I: pbuilder: network access will be disabled during build I: Current time: Sat May 17 02:12:25 +14 2025 I: pbuilder-time-stamp: 1747397545 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [r-cran-gert_2.0.1+dfsg-1.dsc] I: copying [./r-cran-gert_2.0.1+dfsg.orig.tar.xz] I: copying [./r-cran-gert_2.0.1+dfsg-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Dec 19 00:56:55 2023 gpgv: using RSA key 73471499CC60ED9EEE805946C5BD6C8F2295D502 gpgv: issuer "plessy@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./r-cran-gert_2.0.1+dfsg-1.dsc: no acceptable signature found dpkg-source: info: extracting r-cran-gert in r-cran-gert-2.0.1+dfsg dpkg-source: info: unpacking r-cran-gert_2.0.1+dfsg.orig.tar.xz dpkg-source: info: unpacking r-cran-gert_2.0.1+dfsg-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/73675/tmp/hooks/D01_modify_environment starting debug: Running on ionos6-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 May 16 12:15 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/73675/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/73675/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=21 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=b82f27f01ccb4c21afea6416a09f7ecb LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=73675 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XH3FUvVu/pbuilderrc_pkZ3 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XH3FUvVu/b2 --logfile b2/build.log r-cran-gert_2.0.1+dfsg-1.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://85.184.249.68:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-18-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.76-1 (2024-02-01) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 14 17:47 /bin -> usr/bin I: user script /srv/workspace/pbuilder/73675/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-askpass, r-cran-credentials, r-cran-openssl (>= 2.0.3), r-cran-rstudioapi, r-cran-sys, r-cran-zip, libgit2-dev, r-cran-knitr, r-cran-markdown dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19874 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-cran-askpass; however: Package r-cran-askpass is not installed. pbuilder-satisfydepends-dummy depends on r-cran-credentials; however: Package r-cran-credentials is not installed. pbuilder-satisfydepends-dummy depends on r-cran-openssl (>= 2.0.3); however: Package r-cran-openssl is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rstudioapi; however: Package r-cran-rstudioapi is not installed. pbuilder-satisfydepends-dummy depends on r-cran-sys; however: Package r-cran-sys is not installed. pbuilder-satisfydepends-dummy depends on r-cran-zip; however: Package r-cran-zip is not installed. pbuilder-satisfydepends-dummy depends on libgit2-dev; however: Package libgit2-dev is not installed. pbuilder-satisfydepends-dummy depends on r-cran-knitr; however: Package r-cran-knitr is not installed. pbuilder-satisfydepends-dummy depends on r-cran-markdown; however: Package r-cran-markdown is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-glyphicons-halflings{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-13{a} gfortran-13-i686-linux-gnu{a} gfortran-i686-linux-gnu{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libclone-perl{a} libcurl3-gnutls{a} libcurl4{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-13-dev{a} libgfortran5{a} libgit2-1.7{a} libgit2-dev{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-parser-dev{a} libhttp-parser2.9{a} libice6{a} libicu-dev{a} libicu72{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-bootstrap{a} libjs-highlight.js{a} libjs-jquery{a} libjs-jquery-datatables{a} libjs-mathjax{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} liblerc4{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libmbedcrypto7{a} libmbedtls-dev{a} libmbedtls14{a} libmbedx509-1{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses6{a} libnghttp2-14{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng-dev{a} libpng16-16{a} libpsl5{a} libreadline-dev{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libsm6{a} libssh2-1{a} libssh2-1-dev{a} libssl-dev{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libsub-override-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff6{a} libtimedate-perl{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libvariable-magic-perl{a} libwebp7{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6{a} m4{a} man-db{a} node-normalize.css{a} openssl{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} r-base-core{a} r-base-dev{a} r-cran-askpass{a} r-cran-commonmark{a} r-cran-credentials{a} r-cran-curl{a} r-cran-evaluate{a} r-cran-highr{a} r-cran-jsonlite{a} r-cran-knitr{a} r-cran-markdown{a} r-cran-openssl{a} r-cran-rstudioapi{a} r-cran-sys{a} r-cran-xfun{a} r-cran-yaml{a} r-cran-zip{a} readline-common{a} sensible-utils{a} tzdata{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage javascript-common libarchive-cpio-perl libclass-c3-xs-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libio-compress-brotli-perl libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpng-tools libsasl2-modules libx11-protocol-perl lynx node-highlight.js publicsuffix r-cran-bslib r-cran-codetools r-cran-covr r-cran-dbi r-cran-digest r-cran-formatr r-cran-ggplot2 r-cran-gridsvg r-cran-htmltools r-cran-htmlwidgets r-cran-httpuv r-cran-httr r-cran-jpeg r-cran-later r-cran-lattice r-cran-magick r-cran-magrittr r-cran-mime r-cran-png r-cran-r.rsp r-cran-ragg r-cran-rcurl r-cran-remotes r-cran-renv r-cran-reticulate r-cran-rgl r-cran-rlang r-cran-rmarkdown r-cran-runit r-cran-sass r-cran-sf r-cran-sodium r-cran-spelling r-cran-svglite r-cran-testit r-cran-testthat r-cran-tibble r-cran-tikzdevice r-cran-tinytex r-cran-vctrs r-cran-webshot r-cran-webutils r-cran-withr r-cran-xml2 r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 208 newly installed, 0 to remove and 0 not upgraded. Need to get 120 MB of archives. After unpacking 389 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 tzdata all 2024a-1 [255 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-3 [69.1 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 openssl i386 3.1.5-1 [1246 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 ca-certificates all 20240203 [158 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-2+b1 [314 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 libmagic1 i386 1:5.45-2+b1 [114 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-2+b1 [43.0 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-3 [1195 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.39.3-6 [93.3 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.0-3 [1413 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 ucf all 3.0043+nmu1 [55.2 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 dctrl-tools i386 2.24-3 [105 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 29 http://deb.debian.org/debian trixie/main i386 libelf1 i386 0.190-1+b1 [182 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1 [118 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b2 [727 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 zip i386 3.0-13 [236 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 unzip i386 6.0-28 [166 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libpaper1 i386 1.1.29 [12.7 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libpaper-utils i386 1.1.29 [8972 B] Get: 41 http://deb.debian.org/debian trixie/main i386 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-3 [140 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.5.0-2+b2 [104 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libpng16-16 i386 1.6.43-1 [285 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libfreetype6 i386 2.13.2+dfsg-1+b1 [449 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 libbsd0 i386 0.12.2-1 [134 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.15-1 [148 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.7-1 [822 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 libxcb-render0 i386 1.15-1 [116 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 libxcb-shm0 i386 1.15-1 [106 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 libxrender1 i386 1:0.9.10-1.1 [34.1 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libcairo2 i386 1.18.0-1+b1 [587 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-4+b1 [20.7 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-4+b1 [60.7 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5+b3 [196 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.59.0-1 [82.5 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 libpsl5 i386 0.21.2-1+b1 [59.7 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 libssh2-1 i386 1.11.0-4 [224 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 libcurl4 i386 8.5.0-2 [463 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 libglib2.0-0 i386 2.78.4-1 [1520 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-2+b2 [169 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14-20240201-3 [733 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-3 [2167 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 fontconfig i386 2.15.0-1.1 [462 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 libfribidi0 