I: pbuilder: network access will be disabled during build I: Current time: Tue Apr 16 02:38:27 +14 2024 I: pbuilder-time-stamp: 1713184707 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [profnet_1.0.22-8.dsc] I: copying [./profnet_1.0.22.orig.tar.gz] I: copying [./profnet_1.0.22-8.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Jan 19 20:09:19 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./profnet_1.0.22-8.dsc: no acceptable signature found dpkg-source: info: extracting profnet in profnet-1.0.22 dpkg-source: info: unpacking profnet_1.0.22.orig.tar.gz dpkg-source: info: unpacking profnet_1.0.22-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying spelling dpkg-source: info: applying skip_some_flags_for_fortran.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/39987/tmp/hooks/D01_modify_environment starting debug: Running on ionos12-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Apr 15 12:38 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/39987/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/39987/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=e97bc0b973394033a39de962b0e81e6a LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=39987 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ZvWagEp4/pbuilderrc_D1QT --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ZvWagEp4/b2 --logfile b2/build.log profnet_1.0.22-8.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://78.137.99.97:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 10 11:24 /bin -> usr/bin I: user script /srv/workspace/pbuilder/39987/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), gfortran, rsync, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19874 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on rsync; however: Package rsync is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-13{a} gfortran-13-i686-linux-gnu{a} gfortran-i686-linux-gnu{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgfortran-13-dev{a} libgfortran5{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libpopt0{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} rsync{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 38 newly installed, 0 to remove and 0 not upgraded. Need to get 32.4 MB of archives. After unpacking 122 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpopt0 i386 1.19+dfsg-1+b1 [45.8 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 rsync i386 3.2.7-1+b1 [427 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-2+b1 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 libmagic1 i386 1:5.45-2+b1 [114 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-2+b1 [43.0 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-3 [1195 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.39.3-6 [93.3 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.0-3 [1413 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 25 http://deb.debian.org/debian trixie/main i386 libelf1 i386 0.190-1+b1 [182 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1 [118 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b2 [727 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14-20240201-3 [733 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 libgfortran-13-dev i386 13.2.0-13 [783 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 gfortran-13-i686-linux-gnu i386 13.2.0-13 [11.1 MB] Get: 36 http://deb.debian.org/debian trixie/main i386 gfortran-13 i386 13.2.0-13 [10.5 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 gfortran-i686-linux-gnu i386 4:13.2.0-7 [1280 B] Get: 38 http://deb.debian.org/debian trixie/main i386 gfortran i386 4:13.2.0-7 [1432 B] Fetched 32.4 MB in 1s (59.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpopt0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19874 files and directories currently installed.) Preparing to unpack .../00-libpopt0_1.19+dfsg-1+b1_i386.deb ... Unpacking libpopt0:i386 (1.19+dfsg-1+b1) ... Selecting previously unselected package rsync. Preparing to unpack .../01-rsync_3.2.7-1+b1_i386.deb ... Unpacking rsync (3.2.7-1+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../04-libmagic1_1%3a5.45-2+b1_i386.deb ... Unpacking libmagic1:i386 (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-2+b1_i386.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-14+b1_i386.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-3_i386.deb ... Unpacking groff-base (1.23.0-3) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.39.3-6_i386.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../10-libpipeline1_1.5.7-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.12.0-3_i386.