I: pbuilder: network access will be disabled during build I: Current time: Wed May 8 01:25:12 +14 2024 I: pbuilder-time-stamp: 1715081112 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [dipy_1.8.0-2.dsc] I: copying [./dipy_1.8.0.orig.tar.gz] I: copying [./dipy_1.8.0-2.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Jan 15 21:34:59 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dipy_1.8.0-2.dsc: no acceptable signature found dpkg-source: info: extracting dipy in dipy-1.8.0 dpkg-source: info: unpacking dipy_1.8.0.orig.tar.gz dpkg-source: info: unpacking dipy_1.8.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying deb_no_sources_for_docs dpkg-source: info: applying skip-tests-needing-internet.patch dpkg-source: info: applying fix-i386.patch dpkg-source: info: applying skip_wall-clock_test.patch dpkg-source: info: applying no-network.patch dpkg-source: info: applying skip-stringent-test.patch dpkg-source: info: applying skip-streamwarp-test-in-big-endian.patch dpkg-source: info: applying relay_comparison.patch dpkg-source: info: applying sphinx-default.patch dpkg-source: info: applying fix-privacy-breaches.patch dpkg-source: info: applying fix-endianness.patch dpkg-source: info: applying clear-cython.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/43414/tmp/hooks/D01_modify_environment starting debug: Running on ionos12-i386. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 May 7 11:25 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/43414/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/43414/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="i686-pc-linux-gnu") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=i386 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=i686 HOST_ARCH=i386 IFS=' ' INVOCATION_ID=7251806b0c464b5aa302089c943749c7 LANG=C LANGUAGE=de_CH:de LC_ALL=C LD_LIBRARY_PATH=/usr/lib/libeatmydata LD_PRELOAD=libeatmydata.so MACHTYPE=i686-pc-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=43414 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.KjmiZSbN/pbuilderrc_wR9B --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.KjmiZSbN/b2 --logfile b2/build.log dipy_1.8.0-2.dsc' SUDO_GID=112 SUDO_UID=107 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://46.16.76.132:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 3 08:39 /bin -> usr/bin I: user script /srv/workspace/pbuilder/43414/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, libgomp1, cython3, python-is-python3, python3-all-dev, python3-setuptools, python3-mesonpy, python3-numpy, python3-scipy, python3-h5py, python3-matplotlib, python3-nibabel, python3-pil.imagetk, python3-pytest, python3-pandas, python3-tables, python3-tk, python3-trx-python, python3-sklearn, python3-tqdm, xvfb, xauth, python3-sphinx, python3-numpydoc, python3-skimage, python3-sphinx-design dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19683 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python-is-python3; however: Package python-is-python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-mesonpy; however: Package python3-mesonpy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-nibabel; however: Package python3-nibabel is not installed. pbuilder-satisfydepends-dummy depends on python3-pil.imagetk; however: Package python3-pil.imagetk is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-tables; however: Package python3-tables is not installed. pbuilder-satisfydepends-dummy depends on python3-tk; however: Package python3-tk is not installed. pbuilder-satisfydepends-dummy depends on python3-trx-python; however: Package python3-trx-python is not installed. pbuilder-satisfydepends-dummy depends on python3-sklearn; however: Package python3-sklearn is not installed. pbuilder-satisfydepends-dummy depends on python3-tqdm; however: Package python3-tqdm is not installed. pbuilder-satisfydepends-dummy depends on xvfb; however: Package xvfb is not installed. pbuilder-satisfydepends-dummy depends on xauth; however: Package xauth is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python3-skimage; however: Package python3-skimage is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx-design; however: Package python3-sphinx-design is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libblosc1{a} libbrotli1{a} libbsd0{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfontenc1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglib2.0-0t64{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libice6{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} libllvm17t64{a} liblzf1{a} liblzo2-2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libopenjp2-7{a} libpciaccess0{a} libpipeline1{a} libpixman-1-0{a} libpng16-16t64{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsharpyuv0{a} libsm6{a} libsnappy1v5{a} libssh2-1t64{a} libsub-override-perl{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libunwind8{a} libvulkan1{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-randr0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxfont2{a} libxft2{a} libxkbfile1{a} libxml2{a} libxmu6{a} libxmuu1{a} libxpm4{a} libxrandr2{a} libxrender1{a} libxshmfence1{a} libxslt1.1{a} libxss1{a} libxt6t64{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} media-types{a} meson{a} netbase{a} ninja-build{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python-babel-localedata{a} python-is-python3{a} python-matplotlib-data{a} python-tables-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-babel{a} python3-brotli{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-deepdiff{a} python3-dev{a} python3-distutils{a} python3-docutils{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-imageio{a} python3-imagesize{a} python3-iniconfig{a} python3-installer{a} python3-jinja2{a} python3-joblib{a} python3-jsonpickle{a} python3-kiwisolver{a} python3-lazy-loader{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-mesonpy{a} python3-minimal{a} python3-mpmath{a} python3-networkx{a} python3-nibabel{a} python3-numexpr{a} python3-numpy{a} python3-numpydoc{a} python3-ordered-set{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-pygments{a} python3-pyparsing{a} python3-pyproject-hooks{a} python3-pyproject-metadata{a} python3-pytest{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-six{a} python3-skimage{a} python3-skimage-lib{a} python3-sklearn{a} python3-sklearn-lib{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sphinx-design{a} python3-sympy{a} python3-tables{a} python3-tables-lib{a} python3-tabulate{a} python3-threadpoolctl{a} python3-tifffile{a} python3-tk{a} python3-toml{a} python3-tqdm{a} python3-trx-python{a} python3-typing-extensions{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3-wheel{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} x11-xkb-utils{a} xauth{a} xkb-data{a} xml-core{a} xserver-common{a} xvfb{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules lynx mesa-vulkan-drivers patchelf psmisc publicsuffix python3-bottleneck python3-bs4 python3-clevercsv python3-cssselect python3-dask python3-dipy python3-fuse python3-gdal python3-html5lib python3-odf python3-olefile python3-openpyxl python3-psutil python3-pydicom python3-pydot python3-pygraphviz python3-simplejson python3-yaml shared-mime-info wget xdg-user-dirs xfonts-base 0 packages upgraded, 283 newly installed, 0 to remove and 0 not upgraded. Need to get 245 MB of archives. After unpacking 1050 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main i386 libpython3.11-minimal i386 3.11.9-1 [817 kB] Get: 2 http://deb.debian.org/debian trixie/main i386 libexpat1 i386 2.6.2-1 [107 kB] Get: 3 http://deb.debian.org/debian trixie/main i386 python3.11-minimal i386 3.11.9-1 [1918 kB] Get: 4 http://deb.debian.org/debian trixie/main i386 python3-minimal i386 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian trixie/main i386 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main i386 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main i386 tzdata all 2024a-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main i386 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian trixie/main i386 libreadline8t64 i386 8.2-4 [171 kB] Get: 10 http://deb.debian.org/debian trixie/main i386 libpython3.11-stdlib i386 3.11.9-1 [1795 kB] Get: 11 http://deb.debian.org/debian trixie/main i386 python3.11 i386 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian trixie/main i386 libpython3-stdlib i386 3.11.8-1 [9336 B] Get: 13 http://deb.debian.org/debian trixie/main i386 python3 i386 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian trixie/main i386 libpython3.12-minimal i386 3.12.3-1 [809 kB] Get: 15 http://deb.debian.org/debian trixie/main i386 python3.12-minimal i386 3.12.3-1 [2224 kB] Get: 16 http://deb.debian.org/debian trixie/main i386 sgml-base all 1.31 [15.4 kB] Get: 17 http://deb.debian.org/debian trixie/main i386 libproc2-0 i386 2:4.0.4-4 [65.4 kB] Get: 18 http://deb.debian.org/debian trixie/main i386 procps i386 2:4.0.4-4 [876 kB] Get: 19 http://deb.debian.org/debian trixie/main i386 sensible-utils all 0.0.22 [22.4 kB] Get: 20 http://deb.debian.org/debian trixie/main i386 openssl i386 3.2.1-3 [1364 kB] Get: 21 http://deb.debian.org/debian trixie/main i386 ca-certificates all 20240203 [158 kB] Get: 22 http://deb.debian.org/debian trixie/main i386 libmagic-mgc i386 1:5.45-3 [314 kB] Get: 23 http://deb.debian.org/debian trixie/main i386 libmagic1t64 i386 1:5.45-3 [114 kB] Get: 24 http://deb.debian.org/debian trixie/main i386 file i386 1:5.45-3 [42.9 kB] Get: 25 http://deb.debian.org/debian trixie/main i386 gettext-base i386 0.21-14+b1 [162 kB] Get: 26 http://deb.debian.org/debian trixie/main i386 libuchardet0 i386 0.0.8-1+b1 [69.1 kB] Get: 27 http://deb.debian.org/debian trixie/main i386 groff-base i386 1.23.0-4 [1194 kB] Get: 28 http://deb.debian.org/debian trixie/main i386 bsdextrautils i386 2.40-8 [97.2 kB] Get: 29 http://deb.debian.org/debian trixie/main i386 libpipeline1 i386 1.5.7-2 [39.7 kB] Get: 30 http://deb.debian.org/debian trixie/main i386 man-db i386 2.12.1-1 [1421 kB] Get: 31 http://deb.debian.org/debian trixie/main i386 m4 i386 1.4.19-4 [293 kB] Get: 32 http://deb.debian.org/debian trixie/main i386 autoconf all 2.71-3 [332 kB] Get: 33 http://deb.debian.org/debian trixie/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 34 http://deb.debian.org/debian trixie/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 35 http://deb.debian.org/debian trixie/main i386 autopoint all 0.21-14 [496 kB] Get: 36 http://deb.debian.org/debian trixie/main i386 libtcl8.6 i386 8.6.14+dfsg-1 [1095 kB] Get: 37 http://deb.debian.org/debian trixie/main i386 libbrotli1 i386 1.1.0-2+b3 [314 kB] Get: 38 http://deb.debian.org/debian trixie/main i386 libpng16-16t64 i386 1.6.43-5 [286 kB] Get: 39 http://deb.debian.org/debian trixie/main i386 libfreetype6 i386 2.13.2+dfsg-1+b4 [449 kB] Get: 40 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 41 http://deb.debian.org/debian trixie/main i386 fonts-dejavu-core all 2.37-8 [840 kB] Get: 42 http://deb.debian.org/debian trixie/main i386 fontconfig-config i386 2.15.0-1.1 [317 kB] Get: 43 http://deb.debian.org/debian trixie/main i386 libfontconfig1 i386 2.15.0-1.1 [401 kB] Get: 44 http://deb.debian.org/debian trixie/main i386 libxau6 i386 1:1.0.9-1+b1 [18.5 kB] Get: 45 http://deb.debian.org/debian trixie/main i386 libbsd0 i386 0.12.2-1 [134 kB] Get: 46 http://deb.debian.org/debian trixie/main i386 libxdmcp6 i386 1:1.1.2-3+b1 [24.8 kB] Get: 47 http://deb.debian.org/debian trixie/main i386 libxcb1 i386 1.15-1 [148 kB] Get: 48 http://deb.debian.org/debian trixie/main i386 libx11-data all 2:1.8.7-1 [328 kB] Get: 49 http://deb.debian.org/debian trixie/main i386 libx11-6 i386 2:1.8.7-1+b1 [822 kB] Get: 50 http://deb.debian.org/debian trixie/main i386 libxrender1 i386 1:0.9.10-1.1+b1 [28.8 kB] Get: 51 http://deb.debian.org/debian trixie/main i386 libxft2 i386 2.3.6-1+b1 [55.3 kB] Get: 52 http://deb.debian.org/debian trixie/main i386 libxext6 i386 2:1.3.4-1+b1 [55.3 kB] Get: 53 http://deb.debian.org/debian trixie/main i386 x11-common all 1:7.7+23 [252 kB] Get: 54 http://deb.debian.org/debian trixie/main i386 libxss1 i386 1:1.2.3-1+b1 [17.3 kB] Get: 55 http://deb.debian.org/debian trixie/main i386 libtk8.6 i386 8.6.14-1 [826 kB] Get: 56 http://deb.debian.org/debian trixie/main i386 tk8.6-blt2.5 i386 2.5.3+dfsg-7 [616 kB] Get: 57 http://deb.debian.org/debian trixie/main i386 blt i386 2.5.3+dfsg-7 [6024 B] Get: 58 http://deb.debian.org/debian trixie/main i386 cython3 i386 3.0.10+dfsg-5 [3548 kB] Get: 59 http://deb.debian.org/debian trixie/main i386 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 60 http://deb.debian.org/debian trixie/main i386 libtool all 2.4.7-7 [517 kB] Get: 61 http://deb.debian.org/debian trixie/main i386 dh-autoreconf all 20 [17.1 kB] Get: 62 http://deb.debian.org/debian trixie/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 63 http://deb.debian.org/debian trixie/main i386 libsub-override-perl all 0.10-1 [10.6 kB] Get: 64 http://deb.debian.org/debian trixie/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 65 http://deb.debian.org/debian trixie/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 66 http://deb.debian.org/debian trixie/main i386 libelf1t64 i386 0.191-1+b1 [194 kB] Get: 67 http://deb.debian.org/debian trixie/main i386 dwz i386 0.15-1+b1 [116 kB] Get: 68 http://deb.debian.org/debian trixie/main i386 libicu72 i386 72.1-4+b1 [9549 kB] Get: 69 http://deb.debian.org/debian trixie/main i386 libxml2 i386 2.9.14+dfsg-1.3+b3 [727 kB] Get: 70 http://deb.debian.org/debian trixie/main i386 gettext i386 0.21-14+b1 [1311 kB] Get: 71 http://deb.debian.org/debian trixie/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 72 http://deb.debian.org/debian trixie/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 73 http://deb.debian.org/debian trixie/main i386 debhelper all 13.15.3 [901 