i386 1.0.13-3+b1 [71.8 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 libharfbuzz0b i386 8.3.0-2 [2234 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 libthai-data all 0.1.29-2 [168 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 libdatrie1 i386 0.2.13-3 [39.5 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 libthai0 i386 0.1.29-2 [50.1 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 libpango-1.0-0 i386 1.52.0+ds-1 [224 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 libpangoft2-1.0-0 i386 1.52.0+ds-1 [51.0 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 libpangocairo-1.0-0 i386 1.52.0+ds-1 [35.9 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 libreadline8 i386 8.2-3+b1 [171 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 libtcl8.6 i386 8.6.14+dfsg-1 [1095 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 libsharpyuv0 i386 1.3.2-0.4 [107 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 libwebp7 i386 1.3.2-0.4 [314 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 libtiff6 i386 4.5.1+git230720-4 [338 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 libxft2 i386 2.3.6-1+b1 [55.3 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 x11-common all 1:7.7+23 [252 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 libxss1 i386 1:1.2.3-1 [18.1 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 libtk8.6 i386 8.6.14-1 [826 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 libice6 i386 2:1.0.10-1 [60.8 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 libxt6 i386 1:1.2.1-1.1 [192 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 r-base-core i386 4.3.2-1 [26.9 MB] Get: 101 http://deb.debian.org/debian trixie/main i386 libgfortran-13-dev i386 13.2.0-13 [783 kB] Get: 102 http://deb.debian.org/debian trixie/main i386 gfortran-13-i686-linux-gnu i386 13.2.0-13 [11.1 MB] Get: 103 http://deb.debian.org/debian trixie/main i386 gfortran-13 i386 13.2.0-13 [10.5 kB] Get: 104 http://deb.debian.org/debian trixie/main i386 gfortran-i686-linux-gnu i386 4:13.2.0-7 [1280 B] Get: 105 http://deb.debian.org/debian trixie/main i386 gfortran i386 4:13.2.0-7 [1432 B] Get: 106 http://deb.debian.org/debian trixie/main i386 libblas-dev i386 3.12.0-3 [152 kB] Get: 107 http://deb.debian.org/debian trixie/main i386 liblapack-dev i386 3.12.0-3 [4400 kB] Get: 108 http://deb.debian.org/debian trixie/main i386 libncurses6 i386 6.4+20240113-1 [111 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 libncurses-dev i386 6.4+20240113-1 [380 kB] Get: 110 http://deb.debian.org/debian trixie/main i386 libreadline-dev i386 8.2-3+b1 [164 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo-dev i386 1:2.1.5-2+b2 [303 kB] Get: 112 http://deb.debian.org/debian trixie/main i386 libjpeg-dev i386 1:2.1.5-2+b2 [72.1 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 libpcre2-16-0 i386 10.42-4+b1 [244 kB] Get: 114 http://deb.debian.org/debian trixie/main i386 libpcre2-32-0 i386 10.42-4+b1 [233 kB] Get: 115 http://deb.debian.org/debian trixie/main i386 libpcre2-posix3 i386 10.42-4+b1 [55.8 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 libpcre2-dev i386 10.42-4+b1 [759 kB] Get: 117 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg-3+b1 [915 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 libpng-dev i386 1.6.43-1 [369 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 libbz2-dev i386 1.0.8-5.1 [31.4 kB] Get: 120 http://deb.debian.org/debian trixie/main i386 liblzma-dev i386 5.6.1+really5.4.5-1 [304 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 icu-devtools i386 72.1-4+b1 [216 kB] Get: 122 http://deb.debian.org/debian trixie/main i386 libicu-dev i386 72.1-4+b1 [10.6 MB] Get: 123 http://deb.debian.org/debian trixie/main i386 libxmuu1 i386 2:1.1.3-3 [24.1 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 xauth i386 1:1.1.2-1 [36.7 kB] Get: 125 http://deb.debian.org/debian trixie/main i386 libpkgconf3 i386 1.8.1-1+b2 [38.5 kB] Get: 126 http://deb.debian.org/debian trixie/main i386 pkgconf-bin i386 1.8.1-1+b2 [30.2 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 pkgconf i386 1.8.1-1+b2 [26.2 kB] Get: 128 http://deb.debian.org/debian trixie/main i386 pkg-config i386 1.8.1-1+b2 [14.0 kB] Get: 129 http://deb.debian.org/debian trixie/main i386 r-base-dev all 4.3.2-1 [4504 B] Get: 130 http://deb.debian.org/debian trixie/main i386 libfile-which-perl all 1.27-2 [15.1 kB] Get: 131 http://deb.debian.org/debian trixie/main i386 libswitch-perl all 2.17-3 [20.3 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 libclone-perl i386 0.46-1+b1 [13.9 kB] Get: 133 http://deb.debian.org/debian trixie/main