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../17-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../18-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../19-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../20-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../21-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../22-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../23-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../24-libelf1_0.190-1+b1_i386.deb ... Unpacking libelf1:i386 (0.190-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../25-dwz_0.15-1_i386.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../26-libicu72_72.1-4+b1_i386.deb ... Unpacking libicu72:i386 (72.1-4+b1) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../27-libxml2_2.9.14+dfsg-1.3+b2_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Selecting previously unselected package gettext. Preparing to unpack .../28-gettext_0.21-14+b1_i386.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../29-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../30-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../31-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../32-libgfortran5_14-20240201-3_i386.deb ... Unpacking libgfortran5:i386 (14-20240201-3) ... Selecting previously unselected package libgfortran-13-dev:i386. Preparing to unpack .../33-libgfortran-13-dev_13.2.0-13_i386.deb ... Unpacking libgfortran-13-dev:i386 (13.2.0-13) ... Selecting previously unselected package gfortran-13-i686-linux-gnu. Preparing to unpack .../34-gfortran-13-i686-linux-gnu_13.2.0-13_i386.deb ... Unpacking gfortran-13-i686-linux-gnu (13.2.0-13) ... Selecting previously unselected package gfortran-13. Preparing to unpack .../35-gfortran-13_13.2.0-13_i386.deb ... Unpacking gfortran-13 (13.2.0-13) ... Selecting previously unselected package gfortran-i686-linux-gnu. Preparing to unpack .../36-gfortran-i686-linux-gnu_4%3a13.2.0-7_i386.deb ... Unpacking gfortran-i686-linux-gnu (4:13.2.0-7) ... Selecting previously unselected package gfortran. Preparing to unpack .../37-gfortran_4%3a13.2.0-7_i386.deb ... Unpacking gfortran (4:13.2.0-7) ... Setting up libpipeline1:i386 (1.5.7-2) ... Setting up libicu72:i386 (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1:i386 (1:5.45-2+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2+b1) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up libgfortran5:i386 (14-20240201-3) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:i386 (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libgfortran-13-dev:i386 (13.2.0-13) ... Setting up libelf1:i386 (0.190-1+b1) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3+b2) ... Setting up libpopt0:i386 (1.19+dfsg-1+b1) ... Setting up gfortran-13-i686-linux-gnu (13.2.0-13) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up gfortran-i686-linux-gnu (4:13.2.0-7) ... Setting up gfortran-13 (13.2.0-13) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.23.0-3) ... Setting up rsync (3.2.7-1+b1) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up gfortran (4:13.2.0-7) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.37-15) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/39987/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/39987/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/profnet-1.0.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../profnet_1.0.22-8_source.changes dpkg-buildpackage: info: source package profnet dpkg-buildpackage: info: source version 1.0.22-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_auto_clean make -j10 distclean make[1]: Entering directory '/build/reproducible-path/profnet-1.0.22' make -C src clean rm -rf bval_dir rm -rf chop_dir rm -rf con_dir rm -rf isis_dir rm -rf md_dir make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22/src' rm -f *.o profnet_prof rm -rf norsnet_dir rm -rf prof_dir rm -rf snapfun_dir make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22/src' make -C src-phd clean make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22/src-phd' rm -f *.o profphd_net make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22/src-phd' rm -f *.[0123456789].gz rm -rf\ profnet-1.0.22 \ profnet-1.0.22.tar.gz make[1]: Leaving directory '/build/reproducible-path/profnet-1.0.22' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/profnet-1.0.22' make patch make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p bval_dir && rsync -avC src/. ./bval_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370,298 bytes received 532 bytes 741,660.00 bytes/sec total size is 368,458 speedup is 0.99 patch -p 1 -E -d bval_dir < bval.patch && touch bval_dir/patch_stamp patching file Makefile patching file prof.f patching file profPar.f mkdir -p chop_dir && rsync -avC src/. ./chop_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370,298 bytes received 532 bytes 741,660.00 bytes/sec total size is 368,458 speedup is 0.99 patch -p 1 -E -d chop_dir < chop.patch && touch chop_dir/patch_stamp patching file Makefile Hunk #1 succeeded at 1 with fuzz 1. mkdir -p con_dir && rsync -avC src/. ./con_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370,298 