kB] Get: 74 http://deb.debian.org/debian trixie/main i386 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 75 http://deb.debian.org/debian trixie/main i386 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 76 http://deb.debian.org/debian trixie/main i386 python3-distutils all 3.12.3-1 [131 kB] Get: 77 http://deb.debian.org/debian trixie/main i386 python3-setuptools all 68.1.2-2 [468 kB] Get: 78 http://deb.debian.org/debian trixie/main i386 dh-python all 6.20240422 [107 kB] Get: 79 http://deb.debian.org/debian trixie/main i386 xml-core all 0.19 [20.1 kB] Get: 80 http://deb.debian.org/debian trixie/main i386 docutils-common all 0.20.1+dfsg-3 [128 kB] Get: 81 http://deb.debian.org/debian trixie/main i386 fonts-lyx all 2.4.0~RC4-1 [189 kB] Get: 82 http://deb.debian.org/debian trixie/main i386 libaec0 i386 1.1.3-1 [24.5 kB] Get: 83 http://deb.debian.org/debian trixie/main i386 libblas3 i386 3.12.0-3 [140 kB] Get: 84 http://deb.debian.org/debian trixie/main i386 libsnappy1v5 i386 1.2.0-2 [31.1 kB] Get: 85 http://deb.debian.org/debian trixie/main i386 libblosc1 i386 1.21.5+ds-1+b1 [51.4 kB] Get: 86 http://deb.debian.org/debian trixie/main i386 libcom-err2 i386 1.47.1~rc2-1 [22.8 kB] Get: 87 http://deb.debian.org/debian trixie/main i386 libkrb5support0 i386 1.20.1-6+b1 [36.1 kB] Get: 88 http://deb.debian.org/debian trixie/main i386 libk5crypto3 i386 1.20.1-6+b1 [83.2 kB] Get: 89 http://deb.debian.org/debian trixie/main i386 libkeyutils1 i386 1.6.3-3 [9432 B] Get: 90 http://deb.debian.org/debian trixie/main i386 libkrb5-3 i386 1.20.1-6+b1 [360 kB] Get: 91 http://deb.debian.org/debian trixie/main i386 libgssapi-krb5-2 i386 1.20.1-6+b1 [145 kB] Get: 92 http://deb.debian.org/debian trixie/main i386 libsasl2-modules-db i386 2.1.28+dfsg1-6 [20.5 kB] Get: 93 http://deb.debian.org/debian trixie/main i386 libsasl2-2 i386 2.1.28+dfsg1-6 [60.6 kB] Get: 94 http://deb.debian.org/debian trixie/main i386 libldap-2.5-0 i386 2.5.17+dfsg-1 [198 kB] Get: 95 http://deb.debian.org/debian trixie/main i386 libnghttp2-14 i386 1.61.0-1+b1 [84.0 kB] Get: 96 http://deb.debian.org/debian trixie/main i386 libpsl5t64 i386 0.21.2-1.1 [57.4 kB] Get: 97 http://deb.debian.org/debian trixie/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b4 [62.0 kB] Get: 98 http://deb.debian.org/debian trixie/main i386 libssh2-1t64 i386 1.11.0-4.1+b2 [225 kB] Get: 99 http://deb.debian.org/debian trixie/main i386 libcurl4t64 i386 8.7.1-3 [477 kB] Get: 100 http://deb.debian.org/debian trixie/main i386 libdeflate0 i386 1.20-1 [46.9 kB] Get: 101 http://deb.debian.org/debian trixie/main i386 libdrm-common all 2.4.120-2 [7688 B] Get: 102 http://deb.debian.org/debian trixie/main i386 libdrm2 i386 2.4.120-2 [41.4 kB] Get: 103 http://deb.debian.org/debian trixie/main i386 libdrm-amdgpu1 i386 2.4.120-2 [24.4 kB] Get: 104 http://deb.debian.org/debian trixie/main i386 libpciaccess0 i386 0.17-3+b1 [53.8 kB] Get: 105 http://deb.debian.org/debian trixie/main i386 libdrm-intel1 i386 2.4.120-2 [66.5 kB] Get: 106 http://deb.debian.org/debian trixie/main i386 libdrm-nouveau2 i386 2.4.120-2 [20.8 kB] Get: 107 http://deb.debian.org/debian trixie/main i386 libdrm-radeon1 i386 2.4.120-2 [23.0 kB] Get: 108 http://deb.debian.org/debian trixie/main i386 libedit2 i386 3.1-20230828-1+b1 [97.8 kB] Get: 109 http://deb.debian.org/debian trixie/main i386 libexpat1-dev i386 2.6.2-1 [165 kB] Get: 110 http://deb.debian.org/debian trixie/main i386 libfontenc1 i386 1:1.1.8-1 [23.1 kB] Get: 111 http://deb.debian.org/debian trixie/main i386 libfribidi0 i386 1.0.13-3+b1 [71.8 kB] Get: 112 http://deb.debian.org/debian trixie/main i386 libgfortran5 i386 14-20240330-1 [735 kB] Get: 113 http://deb.debian.org/debian trixie/main i386 libglvnd0 i386 1.7.0-1+b1 [44.4 kB] Get: 114 http://deb.debian.org/debian trixie/main i386 libglapi-mesa i386 23.3.5-1 [35.4 kB] Get: 115 http://deb.debian.org/debian trixie/main i386 libx11-xcb1 i386 2:1.8.7-1+b1 [232 kB] Get: 116 http://deb.debian.org/debian trixie/main i386 libxcb-dri2-0 i386 1.15-1 [107 kB] Get: 117 http://deb.debian.org/debian trixie/main i386 libxcb-dri3-0 i386 1.15-1 [107 kB] Get: 118 http://deb.debian.org/debian trixie/main i386 libxcb-glx0 i386 1.15-1 [124 kB] Get: 119 http://deb.debian.org/debian trixie/main i386 libxcb-present0 i386 1.15-1 [106 kB] Get: 120 http://deb.debian.org/debian trixie/main i386 libxcb-randr0 i386 1.15-1 [118 kB] Get: 121 http://deb.debian.org/debian trixie/main i386 libxcb-shm0 i386 1.15-1 [106 kB] Get: 122 http://deb.debian.org/debian trixie/main i386 libxcb-sync1 i386 1.15-1 [109 kB] Get: 123 http://deb.debian.org/debian trixie/main i386 libxcb-xfixes0 i386 1.15-1 [110 kB] Get: 124 http://deb.debian.org/debian trixie/main i386 libxfixes3 i386 1:6.0.0-2+b1 [20.7 kB] Get: 125 http://deb.debian.org/debian trixie/main i386 libxshmfence1 i386 1.3-1+b1 [9028 B] Get: 126 http://deb.debian.org/debian trixie/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB] Get: 127 http://deb.debian.org/debian trixie/main i386 libvulkan1 i386 1.3.280.0-1 [132 kB] Get: 128 http://deb.debian.org/debian trixie/main i386 libz3-4 i386 4.8.12-3.1+b2 [7989 kB] Get: 129 http://deb.debian.org/debian trixie/main i386 libllvm17t64 i386 1:17.0.6-11 [27.7 MB] Get: 130 http://deb.debian.org/debian trixie/main i386 libsensors-config all 1:3.6.0-9 [14.6 kB] Get: 131 http://deb.debian.org/debian trixie/main i386 libsensors5 i386 1:3.6.0-9 [35.4 kB] Get: 132 http://deb.debian.org/debian trixie/main i386 libgl1-mesa-dri i386 23.3.5-1 [8327 kB] Get: 133 http://deb.debian.org/debian trixie/main i386 libglx-mesa0 i386 23.3.5-1 [157 kB] Get: 134 http://deb.debian.org/debian trixie/main i386 libglx0 i386 1.7.0-1+b1 [38.0 kB] Get: 135 http://deb.debian.org/debian trixie/main i386 libgl1 i386 1.7.0-1+b1 [82.7 kB] Get: 136 http://deb.debian.org/debian trixie/main i386 libglib2.0-0t64 i386 2.78.4-7 [1522 kB] Get: 137 http://deb.debian.org/debian trixie/main i386 libgraphite2-3 i386 1.3.14-2 [77.7 kB] Get: 138 http://deb.debian.org/debian trixie/main i386 libharfbuzz0b i386 8.3.0-2+b1 [2234 kB] Get: 139 http://deb.debian.org/debian trixie/main i386 libsz2 i386 1.1.3-1 [7824 B] Get: 140 http://deb.debian.org/debian trixie/main i386 libhdf5-103-1t64 i386 1.10.10+repack-3.3 [1178 kB] Get: 141 http://deb.debian.org/debian trixie/main i386 libhdf5-hl-100t64 i386 1.10.10+repack-3.3 [74.4 kB] Get: 142 http://deb.debian.org/debian trixie/main i386 libice6 i386 2:1.0.10-1+b1 [58.6 kB] Get: 143 http://deb.debian.org/debian trixie/main i386 libimagequant0 i386 2.18.0-1+b1 [35.9 kB] Get: 144 http://deb.debian.org/debian trixie/main i386 libjbig0 i386 2.1-6.1+b1 [31.8 kB] Get: 145 http://deb.debian.org/debian trixie/main i386 libjpeg62-turbo i386 1:2.1.5-3 [169 kB] Get: 146 http://deb.debian.org/debian trixie/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 147 http://deb.debian.org/debian trixie/main i386 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 148 http://deb.debian.org/debian trixie/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 149 http://deb.debian.org/debian trixie/main i386 libjs-sphinxdoc all 7.2.6-6 [150 kB] Get: 150 http://deb.debian.org/debian trixie/main i386 libjson-perl all 4.10000-1 [87.5 kB] Get: 151 http://deb.debian.org/debian trixie/main i386 liblapack3 i386 3.12.0-3 [2167 kB] Get: 152 http://deb.debian.org/debian trixie/main i386 liblbfgsb0 i386 3.0+dfsg.4-1+b1 [29.1 kB] Get: 153 http://deb.debian.org/debian trixie/main i386 liblcms2-2 i386 2.14-2+b1 [165 kB] Get: 154 http://deb.debian.org/debian trixie/main i386 liblerc4 i386 4.0.0+ds-4+b1 [180 kB] Get: 155 http://deb.debian.org/debian trixie/main i386 liblzf1 i386 3.6-4+b1 [10.1 kB] Get: 156 http://deb.debian.org/debian trixie/main i386 liblzo2-2 i386 2.10-2+b1 [58.0 kB] Get: 157 http://deb.debian.org/debian trixie/main i386 libopenjp2-7 i386 2.5.0-2+b3 [197 kB] Get: 158 http://deb.debian.org/debian trixie/main i386 libpixman-1-0 i386 0.42.2-1+b1 [555 kB] Get: 159 http://deb.debian.org/debian trixie/main i386 libpython3.11t64 i386 3.11.9-1 [1982 kB] Get: 160 http://deb.debian.org/debian trixie/main i386 zlib1g-dev i386 1:1.3.dfsg-3.1 [915 kB] Get: 161 http://deb.debian.org/debian trixie/main i386 libpython3.11-dev i386 3.11.9-1 [4632 kB] Get: 162 http://deb.debian.org/debian trixie/main i386 libpython3-dev i386 3.11.8-1 [9600 B] Get: 163 http://deb.debian.org/debian trixie/main i386 libpython3.12-stdlib i386 3.12.3-1 [1945 kB] Get: 164 http://deb.debian.org/debian trixie/main i386 libpython3.12t64 i386 3.12.3-1 [2141 kB] Get: 165 http://deb.debian.org/debian trixie/main i386 libpython3.12-dev i386 3.12.3-1 [5240 kB] Get: 166 http://deb.debian.org/debian trixie/main i386 libpython3-all-dev i386 3.11.8-1 [1068 B] Get: 167 http://deb.debian.org/debian trixie/main i386 libqhull-r8.0 i386 2020.2-6+b1 [256 kB] Get: 168 http://deb.debian.org/debian trixie/main i386 libraqm0 i386 0.10.1-1+b1 [14.7 kB] Get: 169 http://deb.debian.org/debian trixie/main i386 libsharpyuv0 i386 1.3.2-0.4+b1 [107 kB] Get: 170 http://deb.debian.org/debian trixie/main i386 libsm6 i386 2:1.2.3-1+b1 [33.9 kB] Get: 171 http://deb.debian.org/debian trixie/main i386 libwebp7 i386 1.3.2-0.4+b1 [314 kB] Get: 172 http://deb.debian.org/debian trixie/main i386 libtiff6 i386 4.5.1+git230720-4 [338 kB] Get: 173 http://deb.debian.org/debian trixie/main i386 libunwind8 i386 1.6.2-3+b1 [49.2 kB] Get: 174 http://deb.debian.org/debian trixie/main i386 libwebpdemux2 i386 1.3.2-0.4+b1 [108 kB] Get: 175 http://deb.debian.org/debian trixie/main i386 libwebpmux3 i386 1.3.2-0.4+b1 [122 kB] Get: 176 http://deb.debian.org/debian trixie/main i386 libxt6t64 i386 1:1.2.1-1.2 [193 kB] Get: 177 http://deb.debian.org/debian trixie/main i386 libxmu6 i386 2:1.1.3-3+b2 [60.5 kB] Get: 178 http://deb.debian.org/debian trixie/main i386 libxpm4 i386 1:3.5.17-1+b1 [57.8 kB] Get: 179 http://deb.debian.org/debian trixie/main i386 libxaw7 i386 2:1.0.14-1+b2 [208 kB] Get: 180 http://deb.debian.org/debian trixie/main i386 libxfont2 i386 1:2.0.6-1+b1 [135 kB] Get: 181 http://deb.debian.org/debian trixie/main i386 libxkbfile1 i386 1:1.1.0-1+b1 [80.0 kB] Get: 182 http://deb.debian.org/debian trixie/main i386 libxmuu1 i386 2:1.1.3-3+b2 [21.9 kB] Get: 183 http://deb.debian.org/debian trixie/main i386 libxrandr2 i386 2:1.5.4-1 [37.7 kB] Get: 184 http://deb.debian.org/debian trixie/main i386 libxslt1.1 i386 1.1.35-1+b1 [243 kB] Get: 185 http://deb.debian.org/debian trixie/main i386 ninja-build i386 1.11.1-2 [160 kB] Get: 186 http://deb.debian.org/debian trixie/main i386 meson all 1.2.3-1 [586 kB] Get: 187 http://deb.debian.org/debian trixie/main i386 python3-packaging all 24.0-1 [45.5 kB] Get: 188 http://deb.debian.org/debian trixie/main i386 python3-pyproject-hooks all 1.0.0-2 [10.6 kB] Get: 189 http://deb.debian.org/debian trixie/main i386 python3-toml all 0.10.2-1 [16.2 kB] Get: 190 http://deb.debian.org/debian trixie/main i386 python3-wheel all 0.43.0-1 [52.5 kB] Get: 191 http://deb.debian.org/debian trixie/main i386 python3-build all 1.1.1-1 [32.5 kB] Get: 192 http://deb.debian.org/debian trixie/main i386 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 193 http://deb.debian.org/debian trixie/main i386 pybuild-plugin-pyproject all 6.20240422 [11.1 kB] Get: 194 http://deb.debian.org/debian trixie/main i386 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 195 http://deb.debian.org/debian trixie/main i386 python-is-python3 all 3.11.4-1 [3044 B] Get: 196 http://deb.debian.org/debian trixie/main i386 python-matplotlib-data all 3.6.3-2 [2744 kB] Get: 197 http://deb.debian.org/debian trixie/main i386 python-tables-data all 3.7.0-10 [47.6 kB] Get: 198 http://deb.debian.org/debian trixie/main i386 python3-alabaster all 0.7.12-1 [20.8 kB] Get: 199 http://deb.debian.org/debian trixie/main i386 python3.12 i386 3.12.3-1 [659 kB] Get: 200 http://deb.debian.org/debian trixie/main i386 python3-all i386 3.11.8-1 [1056 B] Get: 201 http://deb.debian.org/debian trixie/main i386 python3.11-dev i386 3.11.9-1 [501 kB] Get: 202 http://deb.debian.org/debian trixie/main i386 python3-dev i386 3.11.8-1 [26.1 kB] Get: 203 http://deb.debian.org/debian trixie/main i386 python3.12-dev i386 3.12.3-1 [499 kB] Get: 204 http://deb.debian.org/debian trixie/main i386 python3-all-dev i386 3.11.8-1 [1072 B] Get: 205 http://deb.debian.org/debian trixie/main i386 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 206 http://deb.debian.org/debian trixie/main i386 python3-attr all 23.2.0-2 [65.5 kB] Get: 207 http://deb.debian.org/debian trixie/main i386 python3-tz all 2024.1-2 [30.9 kB] Get: 208 http://deb.debian.org/debian trixie/main i386 python3-babel all 2.14.0-1 [111 kB] Get: 209 http://deb.debian.org/debian trixie/main i386 python3-brotli i386 1.1.0-2+b3 [323 kB] Get: 210 http://deb.debian.org/debian trixie/main i386 python3-certifi all 2023.11.17-1 [155 kB] Get: 211 http://deb.debian.org/debian trixie/main i386 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 212 http://deb.debian.org/debian trixie/main i386 python3-charset-normalizer all 3.3.2-1 [51.6 kB] Get: 213 http://deb.debian.org/debian trixie/main i386 python3-numpy i386 1:1.26.4+ds-8 [5469 kB] Get: 214 http://deb.debian.org/debian trixie/main i386 python3-contourpy i386 1.0.7-3 [295 kB] Get: 215 http://deb.debian.org/debian trixie/main i386 python3-cycler all 0.12.1-1 [9496 B] Get: 216 http://deb.debian.org/debian trixie/main i386 python3-six all 1.16.0-6 [16.3 kB] Get: 217 http://deb.debian.org/debian trixie/main i386 python3-dateutil all 2.9.0-2 [79.4 kB] Get: 218 http://deb.debian.org/debian trixie/main i386 python3-decorator all 5.1.1-5 [15.1 kB] Get: 219 http://deb.debian.org/debian trixie/main i386 python3-jsonpickle all 3.0.4+dfsg-1 [41.4 kB] Get: 220 http://deb.debian.org/debian trixie/main i386 python3-ordered-set all 4.1.0-1 [9628 B] Get: 221 http://deb.debian.org/debian trixie/main i386 python3-deepdiff all 6.7.1-2 [65.6 kB] Get: 222 http://deb.debian.org/debian