i386 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 134 http://deb.debian.org/debian trixie/main i386 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 136 http://deb.debian.org/debian trixie/main i386 libio-html-perl all 1.004-3 [16.2 kB] Get: 137 http://deb.debian.org/debian trixie/main i386 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 liburi-perl all 5.28-1 [98.6 kB] Get: 139 http://deb.debian.org/debian trixie/main i386 libhttp-message-perl all 6.45-1 [82.0 kB] Get: 140 http://deb.debian.org/debian trixie/main i386 libparams-util-perl i386 1.102-2+b2 [24.7 kB] Get: 141 http://deb.debian.org/debian trixie/main i386 libsub-install-perl all 0.929-1 [10.5 kB] Get: 142 http://deb.debian.org/debian trixie/main i386 libdata-optlist-perl all 0.114-1 [10.6 kB] Get: 143 http://deb.debian.org/debian trixie/main i386 libb-hooks-op-check-perl i386 0.22-2+b2 [10.7 kB] Get: 144 http://deb.debian.org/debian trixie/main i386 libdynaloader-functions-perl all 0.003-3 [12.7 kB] Get: 145 http://deb.debian.org/debian trixie/main i386 libdevel-callchecker-perl i386 0.008-2+b1 [15.1 kB] Get: 146 http://deb.debian.org/debian trixie/main i386 libparams-classify-perl i386 0.015-2+b2 [23.1 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 libmodule-runtime-perl all 0.016-2 [19.6 kB] Get: 148 http://deb.debian.org/debian trixie/main i386 libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 libmodule-implementation-perl all 0.09-2 [12.6 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 libpackage-stash-perl all 0.40-1 [22.0 kB] Get: 151 http://deb.debian.org/debian trixie/main i386 libclass-load-perl all 0.25-2 [15.3 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 libclass-load-xs-perl i386 0.10-2+b2 [14.3 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 libsub-exporter-progressive-perl all 0.001013-3 [7496 B] Get: 154 http://deb.debian.org/debian trixie/main i386 libdevel-globaldestruction-perl all 0.14-4 [7144 B] Get: 155 http://deb.debian.org/debian trixie/main i386 libalgorithm-c3-perl all 0.11-2 [10.8 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 libclass-c3-perl all 0.35-2 [21.0 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libmro-compat-perl all 0.15-2 [11.8 kB] Get: 158 http://deb.debian.org/debian trixie/main i386 libdevel-overloadinfo-perl all 0.007-1 [7896 B] Get: 159 http://deb.debian.org/debian trixie/main i386 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 libsub-exporter-perl all 0.990-1 [50.6 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libeval-closure-perl all 0.14-3 [11.2 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 libdist-checkconflicts-perl all 0.11-2 [10.5 kB] Get: 163 http://deb.debian.org/debian trixie/main i386 libmodule-runtime-conflicts-perl all 0.003-2 [7356 B] Get: 164 http://deb.debian.org/debian trixie/main i386 libpackage-deprecationmanager-perl all 0.18-1 [17.6 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 libpackage-stash-xs-perl i386 0.30-1+b2 [20.5 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libmoose-perl i386 2.2207-1 [766 kB] Get: 167 http://deb.debian.org/debian trixie/main i386 libvariable-magic-perl i386 0.63-1+b2 [44.5 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 libb-hooks-endofscope-perl all 0.28-1 [17.5 kB] Get: 169 http://deb.debian.org/debian trixie/main i386 libsub-identify-perl i386 0.14-3+b1 [11.2 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libsub-name-perl i386 0.27-1+b1 [12.6 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 libnamespace-clean-perl all 0.27-2 [17.8 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 libcurl3-gnutls i386 8.5.0-2 [454 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libwww-curl-perl i386 4.17-10+b1 [61.4 kB] Get: 174 http://deb.debian.org/debian trixie/main i386 libwww-curl-simple-perl all 0.100191-3 [12.6 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 dh-r all 20231212 [42.2 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-3 [162 kB] Get: 177 http://deb.debian.org/debian trixie/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libhttp-parser2.9 i386 2.9.4-6+b1 [21.3 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 libmbedcrypto7 i386 2.28.7-1 [295 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libmbedx509-1 i386 2.28.7-1 [131 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libmbedtls14 i386 2.28.7-1 [169 kB] Get: 182 http://deb.debian.org/debian trixie/main i386 libgit2-1.7 i386 1.7.2+ds-1 [568 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 libmbedtls-dev i386 2.28.7-1 [718 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 libssl-dev