bytes received 532 bytes 741,660.00 bytes/sec total size is 368,458 speedup is 0.99 patch -p 1 -E -d con_dir < con.patch && touch con_dir/patch_stamp patching file Makefile Hunk #1 succeeded at 1 with fuzz 1. patching file profPar.f mkdir -p isis_dir && rsync -avC src/. ./isis_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370,298 bytes received 532 bytes 741,660.00 bytes/sec total size is 368,458 speedup is 0.99 patch -p 1 -E -d isis_dir < isis.patch && touch isis_dir/patch_stamp patching file Makefile Hunk #1 succeeded at 1 with fuzz 1. patching file profPar.f mkdir -p md_dir && rsync -avC src/. ./md_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370,298 bytes received 532 bytes 741,660.00 bytes/sec total size is 368,458 speedup is 0.99 patch -p 1 -E -d md_dir < md.patch && touch md_dir/patch_stamp patching file Makefile patching file prof.f patching file profPar.f mkdir -p norsnet_dir && rsync -avC src/. ./norsnet_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370,298 bytes received 532 bytes 741,660.00 bytes/sec total size is 368,458 speedup is 0.99 patch -p 1 -E -d norsnet_dir < norsnet.patch && touch norsnet_dir/patch_stamp patching file Makefile patching file prof.f patching file profPar.f mkdir -p prof_dir && rsync -avC src/. ./prof_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370,298 bytes received 532 bytes 741,660.00 bytes/sec total size is 368,458 speedup is 0.99 patch -p 1 -E -d prof_dir < prof.patch && touch prof_dir/patch_stamp mkdir -p snapfun_dir && rsync -avC src/. ./snapfun_dir/. sending incremental file list ./ Doc-lib-nn Doc-nn.txt Makefile PROFin.dat RUN-special ReadMe-mac compile_macintel.csh lib-LINUX.f lib-prof.f lib-sys-ALPHA.f lib-sys-LINUX.f lib-sys-MAC.f lib-sys-MACIBM.f lib-sys-MACINTEL.f lib-sys-SGI64.f make.ALPHA make.LINUX make.LINUX-pgi make.MAC make.MACIBM make.MACINTEL make.SGI32 make.SGI64 make.SGI64_no64 prof.f profPar.f tmp.f sent 370,298 bytes received 532 bytes 741,660.00 bytes/sec total size is 368,458 speedup is 0.99 patch -p 1 -E -d snapfun_dir < snapfun.patch && touch snapfun_dir/patch_stamp patching file Makefile patching file Makefile.orig patching file profPar.f make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' make CFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security" LDFLAGS="-Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' make -C bval_dir make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/bval_dir' --- making profnet_bval gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_bval prof.f lib-prof.f lib-sys-LINUX.f f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran prof.f:527:28: 527 | ERRBINSTOP= 0.95 | 1 Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion] prof.f:1853:24: 1853 | CALL RDPAR_ERR('NUMIN',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) prof.f:1856:24: 1856 | CALL RDPAR_ERR('NUMHID',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1859:24: 1859 | CALL RDPAR_ERR('NUMOUT',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1864:24: 1864 | CALL RDPAR_ERR('NUMSAM',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1870:24: 1870 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1873:24: 1873 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1876:24: 1876 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1879:24: 1879 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1885:24: 1885 | CALL RDPAR_ERR('STPSWPMAX',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) prof.f:1888:24: 1888 | CALL RDPAR_ERR('STPMAX',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1891:24: 1891 | CALL RDPAR_ERR('STPINF',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1334:45: 1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) | 1 Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument] f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/bval_dir' make -C chop_dir make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/chop_dir' --- making profnet_chop gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_chop prof.f lib-prof.f lib-sys-LINUX.f f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran prof.f:527:28: 527 | ERRBINSTOP= 0.95 | 1 Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion] prof.f:1853:24: 1853 | CALL RDPAR_ERR('NUMIN ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856:24: 1856 | CALL RDPAR_ERR('NUMHID ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859:24: 1859 | CALL RDPAR_ERR('NUMOUT ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864:24: 1864 | CALL RDPAR_ERR('NUMSAM ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870:24: 1870 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873:24: 1873 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876:24: 1876 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879:24: 1879 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885:24: 