trixie/main i386 python3-roman all 3.3-3 [9880 B] Get: 223 http://deb.debian.org/debian trixie/main i386 python3-docutils all 0.20.1+dfsg-3 [389 kB] Get: 224 http://deb.debian.org/debian trixie/main i386 python3-scipy i386 1.11.4-6 [19.0 MB] Get: 225 http://deb.debian.org/debian trixie/main i386 python3-typing-extensions all 4.10.0-1 [66.2 kB] Get: 226 http://deb.debian.org/debian trixie/main i386 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 227 http://deb.debian.org/debian trixie/main i386 python3-mpmath all 1.3.0-1 [419 kB] Get: 228 http://deb.debian.org/debian trixie/main i386 python3-sympy all 1.12-7 [3869 kB] Get: 229 http://deb.debian.org/debian trixie/main i386 python3-fs all 2.4.16-4 [95.4 kB] Get: 230 http://deb.debian.org/debian trixie/main i386 python3-lxml i386 5.1.0-1 [2065 kB] Get: 231 http://deb.debian.org/debian trixie/main i386 python3-lz4 i386 4.0.2+dfsg-1+b3 [25.6 kB] Get: 232 http://deb.debian.org/debian trixie/main i386 unicode-data all 15.1.0-1 [8547 kB] Get: 233 http://deb.debian.org/debian trixie/main i386 python3-fonttools i386 4.46.0-1 [1613 kB] Get: 234 http://deb.debian.org/debian trixie/main i386 python3-h5py-serial i386 3.10.0-1+b3 [1397 kB] Get: 235 http://deb.debian.org/debian trixie/main i386 python3-h5py all 3.10.0-1 [14.4 kB] Get: 236 http://deb.debian.org/debian trixie/main i386 python3-idna all 3.6-2 [37.0 kB] Get: 237 http://deb.debian.org/debian trixie/main i386 python3-tk i386 3.12.3-1 [110 kB] Get: 238 http://deb.debian.org/debian trixie/main i386 python3-pil.imagetk i386 10.3.0-2 [79.7 kB] Get: 239 http://deb.debian.org/debian trixie/main i386 python3-pil i386 10.3.0-2 [566 kB] Get: 240 http://deb.debian.org/debian trixie/main i386 python3-imageio all 2.34.0-1 [228 kB] Get: 241 http://deb.debian.org/debian trixie/main i386 python3-imagesize all 1.4.1-1 [6688 B] Get: 242 http://deb.debian.org/debian trixie/main i386 python3-iniconfig all 1.1.1-2 [6396 B] Get: 243 http://deb.debian.org/debian trixie/main i386 python3-markupsafe i386 2.1.5-1 [14.4 kB] Get: 244 http://deb.debian.org/debian trixie/main i386 python3-jinja2 all 3.1.3-1 [119 kB] Get: 245 http://deb.debian.org/debian trixie/main i386 python3-joblib all 1.3.2-2 [218 kB] Get: 246 http://deb.debian.org/debian trixie/main i386 python3-kiwisolver i386 1.4.5-1 [84.8 kB] Get: 247 http://deb.debian.org/debian trixie/main i386 python3-lazy-loader all 0.3-1 [11.1 kB] Get: 248 http://deb.debian.org/debian trixie/main i386 python3-pyparsing all 3.1.2-1 [146 kB] Get: 249 http://deb.debian.org/debian trixie/main i386 python3-matplotlib i386 3.6.3-2 [8059 kB] Get: 250 http://deb.debian.org/debian trixie/main i386 python3-pyproject-metadata all 0.8.0-1 [9648 B] Get: 251 http://deb.debian.org/debian trixie/main i386 python3-mesonpy all 0.15.0-1 [101 kB] Get: 252 http://deb.debian.org/debian trixie/main i386 python3-networkx all 2.8.8-2 [1425 kB] Get: 253 http://deb.debian.org/debian trixie/main i386 python3-nibabel all 5.2.1-1 [2659 kB] Get: 254 http://deb.debian.org/debian trixie/main i386 python3-numexpr i386 2.10.0-2 [103 kB] Get: 255 http://deb.debian.org/debian trixie/main i386 sphinx-common all 7.2.6-6 [702 kB] Get: 256 http://deb.debian.org/debian trixie/main i386 python3-pygments all 2.17.2+dfsg-1 [818 kB] Get: 257 http://deb.debian.org/debian trixie/main i386 python3-urllib3 all 1.26.18-2 [116 kB] Get: 258 http://deb.debian.org/debian trixie/main i386 python3-requests all 2.31.0+dfsg-1 [68.6 kB] Get: 259 http://deb.debian.org/debian trixie/main i386 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 260 http://deb.debian.org/debian trixie/main i386 python3-sphinx all 7.2.6-6 [552 kB] Get: 261 http://deb.debian.org/debian trixie/main i386 python3-tabulate all 0.8.10-1 [38.8 kB] Get: 262 http://deb.debian.org/debian trixie/main i386 python3-numpydoc all 1.6.0-2 [49.6 kB] Get: 263 http://deb.debian.org/debian trixie/main i386 python3-pandas-lib i386 2.1.4+dfsg-7 [7497 kB] Get: 264 http://deb.debian.org/debian trixie/main i386 python3-pandas all 2.1.4+dfsg-7 [3015 kB] Get: 265 http://deb.debian.org/debian trixie/main i386 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 266 http://deb.debian.org/debian trixie/main i386 python3-pytest all 7.4.4-3 [239 kB] Get: 267 http://deb.debian.org/debian trixie/main i386 python3-setuptools-scm all 8.0.4-2 [39.5 kB] Get: 268 http://deb.debian.org/debian trixie/main i386 python3-skimage-lib i386 0.22.0-3 [3608 kB] Get: 269 http://deb.debian.org/debian trixie/main i386 python3-tifffile all 20240424-1 [183 kB] Get: 270 http://deb.debian.org/debian trixie/main i386 python3-skimage all 0.22.0-3 [20.6 MB] Get: 271 http://deb.debian.org/debian trixie/main i386 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 272 http://deb.debian.org/debian trixie/main i386 python3-sklearn-lib i386 1.4.2+dfsg-1 [6126 kB] Get: 273 http://deb.debian.org/debian trixie/main i386 python3-sklearn all 1.4.2+dfsg-1 [2247 kB] Get: 274 http://deb.debian.org/debian trixie/main i386 python3-sphinx-design all 0.5.0-2 [851 kB] Get: 275 http://deb.debian.org/debian trixie/main i386 python3-tables-lib i386 3.7.0-10+b1 [715 kB] Get: 276 http://deb.debian.org/debian trixie/main i386 python3-tables all 3.7.0-10 [338 kB] Get: 277 http://deb.debian.org/debian trixie/main i386 python3-tqdm all 4.66.2-3 [90.7 kB] Get: 278 http://deb.debian.org/debian trixie/main i386 python3-trx-python all 0.2.9-1 [40.2 kB] Get: 279 http://deb.debian.org/debian trixie/main i386 x11-xkb-utils i386 7.7+8+b1 [164 kB] Get: 280 http://deb.debian.org/debian trixie/main i386 xauth i386 1:1.1.2-1 [36.7 kB] Get: 281 http://deb.debian.org/debian trixie/main i386 xkb-data all 2.41-2 [795 kB] Get: 282 http://deb.debian.org/debian trixie/main i386 xserver-common all 2:21.1.12-1 [2391 kB] Get: 283 http://deb.debian.org/debian trixie/main i386 xvfb i386 2:21.1.12-1 [3214 kB] Fetched 245 MB in 13s (19.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19683 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_i386.deb ... Unpacking libpython3.11-minimal:i386 (3.11.9-1) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.6.2-1_i386.deb ... Unpacking libexpat1:i386 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_i386.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:i386 (3.11.9-1) ... Setting up libexpat1:i386 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19999 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_i386.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-3_all.deb ... Unpacking tzdata (2024a-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:i386. Preparing to unpack .../5-libreadline8t64_8.2-4_i386.deb ... Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8 to /lib/i386-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libhistory.so.8.2 to /lib/i386-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8 to /lib/i386-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/i386-linux-gnu/libreadline.so.8.2 to /lib/i386-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:i386 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:i386. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_i386.deb ... Unpacking libpython3.11-stdlib:i386 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_i386.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20991 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_i386.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package libpython3.12-minimal:i386. Preparing to unpack .../001-libpython3.12-minimal_3.12.3-1_i386.deb ... Unpacking libpython3.12-minimal:i386 (3.12.3-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../002-python3.12-minimal_3.12.3-1_i386.deb ... Unpacking python3.12-minimal (3.12.3-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../003-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:i386. Preparing to unpack .../004-libproc2-0_2%3a4.0.4-4_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../005-procps_2%3a4.0.4-4_i386.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../006-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../007-openssl_3.2.1-3_i386.deb ... Unpacking openssl (3.2.1-3) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../008-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../009-libmagic-mgc_1%3a5.45-3_i386.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:i386. Preparing to unpack .../010-libmagic1t64_1%3a5.45-3_i386.deb ... Unpacking libmagic1t64:i386 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../011-file_1%3a5.45-3_i386.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../012-gettext-base_0.21-14+b1_i386.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../013-libuchardet0_0.0.8-1+b1_i386.deb ... Unpacking libuchardet0:i386 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../014-groff-base_1.23.0-4_i386.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../015-bsdextrautils_2.40-8_i386.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../016-libpipeline1_1.5.7-2_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../017-man-db_2.12.1-1_i386.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../018-m4_1.4.19-4_i386.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../019-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../020-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../021-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../022-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libtcl8.6:i386. Preparing to unpack .../023-libtcl8.6_8.6.14+dfsg-1_i386.deb ... Unpacking libtcl8.6:i386 (8.6.14+dfsg-1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../024-libbrotli1_1.1.0-2+b3_i386.deb ... Unpacking libbrotli1:i386 (1.1.0-2+b3) ... Selecting previously unselected package libpng16-16t64:i386. Preparing to unpack .../025-libpng16-16t64_1.6.43-5_i386.deb ... Unpacking libpng16-16t64:i386 (1.6.43-5) ... Selecting previously unselected package libfreetype6:i386. Preparing to unpack .../026-libfreetype6_2.13.2+dfsg-1+b4_i386.deb ... Unpacking libfreetype6:i386 (2.13.2+dfsg-1+b4) ... Selecting previously unselected package fonts-dejavu-mono. Preparing to unpack .../027-fonts-dejavu-mono_2.37-8_all.deb ... Unpacking fonts-dejavu-mono (2.37-8) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../028-fonts-dejavu-core_2.37-8_all.deb ... Unpacking fonts-dejavu-core (2.37-8) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../029-fontconfig-config_2.15.0-1.1_i386.deb ... Unpacking fontconfig-config (2.15.0-1.1) ... Selecting previously unselected package libfontconfig1:i386. Preparing to unpack .../030-libfontconfig1_2.15.0-1.1_i386.deb ... Unpacking libfontconfig1:i386 (2.15.0-1.1) ... Selecting previously unselected package libxau6:i386. Preparing to unpack .../031-libxau6_1%3a1.0.9-1+b1_i386.deb ... Unpacking libxau6:i386 (1:1.0.9-1+b1) ... Selecting previously unselected package libbsd0:i386. Preparing to unpack .../032-libbsd0_0.12.2-1_i386.deb ... Unpacking libbsd0:i386 (0.12.2-1) ... Selecting previously unselected package libxdmcp6:i386. Preparing to unpack .../033-libxdmcp6_1%3a1.1.2-3+b1_i386.deb ... Unpacking libxdmcp6:i386 (1:1.1.2-3+b1) ... Selecting previously unselected package libxcb1:i386. Preparing to unpack .../034-libxcb1_1.15-1_i386.deb ... Unpacking libxcb1:i386 (1.15-1) ... Selecting previously unselected package libx11-data. Preparing to unpack .../035-libx11-data_2%3a1.8.7-1_all.deb ... Unpacking libx11-data (2:1.8.7-1) ... Selecting previously unselected package libx11-6:i386. Preparing to unpack .../036-libx11-6_2%3a1.8.7-1+b1_i386.deb ... Unpacking libx11-6:i386 (2:1.8.7-1+b1) ... Selecting previously unselected package libxrender1:i386. Preparing to unpack .../037-libxrender1_1%3a0.9.10-1.1+b1_i386.deb ... Unpacking libxrender1:i386 (1:0.9.10-1.1+b1) ... Selecting previously unselected package libxft2:i386. Preparing to unpack .../038-libxft2_2.3.6-1+b1_i386.deb ... Unpacking libxft2:i386 (2.3.6-1+b1) ... Selecting previously unselected package libxext6:i386. Preparing to unpack .../039-libxext6_2%3a1.3.4-1+b1_i386.deb ... Unpacking libxext6:i386 (2:1.3.4-1+b1) ... Selecting previously unselected package x11-common. Preparing to unpack .../040-x11-common_1%3a7.7+23_all.deb ... Unpacking x11-common (1:7.7+23) ... Selecting previously unselected package libxss1:i386. Preparing to unpack .../041-libxss1_1%3a1.2.3-1+b1_i386.deb ... Unpacking libxss1:i386 (1:1.2.3-1+b1) ... Selecting previously unselected package libtk8.6:i386. Preparing to unpack .../042-libtk8.6_8.6.14-1_i386.deb ... Unpacking libtk8.6:i386 (8.6.14-1) ... Selecting previously unselected package tk8.6-blt2.5. Preparing to unpack .../043-tk8.6-blt2.5_2.5.3+dfsg-7_i386.deb ... Unpacking tk8.6-blt2.5 (2.5.3+dfsg-7) ... Selecting previously unselected package blt. Preparing to unpack .../044-blt_2.5.3+dfsg-7_i386.deb ... Unpacking blt (2.5.3+dfsg-7) ... Selecting previously unselected package cython3. Preparing to unpack .../045-cython3_3.0.10+dfsg-5_i386.deb ... Unpacking cython3 (3.0.10+dfsg-5) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../046-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../047-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../048-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../049-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../050-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... 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Setting up autotools-dev (20220109.1) ... Setting up libz3-4:i386 (4.8.12-3.1+b2) ... Setting up libglib2.0-0t64:i386 (2.78.4-7) ... No schema files found: doing nothing. Setting up libblas3:i386 (3.12.0-3) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up libexpat1-dev:i386 (2.6.2-1) ... Setting up libjpeg62-turbo:i386 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up liblzf1:i386 (3.6-4+b1) ... Setting up libfribidi0:i386 (1.0.13-3+b1) ... Setting up libimagequant0:i386 (2.18.0-1+b1) ... Setting up libproc2-0:i386 (2:4.0.4-4) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:i386 (1.6.43-5) ... Setting up libtcl8.6:i386 (8.6.14+dfsg-1) ... Setting up autopoint (0.21-14) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libsensors5:i386 (1:3.6.0-9) ... 