I: pbuilder: network access will be disabled during build I: Current time: Tue Oct 21 03:11:07 +14 2025 I: pbuilder-time-stamp: 1760965867 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [fenicsx-performance-tests_0.8.0-1.dsc] I: copying [./fenicsx-performance-tests_0.8.0.orig.tar.gz] I: copying [./fenicsx-performance-tests_0.8.0-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sat May 4 12:08:06 2024 gpgv: using RSA key 1B5D04B1E507BBF03669E2B801F35FC33E73AF8C gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./fenicsx-performance-tests_0.8.0-1.dsc: no acceptable signature found dpkg-source: info: extracting fenicsx-performance-tests in fenicsx-performance-tests-0.8.0 dpkg-source: info: unpacking fenicsx-performance-tests_0.8.0.orig.tar.gz dpkg-source: info: unpacking fenicsx-performance-tests_0.8.0-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying enable_complex_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/5841/tmp/hooks/D01_modify_environment starting debug: Running on infom08-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Oct 20 13:11 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/5841/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/5841/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=5 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=6c730c82f03b4b199c7af3e6dd700c0e LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=5841 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.gwt5979S/pbuilderrc_ySbU --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.gwt5979S/b2 --logfile b2/build.log fenicsx-performance-tests_0.8.0-1.dsc' SUDO_GID=111 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' I: uname -a Linux i-capture-the-hostname 6.10.6+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.6-1~bpo12+1 (2024-08-26) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/5841/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake (>= 3.16~), libboost-dev (>= 1.70~), libdolfinx-dev (>= 1:0.8~), libdolfinx-real-dev, mpi-default-dev, python3-ffcx dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19770 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake (>= 3.16~); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev (>= 1.70~); however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-dev (>= 1:0.8~); however: Package libdolfinx-dev is not installed. pbuilder-satisfydepends-dummy depends on libdolfinx-real-dev; however: Package libdolfinx-real-dev is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-ffcx; however: Package python3-ffcx is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fonts-mathjax{a} gettext{a} gettext-base{a} gfortran{a} gfortran-14{a} gfortran-14-i686-linux-gnu{a} gfortran-i686-linux-gnu{a} groff-base{a} hwloc-nox{a} icu-devtools{a} intltool-debian{a} libaec-dev{a} libaec0{a} libamd3{a} libarchive-zip-perl{a} libarchive13t64{a} libarpack2-dev{a} libarpack2t64{a} libbasix-dev{a} libbasix0.8{a} libblas-dev{a} libblas3{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-chrono-dev{a} libboost-chrono1.83-dev{a} libboost-chrono1.83.0t64{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-math-dev{a} libboost-math1.83-dev{a} libboost-math1.83.0{a} libboost-mpi-dev{a} libboost-mpi1.83-dev{a} libboost-mpi1.83.0{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization-dev{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost-thread-dev{a} libboost-thread1.83-dev{a} libboost-thread1.83.0{a} libboost-timer-dev{a} libboost-timer1.83-dev{a} libboost-timer1.83.0{a} libboost1.83-dev{a} libbrotli-dev{a} libbrotli1{a} libbtf2{a} libc6-dbg{a} libcamd3{a} libccolamd3{a} libcholmod5{a} libcolamd3{a} libcom-err2{a} libcombblas2.0.0t64{a} libcurl4-openssl-dev{a} libcurl4t64{a} libcxsparse4{a} libdebhelper-perl{a} libdolfinx-dev{a} libdolfinx-real-dev{a} libdolfinx-real0.8{a} libeigen3-dev{a} libelf1t64{a} libevent-2.1-7t64{a} libevent-core-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libexpat1-dev{a} libfabric1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-mpi-dev{a} libfftw3-mpi3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libgfortran-14-dev{a} libgfortran5{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgssapi-krb5-2{a} libhdf5-mpi-dev{a} libhdf5-mpich-103-1t64{a} libhdf5-mpich-cpp-103-1t64{a} libhdf5-mpich-dev{a} libhdf5-mpich-fortran-102t64{a} libhdf5-mpich-hl-100t64{a} libhdf5-mpich-hl-cpp-100t64{a} libhdf5-mpich-hl-fortran-100t64{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc15{a} libhypre-2.29.0{a} libhypre-dev{a} libibverbs1{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-mathjax{a} libjs-sphinxdoc{a} libjs-underscore{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libklu2{a} libkrb5-3{a} libkrb5support0{a} liblapack-dev{a} liblapack3{a} libldap-2.5-0{a} libldl3{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1t64{a} libmetis5{a} libmpich-dev{a} libmpich12{a} libmumps-5.6t64{a} libmumps-dev{a} libmumps-headers-dev{a} libnghttp2-14{a} libnghttp2-dev{a} libnl-3-200{a} libnl-route-3-200{a} libnsl2{a} libnuma-dev{a} libnuma1{a} libopenmpi3t64{a} libp11-kit-dev{a} libparpack2-dev{a} libparpack2t64{a} libparu0{a} libpciaccess0{a} libpetsc-real3.20{a} libpetsc-real3.20-dev{a} libpetsc3.20-dev-common{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libpsm-infinipath1{a} libptscotch-7.0{a} libptscotch-dev{a} libpugixml-dev{a} libpugixml1v5{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} librbio4{a} librdmacm1t64{a} libreadline8t64{a} librhash0{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libscalapack-mpi-dev{a} libscalapack-mpich-dev{a} libscalapack-mpich2.2{a} libscotch-7.0{a} libscotch-dev{a} libslepc-real3.20{a} libslepc-real3.20-dev{a} libslurm41t64{a} libspex3{a} libspqr4{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsuitesparse-dev{a} libsuitesparse-mongoose3{a} libsuitesparseconfig7{a} libsuperlu-dev{a} libsuperlu-dist-dev{a} libsuperlu-dist8{a} libsuperlu6{a} libsz2{a} libtasn1-6-dev{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libumfpack6{a} libunbound8{a} libuv1t64{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext6{a} libxml2{a} libxml2-dev{a} libxnvctrl0{a} libyaml-0-2{a} libyaml-dev{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} mpi-default-dev{a} mpich{a} netbase{a} nettle-dev{a} ocl-icd-libopencl1{a} ocl-icd-opencl-dev{a} opencl-c-headers{a} opencl-clhpp-headers{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python3{a} python3-autocommand{a} python3-basix{a} python3-cffi{a} python3-cffi-backend{a} python3-dev{a} python3-ffcx{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-pkg-resources{a} python3-ply{a} python3-pycparser{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-ufl{a} python3-zipp{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} valgrind{a} valgrind-mpi{a} x11proto-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl gdb ibverbs-providers javascript-common krb5-locales ksh ksh93u+m libarchive-cpio-perl libgl-dev libgraphblas-dev libldap-common libmail-sendmail-perl libpetsc3.20-dev-examples libsasl2-modules libtasn1-doc linux-sysctl-defaults lynx mksh psmisc publicsuffix wget zsh 0 packages upgraded, 291 newly installed, 0 to remove and 0 not upgraded. Need to get 213 MB of archives. After unpacking 988 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.6-1 [813 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.3-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.6-1 [2242 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.12.5-1+b1 [26.9 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.21.3-3 [34.9 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1-1 [23.1 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.21.3-3 [83.6 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 12 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.21.3-3 [350 kB] Get: 13 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.21.3-3 [146 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 libtirpc3t64 i386 1.3.4+ds-1.3 [90.2 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 libnsl2 i386 1.3.0-3+b2 [42.4 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-5 [173 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.6-1 [1961 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.6-1 [669 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.12.5-1+b1 [9884 B] Get: 22 http://deb.debian.org/debian trixie/main i386 python3 i386 3.12.5-1+b1 [27.9 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-5 [65.6 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-5 [875 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3 [42.9 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.22.5-2 [201 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-5 [1196 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40.2-8 [102 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.8-1 [41.2 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 man-db i386 2.13.0-1 [1428 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 autoconf all 2.72-3 [493 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 autopoint all 0.22.5-2 [723 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-5 [9550 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b3 [727 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 libarchive13t64 i386 3.7.4-1 [390 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b4 [309 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-8 [20.6 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-8 [61.0 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.18+dfsg-3 [200 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.63.0-1 [82.7 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.0-7 [226 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libcurl4t64 i386 8.9.1-2 [502 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libjsoncpp25 i386 1.9.5-6+b2 [89.2 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 librhash0 i386 1.4.3-3+b1 [143 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 libuv1t64 i386 1.48.0-6 [157 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 cmake-data all 3.30.3-1 [2221 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 cmake i386 3.30.3-1 [12.5 MB] Get: 57 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.20 [89.7 kB] Get: 58 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 63 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.191-2 [194 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 gettext i386 0.22.5-2 [1631 kB] Get: 66 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 debhelper all 13.20 [915 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14.2.0-3 [735 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 libgfortran-14-dev i386 14.2.0-3 [800 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 gfortran-14-i686-linux-gnu i386 14.2.0-3 [12.5 MB] Get: 73 http://deb.debian.org/debian trixie/main i386 gfortran-14 i386 14.2.0-3 [11.8 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 gfortran-i686-linux-gnu i386 4:14.1.0-2 [1284 B] Get: 75 http://deb.debian.org/debian trixie/main i386 gfortran i386 4:14.1.0-2 [1432 B] Get: 76 http://deb.debian.org/debian trixie/main i386 libhwloc15 i386 2.11.0-2 [175 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 hwloc-nox i386 2.11.0-2 [227 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 icu-devtools i386 72.1-5 [216 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 libaec0 i386 1.1.3-1 [24.5 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 libsz2 i386 1.1.3-1 [7824 B] Get: 81 http://deb.debian.org/debian trixie/main i386 libaec-dev i386 1.1.3-1 [22.4 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 libsuitesparseconfig7 i386 1:7.8.2+dfsg-1 [23.5 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 libamd3 i386 1:7.8.2+dfsg-1 [42.9 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-3 [140 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-3 [2167 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 libarpack2t64 i386 3.9.1-1.1+b1 [101 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 libblas-dev i386 3.12.0-3 [152 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 liblapack-dev i386 3.12.0-3 [4400 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 libarpack2-dev i386 3.9.1-1.1+b1 [120 kB] Get: 90 http://deb.debian.org/debian trixie/main i386 libbasix0.8 i386 0.8.0-8 [432 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 libpkgconf3 i386 1.8.1-3 [38.2 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 pkgconf-bin i386 1.8.1-3 [30.3 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 pkgconf i386 1.8.1-3 [26.1 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 libeigen3-dev all 3.4.0-4 [1041 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 libbasix-dev i386 0.8.0-8 [62.5 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 libboost1.83-dev i386 1.83.0-3.2 [10.6 MB] Get: 97 http://deb.debian.org/debian trixie/main i386 libboost-atomic1.83.0 i386 1.83.0-3.2 [234 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 libboost-atomic1.83-dev i386 1.83.0-3.2 [235 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 libboost-chrono1.83.0t64 i386 1.83.0-3.2 [241 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 libboost-chrono1.83-dev i386 1.83.0-3.2 [247 kB] Get: 101 http://deb.debian.org/debian trixie/main i386 libboost-chrono-dev i386 1.83.0.2+b2 [4228 B] Get: 102 http://deb.debian.org/debian trixie/main i386 libboost-date-time1.83.0 i386 1.83.0-3.2 [230 kB] Get: 103 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83.0 i386 1.83.0-3.2 [343 kB] Get: 104 http://deb.debian.org/debian trixie/main i386 libboost-serialization1.83-dev i386 1.83.0-3.2 [386 kB] Get: 105 http://deb.debian.org/debian trixie/main i386 libboost-date-time1.83-dev i386 1.83.0-3.2 [239 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 libboost-dev i386 1.83.0.2+b2 [3840 B] Get: 107 http://deb.debian.org/debian trixie/main i386 libboost-filesystem1.83.0 i386 1.83.0-3.2 [287 kB] Get: 108 http://deb.debian.org/debian trixie/main i386 libboost-system1.83.0 i386 1.83.0-3.2 [230 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 libboost-system1.83-dev i386 1.83.0-3.2 [231 kB] Get: 110 http://deb.debian.org/debian trixie/main i386 libboost-filesystem1.83-dev i386 1.83.0-3.2 [305 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 libboost-filesystem-dev i386 1.83.0.2+b2 [3640 B] Get: 112 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83.0 i386 1.83.0-3.2 [329 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 libicu-dev i386 72.1-5 [10.6 MB] Get: 114 http://deb.debian.org/debian trixie/main i386 libboost-regex1.83-dev i386 1.83.0-3.2 [347 kB] Get: 115 http://deb.debian.org/debian trixie/main i386 libboost-iostreams1.83-dev i386 1.83.0-3.2 [264 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 libboost-iostreams-dev i386 1.83.0.2+b2 [3588 B] Get: 117 http://deb.debian.org/debian trixie/main i386 libboost-math1.83.0 i386 1.83.0-3.2 [433 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 libboost-math1.83-dev i386 1.83.0-3.2 [511 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 libboost-math-dev i386 1.83.0.2+b2 [3800 B] Get: 120 http://deb.debian.org/debian trixie/main i386 libmpich12 i386 4.2.0-14 [1518 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 libboost-mpi1.83.0 i386 1.83.0-3.2 [274 kB] Get: 122 http://deb.debian.org/debian trixie/main i386 libnuma1 i386 2.0.18-1 [23.5 kB] Get: 123 http://deb.debian.org/debian trixie/main i386 libnuma-dev i386 2.0.18-1 [38.3 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 libltdl7 i386 2.4.7-7+b1 [395 kB] Get: 125 http://deb.debian.org/debian trixie/main i386 libltdl-dev i386 2.4.7-7+b1 [167 kB] Get: 126 http://deb.debian.org/debian trixie/main i386 libhwloc-dev i386 2.11.0-2 [270 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 libslurm41t64 i386 24.05.2-1 [738 kB] Get: 128 http://deb.debian.org/debian trixie/main i386 mpich i386 4.2.0-14 [235 kB] Get: 129 http://deb.debian.org/debian trixie/main i386 libmpich-dev i386 4.2.0-14 [2494 kB] Get: 130 http://deb.debian.org/debian trixie/main i386 mpi-default-dev i386 1.17 [3144 