1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888:24: 1888 | CALL RDPAR_ERR('STPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891:24: 1891 | CALL RDPAR_ERR('STPINF ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334:45: 1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) | 1 Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument] f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/chop_dir' make -C con_dir make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/con_dir' --- making profnet_con gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_con prof.f lib-prof.f lib-sys-LINUX.f f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran prof.f:527:28: 527 | ERRBINSTOP= 0.95 | 1 Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion] prof.f:1853:24: 1853 | CALL RDPAR_ERR('NUMIN ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856:24: 1856 | CALL RDPAR_ERR('NUMHID ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859:24: 1859 | CALL RDPAR_ERR('NUMOUT ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864:24: 1864 | CALL RDPAR_ERR('NUMSAM ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870:24: 1870 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873:24: 1873 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876:24: 1876 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879:24: 1879 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885:24: 1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888:24: 1888 | CALL RDPAR_ERR('STPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891:24: 1891 | CALL RDPAR_ERR('STPINF ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334:45: 1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) | 1 Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument] f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/con_dir' make -C isis_dir make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/isis_dir' --- making profnet_isis gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_isis prof.f lib-prof.f lib-sys-LINUX.f f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran prof.f:527:28: 527 | ERRBINSTOP= 0.95 | 1 Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion] prof.f:1853:24: 1853 | CALL RDPAR_ERR('NUMIN ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856:24: 1856 | CALL RDPAR_ERR('NUMHID ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859:24: 1859 | CALL RDPAR_ERR('NUMOUT ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864:24: 1864 | CALL RDPAR_ERR('NUMSAM ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870:24: 1870 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873:24: 1873 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876:24: 1876 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879:24: 1879 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885:24: 1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888:24: 1888 | CALL RDPAR_ERR('STPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891:24: 1891 | CALL RDPAR_ERR('STPINF ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334:45: 1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) | 1 Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument] f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/isis_dir' make -C md_dir make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/md_dir' --- making profnet_md gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_md prof.f lib-prof.f lib-sys-LINUX.f f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran prof.f:527:28: 527 | ERRBINSTOP= 0.95 | 1 Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion] prof.f:1853:24: 1853 | CALL RDPAR_ERR('NUMIN',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) prof.f:1856:24: 1856 | CALL RDPAR_ERR('NUMHID',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1859:24: 1859 | CALL RDPAR_ERR('NUMOUT',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1864:24: 1864 | CALL RDPAR_ERR('NUMSAM',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1870:24: 1870 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1873:24: 1873 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1876:24: 1876 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1879:24: 1879 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1885:24: 1885 | CALL RDPAR_ERR('STPSWPMAX',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) prof.f:1888:24: 1888 | CALL RDPAR_ERR('STPMAX',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1891:24: 1891 | CALL RDPAR_ERR('STPINF',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1334:45: 1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) | 1 Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument] f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/md_dir' make -C norsnet_dir make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/norsnet_dir' --- making profnet_norsnet gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_norsnet prof.f lib-prof.f lib-sys-LINUX.f f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran prof.f:527:28: 527 | ERRBINSTOP= 0.95 | 1 Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion] prof.f:1853:24: 1853 | CALL RDPAR_ERR('NUMIN',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (5/456) at (1) prof.f:1856:24: 1856 | CALL RDPAR_ERR('NUMHID',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1859:24: 1859 | CALL RDPAR_ERR('NUMOUT',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1864:24: 1864 | CALL RDPAR_ERR('NUMSAM',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1870:24: 1870 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1873:24: 1873 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1876:24: 1876 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1879:24: 1879 | CALL RDPAR_ERR(HC,VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (80/456) at (1) prof.f:1885:24: 1885 | CALL RDPAR_ERR('STPSWPMAX',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (9/456) at (1) prof.f:1888:24: 1888 | CALL RDPAR_ERR('STPMAX',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1891:24: 1891 | CALL RDPAR_ERR('STPINF',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1334:45: 1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) | 1 Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument] f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/norsnet_dir' make -C prof_dir make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/prof_dir' --- making profnet_prof gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_prof prof.f lib-prof.f lib-sys-LINUX.f f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran prof.f:527:28: 527 | ERRBINSTOP= 0.95 | 1 Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion] prof.f:1853:24: 1853 | CALL RDPAR_ERR('NUMIN ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856:24: 1856 | CALL RDPAR_ERR('NUMHID ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859:24: 1859 | CALL RDPAR_ERR('NUMOUT ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864:24: 1864 | CALL RDPAR_ERR('NUMSAM ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870:24: 1870 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873:24: 1873 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876:24: 1876 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879:24: 1879 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885:24: 1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888:24: 1888 | CALL RDPAR_ERR('STPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891:24: 1891 | CALL RDPAR_ERR('STPINF ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334:45: 1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) | 1 Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument] f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/prof_dir' make -C snapfun_dir make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/snapfun_dir' --- making profnet_snapfun gfortran -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security -fallow-argument-mismatch -fallow-argument-mismatch -O2 -Wuninitialized -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -o profnet_snapfun prof.f lib-prof.f lib-sys-LINUX.f f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran prof.f:527:28: 527 | ERRBINSTOP= 0.95 | 1 Warning: Change of value in conversion from 'REAL(4)' to 'INTEGER(4)' at (1) [-Wconversion] prof.f:1853:24: 1853 | CALL RDPAR_ERR('NUMIN ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (6/456) at (1) prof.f:1856:24: 1856 | CALL RDPAR_ERR('NUMHID ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1859:24: 1859 | CALL RDPAR_ERR('NUMOUT ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1864:24: 1864 | CALL RDPAR_ERR('NUMSAM ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1870:24: 1870 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1873:24: 1873 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1876:24: 1876 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1879:24: 1879 | CALL RDPAR_ERR(HC // ' ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (81/456) at (1) prof.f:1885:24: 1885 | CALL RDPAR_ERR('STPSWPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (10/456) at (1) prof.f:1888:24: 1888 | CALL RDPAR_ERR('STPMAX ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1891:24: 1891 | CALL RDPAR_ERR('STPINF ',VARIN) | 1 Warning: Character length of actual argument shorter than of dummy argument 'char_rd' (7/456) at (1) prof.f:1334:45: 1334 | SUBROUTINE RDIN_HEAD(NUMINLOC,NUMSAMLOC) | 1 Warning: Unused dummy argument 'numsamloc' at (1) [-Wunused-dummy-argument] f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran f951: Warning: command-line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran f951: Warning: '-Werror=' argument '-Werror=format-security' is not valid for Fortran