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Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-lz4 (4.0.2+dfsg-1+b3) ... Setting up python3-charset-normalizer (3.3.2-1) ... Setting up python3-pytest (7.4.4-3) ... Setting up python3-alabaster (0.7.12-1) ... Setting up x11-xkb-utils (7.7+8+b1) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3-tqdm (4.66.2-3) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-tabulate (0.8.10-1) ... Setting up meson (1.2.3-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-ordered-set (4.1.0-1) ... Setting up python3-tk:i386 (3.12.3-1) ... Setting up python3-networkx (2.8.8-2) ... /usr/lib/python3/dist-packages/networkx/readwrite/tests/test_gml.py:556: SyntaxWarning: invalid octal escape sequence '\420' "graph [edge [ source u'u\4200' target u'u\4200' ] " /usr/lib/python3/dist-packages/networkx/readwrite/tests/test_gml.py:557: SyntaxWarning: invalid octal escape sequence '\420' + "node [ id u'u\4200' label b ] ]" Setting up python3-setuptools-scm (8.0.4-2) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-pil.imagetk:i386 (10.3.0-2) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-requests (2.31.0+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-8) ... Setting up python3-mesonpy (0.15.0-1) ... Setting up python3-contourpy (1.0.7-3) ... Setting up xserver-common (2:21.1.12-1) ... Setting up python3-imageio (2.34.0-1) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... 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Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.20.1+dfsg-3) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.20.1+dfsg-3) ... Setting up python3-sphinx (7.2.6-6) ... Setting up python3-sphinx-design (0.5.0-2) ... Setting up python3-numpydoc (1.6.0-2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/43414/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/43414/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/dipy-1.8.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dipy_1.8.0-2_source.changes dpkg-buildpackage: info: source package dipy dpkg-buildpackage: info: source version 1.8.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 dpkg-source: info: using options from dipy-1.8.0/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' dh_auto_clean || true rm -rf .pybuild __pycache__ find dipy -name "*\.c" -delete make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' dh_autoreconf_clean -O--buildsystem=pybuild debian/rules execute_before_dh_clean make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' rm -rf build doc-stamp /usr/bin/make -C doc clean make[2]: Entering directory '/build/reproducible-path/dipy-1.8.0/doc' rm -rf reference/*.rst rm -rf reference_cmd/*.rst rm -rf examples_revamped cd examples_built && find . -not -name "README" -not -name ".gitignore" -exec rm -rfd {} \; || true rm: refusing to remove '.' or '..' directory: skipping '.' rm -rf _build/* rm *-stamp rm: cannot remove '*-stamp': No such file or directory make[2]: [Makefile:32: clean] Error 1 (ignored) make[2]: Leaving directory '/build/reproducible-path/dipy-1.8.0/doc' make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' chmod 0644 doc/examples/*.py dh_auto_build I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.12_dipy --config-setting compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/i386-linux-gnu * Building wheel... + meson setup /build/reproducible-path/dipy-1.8.0 /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/i386-linux-gnu --native-file=/build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/meson-python-native-file.ini The Meson build system Version: 1.2.3 Source dir: /build/reproducible-path/dipy-1.8.0 Build dir: /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy Build type: native build Project name: dipy Project version: 1.8.0 C compiler for the host machine: cc (gcc 13.2.0 "cc (Debian 13.2.0-24) 13.2.0") C linker for the host machine: cc ld.bfd 2.42 C++ compiler for the host machine: c++ (gcc 13.2.0 "c++ (Debian 13.2.0-24) 13.2.0") C++ linker for the host machine: c++ ld.bfd 2.42 Cython compiler for the host machine: cython (cython 3.0.10) Host machine cpu family: x86 Host machine cpu: i686 Program python found: YES (/usr/bin/python3.12) Did not find pkg-config by name 'pkg-config' Found Pkg-config: NO Run-time dependency python found: YES 3.12 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: NO Checking if "compiler supports SSE4.1 intrinsics" : links: NO Checking if "compiler supports AVX intrinsics" : links: NO Checking if "ARM NEON intrinsics" compiles: NO Build targets in project: 44 dipy 1.8.0 User defined options Native files : /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/meson-python-native-file.ini buildtype : release libdir : lib/i386-linux-gnu localstatedir: /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload b_ndebug : if-release b_vscrt : md Found ninja-1.11.1 at /usr/bin/ninja Generating targets: 0%| | 0/44 eta ? Generating targets: 36%|███▋ | 16/44 eta 00:00 Generating targets: 84%|████████▍ | 37/44 eta 00:00 Writing build.ninja: 0%| | 0/184 eta ? + /usr/bin/ninja --verbose [1/120] /usr/bin/meson --internal copy ../dipy/../src/conditional_omp.h dipy/conditional_omp.h [2/120] /usr/bin/python3.12 ../dipy/../tools/version_utils.py --source-root .. [3/120] /usr/bin/meson --internal copy ../dipy/../src/dpy_math.h dipy/dpy_math.h [4/120] /usr/bin/meson --internal copy ../dipy/../src/cythonutils.h dipy/cythonutils.h [5/120] /usr/bin/meson --internal copy ../dipy/../src/safe_openmp.pxd dipy/safe_openmp.pxd [6/120] /usr/bin/meson --internal copy ../dipy/__init__.py dipy/__init__.py [7/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so.p/pca_noise_estimate.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/denoise/pca_noise_estimate.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/denoise/pca_noise_estimate.pyx:95:49: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined [8/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/bundlemin.cpython-312-i386-linux-gnu.so.p/bundlemin.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/align/bundlemin.pyx [9/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so.p/denspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/denoise/denspeed.pyx [10/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so.p/shift_twist_convolution.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/denoise/shift_twist_convolution.pyx [11/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so.p/nlmeans_block.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/denoise/nlmeans_block.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:74:5: Exception check on '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:120:5: Exception check on '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:428:38: Exception check after calling '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:430:36: Exception check after calling '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:453:54: Exception check after calling '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:458:40: Exception check after calling '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. [12/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so.p/bootstrap_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/direction/bootstrap_direction_getter.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/direction/bootstrap_direction_getter.pyx:153:20: Use boundscheck(False) for faster access [13/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so.p/enhancement_kernel.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/denoise/enhancement_kernel.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/enhancement_kernel.pyx:399:5: Exception check on 'euler_angles' will always require the GIL to be acquired. Declare 'euler_angles' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/enhancement_kernel.pyx:444:5: Exception check on 'R' will always require the GIL to be acquired. Declare 'R' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/enhancement_kernel.pyx:206:67: Exception check after calling 'k2' will always require the GIL to be acquired. Declare 'k2' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/enhancement_kernel.pyx:247:30: Exception check after calling 'k2' will always require the GIL to be acquired. Declare 'k2' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [14/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/transforms.cpython-312-i386-linux-gnu.so.p/transforms.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/align/transforms.pyx [15/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/expectmax.cpython-312-i386-linux-gnu.so.p/expectmax.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/align/expectmax.pyx [16/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/parzenhist.cpython-312-i386-linux-gnu.so.p/parzenhist.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/align/parzenhist.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:923:59: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:923:59: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1035:63: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1035:63: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1125:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1125:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1216:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1216:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [17/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so.p/closest_peak_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/direction/closest_peak_direction_getter.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/closest_peak_direction_getter.pyx:108:36: Exception check after calling 'get_pmf_c' will always require the GIL to be acquired. Declare 'get_pmf_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [18/120] /usr/bin/cython -3 --fast-fail --output-file dipy/core/interpolation.cpython-312-i386-linux-gnu.so.p/interpolation.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/core/interpolation.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:33:24: No exception value declared for 'offset' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pyx:117:5: Exception check on 'splitoffset' will always require the GIL to be acquired. Possible solutions: 1. Declare 'splitoffset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'splitoffset' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pyx:245:5: Exception check on '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:10:34: No exception value declared for 'trilinear_interpolate4d_c' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:15:31: No exception value declared for '_interpolate_vector_2d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:17:31: No exception value declared for '_interpolate_scalar_2d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:19:34: No exception value declared for '_interpolate_scalar_nn_2d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:21:34: No exception value declared for '_interpolate_scalar_nn_3d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:24:31: No exception value declared for '_interpolate_scalar_3d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:27:31: No exception value declared for '_interpolate_vector_3d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pyx:233:40: Exception check after calling '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. [19/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so.p/sumsqdiff.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/align/sumsqdiff.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/sumsqdiff.pyx:15:5: Exception check on '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/sumsqdiff.pyx:274:61: Exception check after calling '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/sumsqdiff.pyx:274:61: Exception check after calling '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. [20/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/crosscorr.cpython-312-i386-linux-gnu.so.p/crosscorr.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/align/crosscorr.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:56:5: Exception check on '_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:204:35: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:244:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:247:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:250:47: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:253:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:256:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:259:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:263:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:204:35: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:244:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:247:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:250:47: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:253:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:256:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:259:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:263:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. [21/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/vector_fields.cpython-312-i386-linux-gnu.so.p/vector_fields.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/align/vector_fields.