/python3/dist-packages/irods/test/admin_test.py:426: SyntaxWarning: invalid escape sequence '\]' new_info = '''info-abc123!"#$%&'()*+,-./:;<=>?@[\]^_{|}~Z''' # omitting backtick due to #170 /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:38: SyntaxWarning: invalid escape sequence '\.' localhost_with_optional_domain_pattern = re.compile('localhost(\.\S\S*)?$') /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:335: SyntaxWarning: invalid escape sequence '\s' NumThreadsRegex = re.compile(u'^num_threads\s*=\s*(\d+)',re.MULTILINE) /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:463: SyntaxWarning: invalid escape sequence '\s' NO_CHECKSUM_MESSAGE_PATTERN = re.compile( 'No\s+Checksum\s+Available.+\s+Replica\s\[(\d+)\]', re.IGNORECASE) /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:857: SyntaxWarning: invalid escape sequence '\S' find_iterator = itertools.chain( re.finditer(u'redirect_to_host = (\S+)', search_text), /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:858: SyntaxWarning: invalid escape sequence '\S' re.finditer(u'target_host = (\S+)', search_text) ) /usr/lib/python3/dist-packages/irods/test/rule_test.py:371: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[0], '.*\[Hello world!\]') /usr/lib/python3/dist-packages/irods/test/rule_test.py:392: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[0], '\[STRING\]\[\]') /usr/lib/python3/dist-packages/irods/test/rule_test.py:393: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[1], '\[STRING\]\[\]') /usr/lib/python3/dist-packages/irods/test/rule_test.py:399: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[0], '\[INTEGER\]\[5\]') /usr/lib/python3/dist-packages/irods/test/rule_test.py:400: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[1], '\[STRING\]\[A String\]') /usr/lib/python3/dist-packages/irods/test/admin_test.py:380: SyntaxWarning: invalid escape sequence '\]' new_password = '''abc123!"#$%&'()*+,-./:;<=>?@[\]^_`{|}~Z''' /usr/lib/python3/dist-packages/irods/test/admin_test.py:406: SyntaxWarning: invalid escape sequence '\]' new_comment = '''comment-abc123!"#$%&'()*+,-./:;<=>?@[\]^_{|}~Z''' # omitting backtick due to #170 /usr/lib/python3/dist-packages/irods/test/admin_test.py:426: SyntaxWarning: invalid escape sequence '\]' new_info = '''info-abc123!"#$%&'()*+,-./:;<=>?@[\]^_{|}~Z''' # omitting backtick due to #170 /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:38: SyntaxWarning: invalid escape sequence '\.' localhost_with_optional_domain_pattern = re.compile('localhost(\.\S\S*)?$') /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:335: SyntaxWarning: invalid escape sequence '\s' NumThreadsRegex = re.compile(u'^num_threads\s*=\s*(\d+)',re.MULTILINE) /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:463: SyntaxWarning: invalid escape sequence '\s' NO_CHECKSUM_MESSAGE_PATTERN = re.compile( 'No\s+Checksum\s+Available.+\s+Replica\s\[(\d+)\]', re.IGNORECASE) /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:857: SyntaxWarning: invalid escape sequence '\S' find_iterator = itertools.chain( re.finditer(u'redirect_to_host = (\S+)', search_text), /usr/lib/python3/dist-packages/irods/test/data_obj_test.py:858: SyntaxWarning: invalid escape sequence '\S' re.finditer(u'target_host = (\S+)', search_text) ) /usr/lib/python3/dist-packages/irods/test/rule_test.py:371: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[0], '.*\[Hello world!\]') /usr/lib/python3/dist-packages/irods/test/rule_test.py:392: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[0], '\[STRING\]\[\]') /usr/lib/python3/dist-packages/irods/test/rule_test.py:393: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[1], '\[STRING\]\[\]') /usr/lib/python3/dist-packages/irods/test/rule_test.py:399: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[0], '\[INTEGER\]\[5\]') /usr/lib/python3/dist-packages/irods/test/rule_test.py:400: SyntaxWarning: invalid escape sequence '\[' self.assertRegexpMatches (lines[1], '\[STRING\]\[A String\]') Setting up python3-pkg-resources (75.2.0-1) ... Setting up python3-setuptools (75.2.0-1) ... Setting up python3-flask (3.1.0-2) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Setting up python3-consul (1.5.1+dfsg-1) ... Setting up dh-python (6.20241024) ... Setting up python3-biomaj3-zipkin (0.2.2-3) ... Setting up python3-biomaj3-core (3.0.28-3) ... Setting up python3-biomaj3-download (3.2.12-1) ... Setting up python3-biomaj3-user (3.0.12-2) ... Setting up python3-biomaj3-process (3.0.19-2) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/1247446/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for unstable I: user script /srv/workspace/pbuilder/1247446/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/biomaj3-3.1.24/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../biomaj3_3.1.24-2_source.changes dpkg-buildpackage: info: source package biomaj3 dpkg-buildpackage: info: source version 3.1.24-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alexandre Detiste dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py clean /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) running clean removing '/build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.13' does not exist -- can't clean it I: pybuild base:311: python3.12 setup.py clean /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) running clean removing '/build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.13 setup.py config /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) running config I: pybuild base:311: python3.12 setup.py config /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3.13 setup.py build /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) running build running build_py creating /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj copying biomaj/__init__.