make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/snapfun_dir' pod2man -c 'User Commands' -r "1.0.22-" profnet.pod | gzip -c > profnet.1.gz profnet.pod around line 27: Expected text after =item, not a number profnet.pod around line 31: Expected text after =item, not a number profnet.pod around line 35: Expected text after =item, not a number profnet.pod around line 39: Expected text after =item, not a number profnet.pod around line 43: Expected text after =item, not a number profnet.pod around line 47: Expected text after =item, not a number profnet.pod around line 51: Expected text after =item, not a number profnet.pod around line 55: Expected text after =item, not a number profnet.pod around line 59: Expected text after =item, not a number profnet.pod around line 63: Expected text after =item, not a number POD document had syntax errors at /usr/bin/pod2man line 69. make -C src-phd make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/src-phd' gfortran `echo -g -O2 -ffile-prefix-map=/build/reproducible-path/profnet-1.0.22=. -fstack-protector-strong -Wformat -Werror=format-security | sed 's/-Wformat -Werror=format-security/-fallow-argument-mismatch/'` -O3 -fbounds-check -Wall -Wl,-z,relro -Wl,-z,now -o profphd_net phd.f lib-phd.f phd.f:8107:5: 8107 | 19991 CONTINUE | 1 Warning: Label 19991 at (1) defined but not used [-Wunused-label] phd.f:7860:72: 7860 | INTERPROTNAME(1:7)=PROTNAME(1) | 1 Warning: CHARACTER expression will be truncated in assignment (7/132) at (1) [-Wcharacter-truncation] phd.f:7785:72: 7785 | INTERPROTNAME(1:7)=PROTNAME(1) | 1 Warning: CHARACTER expression will be truncated in assignment (7/132) at (1) [-Wcharacter-truncation] phd.f:4475:72: 4475 | TEMPSTRING(1:)=CSTRING(1:) | 1 Warning: CHARACTER expression will be truncated in assignment (200/222) at (1) [-Wcharacter-truncation] phd.f:4479:72: 4479 | TEMPSTRING(1:)=CSTRING(1:) | 1 Warning: CHARACTER expression will be truncated in assignment (200/222) at (1) [-Wcharacter-truncation] phd.f:2139:52: 357 | CALL SRMAX1(OUTLOC,NUMOUTMAX,RMAX,IMAX) | 2 ...... 2139 | CALL SRMAX1(INTERMAX,NUMOUTMAX,INTERMAXVAL,INTERMAXPOS) | 1 Warning: Type mismatch between actual argument at (1) and actual argument at (2) (INTEGER(2)/INTEGER(4)). phd.f:1437:40: 1437 | CHARACTER*1 FC_REXP_TO_3STCHAR,FC_REXPI_TO_3STCHAR | 1 Warning: Unused variable 'fc_rexp_to_3stchar' declared at (1) [-Wunused-variable] phd.f:3687:60: 3687 | + IPROTNAME(MAXALIGNS),ACCNUM(MAXALIGNS), | 1 Warning: Array 'accnum' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3672:37: 3672 | CHARACTER*7 COLS(NUMRESMAX) | 1 Warning: Array 'cols' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3597:40: 3597 | CHARACTER*132 CPROTID(MAXALIGNS) | 1 Warning: Array 'cprotid' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3686:39: 3686 | CHARACTER*132 EMBLID(MAXALIGNS),STRID(MAXALIGNS), | 1 Warning: Array 'emblid' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3688:44: 3688 | + EXCLUDEFLAG(MAXALIGNS) | 1 Warning: Array 'excludeflag' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3687:42: 3687 | + IPROTNAME(MAXALIGNS),ACCNUM(MAXALIGNS), | 1 Warning: Array 'iprotname' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3587:46: 3587 | INTEGER PROFILE(NUMRESMAX,MAXAA) | 1 Warning: Array 'profile' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3700:46: 3700 | INTEGER SEQPROF(NUMRESMAX,MAXAA), | 1 Warning: Array 'seqprof' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3686:56: 3686 | CHARACTER*132 EMBLID(MAXALIGNS),STRID(MAXALIGNS), | 1 Warning: Array 'strid' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider increasing the '-fmax-stack-var-size=' limit (or use '-frecursive', which implies unlimited '-fmax-stack-var-size') - or change the code to use an ALLOCATABLE array. If the variable is never accessed concurrently, this warning can be ignored, and the variable could also be declared with the SAVE attribute. [-Wsurprising] phd.f:3923:30: 3923 | + ACC,NOCC,VAR,ALISEQ,ALIPOINTER, | 1 Warning: Unused dummy argument 'aliseq' at (1) [-Wunused-dummy-argument] phd.f:3922:58: 3922 | + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2, | 1 Warning: Unused dummy argument 'bp1' at (1) [-Wunused-dummy-argument] phd.f:3922:62: 3922 | + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2, | 1 Warning: Unused dummy argument 'bp2' at (1) [-Wunused-dummy-argument] phd.f:3924:36: 3924 | + SEQPROF,NDEL,NINS,ENTROPY,RELENT,CONSWEIGHT, | 1 Warning: Unused dummy argument 'entropy' at (1) [-Wunused-dummy-argument] phd.f:3916:31: 3916 | + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC, | 1 Warning: Unused dummy argument 'maxaligns_loc' at (1) [-Wunused-dummy-argument] phd.f:3916:43: 3916 | + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC, | 1 Warning: Unused dummy argument 'maxcore_loc' at (1) [-Wunused-dummy-argument] phd.f:3916:17: 3916 | + MAXRES,MAXALIGNS_LOC,MAXCORE_LOC, | 1 Warning: Unused