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:35:5: Exception check on '_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:234:5: Exception check on '_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:144:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:144:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:351:57: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:351:57: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:525:47: Exception check after calling '__pyx_fuse_0_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:525:47: Exception check after calling '__pyx_fuse_1_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:631:47: Exception check after calling '__pyx_fuse_0_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:631:47: Exception check after calling '__pyx_fuse_1_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:760:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:760:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:886:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:886:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1238:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1238:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1308:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1308:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1422:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1452:61: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1422:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1452:61: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1519:61: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1519:61: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1811:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1834:48: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1811:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1834:48: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1894:48: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1894:48: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2607:66: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2623:66: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2607:66: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2623:66: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2693:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2709:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2693:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2709:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2780:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2792:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2780:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2792:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2856:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2868:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2856:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2868:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. [22/120] cc -Idipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -MF dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o.d -o dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -c dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so.p/shift_twist_convolution.c [23/120] cc -o dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [24/120] cc -Idipy/denoise/denspeed.cpython-312-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_denspeed.c.o -MF dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_denspeed.c.o.d -o dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_denspeed.c.o -c dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so.p/denspeed.c [25/120] cc -o dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_denspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [26/120] cc -Idipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -MF dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so.p/meson-generated_nlmeans_block.c.o.d -o dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -c dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so.p/nlmeans_block.c [27/120] cc -o dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [28/120] cc -Idipy/align/bundlemin.cpython-312-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/bundlemin.cpython-312-i386-linux-gnu.so.p/meson-generated_bundlemin.c.o -MF dipy/align/bundlemin.cpython-312-i386-linux-gnu.so.p/meson-generated_bundlemin.c.o.d -o dipy/align/bundlemin.cpython-312-i386-linux-gnu.so.p/meson-generated_bundlemin.c.o -c dipy/align/bundlemin.cpython-312-i386-linux-gnu.so.p/bundlemin.c [29/120] cc -o dipy/align/bundlemin.cpython-312-i386-linux-gnu.so dipy/align/bundlemin.cpython-312-i386-linux-gnu.so.p/meson-generated_bundlemin.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [30/120] cc -Idipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -MF dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o.d -o dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -c dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so.p/pca_noise_estimate.c [31/120] cc -o dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [32/120] cc -Idipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -MF dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o.d -o dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -c dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so.p/bootstrap_direction_getter.c [33/120] cc -o dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [34/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/pmf.cpython-312-i386-linux-gnu.so.p/pmf.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/direction/pmf.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:57:40: Exception check after calling 'find_closest' will always require the GIL to be acquired. Declare 'find_closest' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:58:29: Exception check after calling 'get_pmf_c' will always require the GIL to be acquired. Declare 'get_pmf_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:83:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Possible solutions: 1. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:84:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:95:31: Exception check after calling 'find_closest' will always require the GIL to be acquired. Declare 'find_closest' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:97:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Possible solutions: 1. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:100:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:132:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Possible solutions: 1. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:133:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. [35/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so.p/probabilistic_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/direction/probabilistic_direction_getter.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/probabilistic_direction_getter.pyx:105:18: Exception check after calling 'cumsum' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cumsum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cumsum' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/probabilistic_direction_getter.pyx:184:26: Exception check after calling 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/probabilistic_direction_getter.pyx:189:26: Exception check after calling 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. [36/120] cc -Idipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -MF dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o.d -o dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -c dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so.p/enhancement_kernel.c [37/120] cc -o dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [38/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so.p/ptt_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/direction/ptt_direction_getter.pyx [39/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so.p/recspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/reconst/recspeed.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/reconst/recspeed.pyx:260:5: Exception check on '_cosort' will always require the GIL to be acquired. Possible solutions: 1. Declare '_cosort' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_cosort' to allow an error code to be returned. [40/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so.p/eudx_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/reconst/eudx_direction_getter.pyx [41/120] cc -Idipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -MF dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o.d -o dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -c dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so.p/closest_peak_direction_getter.c [42/120] cc -Idipy/align/transforms.cpython-312-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/transforms.cpython-312-i386-linux-gnu.so.p/meson-generated_transforms.c.o -MF dipy/align/transforms.cpython-312-i386-linux-gnu.so.p/meson-generated_transforms.c.o.d -o dipy/align/transforms.cpython-312-i386-linux-gnu.so.p/meson-generated_transforms.c.o -c dipy/align/transforms.cpython-312-i386-linux-gnu.so.p/transforms.c [43/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so.p/quick_squash.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/reconst/quick_squash.pyx [44/120] cc -o dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [45/120] cc -o dipy/align/transforms.cpython-312-i386-linux-gnu.so dipy/align/transforms.cpython-312-i386-linux-gnu.so.p/meson-generated_transforms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [46/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so.p/vec_val_sum.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/reconst/vec_val_sum.pyx [47/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so.p/clustering_algorithms.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/segment/clustering_algorithms.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:62:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:63:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:72:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:73:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:74:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:89:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:90:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:91:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. [48/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so.p/clusteringspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/segment/clusteringspeed.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:62:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:63:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:72:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:73:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:74:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:89:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:90:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:91:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:331:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:348:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:412:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:439:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:469:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:507:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:543:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:604:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:56:5: Exception check on 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:102:37: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:201:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:209:25: Exception check after calling '_update_node' will always require the GIL to be acquired. Possible solutions: 1. Declare '_update_node' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_update_node' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:240:48: Exception check after calling '_add_child' will always require the GIL to be acquired. Declare '_add_child' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:244:23: Exception check after calling '_insert_in' will always require the GIL to be acquired. Possible solutions: 1. Declare '_insert_in' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_insert_in' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:437:25: Exception check after calling 'c_assign' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_assign' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_assign' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:465:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:485:70: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:486:79: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:488:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:530:43: Exception check after calling 'c_size' will always require the GIL to be acquired. Declare 'c_size' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:566:68: Exception check after calling 'c_infer_shape' will always require the GIL to be acquired. Declare 'c_infer_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:569:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Possible solutions: 1. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:579:37: Exception check after calling 'c_extract' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_extract' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_extract' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:580:51: Exception check after calling 'find_nearest_cluster' will always require the GIL to be acquired. Declare 'find_nearest_cluster' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:584:41: Exception check after calling 'c_extract' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_extract' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_extract' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:585:60: Exception check after calling 'find_nearest_cluster' will always require the GIL to be acquired. Declare 'find_nearest_cluster' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:598:77: Exception check after calling 'c_size' will always require the GIL to be acquired. Declare 'c_size' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:601:30: Exception check after calling 'c_assign' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_assign' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_assign' to allow an error code to be returned. [49/120] cc -Idipy/align/parzenhist.cpython-312-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/parzenhist.cpython-312-i386-linux-gnu.so.p/meson-generated_parzenhist.c.o -MF dipy/align/parzenhist.cpython-312-i386-linux-gnu.so.p/meson-generated_parzenhist.c.o.d -o dipy/align/parzenhist.cpython-312-i386-linux-gnu.so.p/meson-generated_parzenhist.c.o -c dipy/align/parzenhist.cpython-312-i386-linux-gnu.so.p/parzenhist.c [50/120] cc -o dipy/align/parzenhist.cpython-312-i386-linux-gnu.so dipy/align/parzenhist.cpython-312-i386-linux-gnu.so.p/meson-generated_parzenhist.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [51/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so.p/cythonutils.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/segment/cythonutils.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/cythonutils.pyx:14:5: Exception check on 'shape_from_memview' will always require the GIL to be acquired. Declare 'shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/cythonutils.pxd:38:19: No exception value declared for 'same_shape' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/cythonutils.pxd:40:11: No exception value declared for 'create_memview_2d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/cythonutils.pyx:143:5: Exception check on 'free_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'free_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'free_memview_2d' to allow an error code to be returned. [52/120] cc -Idipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -MF dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o.d -o dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -c dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so.p/probabilistic_direction_getter.c [53/120] cc -o dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [54/120] cc -Idipy/align/expectmax.cpython-312-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/expectmax.cpython-312-i386-linux-gnu.so.p/meson-generated_expectmax.c.o -MF dipy/align/expectmax.cpython-312-i386-linux-gnu.so.p/meson-generated_expectmax.c.o.d -o dipy/align/expectmax.cpython-312-i386-linux-gnu.so.p/meson-generated_expectmax.c.o -c dipy/align/expectmax.cpython-312-i386-linux-gnu.so.p/expectmax.c [55/120] cc -o dipy/align/expectmax.cpython-312-i386-linux-gnu.so dipy/align/expectmax.cpython-312-i386-linux-gnu.so.p/meson-generated_expectmax.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [56/120] cc -Idipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -MF dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o.d -o dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -c dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so.p/eudx_direction_getter.c [57/120] cc -o dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [58/120] cc -Idipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so.p/meson-generated_quick_squash.c.o -MF dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so.p/meson-generated_quick_squash.c.o.d -o dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so.p/meson-generated_quick_squash.c.o -c dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so.p/quick_squash.c [59/120] cc -o dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so.p/meson-generated_quick_squash.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [60/120] cc -Idipy/direction/pmf.cpython-312-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/pmf.cpython-312-i386-linux-gnu.so.p/meson-generated_pmf.c.o -MF dipy/direction/pmf.cpython-312-i386-linux-gnu.so.p/meson-generated_pmf.c.o.d -o dipy/direction/pmf.cpython-312-i386-linux-gnu.so.p/meson-generated_pmf.c.o -c dipy/direction/pmf.cpython-312-i386-linux-gnu.so.p/pmf.c [61/120] cc -o dipy/direction/pmf.cpython-312-i386-linux-gnu.so dipy/direction/pmf.cpython-312-i386-linux-gnu.so.p/meson-generated_pmf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [62/120] cc -Idipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -MF dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so.p/meson-generated_vec_val_sum.c.o.d -o dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -c dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so.p/vec_val_sum.c [63/120] cc -o dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [64/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so.p/featurespeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/segment/featurespeed.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:39:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:52:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:177:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:180:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:207:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:212:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:228:83: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:236:90: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:263:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:271:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:293:80: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:301:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:318:88: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:326:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:178:33: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:208:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:213:30: Exception check after calling '__pyx_fuse_0c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_set_number_of_points' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:229:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:264:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:294:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:302:28: Exception check after calling '__pyx_fuse_0c_length' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_length' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:319:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. [65/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so.p/metricspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/segment/metricspeed.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:48:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:53:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:230:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:246:107: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:282:112: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:320:111: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:341:92: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:344:93: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:247:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Possible solutions: 1. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:342:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Possible solutions: 1. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. [66/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/mrf.cpython-312-i386-linux-gnu.so.p/mrf.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/segment/mrf.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:239:5: Exception check on '_initialize_param_uniform' will always require the GIL to be acquired. Possible solutions: 1. Declare '_initialize_param_uniform' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_initialize_param_uniform' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:284:5: Exception check on '_negloglikelihood' will always require the GIL to be acquired. Possible solutions: 1. Declare '_negloglikelihood' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_negloglikelihood' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:338:5: Exception check on '_prob_image' will always require the GIL to be acquired. Possible solutions: 1. Declare '_prob_image' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_prob_image' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:507:5: Exception check on '_initialize_maximum_likelihood' will always require the GIL to be acquired. Possible solutions: 1. Declare '_initialize_maximum_likelihood' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_initialize_maximum_likelihood' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:551:5: Exception check on '_icm_ising' will always require the GIL to be acquired. Possible solutions: 1. Declare '_icm_ising' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_icm_ising' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:633:5: Exception check on '_prob_class_given_neighb' will always require the GIL to be acquired. Possible solutions: 1. Declare '_prob_class_given_neighb' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_prob_class_given_neighb' to allow an error code to be returned. [67/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so.p/direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/tracking/direction_getter.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/direction_getter.pyx:32:5: Exception check on '_step_to_boundary' will always require the GIL to be acquired. Possible solutions: 1. Declare '_step_to_boundary' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_step_to_boundary' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/direction_getter.pyx:65:5: Exception check on '_fixed_step' will always require the GIL to be acquired. Possible solutions: 1. Declare '_fixed_step' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_fixed_step' to allow an error code to be returned. [68/120] cc -Idipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -MF dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o.d -o dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -c dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so.p/ptt_direction_getter.c [69/120] cc -o dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [70/120] cc -Idipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -MF dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so.p/meson-generated_sumsqdiff.c.o.d -o dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -c dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so.p/sumsqdiff.c [71/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so.p/fbcmeasures.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/tracking/fbcmeasures.pyx [72/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/distances.cpython-312-i386-linux-gnu.so.p/distances.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/tracking/distances.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:137:5: Exception check on 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:153:5: Exception check on 'cadd_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cadd_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cadd_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:167:5: Exception check on 'cmul_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cmul_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cmul_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:179:5: Exception check on 'cmul_3vec' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cmul_3vec' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cmul_3vec' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:689:5: Exception check on 'min_distances' will always require the GIL to be acquired. Possible solutions: 1. Declare 'min_distances' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'min_distances' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1445:5: Exception check on 'track_direct_flip_dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_dist' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1504:5: Exception check on 'track_direct_flip_3dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_3dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_3dist' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:661:17: Exception check after calling 'min_distances' will always require the GIL to be acquired. Possible solutions: 1. Declare 'min_distances' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'min_distances' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1387:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1388:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1389:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1668:38: Exception check after calling 'track_direct_flip_dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_dist' to allow an error code to be returned. [73/120] cc -o dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [74/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so.p/localtrack.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/tracking/localtrack.pyx [75/120] cc -Idipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -MF dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o.d -o dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -c dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so.p/clustering_algorithms.c [76/120] cc -o dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [77/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so.p/propspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/tracking/propspeed.