B] Get: 131 http://deb.debian.org/debian trixie/main i386 libboost-mpi1.83-dev i386 1.83.0-3.2 [293 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 libboost-mpi-dev i386 1.83.0.2+b2 [3684 B] Get: 133 http://deb.debian.org/debian trixie/main i386 libboost-program-options1.83.0 i386 1.83.0-3.2 [360 kB] Get: 134 http://deb.debian.org/debian trixie/main i386 libboost-program-options1.83-dev i386 1.83.0-3.2 [390 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 libboost-program-options-dev i386 1.83.0.2+b2 [3616 B] Get: 136 http://deb.debian.org/debian trixie/main i386 libboost-serialization-dev i386 1.83.0.2+b2 [3832 B] Get: 137 http://deb.debian.org/debian trixie/main i386 libboost-thread1.83.0 i386 1.83.0-3.2 [271 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 libboost-thread1.83-dev i386 1.83.0-3.2 [279 kB] Get: 139 http://deb.debian.org/debian trixie/main i386 libboost-thread-dev i386 1.83.0.2+b2 [3632 B] Get: 140 http://deb.debian.org/debian trixie/main i386 libboost-timer1.83.0 i386 1.83.0-3.2 [235 kB] Get: 141 http://deb.debian.org/debian trixie/main i386 libboost-timer1.83-dev i386 1.83.0-3.2 [237 kB] Get: 142 http://deb.debian.org/debian trixie/main i386 libboost-timer-dev i386 1.83.0.2+b2 [3724 B] Get: 143 http://deb.debian.org/debian trixie/main i386 libbrotli-dev i386 1.1.0-2+b4 [313 kB] Get: 144 http://deb.debian.org/debian trixie/main i386 libbtf2 i386 1:7.8.2+dfsg-1 [25.3 kB] Get: 145 http://deb.debian.org/debian trixie/main i386 libc6-dbg i386 2.40-2 [6679 kB] Get: 146 http://deb.debian.org/debian trixie/main i386 libcamd3 i386 1:7.8.2+dfsg-1 [40.6 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 libccolamd3 i386 1:7.8.2+dfsg-1 [42.7 kB] Get: 148 http://deb.debian.org/debian trixie/main i386 libcolamd3 i386 1:7.8.2+dfsg-1 [35.1 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 libcholmod5 i386 1:7.8.2+dfsg-1 [733 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 libcombblas2.0.0t64 i386 2.0.0-3.1+b2 [261 kB] Get: 151 http://deb.debian.org/debian trixie/main i386 libidn2-dev i386 2.3.7-2 [125 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 libnghttp2-dev i386 1.63.0-1 [123 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 libpsl-dev i386 0.21.2-1.1 [78.2 kB] Get: 154 http://deb.debian.org/debian trixie/main i386 libgmpxx4ldbl i386 2:6.3.0+dfsg-2+b1 [330 kB] Get: 155 http://deb.debian.org/debian trixie/main i386 libgmp-dev i386 2:6.3.0+dfsg-2+b1 [659 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 libevent-2.1-7t64 i386 2.1.12-stable-10 [194 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libunbound8 i386 1.20.0-1+b1 [618 kB] Get: 158 http://deb.debian.org/debian trixie/main i386 libgnutls-dane0t64 i386 3.8.6-2 [439 kB] Get: 159 http://deb.debian.org/debian trixie/main i386 libgnutls-openssl27t64 i386 3.8.6-2 [439 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 libp11-kit-dev i386 0.25.5-2 [208 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libtasn1-6-dev i386 4.19.0-3+b2 [101 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 nettle-dev i386 3.10-1 [1333 kB] Get: 163 http://deb.debian.org/debian trixie/main i386 libgnutls28-dev i386 3.8.6-2 [1444 kB] Get: 164 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg+really1.3.1-1 [915 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 librtmp-dev i386 2.4+20151223.gitfa8646d.1-2+b4 [72.1 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libssl-dev i386 3.3.2-1 [2790 kB] Get: 167 http://deb.debian.org/debian trixie/main i386 libssh2-1-dev i386 1.11.0-7 [368 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 libzstd-dev i386 1.5.6+dfsg-1 [352 kB] Get: 169 http://deb.debian.org/debian trixie/main i386 libcurl4-openssl-dev i386 8.9.1-2 [628 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libcxsparse4 i386 1:7.8.2+dfsg-1 [102 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-103-1t64 i386 1.10.10+repack-4 [1241 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 libfftw3-double3 i386 3.3.10-1+b3 [635 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libfftw3-long3 i386 3.3.10-1+b3 [340 kB] Get: 174 http://deb.debian.org/debian trixie/main i386 libfftw3-single3 i386 3.3.10-1+b3 [643 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 libfftw3-mpi3 i386 3.3.10-1+b3 [65.9 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 libmetis5 i386 5.1.0.dfsg-7+b1 [175 kB] Get: 177 http://deb.debian.org/debian trixie/main i386 libptscotch-7.0 i386 7.0.5-1 [812 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libsuperlu-dist8 i386 8.2.1+dfsg1-2 [557 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 libhypre-2.29.0 i386 2.29.0-2+b1 [1473 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libklu2 i386 1:7.8.2+dfsg-1 [95.0 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 mpi-default-bin i386 1.17 [2372 B] Get: 182 http://deb.debian.org/debian trixie/main i386 libscalapack-mpich2.2 i386 2.2.1-3.1+b1 [1437 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 libmumps-5.6t64 i386 5.6.2-2.1+b2 [1865 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 libspqr4 i386 1:7.8.2+dfsg-1 [167 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 libsuperlu6 i386 6.0.1+dfsg1-1+b1 [172 kB] Get: 186 http://deb.debian.org/debian trixie/main i386 libumfpack6 i386 1:7.8.2+dfsg-1 [315 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.9-1+b1 [18.5 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.2-3+b1 [24.8 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.17.0-2 [148 kB] Get: 190 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.7-1+b1 [822 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 libyaml-0-2 i386 0.2.5-1+b1 [55.2 kB] Get: 193 http://deb.debian.org/debian trixie/main i386 ocl-icd-libopencl1 i386 2.3.2-1+b1 [43.5 kB] Get: 194 http://deb.debian.org/debian trixie/main i386 libpetsc-real3.20 i386 3.20.6+dfsg1-3 [5679 kB] Get: 195 http://deb.debian.org/debian trixie/main i386 libpugixml1v5 i386 1.14-2 [94.2 kB] Get: 196 http://deb.debian.org/debian trixie/main i386 libevent-core-2.1-7t64 i386 2.1.12-stable-10 [140 kB] Get: 197 http://deb.debian.org/debian trixie/main i386 libevent-pthreads-2.1-7t64 i386 2.1.12-stable-10 [54.1 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 libnl-3-200 i386 3.7.0-0.3 [61.8 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 libnl-route-3-200 i386 3.7.0-0.3 [193 kB] Get: 200 http://deb.debian.org/debian trixie/main i386 libibverbs1 i386 52.0-2 [66.6 kB] Get: 201 http://deb.debian.org/debian trixie/main i386 libpsm-infinipath1 i386 3.3+20.604758e7-6.3 [177 kB] Get: 202 http://deb.debian.org/debian trixie/main i386 librdmacm1t64 i386 52.0-2 [75.9 kB] Get: 203 http://deb.debian.org/debian trixie/main i386 libfabric1 i386 1.17.0-3+b1 [540 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 libpciaccess0 i386 0.17-3+b1 [53.8 kB] Get: 205 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 206 http://deb.debian.org/debian trixie/main i386 libxnvctrl0 i386 535.171.04-1 [13.7 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 libhwloc-plugins i386 2.11.0-2 [18.3 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 libopenmpi3t64 i386 4.1.6-13.3 [2626 kB] Get: 209 http://deb.debian.org/debian trixie/main i386 libparpack2t64 i386 3.9.1-1.1+b1 [94.3 kB] Get: 210 http://deb.debian.org/debian trixie/main i386 libslepc-real3.20 i386 3.20.2+dfsg1-2+b1 [1006 kB] Get: 211 http://deb.debian.org/debian trixie/main i386 libdolfinx-real0.8 i386 1:0.8.0-11 [647 kB] Get: 212 http://deb.debian.org/debian trixie/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 213 http://deb.debian.org/debian trixie/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 214 http://deb.debian.org/debian trixie/main i386 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB] Get: 215 http://deb.debian.org/debian trixie/main i386 libldl3 i386 1:7.8.2+dfsg-1 [24.6 kB] Get: 216 http://deb.debian.org/debian trixie/main i386 libsuitesparse-mongoose3 i386 1:7.8.2+dfsg-1 [54.5 kB] Get: 217 http://deb.debian.org/debian trixie/main i386 librbio4 i386 1:7.8.2+dfsg-1 [44.9 kB] Get: 218 http://deb.debian.org/debian trixie/main i386 libspex3 i386 1:7.8.2+dfsg-1 [69.6 kB] Get: 219 http://deb.debian.org/debian trixie/main i386 libparu0 i386 1:7.8.2+dfsg-1 [80.5 kB] Get: 220 http://deb.debian.org/debian trixie/main i386 libsuitesparse-dev i386 1:7.8.2+dfsg-1 [1717 kB] Get: 221 http://deb.debian.org/debian trixie/main i386 libscotch-7.0 i386 7.0.5-1 [533 kB] Get: 222 http://deb.debian.org/debian trixie/main i386 libscotch-dev i386 7.0.5-1 [1695 kB] Get: 223 http://deb.debian.org/debian trixie/main i386 libptscotch-dev i386 7.0.5-1 [1532 kB] Get: 224 http://deb.debian.org/debian trixie/main i386 libscalapack-mpich-dev i386 2.2.1-3.1+b1 [10.1 kB] Get: 225 http://deb.debian.org/debian trixie/main i386 libscalapack-mpi-dev i386 2.2.1-3.1+b1 [5224 B] Get: 226 http://deb.debian.org/debian trixie/main i386 libfftw3-quad3 i386 3.3.10-1+b3 [1798 kB] Get: 227 http://deb.debian.org/debian trixie/main i386 libfftw3-bin i386 3.3.10-1+b3 [49.8 kB] Get: 228 http://deb.debian.org/debian trixie/main i386 libfftw3-dev i386 3.3.10-1+b3 [3199 kB] Get: 229 http://deb.debian.org/debian trixie/main i386 libfftw3-mpi-dev i386 3.3.10-1+b3 [70.6 kB] Get: 230 http://deb.debian.org/debian trixie/main i386 opencl-c-headers all 3.0~2024.05.08-1 [46.1 kB] Get: 231 http://deb.debian.org/debian trixie/main i386 opencl-clhpp-headers all 3.0~2024.05.08-1 [49.8 kB] Get: 232 http://deb.debian.org/debian trixie/main i386 ocl-icd-opencl-dev i386 2.3.2-1+b1 [8660 B] Get: 233 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-fortran-102t64 i386 1.10.10+repack-4 [99.1 kB] Get: 234 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-hl-100t64 i386 1.10.10+repack-4 [75.9 kB] Get: 235 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-hl-fortran-100t64 i386 1.10.10+repack-4 [42.1 kB] Get: 236 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-cpp-103-1t64 i386 1.10.10+repack-4 [138 kB] Get: 237 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-hl-cpp-100t64 i386 1.10.10+repack-4 [21.9 kB] Get: 238 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-3 [169 kB] Get: 239 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo-dev i386 1:2.1.5-3 [303 kB] Get: 240 http://deb.debian.org/debian trixie/main i386 libjpeg-dev i386 1:2.1.5-3 [71.9 kB] Get: 241 http://deb.debian.org/debian trixie/main i386 libhdf5-mpich-dev i386 1.10.10+repack-4 [2864 kB] Get: 242 http://deb.debian.org/debian trixie/main i386 libhdf5-mpi-dev i386 1.10.10+repack-4 [15.6 kB] Get: 243 http://deb.debian.org/debian trixie/main i386 libsuperlu-dev i386 6.0.1+dfsg1-1+b1 [21.8 kB] Get: 244 http://deb.debian.org/debian trixie/main i386 libsuperlu-dist-dev i386 8.2.1+dfsg1-2 [867 kB] Get: 245 http://deb.debian.org/debian trixie/main i386 xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 246 http://deb.debian.org/debian trixie/main i386 x11proto-dev all 2024.1-1 [603 kB] Get: 247 http://deb.debian.org/debian trixie/main i386 libxau-dev i386 1:1.0.9-1+b1 [21.6 kB] Get: 248 http://deb.debian.org/debian trixie/main i386 libxdmcp-dev i386 1:1.1.2-3+b1 [41.5 kB] Get: 249 http://deb.debian.org/debian trixie/main i386 xtrans-dev all 1.4.0-1 [98.7 kB] Get: 250 http://deb.debian.org/debian trixie/main i386 libxcb1-dev i386 1.17.0-2 [186 kB] Get: 251 http://deb.debian.org/debian trixie/main i386 libx11-dev i386 2:1.8.7-1+b1 [904 kB] Get: 252 http://deb.debian.org/debian trixie/main i386 libyaml-dev i386 0.2.5-1+b1 [66.8 kB] Get: 253 http://deb.debian.org/debian trixie/main i386 libpetsc3.20-dev-common all 3.20.6+dfsg1-3 [298 kB] Get: 254 http://deb.debian.org/debian trixie/main i386 libhypre-dev i386 2.29.0-2+b1 [1750 kB] Get: 255 http://deb.debian.org/debian trixie/main i386 libmumps-headers-dev all 5.6.2-2.1 [34.7 kB] Get: 256 http://deb.debian.org/debian trixie/main i386 libmumps-dev i386 5.6.2-2.1+b2 [1791 kB] Get: 257 http://deb.debian.org/debian trixie/main i386 valgrind i386 1:3.20.0-2.1 [8861 kB] Get: 258 http://deb.debian.org/debian trixie/main i386 valgrind-mpi i386 1:3.20.0-2.1 [118 kB] Get: 259 http://deb.debian.org/debian trixie/main i386 libpetsc-real3.20-dev i386 3.20.6+dfsg1-3 [6556 kB] Get: 260 http://deb.debian.org/debian trixie/main i386 libparpack2-dev i386 3.9.1-1.1+b1 [110 kB] Get: 261 http://deb.debian.org/debian trixie/main i386 libslepc-real3.20-dev i386 3.20.2+dfsg1-2+b1 [5625 kB] Get: 262 http://deb.debian.org/debian trixie/main i386 libdolfinx-real-dev i386 1:0.8.0-11 [46.8 kB] Get: 263 http://deb.debian.org/debian trixie/main i386 libpugixml-dev i386 1.14-2 [115 kB] Get: 264 http://deb.debian.org/debian trixie/main i386 libxml2-dev i386 2.9.14+dfsg-1.3+b3 [849 kB] Get: 265 http://deb.debian.org/debian trixie/main i386 python3-cffi-backend i386 1.17.1-1 [89.9 kB] Get: 266 http://deb.debian.org/debian trixie/main i386 python3-ply all 3.11-7 [62.6 kB] Get: 267 http://deb.debian.org/debian trixie/main i386 python3-pycparser all 2.22-2 [78.0 kB] Get: 268 http://deb.debian.org/debian trixie/main i386 python3-cffi all 1.17.1-1 [89.3 kB] Get: 269 http://deb.debian.org/debian trixie/main i386 libpython3.12t64 i386 3.12.6-1 [2168 kB] Get: 270 http://deb.debian.org/debian trixie/main i386 libexpat1-dev i386 2.6.3-1 [164 kB] Get: 271 http://deb.debian.org/debian trixie/main i386 libpython3.12-dev i386 3.12.6-1 [5284 kB] Get: 272 http://deb.debian.org/debian trixie/main i386 libpython3-dev i386 3.12.5-1+b1 [10.2 kB] Get: 273 http://deb.debian.org/debian trixie/main i386 python3.12-dev i386 3.12.6-1 [506 kB] Get: 274 http://deb.debian.org/debian trixie/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 275 http://deb.debian.org/debian trixie/main i386 libjs-sphinxdoc all 7.4.7-3 [158 kB] Get: 276 http://deb.debian.org/debian trixie/main i386 python3-dev i386 3.12.5-1+b1 [26.2 kB] Get: 277 http://deb.debian.org/debian trixie/main i386 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 278 http://deb.debian.org/debian trixie/main i386 python3-more-itertools all 10.4.0-1 [63.7 kB] Get: 279 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 280 http://deb.debian.org/debian trixie/main i386 python3-typeguard all 4.3.0-1 [36.5 kB] Get: 281 http://deb.debian.org/debian trixie/main i386 python3-inflect all 7.3.1-1 [42.2 kB] Get: 282 http://deb.debian.org/debian trixie/main i386 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 283 http://deb.debian.org/debian trixie/main i386 python3-jaraco.functools all 4.0.2-1 [11.7 kB] Get: 284 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 285 http://deb.debian.org/debian trixie/main i386 python3-numpy i386 1:1.26.4+ds-11 [4299 kB] Get: 286 http://deb.debian.org/debian trixie/main i386 python3-ufl all 2024.1.0-1 [149 kB] Get: 287 http://deb.debian.org/debian trixie/main i386 python3-basix i386 0.8.0-8 [131 kB] Get: 288 http://deb.debian.org/debian trixie/main i386 python3-zipp all 3.20.1-1 [10.2 kB] Get: 289 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 74.1.2-2 [736 kB] Get: 290 http://deb.debian.org/debian trixie/main i386 python3-ffcx all 1:0.8.0-1 [100 kB] Get: 291 http://deb.debian.org/debian trixie/main i386 libdolfinx-dev i386 1:0.8.0-11 [208 kB] Fetched 213 MB in 2s (116 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19770 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.6-1_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.6-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.3-1_i386.deb ... Unpacking libexpat1:i386 (2.6.3-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.6-1_i386.deb ... Unpacking python3.12-minimal (3.12.6-1) ... Setting up libpython3.12-minimal:i386 (3.12.6-1) ... Setting up libexpat1:i386 (2.6.3-1) ... Setting up python3.12-minimal (3.12.