dummy argument 'maxres' at (1) [-Wunused-dummy-argument] phd.f:3924:43: 3924 | + SEQPROF,NDEL,NINS,ENTROPY,RELENT,CONSWEIGHT, | 1 Warning: Unused dummy argument 'relent' at (1) [-Wunused-dummy-argument] phd.f:3922:54: 3922 | + PDBNO,PDBSEQ,CHAINID,SECSTR,COLS,SHEETLABEL,BP1,BP2, | 1 Warning: Unused dummy argument 'sheetlabel' at (1) [-Wunused-dummy-argument] phd.f:3923:23: 3923 | + ACC,NOCC,VAR,ALISEQ,ALIPOINTER, | 1 Warning: Unused dummy argument 'var' at (1) [-Wunused-dummy-argument] phd.f:64:41: 64 | REAL TIME0,FRTIME_SECNDS | 1 Warning: Unused variable 'frtime_secnds' declared at (1) [-Wunused-variable] make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/src-phd' make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' make[1]: Leaving directory '/build/reproducible-path/profnet-1.0.22' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profnet-bval prefix=/usr install-bval make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-bval/usr/bin && \ cp -a bval_dir/profnet_bval \ /build/reproducible-path/profnet-1.0.22/debian/profnet-bval/usr/bin/ mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-bval/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profnet-bval/usr/share/man/man1/profnet_bval.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profnet-chop prefix=/usr install-chop make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-chop/usr/bin && \ cp -a chop_dir/profnet_chop \ /build/reproducible-path/profnet-1.0.22/debian/profnet-chop/usr/bin/ mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-chop/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profnet-chop/usr/share/man/man1/profnet_chop.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profnet-con prefix=/usr install-con make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-con/usr/bin && \ cp -a con_dir/profnet_con \ /build/reproducible-path/profnet-1.0.22/debian/profnet-con/usr/bin/ mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-con/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profnet-con/usr/share/man/man1/profnet_con.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profnet-isis prefix=/usr install-isis make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-isis/usr/bin && \ cp -a isis_dir/profnet_isis \ /build/reproducible-path/profnet-1.0.22/debian/profnet-isis/usr/bin/ mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-isis/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profnet-isis/usr/share/man/man1/profnet_isis.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profnet-md prefix=/usr install-md make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-md/usr/bin && \ cp -a md_dir/profnet_md \ /build/reproducible-path/profnet-1.0.22/debian/profnet-md/usr/bin/ mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-md/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profnet-md/usr/share/man/man1/profnet_md.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profnet-norsnet prefix=/usr install-norsnet make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-norsnet/usr/bin && \ cp -a norsnet_dir/profnet_norsnet \ /build/reproducible-path/profnet-1.0.22/debian/profnet-norsnet/usr/bin/ mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-norsnet/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profnet-norsnet/usr/share/man/man1/profnet_norsnet.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profnet-prof prefix=/usr install-prof make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-prof/usr/bin && \ cp -a prof_dir/profnet_prof \ /build/reproducible-path/profnet-1.0.22/debian/profnet-prof/usr/bin/ mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-prof/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profnet-prof/usr/share/man/man1/profnet_prof.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profnet-snapfun prefix=/usr install-snapfun make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-snapfun/usr/bin && \ cp -a snapfun_dir/profnet_snapfun \ /build/reproducible-path/profnet-1.0.22/debian/profnet-snapfun/usr/bin/ mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profnet-snapfun/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profnet-snapfun/usr/share/man/man1/profnet_snapfun.