i386 3.1.5-1 [2502 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 libssh2-1-dev i386 1.11.0-4 [367 kB] Get: 186 http://deb.debian.org/debian trixie/main i386 libhttp-parser-dev i386 2.9.4-6+b1 [22.1 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 libgit2-dev i386 1.7.2+ds-1 [869 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 libjs-bootstrap all 3.4.1+dfsg-3 [172 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 libjs-highlight.js all 9.18.5+dfsg1-2 [397 kB] Get: 190 http://deb.debian.org/debian trixie/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 libjs-jquery-datatables all 1.11.5+dfsg-2 [144 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 193 http://deb.debian.org/debian trixie/main i386 node-normalize.css all 8.0.1-5 [12.7 kB] Get: 194 http://deb.debian.org/debian trixie/main i386 r-cran-sys i386 3.4.2-1 [44.0 kB] Get: 195 http://deb.debian.org/debian trixie/main i386 r-cran-askpass i386 1.2.0-1 [24.1 kB] Get: 196 http://deb.debian.org/debian trixie/main i386 r-cran-commonmark i386 1.9.1-1 [123 kB] Get: 197 http://deb.debian.org/debian trixie/main i386 r-cran-openssl i386 2.1.1+dfsg-2 [400 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 r-cran-curl i386 5.2.0+dfsg-1 [178 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 r-cran-jsonlite i386 1.8.8+dfsg-1 [446 kB] Get: 200 http://deb.debian.org/debian trixie/main i386 r-cran-credentials all 2.0.1-1 [216 kB] Get: 201 http://deb.debian.org/debian trixie/main i386 r-cran-evaluate all 0.23-1 [90.6 kB] Get: 202 http://deb.debian.org/debian trixie/main i386 r-cran-xfun i386 0.41+dfsg-1 [416 kB] Get: 203 http://deb.debian.org/debian trixie/main i386 r-cran-highr all 0.10+dfsg-1 [38.1 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 r-cran-yaml i386 2.3.8-1 [111 kB] Get: 205 http://deb.debian.org/debian trixie/main i386 r-cran-knitr all 1.45+dfsg-1 [922 kB] Get: 206 http://deb.debian.org/debian trixie/main i386 r-cran-markdown all 1.12+dfsg-1 [179 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 r-cran-rstudioapi all 0.15.0-1 [282 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 r-cran-zip i386 2.3.1-1 [125 kB] Fetched 120 MB in 17s (7066 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package tzdata. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19874 files and directories currently installed.) Preparing to unpack .../000-tzdata_2024a-1_all.deb ... Unpacking tzdata (2024a-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../001-readline-common_8.2-3_all.deb ... Unpacking readline-common (8.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../003-openssl_3.1.5-1_i386.deb ... Unpacking openssl (3.1.5-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../004-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../006-libmagic1_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic1:i386 (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.45-2+b1_i386.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.21-14+b1_i386.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../009-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../010-groff-base_1.23.0-3_i386.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../011-bsdextrautils_2.39.3-6_i386.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../012-libpipeline1_1.5.7-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../013-man-db_2.12.0-3_i386.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package ucf. Preparing to unpack .../014-ucf_3.0043+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0043+nmu1) ... Selecting previously unselected package m4. 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Setting up libclone-perl:i386 (0.46-1+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libsub-identify-perl (0.14-3+b1) ... Setting up libglib2.0-0:i386 (2.78.4-1) ... No schema files found: doing nothing. Setting up fonts-glyphicons-halflings (1.009~3.4.1+dfsg-3) ... Setting up unzip (6.0-28) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:i386 (1.1.0-2+b3) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libtry-tiny-perl (0.31-2) ... Setting up libnghttp2-14:i386 (1.59.0-1) ... Setting up libmagic1:i386 (1:5.45-2+b1) ... Setting up libdeflate0:i386 (1.20-1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-2+b1) ... Setting up libjbig0:i386 (2.1-6.1+b1) ... Setting up libpcre2-16-0:i386 (10.42-4+b1) ... Setting up libsub-install-perl (0.929-1) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-4+b1) ... Setting up tzdata (2024a-1) ... Current default time zone: 'Etc/UTC' Local time is now: Fri May 16 12:28:27 UTC 2025. Universal Time is now: Fri May 