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20090 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.5-1+b1_i386.deb ... Unpacking python3-minimal (3.12.5-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package libkrb5support0:i386. Preparing to unpack .../04-libkrb5support0_1.21.3-3_i386.deb ... Unpacking libkrb5support0:i386 (1.21.3-3) ... Selecting previously unselected package libcom-err2:i386. Preparing to unpack .../05-libcom-err2_1.47.1-1_i386.deb ... Unpacking libcom-err2:i386 (1.47.1-1) ... Selecting previously unselected package libk5crypto3:i386. Preparing to unpack .../06-libk5crypto3_1.21.3-3_i386.deb ... Unpacking libk5crypto3:i386 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:i386. Preparing to unpack .../07-libkeyutils1_1.6.3-3_i386.deb ... Unpacking libkeyutils1:i386 (1.6.3-3) ... Selecting previously unselected package libkrb5-3:i386. Preparing to unpack .../08-libkrb5-3_1.21.3-3_i386.deb ... Unpacking libkrb5-3:i386 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:i386. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_i386.deb ... Unpacking libgssapi-krb5-2:i386 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:i386. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3 to /lib/i386-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/i386-linux-gnu/libtirpc.so.3.0.0 to /lib/i386-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:i386 (1.3.4+ds-1.3) ... Selecting previously unselected package libnsl2:i386. Preparing to unpack .../12-libnsl2_1.3.0-3+b2_i386.deb ... Unpacking libnsl2:i386 (1.3.0-3+b2) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../14-libreadline8t64_8.2-5_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:i386. Preparing to unpack .../15-libpython3.12-stdlib_3.12.6-1_i386.deb ... Unpacking libpython3.12-stdlib:i386 (3.12.6-1) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.6-1_i386.deb ... Unpacking python3.12 (3.12.6-1) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../17-libpython3-stdlib_3.12.5-1+b1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.12.5-1+b1) ... Setting up python3-minimal (3.12.5-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21164 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.5-1+b1_i386.deb ... Unpacking python3 (3.12.5-1+b1) ... Selecting previously unselected package libproc2-0:i386. Preparing to unpack .../001-libproc2-0_2%3a4.0.4-5_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-5) ... Selecting previously unselected package procps. Preparing to unpack .../002-procps_2%3a4.0.4-5_i386.deb ... Unpacking procps (2:4.0.4-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.45-3_i386.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../005-libmagic1t64_1%3a5.45-3_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.45-3_i386.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.22.5-2_i386.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../008-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../009-groff-base_1.23.0-5_i386.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../010-bsdextrautils_2.40.2-8_i386.deb ... Unpacking bsdextrautils (2.40.2-8) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../011-libpipeline1_1.5.8-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../012-man-db_2.13.0-1_i386.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../013-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../014-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../015-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../016-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../017-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../018-libicu72_72.1-5_i386.deb ... Unpacking libicu72:i386 (72.1-5) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../019-libxml2_2.9.14+dfsg-1.3+b3_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package libarchive13t64:i386. Preparing to unpack .../020-libarchive13t64_3.7.4-1_i386.deb ... Unpacking libarchive13t64:i386 (3.7.4-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../021-libbrotli1_1.1.0-2+b4_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b4) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../022-libsasl2-modules-db_2.1.28+dfsg1-8_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg1-8) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../023-libsasl2-2_2.1.28+dfsg1-8_i386.deb ... Unpacking libsasl2-2:i386 (2.1.28+dfsg1-8) ... Selecting previously unselected package libldap-2.5-0:i386. Preparing to unpack .../024-libldap-2.5-0_2.5.18+dfsg-3_i386.deb ... Unpacking libldap-2.5-0:i386 (2.5.18+dfsg-3) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../025-libnghttp2-14_1.63.0-1_i386.deb ... Unpacking libnghttp2-14:i386 (1.63.0-1) ... Selecting previously unselected package libpsl5t64:i386. Preparing to unpack .../026-libpsl5t64_0.21.2-1.1_i386.deb ... Unpacking libpsl5t64:i386 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:i386. Preparing to unpack .../027-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_i386.deb ... Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:i386. Preparing to unpack .../028-libssh2-1t64_1.11.0-7_i386.deb ... Unpacking libssh2-1t64:i386 (1.11.0-7) ... Selecting previously unselected package libcurl4t64:i386. Preparing to unpack .../029-libcurl4t64_8.9.1-2_i386.deb ... Unpacking libcurl4t64:i386 (8.9.1-2) ... Selecting previously unselected package libjsoncpp25:i386. Preparing to unpack .../030-libjsoncpp25_1.9.5-6+b2_i386.deb ... Unpacking libjsoncpp25:i386 (1.9.5-6+b2) ... Selecting previously unselected package librhash0:i386. Preparing to unpack .../031-librhash0_1.4.3-3+b1_i386.deb ... Unpacking librhash0:i386 (1.4.3-3+b1) ... 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Setting up m4 (1.4.19-4) ... Setting up libevent-2.1-7t64:i386 (2.1.12-stable-10) ... Setting up libmetis5:i386 (5.1.0.dfsg-7+b1) ... Setting up libcom-err2:i386 (1.47.1-1) ... Setting up libldl3:i386 (1:7.8.2+dfsg-1) ... Setting up file (1:5.45-3) ... Setting up libboost-filesystem1.83.0:i386 (1.83.0-3.2) ... Setting up libaec0:i386 (1.1.3-1) ... Setting up libpugixml1v5:i386 (1.14-2) ... Setting up libelf1t64:i386 (0.191-2) ... Setting up libpsl-dev:i386 (0.21.2-1.1) ... Setting up libc6-dbg:i386 (2.40-2) ... Setting up libkrb5support0:i386 (1.21.3-3) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg1-8) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Oct 20 13:11:52 UTC 2025. Universal Time is now: Mon Oct 20 13:11:52 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libboost-atomic1.83.0:i386 (1.83.0-3.2) ... Setting up libboost-serialization1.83.0:i386 (1.83.0-3.2) ... 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Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libboost-mpi1.83.0 (1.83.0-3.2) ... Setting up valgrind (1:3.20.0-2.1) ... Setting up libtasn1-6-dev:i386 (4.19.0-3+b2) ... Setting up valgrind-mpi (1:3.20.0-2.1) ... Setting up readline-common (8.2-5) ... Setting up libicu-dev:i386 (72.1-5) ... Setting up libxml2:i386 (2.9.14+dfsg-1.3+b3) ... Setting up libbrotli-dev:i386 (1.1.0-2+b4) ... Setting up libp11-kit-dev:i386 (0.25.5-2) ... Setting up libblas-dev:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so to provide /usr/lib/i386-linux-gnu/libblas.so (libblas.so-i386-linux-gnu) in auto mode Setting up libsz2:i386 (1.1.3-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libgfortran-14-dev:i386 (14.2.0-3) ... Setting up x11proto-dev (2024.1-1) ... 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Setting up libjs-sphinxdoc (7.4.7-3) ... Setting up ocl-icd-opencl-dev:i386 (2.3.2-1+b1) ... Setting up libccolamd3:i386 (1:7.8.2+dfsg-1) ... Setting up libreadline8t64:i386 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libbasix0.8:i386 (0.8.0-8) ... Setting up libhwloc-dev:i386 (2.11.0-2) ... Setting up gfortran-14 (14.2.0-3) ... Setting up libsuperlu-dev:i386 (6.0.1+dfsg1-1+b1) ... Setting up libbasix-dev:i386 (0.8.0-8) ... Setting up libarchive13t64:i386 (3.7.4-1) ... Setting up libfftw3-dev:i386 (3.3.10-1+b3) ... Setting up libboost-timer-dev:i386 (1.83.0.2+b2) ... Setting up libboost-filesystem-dev:i386 (1.83.0.2+b2) ... Setting up libboost-thread1.83-dev:i386 (1.83.0-3.2) ... Setting up libgnutls28-dev:i386 (3.8.6-2) ... Setting up libnghttp2-dev:i386 (1.63.0-1) ... Setting up libibverbs1:i386 (52.0-2) ... Setting up libcholmod5:i386 (1:7.8.2+dfsg-1) ... Setting up libarpack2-dev:i386 (3.9.1-1.1+b1) ... Setting up libxcb1-dev:i386 (1.17.0-2) ... Setting up libcurl4t64:i386 (8.9.1-2) ... Setting up libtirpc3t64:i386 (1.3.4+ds-1.3) ... Setting up libspqr4:i386 (1:7.8.2+dfsg-1) ... Setting up libsuperlu-dist8:i386 (8.2.1+dfsg1-2) ... Setting up mpich (4.2.0-14) ... update-alternatives: using /usr/bin/mpicc.mpich to provide /usr/bin/mpicc (mpi) in auto mode update-alternatives: using /usr/bin/mpirun.mpich to provide /usr/bin/mpirun (mpirun) in auto mode Setting up libboost-iostreams1.83-dev:i386 (1.83.0-3.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libfftw3-mpi-dev:i386 (3.3.10-1+b3) ... Setting up mpi-default-bin (1.17) ... Setting up libx11-dev:i386 (2:1.8.7-1+b1) ... Setting up libscalapack-mpich2.2:i386 (2.2.1-3.1+b1) ... Setting up libboost-iostreams-dev:i386 (1.83.0.2+b2) ... Setting up libhwloc-plugins:i386 (2.11.0-2) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libsuperlu-dist-dev:i386 (8.2.1+dfsg1-2) ... Setting up libhdf5-mpich-103-1t64:i386 (1.10.10+repack-4) ... Setting up gfortran-i686-linux-gnu (4:14.1.0-2) ... Setting up libklu2:i386 (1:7.8.2+dfsg-1) ... Setting up libmumps-5.6t64:i386 (5.6.2-2.1+b2) ... Setting up librtmp-dev:i386 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libmpich-dev:i386 (4.2.0-14) ... update-alternatives: using /usr/include/i386-linux-gnu/mpich to provide /usr/include/i386-linux-gnu/mpi (mpi-i386-linux-gnu) in auto mode Setting up libscalapack-mpich-dev:i386 (2.2.1-3.1+b1) ... Setting up libumfpack6:i386 (1:7.8.2+dfsg-1) ... Setting up mpi-default-dev (1.17) ... Setting up libnsl2:i386 (1.3.0-3+b2) ... Setting up cmake (3.30.3-1) ... Setting up librdmacm1t64:i386 (52.0-2) ... Setting up libscalapack-mpi-dev:i386 (2.2.1-3.1+b1) ... Setting up libhypre-2.29.0:i386 (2.29.0-2+b1) ... Setting up libhdf5-mpich-hl-100t64:i386 (1.10.10+repack-4) ... Setting up libboost-thread-dev:i386 (1.83.0.2+b2) ... Setting up libfabric1:i386 (1.17.0-3+b1) ... Setting up libpython3.12-stdlib:i386 (3.12.6-1) ... Setting up libmumps-dev:i386 (5.6.2-2.1+b2) ... Setting up libscotch-dev (7.0.5-1) ... Setting up python3.12 (3.12.6-1) ... Setting up libhdf5-mpich-fortran-102t64:i386 (1.10.10+repack-4) ... Setting up debhelper (13.20) ... Setting up libparu0:i386 (1:7.8.2+dfsg-1) ... Setting up libhypre-dev:i386 (2.29.0-2+b1) ... Setting up libpetsc-real3.20:i386 (3.20.6+dfsg1-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/libpetsc_real.so.3.20.6 to provide /usr/lib/i386-linux-gnu/libpetsc.so.3.20 (libpetsc.so.3.20) in auto mode Setting up libptscotch-dev (7.0.5-1) ... Setting up gfortran (4:14.1.0-2) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libhdf5-mpich-cpp-103-1t64:i386 (1.10.10+repack-4) ... Setting up libpython3.12t64:i386 (3.12.6-1) ... Setting up libboost-mpi1.83-dev (1.83.0-3.2) ... Setting up libboost-mpi-dev (1.83.0.2+b2) ... Setting up libcurl4-openssl-dev:i386 (8.9.1-2) ... Setting up libhdf5-mpich-hl-cpp-100t64:i386 (1.10.10+repack-4) ... Setting up libopenmpi3t64:i386 (4.1.6-13.3) ... Setting up libhdf5-mpich-hl-fortran-100t64:i386 (1.10.10+repack-4) ... Setting up libparpack2t64:i386 (3.9.1-1.1+b1) ... Setting up libpython3-stdlib:i386 (3.12.5-1+b1) ... Setting up libslepc-real3.20 (3.20.2+dfsg1-2+b1) ... update-alternatives: using /usr/lib/i386-linux-gnu/libslepc_real.so.3.20.2 to provide /usr/lib/i386-linux-gnu/libslepc.so.3.20 (libslepc.so.3.20) in auto mode Setting up libdolfinx-real0.8:i386 (1:0.8.0-11) ... Setting up libsuitesparse-dev:i386 (1:7.8.2+dfsg-1) ... Setting up libparpack2-dev:i386 (3.9.1-1.1+b1) ... Setting up libhdf5-mpich-dev (1.10.10+repack-4) ... update-alternatives: using /usr/bin/h5pcc.mpich to provide /usr/bin/h5pcc (h5pcc) in auto mode update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-mpich.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode update-alternatives: updating alternative /usr/bin/mpicc.mpich because link group mpi has changed slave links update-alternatives: using /usr/lib/i386-linux-gnu/pkgconfig/hdf5-mpi.pc to provide /usr/lib/i386-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up python3 (3.12.5-1+b1) ... /usr/share/petsc/3.20/lib/petsc/bin/petsc_tas_analysis.py:792: SyntaxWarning: invalid escape sequence '\l' axMeshConv.set(xlabel='Problem Size $\log N$', /usr/share/petsc/3.20/lib/petsc/bin/petsc_tas_analysis.py:793: SyntaxWarning: invalid escape sequence '\l' ylabel='Error $\log |x - x^*|$', title='Mesh Convergence') /usr/share/petsc/3.20/lib/petsc/bin/petsclogformat.py:253: SyntaxWarning: invalid escape sequence '\d' print("\documentclass{article}") /usr/share/petsc/3.20/lib/petsc/bin/petsclogformat.py:256: SyntaxWarning: invalid escape sequence '\c' print("\centering") /usr/share/petsc/3.20/lib/petsc/bin/petsclogformat.py:259: SyntaxWarning: invalid escape sequence '\m' print(" & & \multicolumn{4}{c}{--------------- Percent of -------------} & \\\\") /usr/share/petsc/3.20/lib/petsc/bin/petsclogformat.py:261: SyntaxWarning: invalid escape sequence '\h' print("\hline") /usr/share/petsc/3.20/lib/petsc/bin/petsclogformat.py:321: SyntaxWarning: invalid escape sequence '\e' print("\end{tabular}") /usr/share/petsc/3.20/lib/petsc/bin/petsclogformat.py:322: SyntaxWarning: invalid escape sequence '\e' print("\end{table}") /usr/share/petsc/3.20/lib/petsc/bin/petsclogformat.py:323: SyntaxWarning: invalid escape sequence '\e' print("\end{document}") Setting up libpython3.12-dev:i386 (3.12.6-1) ... Setting up python3-zipp (3.20.1-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up libhdf5-mpi-dev (1.10.10+repack-4) ... Setting up python3.12-dev (3.12.6-1) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-cffi-backend:i386 (1.17.1-1) ... Setting up python3-more-itertools (10.4.0-1) ... Setting up libpython3-dev:i386 (3.12.5-1+b1) ... Setting up python3-jaraco.functools (4.0.2-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-ply (3.11-7) ... Setting up python3-typeguard (4.3.0-1) ... Setting up libpetsc3.20-dev-common (3.20.6+dfsg1-3) ... Setting up libpetsc-real3.20-dev:i386 (3.20.6+dfsg1-3) ... update-alternatives: error: no alternatives for petsc update-alternatives: using /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real to provide /usr/lib/petsc (petsc) in auto mode update-alternatives: using /usr/lib/i386-linux-gnu/libpetsc_real.so.3.20.6 to provide /usr/lib/i386-linux-gnu/libpetsc_real.so (libpetsc_real.so) in auto mode update-alternatives: using /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real to provide /usr/lib/petscdir/3.20 (petsc3.20) in auto mode Setting up python3-pycparser (2.22-2) ... Setting up python3-inflect (7.3.1-1) ... Setting up libslepc-real3.20-dev (3.20.2+dfsg1-2+b1) ... update-alternatives: error: no alternatives for slepc update-alternatives: using /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real to provide /usr/lib/slepc (slepc) in auto mode update-alternatives: using /usr/lib/i386-linux-gnu/libslepc_real.so.3.20.2 to provide /usr/lib/i386-linux-gnu/libslepc_real.so (libslepc_real.so) in auto mode update-alternatives: using /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real to provide /usr/lib/slepcdir/3.20 (slepc3.20) in auto mode Setting up python3-dev (3.12.5-1+b1) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up python3-cffi (1.17.1-1) ... Setting up libdolfinx-real-dev:i386 (1:0.8.0-11) ... Setting up python3-numpy (1:1.26.4+ds-11) ... Setting up python3-ufl (2024.1.0-1) ... Setting up python3-basix (0.8.0-8) ... Setting up python3-ffcx (1:0.8.0-1) ... Setting up libdolfinx-dev:i386 (1:0.8.0-11) ... Processing triggers for libc-bin (2.40-2) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/5841/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/5841/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../fenicsx-performance-tests_0.8.0-1_source.changes dpkg-buildpackage: info: source package fenicsx-performance-tests dpkg-buildpackage: info: source version 0.8.0-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Francesco Ballarin dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem=cmake --sourcedirectory=src dh_auto_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf_clean -O--buildsystem=cmake -O--sourcedirectory=src dh_clean -O--buildsystem=cmake -O--sourcedirectory=src debian/rules binary dh binary --buildsystem=cmake --sourcedirectory=src dh_update_autotools_config -O--buildsystem=cmake -O--sourcedirectory=src dh_autoreconf -O--buildsystem=cmake -O--sourcedirectory=src debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' dh_auto_configure -- -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF cd obj-i686-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -D CMAKE_SKIP_RPATH:BOOL=ON -DCMAKE_INSTALL_RPATH_USE_LINK_PATH:BOOL=OFF ../src -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found MPI_C: /usr/lib/i386-linux-gnu/mpich/lib/libmpich.so (found version "4.1") -- Found MPI_CXX: /usr/lib/i386-linux-gnu/mpich/lib/libmpichcxx.so (found version "4.1") -- Found MPI: TRUE (found version "4.1") CMake Warning (dev) at /usr/share/cmake-3.30/Modules/CMakeFindDependencyMacro.cmake:76 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. Call Stack (most recent call first): /usr/lib/i386-linux-gnu/cmake/dolfinx/DOLFINXConfig.cmake:54 (find_dependency) CMakeLists.txt:16 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost 1.83.0 at /usr/lib/i386-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: QUIET REQUIRED COMPONENTS timer -- Found boost_headers 1.83.0 at /usr/lib/i386-linux-gnu/cmake/boost_headers-1.83.0 -- Found boost_timer 1.83.0 at /usr/lib/i386-linux-gnu/cmake/boost_timer-1.83.0 -- [x] libboost_timer.so.1.83.0 -- [ ] libboost_timer.a -- Adding boost_timer dependencies: headers -- Found Boost: /usr/lib/i386-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: timer -- Found Python3: /usr/bin/python3 (found version "3.12.6") found components: Interpreter -- Adding /usr/lib/python3/dist-packages/basix to Basix search hints -- HDF5: Using hdf5 compiler wrapper to determine C configuration -- Found HDF5: /usr/lib/i386-linux-gnu/hdf5/mpich/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so (found version "1.10.10") found components: C -- HDF5_DIR: HDF5_DIR-NOTFOUND -- HDF5_DEFINITIONS: -D_FILE_OFFSET_BITS=64 -- HDF5_INCLUDE_DIRS: /usr/include/hdf5/mpich -- HDF5_LIBRARIES: /usr/lib/i386-linux-gnu/hdf5/mpich/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so -- HDF5_HL_LIBRARIES: -- HDF5_C_DEFINITIONS: -D_FILE_OFFSET_BITS=64 -- HDF5_C_INCLUDE_DIR: -- HDF5_C_INCLUDE_DIRS: /usr/include/hdf5/mpich -- HDF5_C_LIBRARY: -- HDF5_C_LIBRARIES: /usr/lib/i386-linux-gnu/hdf5/mpich/libhdf5.so;/usr/lib/i386-linux-gnu/libcrypto.so;/usr/lib/i386-linux-gnu/libcurl.so;/usr/lib/i386-linux-gnu/libsz.so;/usr/lib/i386-linux-gnu/libz.so;/usr/lib/i386-linux-gnu/libdl.a;/usr/lib/i386-linux-gnu/libm.so -- HDF5_C_HL_LIBRARY: -- HDF5_C_HL_LIBRARIES: -- Defined targets (if any): -- ... hdf5::hdf5 -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for one of the modules 'PETSc;petsc' -- Looking for PETSC_USE_COMPLEX -- Looking for PETSC_USE_COMPLEX - not found -- Checking for one of the modules 'SLEPc;slepc' CMake Warning (dev) at CMakeLists.txt:52 (find_package): Policy CMP0167 is not set: The FindBoost module is removed. Run "cmake --help-policy CMP0167" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Found Boost 1.83.0 at /usr/lib/i386-linux-gnu/cmake/Boost-1.83.0 -- Requested configuration: QUIET REQUIRED COMPONENTS program_options -- Found boost_program_options 1.83.0 at /usr/lib/i386-linux-gnu/cmake/boost_program_options-1.83.0 -- [x] libboost_program_options.so.1.83.0 -- [ ] libboost_program_options.a -- Adding boost_program_options dependencies: headers -- Found Boost: /usr/lib/i386-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.70") found components: program_options -- -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -- Configuring done (3.8s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' dh_auto_build -O--buildsystem=cmake -O--sourcedirectory=src cd obj-i686-linux-gnu && make -j5 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/CMakeFiles /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/depend make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' [ 9%] Generating Poisson.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Poisson.py [ 18%] Generating Elasticity.c ffcx /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/Elasticity.py cd /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/fenicsx-performance-tests-0.8.0/src /build/reproducible-path/fenicsx-performance-tests-0.8.0/src /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/CMakeFiles/dolfinx-scaling-test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' make -f CMakeFiles/dolfinx-scaling-test.dir/build.make CMakeFiles/dolfinx-scaling-test.dir/build make[3]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' [ 27%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/main.cpp [ 36%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mesh.cpp [ 45%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK 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/build/reproducible-path/fenicsx-performance-tests-0.8.0/src/elasticity_problem.cpp [ 54%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/poisson_problem.cpp [ 63%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/cgpoisson_problem.cpp [ 72%] Building CXX object CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o /usr/bin/c++ -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real/include -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -std=c++20 -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -MF CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o.d -o CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/src/mem.cpp [ 81%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o /usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/Elasticity.c [ 90%] Building C object CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o /usr/bin/cc -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_TIMER_DYN_LINK -DBOOST_TIMER_NO_LIB -DDOLFINX_VERSION=\"0.8.0\" -DHAS_PETSC -DHAS_PTSCOTCH -DHAS_SLEPC -D_FILE_OFFSET_BITS=64 -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu -I/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -isystem /usr/lib/python3/dist-packages/ffcx/codegeneration -isystem /usr/lib/i386-linux-gnu/mpich/include -isystem /usr/include/hdf5/mpich -isystem /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -isystem /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real/include -Ofast -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wdate-time -D_FORTIFY_SOURCE=2 -MD -MT CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -MF CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o.d -o CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o -c /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/Poisson.c [100%] Linking CXX executable dolfinx-scaling-test /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfinx-scaling-test.dir/link.txt --verbose=1 /usr/bin/c++ -Ofast -g -O2 -ffile-prefix-map=/build/reproducible-path/fenicsx-performance-tests-0.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -Wl,-z,relro "CMakeFiles/dolfinx-scaling-test.dir/main.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mesh.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/elasticity_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/cgpoisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/poisson_problem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/mem.cpp.o" "CMakeFiles/dolfinx-scaling-test.dir/Elasticity.c.o" "CMakeFiles/dolfinx-scaling-test.dir/Poisson.c.o" -o dolfinx-scaling-test /usr/lib/i386-linux-gnu/libdolfinx_real.so.0.8.0 /usr/lib/i386-linux-gnu/libboost_program_options.so.1.83.0 -lpthread /usr/lib/i386-linux-gnu/libpugixml.so.1.14 /usr/lib/i386-linux-gnu/libbasix.so.0.8.0 /usr/lib/i386-linux-gnu/libboost_timer.so.1.83.0 /usr/lib/i386-linux-gnu/mpich/lib/libmpichcxx.so /usr/lib/i386-linux-gnu/mpich/lib/libmpich.so /usr/lib/i386-linux-gnu/hdf5/mpich/libhdf5.so /usr/lib/slepcdir/slepc3.20/i386-linux-gnu-real/lib/libslepc_real.so /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib/libpetsc_real.so make[3]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' [100%] Built target dolfinx-scaling-test make[2]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' debian/tests/run-dolfinx-scaling-test -p /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu ==== elasticity weak scaling (3 processes with ndofs=10000) ==== Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 2025-10-21 03:12:50.894 ( 0.274s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks 2025-10-21 03:12:50.894 ( 0.274s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph 2025-10-21 03:12:50.894 ( 0.274s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2025-10-21 03:12:50.921 ( 0.301s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph 2025-10-21 03:12:50.932 ( 0.313s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:50.938 ( 0.318s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:50.938 ( 0.319s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 2025-10-21 03:12:50.970 ( 0.351s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) 2025-10-21 03:12:50.970 ( 0.351s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH 2025-10-21 03:12:55.519 ( 4.899s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2025-10-21 03:12:55.542 ( 4.922s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2025-10-21 03:12:55.627 ( 5.007s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2025-10-21 03:12:55.665 ( 5.045s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(121) 722-16348 2025-10-21 03:12:55.676 ( 5.056s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) 2025-10-21 03:12:55.676 ( 5.056s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) 2025-10-21 03:12:55.686 ( 5.066s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2025-10-21 03:12:55.710 ( 5.090s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2025-10-21 03:12:55.773 ( 5.153s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices 2025-10-21 03:12:55.773 ( 5.154s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 2025-10-21 03:12:55.794 ( 5.174s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 2025-10-21 03:12:55.820 ( 5.200s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2025-10-21 03:12:55.838 ( 5.218s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2025-10-21 03:12:55.871 ( 5.251s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:55.902 ( 5.282s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:55.914 ( 5.294s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:55.922 ( 5.303s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:55.938 ( 5.319s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2025-10-21 03:12:55.938 ( 5.319s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2025-10-21 03:12:55.938 ( 5.319s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 2025-10-21 03:12:55.939 ( 5.319s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:55.939 ( 5.319s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:55.939 ( 5.319s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 2025-10-21 03:12:55.946 ( 5.326s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2025-10-21 03:12:55.946 ( 5.327s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17510x4 2025-10-21 03:12:55.948 ( 5.329s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation UnitCube (24x19x19) to be refined 0 times 2025-10-21 03:12:55.954 ( 5.335s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2025-10-21 03:12:55.954 ( 5.335s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2025-10-21 03:12:55.955 ( 5.335s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:55.955 ( 5.335s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:55.956 ( 5.336s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 2025-10-21 03:12:55.959 ( 5.340s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:55.961 ( 5.341s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:55.982 ( 5.363s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:55.983 ( 5.363s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:55.983 ( 5.363s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2025-10-21 03:12:55.983 ( 5.363s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. 2025-10-21 03:12:55.984 ( 5.364s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2025-10-21 03:12:55.984 ( 5.364s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17510x4 2025-10-21 03:12:55.986 ( 5.366s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2025-10-21 03:12:55.986 ( 5.366s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2025-10-21 03:12:55.986 ( 5.366s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2025-10-21 03:12:55.986 ( 5.366s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:55.986 ( 5.366s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:55.986 ( 5.367s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2025-10-21 03:12:55.986 ( 5.367s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2025-10-21 03:12:55.986 ( 5.367s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) 2025-10-21 03:12:56.003 ( 5.383s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 226 to 548 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 dolfinx hash: debian_1:0.8.0-11 ufl hash: ea06373d6123e47e4a3c75d92f167503ae508922 petsc version: Petsc Release Version 3.20.6, Mar 29, 2024 Problem type: elasticity Scaling type: weak Num processes: 3 Num cells: 51984 (52 thousand) Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- 2025-10-21 03:12:56.452 ( 5.832s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = -1. -1. -1. Threshold scaling factor for each level not specified = 1. AGG specific options Number of levels of aggressive coarsening 1 MIS-k aggressive coarsening MIS-2 coarsening on aggressive levels Number smoothing steps 1 Complexity: grid = 1.072 operator = 1.29127 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 3 MPI processes type: bjacobi number of blocks = 3 Local solver information for first block is in the following KSP and PC objects on rank 0: Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks KSP Object: (mg_coarse_sub_) 1 MPI process type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.09268 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=228, cols=228, bs=6 package used to perform factorization: petsc total: nonzeros=48384, allocated nonzeros=48384 using I-node routines: found 59 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=228, cols=228, bs=6 total: nonzeros=44280, allocated nonzeros=44280 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 73 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=228, cols=228, bs=6 total: nonzeros=44280, allocated nonzeros=44280 total number of mallocs used during MatSetValues calls=0 using I-node (on process 0) routines: found 73 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.284422, max 3.12864 eigenvalues provided (min 1.85675e-06, max 2.84422) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=1932, cols=1932, bs=6 total: nonzeros=320256, allocated nonzeros=320256 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 202 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.257701, max 2.83471 eigenvalues provided (min 0.0695496, max 2.57701) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3417 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3417 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 5.060000 5.060000 Build dofmap data | 2 0.000000 0.000000 Build sparsity | 1 0.010000 0.010000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.030000 0.030000 Compute graph partition (SCOTCH) | 1 4.520000 4.520000 Compute local part of mesh dual graph | 2 0.035000 0.070000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.060000 0.060000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute AdjacencyList nodes to destination ranks | 1 0.140000 0.140000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 6 0.000000 0.000000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 Init MPI | 1 0.210000 0.210000 Init PETSc | 1 0.040000 0.040000 Init dofmap from element dofmap | 2 0.000000 0.000000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 0.560000 0.560000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.030000 0.030000 SCOTCH: call SCOTCH_dgraphPart | 1 4.490000 4.490000 SparsityPattern::finalize | 1 0.000000 0.000000 Topology: create | 1 0.280000 0.280000 Topology: determine shared index ownership | 1 0.110000 0.110000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble matrix | 1 0.170000 0.170000 ZZZ Assemble vector | 1 0.020000 0.020000 ZZZ Create Mesh | 1 5.080000 5.080000 ZZZ Create RHS function | 1 0.000000 0.000000 ZZZ Create boundary conditions | 1 0.010000 0.010000 ZZZ Create facets and facet->cell connectivity | 1 0.030000 0.030000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.010000 0.010000 ZZZ FunctionSpace | 1 0.000000 0.000000 ZZZ Solve | 1 0.640000 0.640000 *** Number of Krylov iterations: 23 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processors, by pbuilder2 Tue Oct 21 03:12:57 2025 Using Petsc Release Version 3.20.6, Mar 29, 2024 Max Max/Min Avg Total Time (sec): 6.149e+00 1.000 6.149e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 2.275e+08 1.030 2.249e+08 6.747e+08 Flops/sec: 3.699e+07 1.030 3.658e+07 1.097e+08 MPI Msg Count: 9.190e+02 1.041 8.953e+02 2.686e+03 MPI Msg Len (bytes): 7.147e+06 1.438 6.600e+03 1.773e+07 MPI Reductions: 5.450e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 6.1490e+00 100.0% 6.7473e+08 100.0% 2.686e+03 100.0% 6.600e+03 100.0% 5.270e+02 96.7% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 121 1.0 1.1221e-01 4.8 0.00e+00 0.0 2.2e+02 4.0e+00 1.2e+02 1 0 8 0 22 1 0 8 0 23 0 BuildTwoSidedF 86 1.0 1.1186e-01 4.9 0.00e+00 0.0 1.1e+02 3.8e+04 8.6e+01 1 0 4 24 16 1 0 4 24 16 0 MatMult 235 1.0 1.2745e-01 1.1 1.32e+08 1.0 1.4e+03 5.6e+03 0.0e+00 2 57 52 44 0 2 57 52 44 0 3034 MatMultAdd 48 1.0 2.4211e-02 5.1 1.10e+07 1.0 1.9e+02 1.4e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 1349 MatMultTranspose 48 1.0 2.5081e-02 1.5 1.10e+07 1.0 1.9e+02 1.4e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 1304 MatSolve 24 0.0 1.4356e-03 0.0 2.32e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1614 MatLUFactorSym 1 1.0 1.2156e-03 178.8 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 2.4301e-03 2205.1 5.91e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2431 MatConvert 1 1.0 1.3838e-04 1.1 0.00e+00 0.0 1.2e+01 7.0e+02 1.