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make DESTDIR=/build/reproducible-path/profnet-1.0.22/debian/profphd-net prefix=/usr install-phd make[2]: Entering directory '/build/reproducible-path/profnet-1.0.22' /usr/bin/make -C src-phd install make[3]: Entering directory '/build/reproducible-path/profnet-1.0.22/src-phd' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profphd-net/usr/bin && \ cp profphd_net /build/reproducible-path/profnet-1.0.22/debian/profphd-net/usr/bin/ rm -f /build/reproducible-path/profnet-1.0.22/debian/profphd-net/usr/bin/phd1994 && ln -s profphd_net /build/reproducible-path/profnet-1.0.22/debian/profphd-net/usr/bin/phd1994 make[3]: Leaving directory '/build/reproducible-path/profnet-1.0.22/src-phd' mkdir -p /build/reproducible-path/profnet-1.0.22/debian/profphd-net/usr/share/man/man1 && cp profnet.1.gz /build/reproducible-path/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/profphd_net.1.gz rm -f /build/reproducible-path/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/phd1994.1.gz && ln -s profphd_net.1.gz /build/reproducible-path/profnet-1.0.22/debian/profphd-net/usr/share/man/man1/phd1994.1.gz make[2]: Leaving directory '/build/reproducible-path/profnet-1.0.22' make[1]: Leaving directory '/build/reproducible-path/profnet-1.0.22' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a debian/rules override_dh_shlibdeps make[1]: Entering directory '/build/reproducible-path/profnet-1.0.22' dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profphd-net/usr/bin/profphd_net was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profnet-norsnet/usr/bin/profnet_norsnet was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profnet-chop/usr/bin/profnet_chop was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profnet-con/usr/bin/profnet_con was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profnet-isis/usr/bin/profnet_isis was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profnet-prof/usr/bin/profnet_prof was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profnet-snapfun/usr/bin/profnet_snapfun was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profnet-bval/usr/bin/profnet_bval was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/profnet-md/usr/bin/profnet_md was not linked against libgcc_s.so.1 (it uses none of the library's symbols) # sneak in common part of package descriptions for i in $(sed -n '/^Package: / s///p' debian/control); do \ cat debian/Description >> debian/$i.substvars; \ done; make[1]: Leaving directory '/build/reproducible-path/profnet-1.0.22' dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package profnet-isis: substitution variable ${Description} unused, but is defined dpkg-gencontrol: warning: package profphd-net: substitution variable ${Description} unused, but is defined dpkg-gencontrol: warning: package profnet-norsnet: substitution variable ${Description} unused, but is defined dpkg-gencontrol: warning: package profnet-con: substitution variable ${Description} unused, but is defined dpkg-gencontrol: warning: package profnet-chop: substitution variable ${Description} unused, but is defined dpkg-gencontrol: warning: package profnet-bval: substitution variable ${Description} unused, but is defined dpkg-gencontrol: warning: package profnet-snapfun: substitution variable ${Description} unused, but is defined dpkg-gencontrol: warning: package profnet-prof: substitution variable ${Description} unused, but is defined dpkg-gencontrol: warning: package profnet-md: substitution variable ${Description} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'profnet-bval' in '../profnet-bval_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-chop' in '../profnet-chop_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-con' in '../profnet-con_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-isis' in '../profnet-isis_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-md' in '../profnet-md_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-norsnet' in '../profnet-norsnet_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-prof' in '../profnet-prof_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-snapfun' in '../profnet-snapfun_1.0.22-8_i386.deb'. dpkg-deb: building package 'profphd-net' in '../profphd-net_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-bval-dbgsym' in '../profnet-bval-dbgsym_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-norsnet-dbgsym' in '../profnet-norsnet-dbgsym_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-md-dbgsym' in '../profnet-md-dbgsym_1.0.22-8_i386.deb'. dpkg-deb: building package 'profphd-net-dbgsym' in '../profphd-net-dbgsym_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-chop-dbgsym' in '../profnet-chop-dbgsym_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-snapfun-dbgsym' in '../profnet-snapfun-dbgsym_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-con-dbgsym' in '../profnet-con-dbgsym_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-prof-dbgsym' in '../profnet-prof-dbgsym_1.0.22-8_i386.deb'. dpkg-deb: building package 'profnet-isis-dbgsym' in '../profnet-isis-dbgsym_1.0.22-8_i386.deb'. dpkg-genbuildinfo --build=binary -O../profnet_1.0.22-8_i386.buildinfo dpkg-genchanges --build=binary -O../profnet_1.0.22-8_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/39987/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/39987/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/39987 and its subdirectories I: Current time: Tue Apr 16 02:40:09 +14 2024 I: pbuilder-time-stamp: 1713184809