16 12:28:27 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up zip (3.0-13) ... Setting up libpackage-stash-xs-perl:i386 (0.30-1+b2) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:i386 (10.42-4+b1) ... Setting up libblas3:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libpkgconf3:i386 (1.8.1-1+b2) ... Setting up libalgorithm-c3-perl (0.11-2) ... Setting up libjpeg62-turbo:i386 (1:2.1.5-2+b2) ... Setting up libswitch-perl (2.17-3) ... Setting up libmbedcrypto7:i386 (2.28.7-1) ... Setting up libx11-data (2:1.8.7-1) ... Setting up libjpeg62-turbo-dev:i386 (1:2.1.5-2+b2) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncurses6:i386 (6.4+20240113-1) ... Setting up libfribidi0:i386 (1.0.13-3+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libssl-dev:i386 (3.1.5-1) ... Setting up libpng16-16:i386 (1.6.43-1) ... Setting up libvariable-magic-perl (0.63-1+b2) ... Setting up libio-html-perl (1.004-3) ... Setting up libtcl8.6:i386 (8.6.14+dfsg-1) ... Setting up autopoint (0.21-14) ... Setting up libb-hooks-op-check-perl:i386 (0.22-2+b2) ... Setting up icu-devtools (72.1-4+b1) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up pkgconf-bin (1.8.1-1+b2) ... Setting up libparams-util-perl (1.102-2+b2) ... Setting up libsasl2-2:i386 (2.1.28+dfsg1-4+b1) ... Setting up libgfortran5:i386 (14-20240201-3) ... Setting up autoconf (2.71-3) ... Setting up libsub-exporter-progressive-perl (0.001013-3) ... Setting up libwebp7:i386 (1.3.2-0.4) ... Setting up libtimedate-perl (2.3300-2) ... Setting up liblzma-dev:i386 (5.6.1+really5.4.5-1) ... Setting up libsub-name-perl:i386 (0.27-1+b1) ... Setting up zlib1g-dev:i386 (1:1.3.dfsg-3+b1) ... Setting up libpcre2-posix3:i386 (10.42-4+b1) ... Setting up libjs-highlight.js (9.18.5+dfsg1-2) ... Setting up sensible-utils (0.0.22) ... Setting up libtiff6:i386 (4.5.1+git230720-4) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libthai-data (0.1.29-2) ... Setting up libdevel-globaldestruction-perl (0.14-4) ... Setting up libssh2-1:i386 (1.11.0-4) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libgfortran-13-dev:i386 (13.2.0-13) ... Setting up openssl (3.1.5-1) ... Setting up libbsd0:i386 (0.12.2-1) ... Setting up node-normalize.css (8.0.1-5) ... Setting up libelf1:i386 (0.190-1+b1) ... Setting up readline-common (8.2-3) ... Setting up libicu-dev:i386 (72.1-4+b1) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Setting up xdg-utils (1.1.3-4.1) ... update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode Setting up liburi-perl (5.28-1) ... Setting up libblas-dev:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up dctrl-tools (2.24-3) ... Setting up libjs-bootstrap (3.4.1+dfsg-3) ... Setting up libhttp-parser2.9:i386 (2.9.4-6+b1) ... Setting up libbz2-dev:i386 (1.0.8-5.1) ... Setting up gfortran-13-i686-linux-gnu (13.2.0-13) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libhttp-parser-dev:i386 (2.9.4-6+b1) ... Setting up libice6:i386 (2:1.0.10-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up libxdmcp6:i386 (1:1.1.2-3) ... Setting up liblapack3:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/i386-linux-gnu/liblapack.so.3 (liblapack.so.3-i386-linux-gnu) in auto mode Setting up libncurses-dev:i386 (6.4+20240113-1) ... Setting up libxcb1:i386 (1.15-1) ... Setting up gettext (0.21-14+b1) ... Setting up libmbedx509-1:i386 (2.28.7-1) ... Setting up libpcre2-dev:i386 (10.42-4+b1) ... Setting up libmbedtls14:i386 (2.28.7-1) ... Setting up libtool (2.4.7-7) ... Setting up libxcb-render0:i386 (1.15-1) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libreadline8:i386 (8.2-3+b1) ... Setting up libpng-dev:i386 (1.6.43-1) ... Setting up libjpeg-dev:i386 (1:2.1.5-2+b2) ... Setting up libxcb-shm0:i386 (1.15-1) ... Setting up libmbedtls-dev:i386 (2.28.7-1) ... Setting up libclass-c3-perl (0.35-2) ... Setting up libreadline-dev:i386 (8.2-3+b1) ... Setting up libdevel-callchecker-perl:i386 (0.008-2+b1) ... Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5+b3) ... Setting up libjs-jquery-datatables (1.11.5+dfsg-2) ... Setting up pkgconf:i386 (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libthai0:i386 (0.1.29-2) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libfreetype6:i386 (2.13.2+dfsg-1+b1) ... Setting up gfortran-i686-linux-gnu (4:13.2.0-7) ... Setting up gfortran-13 (13.2.0-13) ... Setting up liblapack-dev:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/lapack/liblapack.so to provide /usr/lib/i386-linux-gnu/liblapack.so (liblapack.so-i386-linux-gnu) in auto mode Setting up libdata-optlist-perl (0.114-1) ... Setting up pkg-config:i386 (1.8.1-1+b2) ... Setting up ucf (3.0043+nmu1) ... Setting up libssh2-1-dev:i386 (1.11.0-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up libgit2-1.7:i386 (1.7.2+ds-1) ... Setting up libcurl4:i386 (8.5.0-2) ... Setting up libx11-6:i386 (2:1.8.7-1) ... Setting up libharfbuzz0b:i386 (8.3.0-2) ... Setting up libfontconfig1:i386 (2.15.0-1.1) ... Setting up libmro-compat-perl (0.15-2) ... Setting up libsm6:i386 (2:1.2.3-1) ... Setting up libxmuu1:i386 (2:1.1.3-3) ... Setting up libsub-exporter-perl (0.990-1) ... Setting up libgit2-dev:i386 (1.7.2+ds-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libeval-closure-perl (0.14-3) ... Setting up libpaper1:i386 (1.1.29) ... Creating config file /etc/papersize with new version Setting up fontconfig (2.15.0-1.1) ... Regenerating fonts cache... done. Setting up libxrender1:i386 (1:0.9.10-1.1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libparams-classify-perl:i386 (0.015-2+b2) ... Setting up libpango-1.0-0:i386 (1.52.0+ds-1) ... Setting up libxext6:i386 (2:1.3.4-1+b1) ... Setting up libcurl3-gnutls:i386 (8.5.0-2) ... Setting up libpaper-utils (1.1.29) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:13.2.0-7) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libcairo2:i386 (1.18.0-1+b1) ... Setting up libmodule-runtime-perl (0.016-2) ... Setting up libdist-checkconflicts-perl (0.11-2) ... Setting up libxt6:i386 (1:1.2.1-1.1) ... Setting up xauth (1:1.1.2-1) ... Setting up libxss1:i386 (1:1.2.3-1) ... Setting up libpangoft2-1.0-0:i386 (1.52.0+ds-1) ... Setting up libpangocairo-1.0-0:i386 (1.52.0+ds-1) ... Setting up libxft2:i386 (2.3.6-1+b1) ... Setting up libmodule-implementation-perl (0.09-2) ... Setting up libpackage-stash-perl (0.40-1) ... Setting up libtk8.6:i386 (8.6.14-1) ... Setting up libwww-curl-perl:i386 (4.17-10+b1) ... Setting up debhelper (13.15.3) ... Setting up libmodule-runtime-conflicts-perl (0.003-2) ... Setting up libclass-load-perl (0.25-2) ... Setting up r-base-core (4.3.2-1) ... Creating config file /etc/R/Renviron with new version Setting up r-cran-zip (2.3.1-1) ... Setting up libpackage-deprecationmanager-perl (0.18-1) ... Setting up libdevel-overloadinfo-perl (0.007-1) ... Setting up libclass-load-xs-perl (0.10-2+b2) ... Setting up r-cran-commonmark (1.9.1-1) ... Setting up libb-hooks-endofscope-perl (0.28-1) ... Setting up r-cran-curl (5.2.0+dfsg-1) ... Setting up r-base-dev (4.3.2-1) ... Setting up r-cran-xfun (0.41+dfsg-1) ... Setting up r-cran-sys (3.4.2-1) ... Setting up libmoose-perl:i386 (2.2207-1) ... Setting up r-cran-yaml (2.3.8-1) ... Setting up r-cran-evaluate (0.23-1) ... Setting up r-cran-highr (0.10+dfsg-1) ... Setting up r-cran-askpass (1.2.0-1) ... Setting up r-cran-jsonlite (1.8.8+dfsg-1) ... Setting up r-cran-rstudioapi (0.15.0-1) ... Setting up r-cran-markdown (1.12+dfsg-1) ... Setting up libnamespace-clean-perl (0.27-2) ... Setting up r-cran-knitr (1.45+dfsg-1) ... Setting up r-cran-openssl (2.1.1+dfsg-2) ... Setting up libwww-curl-simple-perl (0.100191-3) ... Setting up r-cran-credentials (2.0.1-1) ... Setting up dh-r (20231212) ... Processing triggers for libc-bin (2.37-15) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/73675/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/73675/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/r-cran-gert-2.0.1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../r-cran-gert_2.0.1+dfsg-1_source.changes dpkg-buildpackage: info: source package r-cran-gert dpkg-buildpackage: info: source version 2.0.1+dfsg-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Charles Plessy dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary dh binary --buildsystem R dh_update_autotools_config -O--buildsystem=R dh_autoreconf -O--buildsystem=R dh_auto_configure -O--buildsystem=R dh_auto_build -O--buildsystem=R debian/rules execute_after_dh_auto_build make[1]: Entering directory '/build/reproducible-path/r-cran-gert-2.0.1+dfsg' cd inst/doc && Rscript -e "require(knitr); require(markdown); knit('gert.Rmd', 'gert.md'); markdownToHTML('gert.md', 'gert.html', options=c('use_xhtml', 'base64_images'));" && rm -f gert.md Loading required package: knitr Loading required package: markdown processing file: gert.Rmd 1/16 2/16 [unnamed-chunk-1] 3/16 4/16 [setup] 5/16 6/16 [unnamed-chunk-2] 7/16 8/16 [unnamed-chunk-3] 9/16 10/16 [unnamed-chunk-4] 11/16 12/16 [unnamed-chunk-5] 13/16 14/16 [unnamed-chunk-6] 15/16 16/16 [unnamed-chunk-7] output file: gert.md [1] "gert.md" make[1]: Leaving directory '/build/reproducible-path/r-cran-gert-2.0.1+dfsg' dh_auto_test -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=R dh_prep -O--buildsystem=R dh_auto_install --destdir=debian/r-cran-gert/ -O--buildsystem=R I: R packages needed for DEP8: spelling, rmarkdown, testthat, ca-certificates I: R Package: gert Version: 2.0.1 I: Building using R version 4.3.2-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Tue, 19 Dec 2023 00:08:20 +0000 mkdir -p /build/reproducible-path/r-cran-gert-2.0.1\+dfsg/debian/r-cran-gert/usr/lib/R/site-library R CMD INSTALL -l /build/reproducible-path/r-cran-gert-2.0.1\+dfsg/debian/r-cran-gert/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 19 Dec 2023 00:08:20 +0000'" * installing *source* package 'gert' ... file 'inst/doc/gert.html' has the wrong MD5 checksum ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS= Using PKG_LIBS=-lgit2 Configuration OK! ** libs using C compiler: 'gcc (Debian 13.2.0-13) 13.2.0' make[1]: Entering directory '/build/reproducible-path/r-cran-gert-2.0.1+dfsg/src' rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o ignore.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c branch.c -o branch.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c clone.c -o clone.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c commit.c -o commit.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c config.c -o config.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c conflicts.c -o conflicts.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c files.c -o files.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c ignore.c -o ignore.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c init.c -o init.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c merge.c -o merge.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c rebase.c -o rebase.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c stash.c -o stash.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c submodules.c -o submodules.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c tag.c -o tag.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c utils.c -o utils.o gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.3.2=. -fstack-protector-strong -Wformat -Werror=format-security -ffloat-store -g1 -Wdate-time -D_FORTIFY_SOURCE=2 -c version.c -o version.o gcc -shared -L/usr/lib/R/lib -Wl,-z,relro -o gert.so branch.o clone.o commit.o config.o conflicts.o files.o ignore.o init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o -lgit2 -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/reproducible-path/r-cran-gert-2.0.1+dfsg/src' make[1]: Entering directory '/build/reproducible-path/r-cran-gert-2.0.1+dfsg/src' make[1]: Leaving directory '/build/reproducible-path/r-cran-gert-2.0.1+dfsg/src' installing to /build/reproducible-path/r-cran-gert-2.0.1+dfsg/debian/r-cran-gert/usr/lib/R/site-library/00LOCK-r-cran-gert-2.0.1+dfsg/00new/gert/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gert) rm -f /build/reproducible-path/r-cran-gert-2.0.1\+dfsg/debian/r-cran-gert/usr/lib/R/site-library/gert/LICENSE I: Using r-cran-spelling for Recommends:spelling I: Using r-cran-rmarkdown for Recommends:rmarkdown I: Using r-cran-testthat for Recommends:testthat W: Please install devscripts to enable an attempt to create debian package for Recommends:ca-certificates. I: Using r-cran-knitr for Suggests:knitr I: Using r-cran-askpass for Imports:askpass I: Using r-cran-credentials for Imports:credentials (>= 1.2.1) I: Using r-cran-openssl for Imports:openssl (>= 2.0.3) I: Using r-cran-rstudioapi for Imports:rstudioapi (>= 0.11) I: Using r-cran-sys for Imports:sys I: Using r-cran-zip for Imports:zip (>= 2.1.0) I: Use r-cran-gert as Debian binary package for variables substitution dh_installdocs -O--buildsystem=R dh_installchangelogs -O--buildsystem=R dh_installsystemduser -O--buildsystem=R dh_perl -O--buildsystem=R dh_link -O--buildsystem=R dh_strip_nondeterminism -O--buildsystem=R dh_compress -O--buildsystem=R dh_fixperms -O--buildsystem=R dh_missing -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -O--buildsystem=R dh_gencontrol -O--buildsystem=R dh_md5sums -O--buildsystem=R dh_builddeb -O--buildsystem=R dpkg-deb: building package 'r-cran-gert-dbgsym' in '../r-cran-gert-dbgsym_2.0.1+dfsg-1_i386.deb'. dpkg-deb: building package 'r-cran-gert' in '../r-cran-gert_2.0.1+dfsg-1_i386.deb'. dpkg-genbuildinfo --build=binary -O../r-cran-gert_2.0.1+dfsg-1_i386.buildinfo dpkg-genchanges --build=binary -O../r-cran-gert_2.0.1+dfsg-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/73675/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/73675/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/73675 and its subdirectories I: Current time: Sat May 17 02:43:57 +14 2025 I: pbuilder-time-stamp: 1747399437