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatScale 4 1.0 2.9300e-04 1.1 4.58e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4645 MatResidual 48 1.0 2.9043e-02 1.3 2.58e+07 1.0 2.9e+02 5.3e+03 0.0e+00 0 11 11 9 0 0 11 11 9 0 2598 MatAssemblyBegin 59 1.0 1.2491e-01 3.7 0.00e+00 0.0 1.1e+02 3.8e+04 3.0e+01 1 0 4 24 6 1 0 4 24 6 0 MatAssemblyEnd 59 1.0 5.7394e-02 1.1 7.93e+04 1.9 2.1e+02 3.9e+02 1.2e+02 1 0 8 0 22 1 0 8 0 23 3 MatGetRowIJ 1 0.0 3.4883e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 2 1.0 6.0958e-03 1.0 0.00e+00 0.0 1.4e+01 2.9e+04 3.0e+01 0 0 1 2 6 0 0 1 2 6 0 MatGetOrdering 1 0.0 8.3606e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 1.5390e-02 1.0 1.38e+05 1.0 2.9e+02 6.4e+02 1.0e+02 0 0 11 1 19 0 0 11 1 20 26 MatZeroEntries 3 1.0 2.0726e-04 6.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 2.3748e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 MatAXPY 4 1.0 1.2552e-02 1.0 1.15e+05 1.0 2.4e+01 4.0e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 27 MatTranspose 10 1.0 6.4213e-03 1.6 0.00e+00 0.0 1.3e+02 1.6e+03 3.6e+01 0 0 5 1 7 0 0 5 1 7 0 MatMatMultSym 9 1.0 3.5122e-02 1.1 0.00e+00 0.0 7.5e+01 8.1e+03 3.0e+01 1 0 3 3 6 1 0 3 3 6 0 MatMatMultNum 3 1.0 7.3172e-03 1.0 6.47e+06 1.0 1.5e+01 2.5e+04 3.0e+00 0 3 1 2 1 0 3 1 2 1 2580 MatPtAPSymbolic 3 1.0 9.3409e-02 1.0 0.00e+00 0.0 9.9e+01 3.4e+04 2.1e+01 2 0 4 19 4 2 0 4 19 4 0 MatPtAPNumeric 3 1.0 1.4360e-01 1.0 5.22e+07 1.1 6.6e+01 4.0e+04 1.8e+01 2 23 2 15 3 2 23 2 15 3 1069 MatGetLocalMat 9 1.0 2.4148e-03 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 9 1.0 6.7095e-03 1.0 0.00e+00 0.0 1.1e+02 3.2e+04 0.0e+00 0 0 4 21 0 0 0 4 21 0 0 VecMDot 20 1.0 1.2991e-03 2.2 1.19e+06 1.1 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 2704 VecTDot 48 1.0 2.3401e-02 2.3 9.84e+05 1.1 0.0e+00 0.0e+00 4.8e+01 0 0 0 0 9 0 0 0 0 9 123 VecNorm 46 1.0 1.7248e-02 9.6 7.31e+05 1.1 0.0e+00 0.0e+00 4.6e+01 0 0 0 0 8 0 0 0 0 9 124 VecScale 22 1.0 4.9716e-05 1.0 1.19e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 7065 VecCopy 148 1.0 2.4394e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 169 1.0 1.5146e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 48 1.0 4.0496e-04 1.0 9.65e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 6973 VecAYPX 310 1.0 1.4730e-03 1.1 2.54e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 5058 VecAXPBYCZ 96 1.0 9.3849e-04 1.1 2.61e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8166 VecMAXPY 22 1.0 4.8695e-04 1.1 1.41e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8525 VecAssemblyBegin 57 1.0 3.8216e-04 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 5.6e+01 0 0 0 0 10 0 0 0 0 11 0 VecAssemblyEnd 57 1.0 2.4184e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 214 1.0 1.3586e-03 1.1 1.16e+06 1.1 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2515 VecScatterBegin 388 1.0 3.1035e-03 1.3 0.00e+00 0.0 2.0e+03 4.3e+03 0.0e+00 0 0 73 48 0 0 0 73 48 0 0 VecScatterEnd 388 1.0 8.7438e-02 1.1 1.37e+04 1.5 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 VecNormalize 22 1.0 5.3814e-04 1.2 3.58e+05 1.1 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 4 0 0 0 0 4 1958 SFSetGraph 35 1.0 9.0878e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 35 1.0 2.8123e-02 1.0 0.00e+00 0.0 3.2e+02 3.8e+02 3.5e+01 0 0 12 1 6 0 0 12 1 7 0 SFBcastBegin 15 1.0 7.6365e-05 1.7 0.00e+00 0.0 9.0e+01 6.4e+02 0.0e+00 0 0 3 0 0 0 0 3 0 0 0 SFBcastEnd 15 1.0 1.1447e-04 3.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 4 1.0 1.2442e-04 3.2 0.00e+00 0.0 1.8e+01 5.5e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 SFReduceEnd 4 1.0 9.2690e-05 7.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 407 1.0 4.4291e-04 1.5 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 407 1.0 8.0500e-03 1.8 1.37e+04 1.5 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4 KSPSetUp 7 1.0 9.4812e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 2.0799e-01 1.0 1.56e+08 1.1 1.7e+03 4.6e+03 9.6e+01 3 67 62 44 18 3 67 62 44 18 2185 KSPGMRESOrthog 20 1.0 1.7305e-03 1.7 2.39e+06 1.1 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 4059 PCSetUp_GAMG+ 1 1.0 3.5636e-01 1.0 7.29e+07 1.1 9.6e+02 9.2e+03 3.8e+02 6 32 36 50 70 6 32 36 50 72 601 PCGAMGCreateG 2 1.0 1.7694e-02 1.0 4.97e+04 1.0 1.3e+02 1.6e+03 5.0e+01 0 0 5 1 9 0 0 5 1 9 8 GAMG Coarsen 2 1.0 1.5848e-02 1.0 1.38e+05 1.0 2.9e+02 6.4e+02 1.0e+02 0 0 11 1 19 0 0 11 1 20 26 GAMG MIS/Agg 2 1.0 1.5397e-02 1.0 1.38e+05 1.0 2.9e+02 6.4e+02 1.0e+02 0 0 11 1 19 0 0 11 1 20 26 PCGAMGProl 2 1.0 7.2539e-03 1.0 0.00e+00 0.0 1.9e+02 2.1e+03 7.6e+01 0 0 7 2 14 0 0 7 2 14 0 GAMG Prol-col 2 1.0 2.1958e-03 1.0 0.00e+00 0.0 1.7e+02 8.1e+02 5.6e+01 0 0 6 1 10 0 0 6 1 11 0 GAMG Prol-lift 2 1.0 4.8924e-03 1.0 0.00e+00 0.0 2.4e+01 1.1e+04 1.2e+01 0 0 1 1 2 0 0 1 1 2 0 PCGAMGOptProl 2 1.0 7.8283e-02 1.0 2.07e+07 1.0 1.9e+02 8.4e+03 6.6e+01 1 9 7 9 12 1 9 7 9 13 775 GAMG smooth 2 1.0 3.1138e-02 1.0 6.98e+06 1.0 7.2e+01 1.4e+04 2.4e+01 1 3 3 6 4 1 3 3 6 5 656 PCGAMGCreateL 2 1.0 2.3671e-01 1.0 5.20e+07 1.1 1.5e+02 4.3e+04 8.1e+01 4 23 6 36 15 4 23 6 36 15 647 GAMG PtAP 2 1.0 2.3018e-01 1.0 5.20e+07 1.1 1.2e+02 5.0e+04 2.6e+01 4 23 4 34 5 4 23 4 34 5 665 GAMG Reduce 1 1.0 6.5261e-03 1.0 0.00e+00 0.0 2.9e+01 1.5e+04 5.5e+01 0 0 1 2 10 0 0 1 2 10 0 PCGAMG Gal l00 1 1.0 1.7859e-01 1.0 3.68e+07 1.1 6.0e+01 7.0e+04 1.3e+01 3 16 2 24 2 3 16 2 24 2 602 PCGAMG Opt l00 1 1.0 2.4156e-02 1.0 5.08e+06 1.0 3.6e+01 2.2e+04 1.1e+01 0 2 1 4 2 0 2 1 4 2 622 PCGAMG Gal l01 1 1.0 5.1648e-02 1.0 1.73e+07 1.4 6.0e+01 3.0e+04 1.3e+01 1 7 2 10 2 1 7 2 10 2 883 PCGAMG Opt l01 1 1.0 3.4516e-03 1.0 1.45e+06 1.3 3.6e+01 5.6e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 1113 PCSetUp 2 1.0 3.5986e-01 1.0 7.52e+07 1.0 9.6e+02 9.2e+03 3.8e+02 6 33 36 50 70 6 33 36 50 72 612 PCSetUpOnBlocks 24 1.0 3.8303e-03 37.2 5.91e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 1542 PCApply 24 1.0 1.7476e-01 1.1 1.34e+08 1.1 1.5e+03 4.3e+03 2.4e+01 3 58 57 37 4 3 58 57 37 5 2227 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 12 12 Matrix 108 108 Matrix Coarsen 2 2 Matrix Null Space 1 1 Index Set 75 75 IS L to G Mapping 6 6 Vector 187 187 Star Forest Graph 43 43 Krylov Solver 7 7 Preconditioner 7 7 Viewer 2 2 PetscRandom 2 2 Distributed Mesh 4 4 Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== Average time to get PetscTime(): 5.7e-08 Average time for MPI_Barrier(): 2.9866e-06 Average time for zero size MPI_Send(): 2.46033e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=i686-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/i386-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/i386-linux-gnu/hdf5/mpich -lhdf5 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/mpich/lib -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real --PETSC_ARCH=i386-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-08-22 21:13:53 on reproducible Machine characteristics: Linux-6.1.0-23-amd64-i686-with-glibc2.39 Using PETSc directory: /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib -lpetsc_real -L/usr/lib/i386-linux-gnu/hdf5/mpich -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/mpich/lib -L/usr/lib/gcc/i686-linux-gnu/14 -L/lib/i386-linux-gnu -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 4 unused database options. They are: Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: weak source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 2025-10-21 03:12:57.043 ( 6.423s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== elasticity strong scaling (3 processes with ndofs=30000) ==== Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 2025-10-21 03:12:57.295 ( 0.058s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks 2025-10-21 03:12:57.295 ( 0.058s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph 2025-10-21 03:12:57.295 ( 0.058s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2025-10-21 03:12:57.313 ( 0.076s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph 2025-10-21 03:12:57.318 ( 0.081s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:12:57.318 ( 0.081s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:12:57.318 ( 0.081s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 2025-10-21 03:12:57.319 ( 0.082s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 66332, non-local: 962) 2025-10-21 03:12:57.319 ( 0.082s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH 2025-10-21 03:13:01.895 ( 4.658s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2025-10-21 03:13:01.918 ( 4.681s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2025-10-21 03:13:01.991 ( 4.753s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2025-10-21 03:13:02.025 ( 4.787s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(120) 16819-1237 2025-10-21 03:13:02.026 ( 4.789s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) 2025-10-21 03:13:02.026 ( 4.789s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) 2025-10-21 03:13:02.031 ( 4.794s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2025-10-21 03:13:02.046 ( 4.809s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2025-10-21 03:13:02.086 ( 4.849s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices 2025-10-21 03:13:02.086 ( 4.849s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 2025-10-21 03:13:02.086 ( 4.849s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 2025-10-21 03:13:02.104 ( 4.866s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2025-10-21 03:13:02.110 ( 4.873s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2025-10-21 03:13:02.161 ( 4.924s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:02.174 ( 4.937s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:02.182 ( 4.945s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:02.198 ( 4.961s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:02.222 ( 4.985s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2025-10-21 03:13:02.222 ( 4.985s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2025-10-21 03:13:02.222 ( 4.985s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 UnitCube (24x19x19) to be refined 0 times 2025-10-21 03:13:02.227 ( 4.989s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:02.227 ( 4.989s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:02.227 ( 4.989s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 2025-10-21 03:13:02.227 ( 4.990s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2025-10-21 03:13:02.227 ( 4.990s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17320x4 2025-10-21 03:13:02.229 ( 4.992s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2025-10-21 03:13:02.229 ( 4.992s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2025-10-21 03:13:02.229 ( 4.992s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2025-10-21 03:13:02.229 ( 4.992s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:02.229 ( 4.992s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:02.230 ( 4.993s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 2025-10-21 03:13:02.234 ( 4.997s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:02.234 ( 4.997s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:02.250 ( 5.013s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:02.250 ( 5.013s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:02.251 ( 5.014s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2025-10-21 03:13:02.251 ( 5.014s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. 2025-10-21 03:13:02.252 ( 5.014s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2025-10-21 03:13:02.252 ( 5.015s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:17320x4 2025-10-21 03:13:02.254 ( 5.016s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2025-10-21 03:13:02.254 ( 5.016s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2025-10-21 03:13:02.254 ( 5.016s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2025-10-21 03:13:02.254 ( 5.017s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:02.254 ( 5.017s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:02.255 ( 5.017s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2025-10-21 03:13:02.255 ( 5.017s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2025-10-21 03:13:02.255 ( 5.017s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) 2025-10-21 03:13:02.273 ( 5.036s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 213 to 535 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 dolfinx hash: debian_1:0.8.0-11 ufl hash: ea06373d6123e47e4a3c75d92f167503ae508922 petsc version: Petsc Release Version 3.20.6, Mar 29, 2024 Problem type: elasticity Scaling type: strong Num processes: 3 Num cells: 51984 (52 thousand) Total degrees of freedom: 30000 (30 thousand) Average degrees of freedom per process: 10000 ---------------------------------------------------------------- 2025-10-21 03:13:02.377 ( 5.140s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: gamg type is MULTIPLICATIVE, levels=3 cycles=v Cycles per PCApply=1 Using externally compute Galerkin coarse grid matrices GAMG specific options Threshold for dropping small values in graph on each level = -1. -1. -1. Threshold scaling factor for each level not specified = 1. AGG specific options Number of levels of aggressive coarsening 1 MIS-k aggressive coarsening MIS-2 coarsening on aggressive levels Number smoothing steps 1 Complexity: grid = 1.0654 operator = 1.24982 Coarse grid solver -- level 0 ------------------------------- KSP Object: (mg_coarse_) 3 MPI processes type: preonly maximum iterations=10000, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_) 3 MPI processes type: bjacobi number of blocks = 3 Local solver information for first block is in the following KSP and PC objects on rank 0: Use -mg_coarse_ksp_view ::ascii_info_detail to display information for all blocks KSP Object: (mg_coarse_sub_) 1 MPI process type: preonly maximum iterations=1, initial guess is zero tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_coarse_sub_) 1 MPI process type: lu out-of-place factorization tolerance for zero pivot 2.22045e-14 using diagonal shift on blocks to prevent zero pivot [INBLOCKS] matrix ordering: nd factor fill ratio given 5., needed 1.0631 Factored matrix follows: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=174, cols=174, bs=6 package used to perform factorization: petsc total: nonzeros=27900, allocated nonzeros=27900 using I-node routines: found 45 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: (mg_coarse_sub_) 1 MPI process type: seqaij rows=174, cols=174, bs=6 total: nonzeros=26244, allocated nonzeros=26244 total number of mallocs used during MatSetValues calls=0 using I-node routines: found 56 nodes, limit used is 5 linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=174, cols=174, bs=6 total: nonzeros=26244, allocated nonzeros=26244 total number of mallocs used during MatSetValues calls=0 using I-node (on process 0) routines: found 56 nodes, limit used is 5 Down solver (pre-smoother) on level 1 ------------------------------- KSP Object: (mg_levels_1_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.312557, max 3.43813 eigenvalues provided (min 2.74808e-06, max 3.12557) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_1_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=1788, cols=1788, bs=6 total: nonzeros=286416, allocated nonzeros=286416 total number of mallocs used during MatSetValues calls=0 using scalable MatPtAP() implementation using I-node (on process 0) routines: found 170 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) Down solver (pre-smoother) on level 2 ------------------------------- KSP Object: (mg_levels_2_) 3 MPI processes type: chebyshev Chebyshev polynomial of first kind eigenvalue targets used: min 0.258682, max 2.8455 eigenvalues provided (min 0.0707087, max 2.58682) with transform: [0. 