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/propspeed.pxd:3:40: No exception value declared for '_propagation_direction' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/propspeed.pyx:186:32: Exception check after calling '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/propspeed.pyx:199:24: Exception check after calling 'offset' will always require the GIL to be acquired. Possible solutions: 1. Declare 'offset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/propspeed.pyx:251:16: Exception check after calling 'offset' will always require the GIL to be acquired. Possible solutions: 1. Declare 'offset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. [78/120] cc -Idipy/align/crosscorr.cpython-312-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/crosscorr.cpython-312-i386-linux-gnu.so.p/meson-generated_crosscorr.c.o -MF dipy/align/crosscorr.cpython-312-i386-linux-gnu.so.p/meson-generated_crosscorr.c.o.d -o dipy/align/crosscorr.cpython-312-i386-linux-gnu.so.p/meson-generated_crosscorr.c.o -c dipy/align/crosscorr.cpython-312-i386-linux-gnu.so.p/crosscorr.c [79/120] cc -o dipy/align/crosscorr.cpython-312-i386-linux-gnu.so dipy/align/crosscorr.cpython-312-i386-linux-gnu.so.p/meson-generated_crosscorr.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [80/120] cc -Idipy/segment/cythonutils.cpython-312-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so.p/meson-generated_cythonutils.c.o -MF dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so.p/meson-generated_cythonutils.c.o.d -o dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so.p/meson-generated_cythonutils.c.o -c dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so.p/cythonutils.c [81/120] cc -o dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so.p/meson-generated_cythonutils.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [82/120] cc -Idipy/reconst/recspeed.cpython-312-i386-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_recspeed.c.o -MF dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_recspeed.c.o.d -o dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_recspeed.c.o -c dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so.p/recspeed.c [83/120] cc -o dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_recspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [84/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/stopping_criterion.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/tracking/stopping_criterion.pyx [85/120] /usr/bin/cython -3 --fast-fail --output-file dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so.p/fast_numpy.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/utils/fast_numpy.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pxd:12:24: No exception value declared for 'where_to_insert' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:17:5: Exception check on 'cumsum' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cumsum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cumsum' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:26:5: Exception check on 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:33:5: Exception check on 'scalar_muliplication_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'scalar_muliplication_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'scalar_muliplication_point' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pxd:30:16: No exception value declared for 'norm' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pxd:33:15: No exception value declared for 'dot' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:70:5: Exception check on 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:89:5: Exception check on 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:111:5: Exception check on 'random_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_vector' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:129:5: Exception check on 'random_perpendicular_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_perpendicular_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_perpendicular_vector' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:151:6: Exception check on 'random_point_within_circle' will always require the GIL to be acquired. Declare 'random_point_within_circle' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pxd:55:19: No exception value declared for 'random' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:188:6: Exception check on 'seed' will always require the GIL to be acquired. Possible solutions: 1. Declare 'seed' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'seed' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:126:13: Exception check after calling 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:146:17: Exception check after calling 'random_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_vector' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:147:9: Exception check after calling 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:148:13: Exception check after calling 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. [86/120] cc -Idipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -MF dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_clusteringspeed.c.o.d -o dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -c dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so.p/clusteringspeed.c [87/120] cc -o dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [88/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so.p/streamlinespeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/tracking/streamlinespeed.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pxd:11:20: No exception value declared for 'c_length' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:33:5: Exception check on 'c_arclengths_from_arraysequence' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_arclengths_from_arraysequence' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_arclengths_from_arraysequence' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:182:5: Exception check on 'c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_arclengths' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:196:5: Exception check on 'c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_set_number_of_points' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:245:5: Exception check on 'c_set_number_of_points_from_arraysequence' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_set_number_of_points_from_arraysequence' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_set_number_of_points_from_arraysequence' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:206:16: Exception check after calling '__pyx_fuse_0c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_arclengths' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:206:16: Exception check after calling '__pyx_fuse_1c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1c_arclengths' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:260:30: Exception check after calling '__pyx_fuse_0c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_set_number_of_points' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:260:30: Exception check after calling '__pyx_fuse_1c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1c_set_number_of_points' to allow an error code to be returned. [89/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so.p/vox2track.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/tracking/vox2track.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/vox2track.pyx:171:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/vox2track.pyx:275:30: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/vox2track.pyx:314:30: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. [90/120] /usr/bin/cython -3 --fast-fail --output-file dipy/utils/omp.cpython-312-i386-linux-gnu.so.p/omp.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-5s29xgvy/dipy ../dipy/utils/omp.pyx [91/120] cc -Idipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so.p/meson-generated_fast_numpy.c.o -MF dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so.p/meson-generated_fast_numpy.c.o.d -o dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so.p/meson-generated_fast_numpy.c.o -c dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so.p/fast_numpy.c [92/120] cc -o dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so.p/meson-generated_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [93/120] cc -Idipy/utils/omp.cpython-312-i386-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/utils/omp.cpython-312-i386-linux-gnu.so.p/meson-generated_omp.c.o -MF dipy/utils/omp.cpython-312-i386-linux-gnu.so.p/meson-generated_omp.c.o.d -o dipy/utils/omp.cpython-312-i386-linux-gnu.so.p/meson-generated_omp.c.o -c dipy/utils/omp.cpython-312-i386-linux-gnu.so.p/omp.c [94/120] cc -o dipy/utils/omp.cpython-312-i386-linux-gnu.so dipy/utils/omp.cpython-312-i386-linux-gnu.so.p/meson-generated_omp.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [95/120] cc -Idipy/core/interpolation.cpython-312-i386-linux-gnu.so.p -Idipy/core -I../dipy/core -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/core/interpolation.cpython-312-i386-linux-gnu.so.p/meson-generated_interpolation.c.o -MF dipy/core/interpolation.cpython-312-i386-linux-gnu.so.p/meson-generated_interpolation.c.o.d -o dipy/core/interpolation.cpython-312-i386-linux-gnu.so.p/meson-generated_interpolation.c.o -c dipy/core/interpolation.cpython-312-i386-linux-gnu.so.p/interpolation.c [96/120] cc -o dipy/core/interpolation.cpython-312-i386-linux-gnu.so dipy/core/interpolation.cpython-312-i386-linux-gnu.so.p/meson-generated_interpolation.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [97/120] cc -Idipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_direction_getter.c.o -MF dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_direction_getter.c.o.d -o dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_direction_getter.c.o -c dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so.p/direction_getter.c [98/120] cc -o dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so.p/meson-generated_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [99/120] cc -Idipy/segment/mrf.cpython-312-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/mrf.cpython-312-i386-linux-gnu.so.p/meson-generated_mrf.c.o -MF dipy/segment/mrf.cpython-312-i386-linux-gnu.so.p/meson-generated_mrf.c.o.d -o dipy/segment/mrf.cpython-312-i386-linux-gnu.so.p/meson-generated_mrf.c.o -c dipy/segment/mrf.cpython-312-i386-linux-gnu.so.p/mrf.c [100/120] cc -o dipy/segment/mrf.cpython-312-i386-linux-gnu.so dipy/segment/mrf.cpython-312-i386-linux-gnu.so.p/meson-generated_mrf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [101/120] cc -Idipy/tracking/propspeed.cpython-312-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_propspeed.c.o -MF dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_propspeed.c.o.d -o dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_propspeed.c.o -c dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so.p/propspeed.c [102/120] cc -o dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_propspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [103/120] cc -Idipy/tracking/localtrack.cpython-312-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so.p/meson-generated_localtrack.c.o -MF dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so.p/meson-generated_localtrack.c.o.d -o dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so.p/meson-generated_localtrack.c.o -c dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so.p/localtrack.c [104/120] cc -o dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so.p/meson-generated_localtrack.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [105/120] cc -Idipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -MF dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so.p/meson-generated_fbcmeasures.c.o.d -o dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -c dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so.p/fbcmeasures.c [106/120] cc -o dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [107/120] cc -Idipy/segment/metricspeed.cpython-312-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_metricspeed.c.o -MF dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_metricspeed.c.o.d -o dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_metricspeed.c.o -c dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so.p/metricspeed.c [108/120] cc -Idipy/segment/featurespeed.cpython-312-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so.p/meson-generated_featurespeed.c.o -MF dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so.p/meson-generated_featurespeed.c.o.d -o dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so.p/meson-generated_featurespeed.c.o -c dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so.p/featurespeed.c [109/120] cc -o dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so.p/meson-generated_metricspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [110/120] cc -o dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so.p/meson-generated_featurespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [111/120] cc -Idipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -MF dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so.p/meson-generated_streamlinespeed.c.o.d -o dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -c dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so.p/streamlinespeed.c [112/120] cc -o dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [113/120] cc -Idipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -MF dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/meson-generated_stopping_criterion.c.o.d -o dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -c dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/stopping_criterion.c In file included from /usr/include/string.h:548, from /usr/include/python3.12/Python.h:26, from dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/stopping_criterion.c:16: In function 'memcpy', inlined from '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state' at dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/stopping_criterion.c:29853:3: /usr/include/i386-linux-gnu/bits/string_fortified.h:29:10: warning: '*(long long unsigned int *)(&__pyx_t_1[0])' may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/stopping_criterion.c: In function '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state': dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/stopping_criterion.c:29827:10: note: '*(long long unsigned int *)(&__pyx_t_1[0])' was declared here 29827 | double __pyx_t_1[1]; | ^~~~~~~~~ [114/120] cc -o dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [115/120] cc -Idipy/tracking/distances.cpython-312-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/distances.cpython-312-i386-linux-gnu.so.p/meson-generated_distances.c.o -MF dipy/tracking/distances.cpython-312-i386-linux-gnu.so.p/meson-generated_distances.c.o.d -o dipy/tracking/distances.cpython-312-i386-linux-gnu.so.p/meson-generated_distances.c.o -c dipy/tracking/distances.cpython-312-i386-linux-gnu.so.p/distances.c [116/120] cc -o dipy/tracking/distances.cpython-312-i386-linux-gnu.so dipy/tracking/distances.cpython-312-i386-linux-gnu.so.p/meson-generated_distances.