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj copying biomaj/options.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj copying biomaj/mongo_connector.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj copying biomaj/session.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj copying biomaj/workflow.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj copying biomaj/schema_version.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj copying biomaj/notify.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj copying biomaj/bank.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj creating /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/process copying biomaj/process/__init__.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/process copying biomaj/process/metaprocess.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/process copying biomaj/process/processfactory.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/process running egg_info creating biomaj.egg-info writing biomaj.egg-info/PKG-INFO writing dependency_links to biomaj.egg-info/dependency_links.txt writing requirements to biomaj.egg-info/requires.txt writing top-level names to biomaj.egg-info/top_level.txt writing manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' under directory 'biomaj' adding license file 'LICENSE' writing manifest file 'biomaj.egg-info/SOURCES.txt' running build_scripts creating build/scripts-3.13 copying scripts/biomaj_migrate_database.py -> build/scripts-3.13 changing mode of build/scripts-3.13/biomaj_migrate_database.py from 664 to 775 I: pybuild base:311: /usr/bin/python3 setup.py build /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) running build running build_py creating /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj copying biomaj/__init__.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj copying biomaj/options.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj copying biomaj/mongo_connector.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj copying biomaj/session.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj copying biomaj/workflow.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj copying biomaj/schema_version.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj copying biomaj/notify.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj copying biomaj/bank.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj creating /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/process copying biomaj/process/__init__.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/process copying biomaj/process/metaprocess.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/process copying biomaj/process/processfactory.py -> /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/process running egg_info writing biomaj.egg-info/PKG-INFO writing dependency_links to biomaj.egg-info/dependency_links.txt writing requirements to biomaj.egg-info/requires.txt writing top-level names to biomaj.egg-info/top_level.txt reading manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' under directory 'biomaj' adding license file 'LICENSE' writing manifest file 'biomaj.egg-info/SOURCES.txt' running build_scripts creating build/scripts-3.12 copying scripts/biomaj_migrate_database.py -> build/scripts-3.12 changing mode of build/scripts-3.12/biomaj_migrate_database.py from 664 to 775 dh: command-omitted: The call to "dh_auto_test -O--buildsystem=pybuild" was omitted due to "DEB_BUILD_OPTIONS=nocheck" create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_installdirs -O--buildsystem=pybuild dh_auto_install --destdir=debian/python3-biomaj3/ -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3.13 setup.py install --root /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3 /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing biomaj.egg-info/PKG-INFO writing dependency_links to biomaj.egg-info/dependency_links.txt writing requirements to biomaj.egg-info/requires.txt writing top-level names to biomaj.egg-info/top_level.txt reading manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' under directory 'biomaj' adding license file 'LICENSE' writing manifest file 'biomaj.egg-info/SOURCES.txt' running build_scripts running install_lib creating /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages creating /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/__init__.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/options.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj creating /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/process copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/process/__init__.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/process copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/process/metaprocess.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/process copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/process/processfactory.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/process copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/mongo_connector.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/session.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/workflow.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/schema_version.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/notify.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.13_biomaj/build/biomaj/bank.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/options.py to options.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/process/__init__.py to __init__.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/process/metaprocess.py to metaprocess.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/process/processfactory.py to processfactory.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/mongo_connector.py to mongo_connector.