0.1; 0. 1.1] maximum iterations=2, nonzero initial guess tolerances: relative=1e-05, absolute=1e-50, divergence=10000. left preconditioning using NONE norm type for convergence test PC Object: (mg_levels_2_) 3 MPI processes type: jacobi type DIAGONAL linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3397 nodes, limit used is 5 Up solver (post-smoother) same as down solver (pre-smoother) linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=30000, cols=30000, bs=3 total: nonzeros=1251522, allocated nonzeros=1251522 total number of mallocs used during MatSetValues calls=0 has attached near null space using I-node (on process 0) routines: found 3397 nodes, limit used is 5 [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 4.940000 4.940000 Build dofmap data | 2 0.000000 0.000000 Build sparsity | 1 0.010000 0.010000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.020000 0.020000 Compute graph partition (SCOTCH) | 1 4.550000 4.550000 Compute local part of mesh dual graph | 2 0.030000 0.060000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.010000 0.010000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute AdjacencyList nodes to destination ranks | 1 0.130000 0.130000 Distribute row-wise data (scalable) | 1 0.020000 0.020000 GPS: create_level_structure | 2 0.000000 0.000000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 Init MPI | 1 0.060000 0.060000 Init PETSc | 1 0.000000 0.000000 Init dofmap from element dofmap | 2 0.000000 0.000000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 0.340000 0.340000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 4.550000 4.550000 SparsityPattern::finalize | 1 0.000000 0.000000 Topology: create | 1 0.190000 0.190000 Topology: determine shared index ownership | 1 0.050000 0.050000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble matrix | 1 0.080000 0.080000 ZZZ Assemble vector | 1 0.020000 0.020000 ZZZ Create Mesh | 1 4.940000 4.940000 ZZZ Create RHS function | 1 0.020000 0.020000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.020000 0.020000 ZZZ Create forms | 1 0.000000 0.000000 ZZZ Create near-nullspace | 1 0.000000 0.000000 ZZZ FunctionSpace | 1 0.000000 0.000000 ZZZ Solve | 1 0.340000 0.340000 *** Number of Krylov iterations: 23 *** Solution norm: 3.6795e-05 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processors, by pbuilder2 Tue Oct 21 03:13:02 2025 Using Petsc Release Version 3.20.6, Mar 29, 2024 Max Max/Min Avg Total Time (sec): 5.417e+00 1.000 5.417e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 2.276e+08 1.099 2.143e+08 6.429e+08 Flops/sec: 4.202e+07 1.099 3.956e+07 1.187e+08 MPI Msg Count: 9.150e+02 1.042 8.913e+02 2.674e+03 MPI Msg Len (bytes): 6.703e+06 1.486 6.180e+03 1.652e+07 MPI Reductions: 5.430e+02 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 5.4167e+00 100.0% 6.4291e+08 100.0% 2.674e+03 100.0% 6.180e+03 100.0% 5.250e+02 96.7% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 121 1.0 3.2589e-02 7.5 0.00e+00 0.0 2.2e+02 4.0e+00 1.2e+02 0 0 8 0 22 0 0 8 0 23 0 BuildTwoSidedF 86 1.0 3.2077e-02 7.5 0.00e+00 0.0 1.1e+02 3.4e+04 8.6e+01 0 0 4 23 16 0 0 4 23 16 0 MatMult 235 1.0 6.5641e-02 1.2 1.34e+08 1.1 1.4e+03 5.4e+03 0.0e+00 1 59 53 46 0 1 59 53 46 0 5782 MatMultAdd 48 1.0 4.7508e-03 1.1 1.08e+07 1.1 1.9e+02 1.3e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 6575 MatMultTranspose 48 1.0 9.6665e-03 1.6 1.08e+07 1.1 1.9e+02 1.3e+03 0.0e+00 0 5 7 1 0 0 5 7 1 0 3235 MatSolve 24 0.0 7.7029e-04 0.0 1.34e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1733 MatLUFactorSym 1 1.0 5.7021e-04 87.9 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatLUFactorNum 1 1.0 1.1324e-03 1000.4 2.60e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 2299 MatConvert 1 1.0 4.4963e-04 3.2 0.00e+00 0.0 1.2e+01 7.0e+02 1.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatScale 4 1.0 2.6182e-04 1.0 4.49e+05 1.1 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 4971 MatResidual 48 1.0 1.2634e-02 1.1 2.63e+07 1.1 2.9e+02 5.1e+03 0.0e+00 0 11 11 9 0 0 11 11 9 0 5843 MatAssemblyBegin 59 1.0 4.0886e-02 2.6 0.00e+00 0.0 1.1e+02 3.4e+04 3.0e+01 1 0 4 23 6 1 0 4 23 6 0 MatAssemblyEnd 59 1.0 2.1408e-02 1.0 8.81e+04 2.2 2.1e+02 3.8e+02 1.2e+02 0 0 8 0 22 0 0 8 0 23 8 MatGetRowIJ 1 0.0 2.1372e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCreateSubMat 2 1.0 2.2240e-03 1.0 0.00e+00 0.0 1.4e+01 1.5e+04 3.0e+01 0 0 1 1 6 0 0 1 1 6 0 MatGetOrdering 1 0.0 5.4963e-05 0.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatCoarsen 2 1.0 7.1697e-03 1.0 1.36e+05 1.0 2.8e+02 6.4e+02 1.0e+02 0 0 10 1 19 0 0 10 1 20 57 MatZeroEntries 3 1.0 2.7596e-04 4.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 6 1.5 2.9336e-03 1.7 0.00e+00 0.0 0.0e+00 0.0e+00 4.0e+00 0 0 0 0 1 0 0 0 0 1 0 MatAXPY 4 1.0 4.3581e-03 1.0 1.14e+05 1.0 2.4e+01 3.9e+02 1.4e+01 0 0 1 0 3 0 0 1 0 3 77 MatTranspose 10 1.0 4.1747e-03 1.1 0.00e+00 0.0 1.3e+02 1.6e+03 3.6e+01 0 0 5 1 7 0 0 5 1 7 0 MatMatMultSym 9 1.0 2.9337e-02 1.1 0.00e+00 0.0 7.5e+01 7.9e+03 3.0e+01 1 0 3 4 6 1 0 3 4 6 0 MatMatMultNum 3 1.0 5.8618e-03 1.0 6.59e+06 1.1 1.5e+01 2.5e+04 3.0e+00 0 3 1 2 1 0 3 1 2 1 3152 MatPtAPSymbolic 3 1.0 8.3435e-02 1.0 0.00e+00 0.0 9.9e+01 3.1e+04 2.1e+01 2 0 4 18 4 2 0 4 18 4 0 MatPtAPNumeric 3 1.0 1.0143e-01 1.0 5.13e+07 1.3 6.6e+01 3.5e+04 1.8e+01 2 21 2 14 3 2 21 2 14 3 1346 MatGetLocalMat 9 1.0 1.7283e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatGetBrAoCol 9 1.0 2.5879e-03 1.2 0.00e+00 0.0 1.1e+02 3.0e+04 0.0e+00 0 0 4 21 0 0 0 4 21 0 0 VecMDot 20 1.0 3.5918e-03 4.7 1.18e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 973 VecTDot 48 1.0 1.7161e-03 1.4 9.78e+05 1.0 0.0e+00 0.0e+00 4.8e+01 0 0 0 0 9 0 0 0 0 9 1678 VecNorm 46 1.0 5.8819e-03 5.7 7.25e+05 1.0 0.0e+00 0.0e+00 4.6e+01 0 0 0 0 8 0 0 0 0 9 364 VecScale 22 1.0 4.8373e-05 1.0 1.18e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 7229 VecCopy 148 1.0 2.1360e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 169 1.0 1.4615e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 48 1.0 3.9947e-04 1.1 9.59e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 7068 VecAYPX 310 1.0 1.4112e-03 1.1 2.50e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 5260 VecAXPBYCZ 96 1.0 9.1762e-04 1.1 2.57e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8314 VecMAXPY 22 1.0 5.0523e-04 1.0 1.39e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 8179 VecAssemblyBegin 57 1.0 6.3664e-04 2.4 0.00e+00 0.0 0.0e+00 0.0e+00 5.6e+01 0 0 0 0 10 0 0 0 0 11 0 VecAssemblyEnd 57 1.0 2.4829e-05 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecPointwiseMult 214 1.0 1.2997e-03 1.1 1.15e+06 1.0 0.0e+00 0.0e+00 0.0e+00 0 1 0 0 0 0 1 0 0 0 2617 VecScatterBegin 388 1.0 2.5929e-03 1.1 0.00e+00 0.0 2.0e+03 4.2e+03 0.0e+00 0 0 73 50 0 0 0 73 50 0 0 VecScatterEnd 388 1.0 8.8327e-03 5.6 1.21e+04 1.9 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 3 VecNormalize 22 1.0 5.4382e-04 1.3 3.53e+05 1.0 0.0e+00 0.0e+00 2.2e+01 0 0 0 0 4 0 0 0 0 4 1929 SFSetGraph 35 1.0 8.7845e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 35 1.0 1.0371e-03 1.2 0.00e+00 0.0 3.2e+02 3.6e+02 3.5e+01 0 0 12 1 6 0 0 12 1 7 0 SFBcastBegin 13 1.0 4.4558e-05 1.2 0.00e+00 0.0 7.8e+01 6.8e+02 0.0e+00 0 0 3 0 0 0 0 3 0 0 0 SFBcastEnd 13 1.0 2.9927e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFReduceBegin 4 1.0 5.0895e-05 1.1 0.00e+00 0.0 1.8e+01 5.3e+02 0.0e+00 0 0 1 0 0 0 0 1 0 0 0 SFReduceEnd 4 1.0 8.9530e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFPack 405 1.0 3.6073e-04 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 405 1.0 1.0210e-04 1.3 1.21e+04 1.9 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 299 KSPSetUp 7 1.0 8.6210e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 7.9505e-02 1.0 1.53e+08 1.1 1.7e+03 4.5e+03 9.6e+01 1 69 63 46 18 1 69 63 46 18 5544 KSPGMRESOrthog 20 1.0 4.0379e-03 3.3 2.35e+06 1.0 0.0e+00 0.0e+00 2.0e+01 0 1 0 0 4 0 1 0 0 4 1732 PCSetUp_GAMG+ 1 1.0 2.4694e-01 1.0 7.23e+07 1.2 9.4e+02 8.3e+03 3.8e+02 5 31 35 47 70 5 31 35 47 72 794 PCGAMGCreateG 2 1.0 1.1196e-02 1.0 5.01e+04 1.0 1.3e+02 1.5e+03 5.0e+01 0 0 5 1 9 0 0 5 1 10 13 GAMG Coarsen 2 1.0 7.6362e-03 1.0 1.36e+05 1.0 2.8e+02 6.4e+02 1.0e+02 0 0 10 1 19 0 0 10 1 20 53 GAMG MIS/Agg 2 1.0 7.1773e-03 1.0 1.36e+05 1.0 2.8e+02 6.4e+02 1.0e+02 0 0 10 1 19 0 0 10 1 20 57 PCGAMGProl 2 1.0 7.5348e-03 1.0 0.00e+00 0.0 1.9e+02 2.0e+03 7.6e+01 0 0 7 2 14 0 0 7 2 14 0 GAMG Prol-col 2 1.0 2.5129e-03 1.0 0.00e+00 0.0 1.7e+02 7.9e+02 5.6e+01 0 0 6 1 10 0 0 6 1 11 0 GAMG Prol-lift 2 1.0 4.8826e-03 1.0 0.00e+00 0.0 2.4e+01 1.1e+04 1.2e+01 0 0 1 2 2 0 0 1 2 2 0 PCGAMGOptProl 2 1.0 3.6892e-02 1.0 2.10e+07 1.1 1.9e+02 8.2e+03 6.6e+01 1 9 7 10 12 1 9 7 10 13 1612 GAMG smooth 2 1.0 2.6137e-02 1.0 7.10e+06 1.1 7.2e+01 1.3e+04 2.4e+01 0 3 3 6 4 0 3 3 6 5 763 PCGAMGCreateL 2 1.0 1.8319e-01 1.0 5.11e+07 1.3 1.5e+02 3.7e+04 8.1e+01 3 21 6 33 15 3 21 6 33 15 743 GAMG PtAP 2 1.0 1.8062e-01 1.0 5.11e+07 1.3 1.2e+02 4.4e+04 2.6e+01 3 21 4 32 5 3 21 4 32 5 754 GAMG Reduce 1 1.0 2.5861e-03 1.0 0.00e+00 0.0 2.9e+01 8.0e+03 5.5e+01 0 0 1 1 10 0 0 1 1 10 0 PCGAMG Gal l00 1 1.0 1.2896e-01 1.0 3.57e+07 1.1 6.0e+01 6.5e+04 1.3e+01 2 16 2 24 2 2 16 2 24 2 797 PCGAMG Opt l00 1 1.0 1.9276e-02 1.0 5.04e+06 1.0 3.6e+01 2.2e+04 1.1e+01 0 2 1 5 2 0 2 1 5 2 779 PCGAMG Gal l01 1 1.0 5.1688e-02 1.0 1.55e+07 2.1 6.0e+01 2.2e+04 1.3e+01 1 5 2 8 2 1 5 2 8 2 646 PCGAMG Opt l01 1 1.0 4.1971e-03 1.0 1.57e+06 1.8 3.6e+01 5.0e+03 1.1e+01 0 1 1 1 2 0 1 1 1 2 819 PCSetUp 2 1.0 2.4867e-01 1.0 7.23e+07 1.2 9.4e+02 8.3e+03 3.8e+02 5 31 35 47 70 5 31 35 47 72 799 PCSetUpOnBlocks 24 1.0 1.8149e-03 25.6 2.60e+06 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 1434 PCApply 24 1.0 6.9055e-02 1.1 1.32e+08 1.1 1.5e+03 4.2e+03 2.4e+01 1 58 57 39 4 1 58 57 39 5 5437 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 12 12 Matrix 108 108 Matrix Coarsen 2 2 Matrix Null Space 1 1 Index Set 75 75 IS L to G Mapping 6 6 Vector 187 187 Star Forest Graph 43 43 Krylov Solver 7 7 Preconditioner 7 7 Viewer 2 2 PetscRandom 2 2 Distributed Mesh 4 4 Discrete System 4 4 Weak Form 4 4 ======================================================================================================================== Average time to get PetscTime(): 5.71e-08 Average time for MPI_Barrier(): 2.744e-06 Average time for zero size MPI_Send(): 2.644e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=i686-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/i386-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/i386-linux-gnu/hdf5/mpich -lhdf5 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/mpich/lib -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real --PETSC_ARCH=i386-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-08-22 21:13:53 on reproducible Machine characteristics: Linux-6.1.0-23-amd64-i686-with-glibc2.39 Using PETSc directory: /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib -lpetsc_real -L/usr/lib/i386-linux-gnu/hdf5/mpich -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/mpich/lib -L/usr/lib/gcc/i686-linux-gnu/14 -L/lib/i386-linux-gnu -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type elasticity # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -matptap_via scalable # (source: command line) -mg_levels_esteig_ksp_type cg # (source: command line) -mg_levels_ksp_type chebyshev # (source: command line) -mg_levels_pc_type jacobi # (source: command line) -options_left # (source: command line) -pc_gamg_coarse_eq_limit 1000 # (source: command line) -pc_type gamg # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 4 unused database options. They are: Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: elasticity source: command line Option left: name:--scaling_type value: strong source: command line Option left: name:-mg_levels_esteig_ksp_type value: cg source: command line 2025-10-21 03:13:02.741 ( 5.504s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== poisson weak scaling (3 processes with ndofs=10000) ==== Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 2025-10-21 03:13:02.982 ( 0.180s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks 2025-10-21 03:13:02.983 ( 0.180s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph 2025-10-21 03:13:02.983 ( 0.180s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2025-10-21 03:13:03.029 ( 0.226s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph 2025-10-21 03:13:03.059 ( 0.257s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:03.060 ( 0.257s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:03.060 ( 0.257s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 2025-10-21 03:13:03.062 ( 0.259s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) 2025-10-21 03:13:03.062 ( 0.259s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH 2025-10-21 03:13:11.041 ( 8.238s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2025-10-21 03:13:11.062 ( 8.260s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2025-10-21 03:13:11.149 ( 8.347s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2025-10-21 03:13:11.237 ( 8.435s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(158) 5504-50030 2025-10-21 03:13:11.246 ( 8.443s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) 2025-10-21 03:13:11.250 ( 8.448s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) 2025-10-21 03:13:11.258 ( 8.456s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2025-10-21 03:13:11.274 ( 8.472s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2025-10-21 03:13:11.329 ( 8.526s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices 2025-10-21 03:13:11.329 ( 8.526s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 2025-10-21 03:13:11.329 ( 8.526s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 2025-10-21 03:13:11.333 ( 8.531s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2025-10-21 03:13:11.336 ( 8.533s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2025-10-21 03:13:11.347 ( 8.545s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:11.349 ( 8.546s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:11.349 ( 8.546s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:11.349 ( 8.546s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:11.354 ( 8.551s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2025-10-21 03:13:11.354 ( 8.551s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2025-10-21 03:13:11.354 ( 8.552s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 2025-10-21 03:13:11.355 ( 8.552s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:11.355 ( 8.552s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:11.355 ( 8.552s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 2025-10-21 03:13:11.355 ( 8.553s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2025-10-21 03:13:11.356 ( 8.553s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53556x4 UnitCube (30x30x30) to be refined 0 times 2025-10-21 03:13:11.365 ( 8.563s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2025-10-21 03:13:11.365 ( 8.563s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2025-10-21 03:13:11.365 ( 8.563s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2025-10-21 03:13:11.366 ( 8.563s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:11.366 ( 8.563s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:11.368 ( 8.565s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 2025-10-21 03:13:11.379 ( 8.576s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:11.385 ( 8.582s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:11.416 ( 8.613s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:11.416 ( 8.614s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:11.418 ( 8.615s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2025-10-21 03:13:11.418 ( 8.615s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. 