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/session.py to session.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/workflow.py to workflow.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/schema_version.py to schema_version.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/notify.py to notify.cpython-313.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj/bank.py to bank.cpython-313.pyc running install_egg_info Copying biomaj.egg-info to /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.13/dist-packages/biomaj-3.1.24.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/bin copying build/scripts-3.13/biomaj_migrate_database.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/bin changing mode of /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/bin/biomaj_migrate_database.py to 775 I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3 /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:261: UserWarning: Unknown distribution option: 'tests_require' warnings.warn(msg) running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing biomaj.egg-info/PKG-INFO writing dependency_links to biomaj.egg-info/dependency_links.txt writing requirements to biomaj.egg-info/requires.txt writing top-level names to biomaj.egg-info/top_level.txt reading manifest file 'biomaj.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching '*.txt' under directory 'biomaj' adding license file 'LICENSE' writing manifest file 'biomaj.egg-info/SOURCES.txt' running build_scripts running install_lib creating /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages creating /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/__init__.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/options.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj creating /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/process copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/process/__init__.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/process copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/process/metaprocess.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/process copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/process/processfactory.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/process copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/mongo_connector.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/session.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/workflow.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/schema_version.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/notify.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj copying /build/reproducible-path/biomaj3-3.1.24/.pybuild/cpython3_3.12_biomaj/build/biomaj/bank.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/options.py to options.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/process/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/process/metaprocess.py to metaprocess.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/process/processfactory.py to processfactory.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/mongo_connector.py to mongo_connector.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/session.py to session.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/workflow.py to workflow.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/schema_version.py to schema_version.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/notify.py to notify.cpython-312.pyc byte-compiling /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj/bank.py to bank.cpython-312.pyc running install_egg_info Copying biomaj.egg-info to /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/lib/python3.12/dist-packages/biomaj-3.1.24.egg-info Skipping SOURCES.txt running install_scripts copying build/scripts-3.12/biomaj_migrate_database.py -> /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/bin changing mode of /build/reproducible-path/biomaj3-3.1.24/debian/python3-biomaj3/usr/bin/biomaj_migrate_database.py to 775 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/biomaj3-3.1.24' dh_install sed -i '1s;^;#!/usr/bin/python3\n;' debian/python3-biomaj3/usr/bin/biomaj_migrate_database.py make[1]: Leaving directory '/build/reproducible-path/biomaj3-3.1.24' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installexamples make[1]: Entering directory '/build/reproducible-path/biomaj3-3.1.24' dh_installexamples sed -i '1s;^;#!/bin/bash\n;' debian/python3-biomaj3/usr/share/doc/python3-biomaj3/examples/tools/process/concat.sh chmod -x debian/python3-biomaj3/usr/share/doc/python3-biomaj3/examples/global.properties.example make[1]: Leaving directory '/build/reproducible-path/biomaj3-3.1.24' dh_python3 -O--buildsystem=pybuild I: dh_python3 pydist:316: Cannot find package that provides py_bcrypt. Please add package that provides it to Build-Depends or add "py_bcrypt python3-py-bcrypt" line to debian/py3dist-overrides or add proper dependency to Depends by hand and ignore this info. dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Recommends field of package python3-biomaj3: substitution variable ${python3:Recommends} used, but is not defined dpkg-gencontrol: warning: Suggests field of package python3-biomaj3: substitution variable ${python3:Suggests} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-biomaj3' in '../python3-biomaj3_3.1.24-2_all.deb'. dpkg-genbuildinfo --build=binary -O../biomaj3_3.1.24-2_amd64.buildinfo dpkg-genchanges --build=binary -O../biomaj3_3.1.24-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/1247446/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/1247446/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1247446 and its subdirectories I: Current time: Mon Dec 16 11:06:54 +14 2024 I: pbuilder-time-stamp: 1734296814