2025-10-21 03:13:11.419 ( 8.617s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2025-10-21 03:13:11.419 ( 8.617s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53556x4 2025-10-21 03:13:11.424 ( 8.622s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2025-10-21 03:13:11.425 ( 8.622s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2025-10-21 03:13:11.425 ( 8.622s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2025-10-21 03:13:11.425 ( 8.622s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:11.425 ( 8.622s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:11.425 ( 8.623s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2025-10-21 03:13:11.426 ( 8.623s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2025-10-21 03:13:11.426 ( 8.623s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) 2025-10-21 03:13:11.484 ( 8.682s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2025-10-21 03:13:11.485 ( 8.682s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) 2025-10-21 03:13:11.507 ( 8.704s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 463 to 1267 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 dolfinx hash: debian_1:0.8.0-11 ufl hash: ea06373d6123e47e4a3c75d92f167503ae508922 petsc version: Petsc Release Version 3.20.6, Mar 29, 2024 Problem type: poisson Scaling type: weak Num processes: 3 Num cells: 162000 (162 thousand) Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- 2025-10-21 03:13:11.682 ( 8.880s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Maximum size of coarsest grid 9 Minimum size of coarsest grid 1 Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical SpGEMM type hypre linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=29791, cols=29791 total: nonzeros=424171, allocated nonzeros=424171 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 8.400000 8.400000 Build dofmap data | 2 0.005000 0.010000 Build sparsity | 1 0.010000 0.010000 Compute connectivity 2-0 | 1 0.010000 0.010000 Compute dof reordering map | 2 0.000000 0.000000 Compute entities of dim = 2 | 1 0.040000 0.040000 Compute graph partition (SCOTCH) | 1 7.960000 7.960000 Compute local part of mesh dual graph | 2 0.070000 0.140000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.030000 0.030000 Compute-local-to-global links for global/local adjacency list | 1 0.010000 0.010000 Distribute AdjacencyList nodes to destination ranks | 1 0.150000 0.150000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.000000 0.000000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 Init MPI | 1 0.130000 0.130000 Init PETSc | 1 0.060000 0.060000 Init dofmap from element dofmap | 2 0.005000 0.010000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 0.260000 0.260000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 7.960000 7.960000 SparsityPattern::finalize | 1 0.020000 0.020000 Topology: create | 1 0.200000 0.200000 Topology: determine shared index ownership | 1 0.160000 0.160000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.000000 0.000000 ZZZ Assemble | 1 0.160000 0.160000 ZZZ Assemble matrix | 1 0.050000 0.050000 ZZZ Assemble vector | 1 0.010000 0.010000 ZZZ Create Mesh | 1 8.410000 8.410000 ZZZ Create RHS function | 1 0.060000 0.060000 ZZZ Create boundary conditions | 1 0.010000 0.010000 ZZZ Create facets and facet->cell connectivity | 1 0.050000 0.050000 ZZZ FunctionSpace | 1 0.000000 0.000000 ZZZ Solve | 1 0.360000 0.360000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processors, by pbuilder2 Tue Oct 21 03:13:11 2025 Using Petsc Release Version 3.20.6, Mar 29, 2024 Max Max/Min Avg Total Time (sec): 8.978e+00 1.001 8.974e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 3.541e+06 1.024 3.489e+06 1.047e+07 Flops/sec: 3.948e+05 1.025 3.888e+05 1.166e+06 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 MPI Msg Len (bytes): 1.881e+05 1.187 5.866e+03 5.280e+05 MPI Reductions: 7.000e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 8.9736e+00 100.0% 1.0467e+07 100.0% 9.000e+01 100.0% 5.866e+03 100.0% 5.200e+01 74.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 5 1.0 4.9065e-02 1.8 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 10 0 BuildTwoSidedF 2 1.0 1.9972e-02 182.0 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatMult 7 1.0 1.5183e-03 1.0 1.94e+06 1.0 4.2e+01 5.6e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 3774 MatConvert 1 1.0 4.4770e-02 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 MatAssemblyBegin 5 1.0 2.1210e-02 12.1 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatAssemblyEnd 5 1.0 1.0551e-02 1.7 3.70e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 10 1 MatGetRowIJ 4 1.0 3.9150e-06 2.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 4.7355e-04 12.1 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 MatSetPreallCOO 2 1.0 3.4647e-03 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatSetValuesCOO 2 1.0 6.4283e-04 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecTDot 16 1.0 5.5408e-04 1.2 3.22e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 23 0 9 0 0 31 1720 VecNorm 8 1.0 4.3461e-04 1.6 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 1097 VecCopy 2 1.0 1.9089e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 9 1.0 3.4652e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 1.1914e-04 1.0 2.82e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 7001 VecAYPX 6 1.0 6.9414e-05 1.2 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 5150 VecScatterBegin 7 1.0 1.2136e-04 1.1 0.00e+00 0.0 4.2e+01 5.6e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 VecScatterEnd 7 1.0 3.7838e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 2.4957e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 3.6051e-02 1.1 0.00e+00 0.0 3.6e+01 8.2e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 SFPack 7 1.0 1.7135e-05 1.3 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 7 1.0 2.1940e-06 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSetUp 1 1.0 3.4652e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 8.1465e-02 1.0 2.83e+06 1.0 4.2e+01 5.6e+03 2.4e+01 1 80 47 45 34 1 80 47 45 46 103 PCSetUp 1 1.0 1.7873e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 2 0 0 0 3 2 0 0 0 4 0 PCApply 8 1.0 7.8886e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 2 2 Matrix 7 7 Index Set 6 6 IS L to G Mapping 3 3 Vector 12 12 Star Forest Graph 3 3 Krylov Solver 1 1 Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== Average time to get PetscTime(): 5.51e-08 Average time for MPI_Barrier(): 2.22214e-05 Average time for zero size MPI_Send(): 2.721e-06 #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=i686-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/i386-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/i386-linux-gnu/hdf5/mpich -lhdf5 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/mpich/lib -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real --PETSC_ARCH=i386-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-08-22 21:13:53 on reproducible Machine characteristics: Linux-6.1.0-23-amd64-i686-with-glibc2.39 Using PETSc directory: /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib -lpetsc_real -L/usr/lib/i386-linux-gnu/hdf5/mpich -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/mpich/lib -L/usr/lib/gcc/i686-linux-gnu/14 -L/lib/i386-linux-gnu -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 10000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type weak # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 10000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: weak source: command line 2025-10-21 03:13:11.955 ( 9.153s) [RANK: 0 ] loguru.cpp:526 INFO| atexit ==== poisson strong scaling (3 processes with ndofs=30000) ==== Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 Warning: program compiled against libxml 212 using older 209 2025-10-21 03:13:12.087 ( 0.076s) [RANK: 0 ] utils.cpp:94 INFO| Compute partition of cells across ranks 2025-10-21 03:13:12.087 ( 0.076s) [RANK: 0 ] graphbuild.cpp:491 INFO| Building mesh dual graph 2025-10-21 03:13:12.087 ( 0.076s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2025-10-21 03:13:12.139 ( 0.128s) [RANK: 0 ] graphbuild.cpp:51 INFO| Build nonlocal part of mesh dual graph 2025-10-21 03:13:12.142 ( 0.131s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:12.142 ( 0.131s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:12.143 ( 0.131s) [RANK: 0 ] graphbuild.cpp:165 INFO| Number of destination and source ranks in non-local dual graph construction, and ratio to total number of ranks: 2, 2, 0.666667, 0.666667 2025-10-21 03:13:12.144 ( 0.133s) [RANK: 0 ] graphbuild.cpp:503 INFO| Graph edges (local: 210000, non-local: 1800) 2025-10-21 03:13:12.144 ( 0.133s) [RANK: 0 ] partitioners.cpp:315 INFO| Compute graph partition using PT-SCOTCH 2025-10-21 03:13:20.092 ( 8.081s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2025-10-21 03:13:20.122 ( 8.111s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2025-10-21 03:13:20.265 ( 8.253s) [RANK: 0 ] graphbuild.cpp:356 INFO| Build local part of mesh dual graph 2025-10-21 03:13:20.325 ( 8.314s) [RANK: 0 ] ordering.cpp:204 INFO| GPS pseudo-diameter:(178) 51517-1780 2025-10-21 03:13:20.330 ( 8.319s) [RANK: 0 ] Topology.cpp:1330 INFO| Create topology (single cell type) 2025-10-21 03:13:20.330 ( 8.319s) [RANK: 0 ] Topology.cpp:1044 INFO| Create topology (generalised) 2025-10-21 03:13:20.337 ( 8.325s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 3 2025-10-21 03:13:20.337 ( 8.326s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 3 2025-10-21 03:13:20.352 ( 8.340s) [RANK: 0 ] partition.cpp:233 INFO| Compute ghost indices 2025-10-21 03:13:20.352 ( 8.341s) [RANK: 0 ] MPI.cpp:97 INFO| Computing communication graph edges (using PCX algorithm). Number of input edges: 0 2025-10-21 03:13:20.352 ( 8.341s) [RANK: 0 ] MPI.cpp:154 INFO| Finished graph edge discovery using PCX algorithm. Number of discovered edges 0 2025-10-21 03:13:20.356 ( 8.345s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2025-10-21 03:13:20.357 ( 8.345s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2025-10-21 03:13:20.368 ( 8.357s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:20.373 ( 8.362s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:20.373 ( 8.362s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:20.373 ( 8.362s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:20.376 ( 8.365s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 0 2025-10-21 03:13:20.376 ( 8.365s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 0 2025-10-21 03:13:20.376 ( 8.365s) [RANK: 0 ] MPI.h:377 INFO| Number of neighbourhood source ranks in distribute_to_postoffice: 0 2025-10-21 03:13:20.377 ( 8.365s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:20.377 ( 8.366s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:20.377 ( 8.366s) [RANK: 0 ] MPI.h:518 INFO| Neighbourhood destination ranks from post office in distribute_data (rank, num dests, num dests/mpi_size): 0, 2, 0.666667 2025-10-21 03:13:20.378 ( 8.366s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2025-10-21 03:13:20.378 ( 8.366s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53192x4 2025-10-21 03:13:20.383 ( 8.372s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2025-10-21 03:13:20.383 ( 8.372s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2025-10-21 03:13:20.384 ( 8.372s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2025-10-21 03:13:20.384 ( 8.373s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:20.384 ( 8.373s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 UnitCube (30x30x30) to be refined 0 times 2025-10-21 03:13:20.387 ( 8.376s) [RANK: 0 ]topologycomputation.cpp:748 INFO| Computing mesh entities of dimension 2 2025-10-21 03:13:20.397 ( 8.386s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:20.402 ( 8.390s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:20.437 ( 8.426s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:20.437 ( 8.426s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:20.439 ( 8.428s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2025-10-21 03:13:20.439 ( 8.428s) [RANK: 0 ]topologycomputation.cpp:870 INFO| Computing mesh connectivity 2 - 3 from transpose. 2025-10-21 03:13:20.440 ( 8.429s) [RANK: 0 ] dofmapbuilder.cpp:166 INFO| Checking required entities per dimension 2025-10-21 03:13:20.441 ( 8.429s) [RANK: 0 ] dofmapbuilder.cpp:264 INFO| Cell type:0, dofmap:53192x4 2025-10-21 03:13:20.446 ( 8.435s) [RANK: 0 ] dofmapbuilder.cpp:320 INFO| Global index computation 2025-10-21 03:13:20.446 ( 8.435s) [RANK: 0 ] dofmapbuilder.cpp:637 INFO| Got 1 index_maps 2025-10-21 03:13:20.446 ( 8.435s) [RANK: 0 ] dofmapbuilder.cpp:644 INFO| Get global indices 2025-10-21 03:13:20.450 ( 8.439s) [RANK: 0 ] MPI.cpp:164 INFO| Computing communication graph edges (using NBX algorithm). Number of input edges: 2 2025-10-21 03:13:20.450 ( 8.439s) [RANK: 0 ] MPI.cpp:235 INFO| Finished graph edge discovery using NBX algorithm. Number of discovered edges 2 2025-10-21 03:13:20.451 ( 8.439s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2025-10-21 03:13:20.451 ( 8.440s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (0,0) 2025-10-21 03:13:20.451 ( 8.440s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (0,0) 2025-10-21 03:13:20.504 ( 8.493s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (2,0) - (3,0) 2025-10-21 03:13:20.504 ( 8.493s) [RANK: 0 ]topologycomputation.cpp:799 INFO| Requesting connectivity (3,0) - (2,0) 2025-10-21 03:13:20.531 ( 8.519s) [RANK: 0 ] SparsityPattern.cpp:385 INFO| Column ghost size increased from 484 to 1283 ---------------------------------------------------------------- Test problem summary dolfinx version: 0.8.0 dolfinx hash: debian_1:0.8.0-11 ufl hash: ea06373d6123e47e4a3c75d92f167503ae508922 petsc version: Petsc Release Version 3.20.6, Mar 29, 2024 Problem type: poisson Scaling type: strong Num processes: 3 Num cells: 162000 (162 thousand) Total degrees of freedom: 29791 (29.8 thousand) Average degrees of freedom per process: 9930 ---------------------------------------------------------------- 2025-10-21 03:13:20.590 ( 8.579s) [RANK: 0 ] petsc.cpp:700 INFO| PETSc Krylov solver starting to solve system. KSP Object: 3 MPI processes type: cg maximum iterations=10000, initial guess is zero tolerances: relative=1e-08, absolute=1e-50, divergence=10000. left preconditioning using PRECONDITIONED norm type for convergence test PC Object: 3 MPI processes type: hypre HYPRE BoomerAMG preconditioning Cycle type V Maximum number of levels 25 Maximum number of iterations PER hypre call 1 Convergence tolerance PER hypre call 0. Threshold for strong coupling 0.5 Interpolation truncation factor 0. Interpolation: max elements per row 0 Number of levels of aggressive coarsening 0 Number of paths for aggressive coarsening 1 Maximum row sums 0.9 Sweeps down 1 Sweeps up 1 Sweeps on coarse 1 Relax down symmetric-SOR/Jacobi Relax up symmetric-SOR/Jacobi Relax on coarse Gaussian-elimination Relax weight (all) 1. Outer relax weight (all) 1. Maximum size of coarsest grid 9 Minimum size of coarsest grid 1 Using CF-relaxation Not using more complex smoothers. Measure type local Coarsen type Falgout Interpolation type classical SpGEMM type hypre linear system matrix = precond matrix: Mat Object: 3 MPI processes type: mpiaij rows=29791, cols=29791 total: nonzeros=424171, allocated nonzeros=424171 total number of mallocs used during MatSetValues calls=0 not using I-node (on process 0) routines [MPI_MAX] Summary of timings | reps wall avg wall tot ------------------------------------------------------------------------------------------------------- Build BoxMesh (tetrahedra) | 1 8.310000 8.310000 Build dofmap data | 2 0.010000 0.020000 Build sparsity | 1 0.020000 0.020000 Compute connectivity 2-0 | 1 0.000000 0.000000 Compute dof reordering map | 2 0.005000 0.010000 Compute entities of dim = 2 | 1 0.050000 0.050000 Compute graph partition (SCOTCH) | 1 7.930000 7.930000 Compute local part of mesh dual graph | 2 0.060000 0.120000 Compute local-to-local map | 1 0.000000 0.000000 Compute non-local part of mesh dual graph | 1 0.010000 0.010000 Compute-local-to-global links for global/local adjacency list | 1 0.000000 0.000000 Distribute AdjacencyList nodes to destination ranks | 1 0.200000 0.200000 Distribute row-wise data (scalable) | 1 0.000000 0.000000 GPS: create_level_structure | 2 0.000000 0.000000 Gibbs-Poole-Stockmeyer ordering | 1 0.010000 0.010000 Init MPI | 1 0.070000 0.070000 Init PETSc | 1 0.000000 0.000000 Init dofmap from element dofmap | 2 0.010000 0.020000 Init logging | 1 0.000000 0.000000 PETSc Krylov solver | 1 0.190000 0.190000 SCOTCH: call SCOTCH_dgraphBuild | 1 0.000000 0.000000 SCOTCH: call SCOTCH_dgraphPart | 1 7.930000 7.930000 SparsityPattern::finalize | 1 0.010000 0.010000 Topology: create | 1 0.080000 0.080000 Topology: determine shared index ownership | 1 0.030000 0.030000 Topology: determine vertex ownership groups (owned, undetermined, unowned) | 1 0.010000 0.010000 ZZZ Assemble | 1 0.140000 0.140000 ZZZ Assemble matrix | 1 0.050000 0.050000 ZZZ Assemble vector | 1 0.010000 0.010000 ZZZ Create Mesh | 1 8.310000 8.310000 ZZZ Create RHS function | 1 0.060000 0.060000 ZZZ Create boundary conditions | 1 0.000000 0.000000 ZZZ Create facets and facet->cell connectivity | 1 0.050000 0.050000 ZZZ FunctionSpace | 1 0.010000 0.010000 ZZZ Solve | 1 0.190000 0.190000 *** Number of Krylov iterations: 7 *** Solution norm: 36.6791 **************************************************************************************************************************************************************** *** WIDEN YOUR WINDOW TO 160 CHARACTERS. Use 'enscript -r -fCourier9' to print this document *** **************************************************************************************************************************************************************** ------------------------------------------------------------------ PETSc Performance Summary: ------------------------------------------------------------------ /build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu/dolfinx-scaling-test on a named i-capture-the-hostname with 3 processors, by pbuilder2 Tue Oct 21 03:13:20 2025 Using Petsc Release Version 3.20.6, Mar 29, 2024 Max Max/Min Avg Total Time (sec): 8.700e+00 1.000 8.700e+00 Objects: 0.000e+00 0.000 0.000e+00 Flops: 3.549e+06 1.029 3.489e+06 1.047e+07 Flops/sec: 4.079e+05 1.029 4.010e+05 1.203e+06 MPI Msg Count: 3.000e+01 1.000 3.000e+01 9.000e+01 MPI Msg Len (bytes): 1.906e+05 1.195 5.916e+03 5.325e+05 MPI Reductions: 7.000e+01 1.000 Flop counting convention: 1 flop = 1 real number operation of type (multiply/divide/add/subtract) e.g., VecAXPY() for real vectors of length N --> 2N flops and VecAXPY() for complex vectors of length N --> 8N flops Summary of Stages: ----- Time ------ ----- Flop ------ --- Messages --- -- Message Lengths -- -- Reductions -- Avg %Total Avg %Total Count %Total Avg %Total Count %Total 0: Main Stage: 8.7002e+00 100.0% 1.0466e+07 100.0% 9.000e+01 100.0% 5.916e+03 100.0% 5.200e+01 74.3% ------------------------------------------------------------------------------------------------------------------------ See the 'Profiling' chapter of the users' manual for details on interpreting output. Phase summary info: Count: number of times phase was executed Time and Flop: Max - maximum over all processors Ratio - ratio of maximum to minimum over all processors Mess: number of messages sent AvgLen: average message length (bytes) Reduct: number of global reductions Global: entire computation Stage: stages of a computation. Set stages with PetscLogStagePush() and PetscLogStagePop(). %T - percent time in this phase %F - percent flop in this phase %M - percent messages in this phase %L - percent message lengths in this phase %R - percent reductions in this phase Total Mflop/s: 10e-6 * (sum of flop over all processors)/(max time over all processors) ------------------------------------------------------------------------------------------------------------------------ Event Count Time (sec) Flop --- Global --- --- Stage ---- Total Max Ratio Max Ratio Max Ratio Mess AvgLen Reduct %T %F %M %L %R %T %F %M %L %R Mflop/s ------------------------------------------------------------------------------------------------------------------------ --- Event Stage 0: Main Stage BuildTwoSided 5 1.0 6.3655e-03 119.2 0.00e+00 0.0 2.4e+01 4.0e+00 5.0e+00 0 0 27 0 7 0 0 27 0 10 0 BuildTwoSidedF 2 1.0 6.3843e-03 79.5 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatMult 7 1.0 1.5091e-03 1.1 1.94e+06 1.0 4.2e+01 5.7e+03 0.0e+00 0 55 47 45 0 0 55 47 45 0 3797 MatConvert 1 1.0 5.5215e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 0 0 0 0 3 0 0 0 0 4 0 MatAssemblyBegin 5 1.0 7.7179e-03 4.8 0.00e+00 0.0 1.2e+01 2.2e+04 2.0e+00 0 0 13 50 3 0 0 13 50 4 0 MatAssemblyEnd 5 1.0 6.7392e-03 1.0 3.75e+03 1.2 1.2e+01 1.4e+03 5.0e+00 0 0 13 3 7 0 0 13 3 10 2 MatGetRowIJ 4 1.0 1.4030e-06 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatView 1 1.0 1.0040e-03 17.7 0.00e+00 0.0 0.0e+00 0.0e+00 1.0e+00 0 0 0 0 1 0 0 0 0 2 0 MatSetPreallCOO 2 1.0 3.3447e-03 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 MatSetValuesCOO 2 1.0 5.7194e-04 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecTDot 16 1.0 5.2977e-04 1.2 3.22e+05 1.0 0.0e+00 0.0e+00 1.6e+01 0 9 0 0 23 0 9 0 0 31 1799 VecNorm 8 1.0 4.5073e-04 1.8 1.61e+05 1.0 0.0e+00 0.0e+00 8.0e+00 0 5 0 0 11 0 5 0 0 15 1057 VecCopy 2 1.0 1.8628e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecSet 9 1.0 2.9223e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 VecAXPY 14 1.0 1.1694e-04 1.0 2.82e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 8 0 0 0 0 8 0 0 0 7133 VecAYPX 6 1.0 6.1382e-05 1.1 1.21e+05 1.0 0.0e+00 0.0e+00 0.0e+00 0 3 0 0 0 0 3 0 0 0 5824 VecScatterBegin 7 1.0 1.2544e-04 1.1 0.00e+00 0.0 4.2e+01 5.7e+03 0.0e+00 0 0 47 45 0 0 0 47 45 0 0 VecScatterEnd 7 1.0 3.5192e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetGraph 3 1.0 2.3324e-05 1.1 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFSetUp 3 1.0 9.8949e-05 1.1 0.00e+00 0.0 3.6e+01 8.2e+02 3.0e+00 0 0 40 6 4 0 0 40 6 6 0 SFPack 7 1.0 2.0340e-05 1.4 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 SFUnpack 7 1.0 1.8830e-06 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSetUp 1 1.0 2.2393e-05 1.2 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 0 0 0 0 0 0 0 0 0 0 0 KSPSolve 1 1.0 7.5336e-02 1.0 2.83e+06 1.0 4.2e+01 5.7e+03 2.4e+01 1 80 47 45 34 1 80 47 45 46 111 PCSetUp 1 1.0 1.1576e-01 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 2.0e+00 1 0 0 0 3 1 0 0 0 4 0 PCApply 8 1.0 7.2806e-02 1.0 0.00e+00 0.0 0.0e+00 0.0e+00 0.0e+00 1 0 0 0 0 1 0 0 0 0 0 ------------------------------------------------------------------------------------------------------------------------ Object Type Creations Destructions. Reports information only for process 0. --- Event Stage 0: Main Stage Container 2 2 Matrix 7 7 Index Set 6 6 IS L to G Mapping 3 3 Vector 12 12 Star Forest Graph 3 3 Krylov Solver 1 1 Preconditioner 1 1 Viewer 1 1 ======================================================================================================================== Average time to get PetscTime(): 5.71e-08 Average time for MPI_Barrier(): 2.3736e-06 Average time for zero size MPI_Send(): 2.57367e-06 #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries Compiled without FORTRAN kernels Compiled with full precision matrices (default) sizeof(short) 2 sizeof(int) 4 sizeof(long) 4 sizeof(void*) 4 sizeof(PetscScalar) 8 sizeof(PetscInt) 4 Configure options: --build=i686-linux-gnu --prefix=/usr --includedir=${prefix}/include --mandir=${prefix}/share/man --infodir=${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --with-option-checking=0 --with-silent-rules=0 --libdir=${prefix}/lib/i386-linux-gnu --runstatedir=/run --with-maintainer-mode=0 --with-dependency-tracking=0 --with-debugging=0 --shared-library-extension=_real --with-shared-libraries --with-pic=1 --with-cc=mpicc --with-cxx=mpicxx --with-fc=mpif90 --with-cxx-dialect=C++11 --with-opencl=1 --with-blas-lib=-lblas --with-lapack-lib=-llapack --with-scalapack=1 --with-scalapack-lib=-lscalapack-mpich --with-fftw=1 --with-fftw-include="[]" --with-fftw-lib="-lfftw3 -lfftw3_mpi" --with-yaml=1 --with-hdf5-include=/usr/include/hdf5/mpich --with-hdf5-lib="-L/usr/lib/i386-linux-gnu/hdf5/mpich -lhdf5 -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/mpich/lib -lmpich -lpthread -lhwloc " --CXX_LINKER_FLAGS=-Wl,--no-as-needed --with-ptscotch=1 --with-ptscotch-include=/usr/include/scotch --with-ptscotch-lib="-lptesmumps -lptscotch -lptscotcherr" --with-hypre=1 --with-hypre-include=/usr/include/hypre --with-hypre-lib=-lHYPRE --with-mumps=1 --with-mumps-include="[]" --with-mumps-lib="-ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord" --with-suitesparse=1 --with-suitesparse-include=/usr/include/suitesparse --with-suitesparse-lib="-lspqr -lumfpack -lamd -lcholmod -lklu" --with-superlu=1 --with-superlu-include=/usr/include/superlu --with-superlu-lib=-lsuperlu --with-superlu_dist=1 --with-superlu_dist-include=/usr/include/superlu-dist --with-superlu_dist-lib=-lsuperlu_dist --prefix=/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real --PETSC_ARCH=i386-linux-gnu-real CFLAGS="-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC" FCFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" FFLAGS="-g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro -fPIC" MAKEFLAGS=w ----------------------------------------- Libraries compiled on 2024-08-22 21:13:53 on reproducible Machine characteristics: Linux-6.1.0-23-amd64-i686-with-glibc2.39 Using PETSc directory: /usr/lib/petscdir/petsc3.20/i386-linux-gnu-real Using PETSc arch: ----------------------------------------- Using C compiler: mpicc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -Wdate-time -D_FORTIFY_SOURCE=2 Using Fortran compiler: mpif90 -g -O2 -ffile-prefix-map=/build/reproducible-path/petsc-3.20.6+dfsg1=. -fstack-protector-strong -fPIC -ffree-line-length-0 -Wdate-time -D_FORTIFY_SOURCE=2 ----------------------------------------- Using include paths: -I/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/include -I/usr/include/hypre -I/usr/include/suitesparse -I/usr/include/superlu -I/usr/include/superlu-dist -I/usr/include/scotch -I/usr/include/hdf5/mpich ----------------------------------------- Using C linker: mpicc Using Fortran linker: mpif90 Using libraries: -L/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib -L/usr/lib/petscdir/petsc3.20/i386-linux-gnu-real/lib -lpetsc_real -L/usr/lib/i386-linux-gnu/hdf5/mpich -Wl,-z,relro -Wl,-z,now -L/usr/lib/i386-linux-gnu/mpich/lib -L/usr/lib/gcc/i686-linux-gnu/14 -L/lib/i386-linux-gnu -lHYPRE -lspqr -lumfpack -lamd -lcholmod -lklu -ldmumps -lzmumps -lsmumps -lcmumps -lmumps_common -lpord -lscalapack-mpich -lsuperlu -lsuperlu_dist -lfftw3 -lfftw3_mpi -llapack -lblas -lptesmumps -lptscotch -lptscotcherr -lhdf5 -lmpich -lpthread -lhwloc -lm -lOpenCL -lyaml -lX11 -lmpichfort -lmpich -lgfortran -lm -lgfortran -lm -lgcc_s -lquadmath -lstdc++ ----------------------------------------- #PETSc Option Table entries: --ndofs 30000 # (source: command line) --problem_type poisson # (source: command line) --scaling_type strong # (source: command line) -ksp_rtol 1.0e-8 # (source: command line) -ksp_type cg # (source: command line) -ksp_view # (source: command line) -log_view # (source: command line) -options_left # (source: command line) -pc_hypre_boomeramg_strong_threshold 0.5 # (source: command line) -pc_hypre_type boomeramg # (source: command line) -pc_type hypre # (source: command line) #End of PETSc Option Table entries WARNING! There are options you set that were not used! WARNING! could be spelling mistake, etc! There are 3 unused database options. They are: Option left: name:--ndofs value: 30000 source: command line Option left: name:--problem_type value: poisson source: command line Option left: name:--scaling_type value: strong source: command line 2025-10-21 03:13:20.795 ( 8.784s) [RANK: 0 ] loguru.cpp:526 INFO| atexit make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake -O--sourcedirectory=src dh_prep -O--buildsystem=cmake -O--sourcedirectory=src dh_auto_install -O--buildsystem=cmake -O--sourcedirectory=src cd obj-i686-linux-gnu && make -j5 install DESTDIR=/build/reproducible-path/fenicsx-performance-tests-0.8.0/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/fenicsx-performance-tests-0.8.0/src -B/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/fenicsx-performance-tests-0.8.0/debian/tmp/usr/bin/dolfinx-scaling-test make[1]: Leaving directory '/build/reproducible-path/fenicsx-performance-tests-0.8.0/obj-i686-linux-gnu' dh_install -O--buildsystem=cmake -O--sourcedirectory=src dh_installdocs -O--buildsystem=cmake -O--sourcedirectory=src dh_installchangelogs -O--buildsystem=cmake -O--sourcedirectory=src dh_installman -O--buildsystem=cmake -O--sourcedirectory=src dh_installsystemduser -O--buildsystem=cmake -O--sourcedirectory=src dh_perl -O--buildsystem=cmake -O--sourcedirectory=src dh_link -O--buildsystem=cmake -O--sourcedirectory=src dh_strip_nondeterminism -O--buildsystem=cmake -O--sourcedirectory=src dh_compress -O--buildsystem=cmake -O--sourcedirectory=src dh_fixperms -O--buildsystem=cmake -O--sourcedirectory=src dh_missing -O--buildsystem=cmake -O--sourcedirectory=src dh_dwz -a -O--buildsystem=cmake -O--sourcedirectory=src dh_strip -a -O--buildsystem=cmake -O--sourcedirectory=src dh_makeshlibs -a -O--buildsystem=cmake -O--sourcedirectory=src dh_shlibdeps -a -O--buildsystem=cmake -O--sourcedirectory=src dh_installdeb -O--buildsystem=cmake -O--sourcedirectory=src dh_gencontrol -O--buildsystem=cmake -O--sourcedirectory=src dh_md5sums -O--buildsystem=cmake -O--sourcedirectory=src dh_builddeb -O--buildsystem=cmake -O--sourcedirectory=src dpkg-deb: building package 'fenicsx-performance-tests' in '../fenicsx-performance-tests_0.8.0-1_i386.deb'. dpkg-deb: building package 'fenicsx-performance-tests-source' in '../fenicsx-performance-tests-source_0.8.0-1_all.deb'. dpkg-deb: building package 'fenicsx-performance-tests-dbgsym' in '../fenicsx-performance-tests-dbgsym_0.8.0-1_i386.deb'. dpkg-genbuildinfo --build=binary -O../fenicsx-performance-tests_0.8.0-1_i386.buildinfo dpkg-genchanges --build=binary -O../fenicsx-performance-tests_0.8.0-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/5841/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/5841/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/5841 and its subdirectories I: Current time: Tue Oct 21 03:13:31 +14 2025 I: pbuilder-time-stamp: 1760966011