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [117/120] cc -Idipy/tracking/vox2track.cpython-312-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.12 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so.p/meson-generated_vox2track.c.o -MF dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so.p/meson-generated_vox2track.c.o.d -o dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so.p/meson-generated_vox2track.c.o -c dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so.p/vox2track.c [118/120] cc -o dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so.p/meson-generated_vox2track.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [119/120] cc -Idipy/align/vector_fields.cpython-312-i386-linux-gnu.so.p -Idipy/align 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--outdir /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy --config-setting compile-args=--verbose --config-setting setup-args=--wrap-mode=nodownload --config-setting setup-args=--prefix=/usr --config-setting setup-args=--sysconfdir=/etc --config-setting setup-args=--localstatedir=/var --config-setting setup-args=--libdir=lib/i386-linux-gnu * Building wheel... + meson setup /build/reproducible-path/dipy-1.8.0 /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p -Dbuildtype=release -Db_ndebug=if-release -Db_vscrt=md --wrap-mode=nodownload --prefix=/usr --sysconfdir=/etc --localstatedir=/var --libdir=lib/i386-linux-gnu --native-file=/build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/meson-python-native-file.ini The Meson build system Version: 1.2.3 Source dir: /build/reproducible-path/dipy-1.8.0 Build dir: /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p Build type: native build Project name: dipy Project version: 1.8.0 C compiler for the host machine: cc (gcc 13.2.0 "cc (Debian 13.2.0-24) 13.2.0") C linker for the host machine: cc ld.bfd 2.42 C++ compiler for the host machine: c++ (gcc 13.2.0 "c++ (Debian 13.2.0-24) 13.2.0") C++ linker for the host machine: c++ ld.bfd 2.42 Cython compiler for the host machine: cython (cython 3.0.10) Host machine cpu family: x86 Host machine cpu: i686 Program python found: YES (/usr/bin/python3.11) Did not find pkg-config by name 'pkg-config' Found Pkg-config: NO Run-time dependency python found: YES 3.11 Program cython found: YES (/usr/bin/cython) Library m found: YES Compiler for C supports arguments -Wno-maybe-uninitialized: YES Compiler for C supports arguments -Wno-discarded-qualifiers: YES Compiler for C supports arguments -Wno-empty-body: YES Compiler for C supports arguments -Wno-implicit-function-declaration: YES Compiler for C supports arguments -Wno-parentheses: YES Compiler for C supports arguments -Wno-switch: YES Compiler for C supports arguments -Wno-unused-label: YES Compiler for C supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-cpp: YES Compiler for C++ supports arguments -Wno-deprecated-declarations: YES Compiler for C++ supports arguments -Wno-class-memaccess: YES Compiler for C++ supports arguments -Wno-format-truncation: YES Compiler for C++ supports arguments -Wno-format-extra-args: YES Compiler for C++ supports arguments -Wno-format: NO Compiler for C++ supports arguments -Wno-non-virtual-dtor: YES Compiler for C++ supports arguments -Wno-sign-compare: YES Compiler for C++ supports arguments -Wno-switch: YES Compiler for C++ supports arguments -Wno-terminate: YES Compiler for C++ supports arguments -Wno-unused-but-set-variable: YES Compiler for C++ supports arguments -Wno-unused-function: YES Compiler for C++ supports arguments -Wno-unused-local-typedefs: YES Compiler for C++ supports arguments -Wno-unused-variable: YES Compiler for C++ supports arguments -Wno-int-in-bool-context: YES Run-time dependency OpenMP found: YES 4.5 Checking if "SSE intrinsics" compiles: NO Checking if "compiler supports SSE4.1 intrinsics" : links: NO Checking if "compiler supports AVX intrinsics" : links: NO Checking if "ARM NEON intrinsics" compiles: NO Build targets in project: 44 dipy 1.8.0 User defined options Native files : /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/meson-python-native-file.ini buildtype : release libdir : lib/i386-linux-gnu localstatedir: /var prefix : /usr sysconfdir : /etc wrap_mode : nodownload b_ndebug : if-release b_vscrt : md Found ninja-1.11.1 at /usr/bin/ninja Generating targets: 0%| | 0/44 eta ? Generating targets: 34%|███▍ | 15/44 eta 00:00 Generating targets: 91%|█████████ | 40/44 eta 00:00 Writing build.ninja: 0%| | 0/184 eta ? + /usr/bin/ninja --verbose [1/120] /usr/bin/python3.11 ../dipy/../tools/version_utils.py --source-root .. [2/120] /usr/bin/meson --internal copy ../dipy/../src/cythonutils.h dipy/cythonutils.h [3/120] /usr/bin/meson --internal copy ../dipy/__init__.py dipy/__init__.py [4/120] /usr/bin/meson --internal copy ../dipy/../src/dpy_math.h dipy/dpy_math.h [5/120] /usr/bin/meson --internal copy ../dipy/../src/conditional_omp.h dipy/conditional_omp.h [6/120] /usr/bin/meson --internal copy ../dipy/../src/safe_openmp.pxd dipy/safe_openmp.pxd [7/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so.p/bootstrap_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/direction/bootstrap_direction_getter.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/direction/bootstrap_direction_getter.pyx:153:20: Use boundscheck(False) for faster access [8/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so.p/shift_twist_convolution.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/denoise/shift_twist_convolution.pyx [9/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/bundlemin.cpython-311-i386-linux-gnu.so.p/bundlemin.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/align/bundlemin.pyx [10/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so.p/closest_peak_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/direction/closest_peak_direction_getter.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/closest_peak_direction_getter.pyx:108:36: Exception check after calling 'get_pmf_c' will always require the GIL to be acquired. Declare 'get_pmf_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [11/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so.p/nlmeans_block.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/denoise/nlmeans_block.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:74:5: Exception check on '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:120:5: Exception check on '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:428:38: Exception check after calling '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:430:36: Exception check after calling '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:453:54: Exception check after calling '_average_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_average_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_average_block' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/nlmeans_block.pyx:458:40: Exception check after calling '_value_block' will always require the GIL to be acquired. Possible solutions: 1. Declare '_value_block' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_value_block' to allow an error code to be returned. [12/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so.p/pca_noise_estimate.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/denoise/pca_noise_estimate.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/denoise/pca_noise_estimate.pyx:95:49: the result of using negative indices inside of code sections marked as 'wraparound=False' is undefined [13/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so.p/enhancement_kernel.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/denoise/enhancement_kernel.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/enhancement_kernel.pyx:399:5: Exception check on 'euler_angles' will always require the GIL to be acquired. Declare 'euler_angles' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/enhancement_kernel.pyx:444:5: Exception check on 'R' will always require the GIL to be acquired. Declare 'R' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/enhancement_kernel.pyx:206:67: Exception check after calling 'k2' will always require the GIL to be acquired. Declare 'k2' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/denoise/enhancement_kernel.pyx:247:30: Exception check after calling 'k2' will always require the GIL to be acquired. Declare 'k2' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [14/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/transforms.cpython-311-i386-linux-gnu.so.p/transforms.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/align/transforms.pyx [15/120] /usr/bin/cython -3 --fast-fail --output-file dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so.p/denspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/denoise/denspeed.pyx [16/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/parzenhist.cpython-311-i386-linux-gnu.so.p/parzenhist.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/align/parzenhist.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:923:59: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:923:59: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1035:63: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1035:63: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1125:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1125:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1216:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/parzenhist.pyx:1216:55: Exception check after calling '_jacobian' will always require the GIL to be acquired. Declare '_jacobian' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. [17/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/expectmax.cpython-311-i386-linux-gnu.so.p/expectmax.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/align/expectmax.pyx [18/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/crosscorr.cpython-311-i386-linux-gnu.so.p/crosscorr.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/align/crosscorr.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:56:5: Exception check on '_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:204:35: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:244:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:247:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:250:47: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:253:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:256:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:259:43: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:263:39: Exception check after calling '__pyx_fuse_0_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:204:35: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:244:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:247:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:250:47: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:253:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:256:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:259:43: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/crosscorr.pyx:263:39: Exception check after calling '__pyx_fuse_1_update_factors' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_update_factors' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_update_factors' to allow an error code to be returned. [19/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so.p/sumsqdiff.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/align/sumsqdiff.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/sumsqdiff.pyx:15:5: Exception check on '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/sumsqdiff.pyx:274:61: Exception check after calling '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/sumsqdiff.pyx:274:61: Exception check after calling '_solve_2d_symmetric_positive_definite' will always require the GIL to be acquired. Possible solutions: 1. Declare '_solve_2d_symmetric_positive_definite' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_solve_2d_symmetric_positive_definite' to allow an error code to be returned. [20/120] /usr/bin/cython -3 --fast-fail --output-file dipy/core/interpolation.cpython-311-i386-linux-gnu.so.p/interpolation.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/core/interpolation.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:33:24: No exception value declared for 'offset' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pyx:117:5: Exception check on 'splitoffset' will always require the GIL to be acquired. Possible solutions: 1. Declare 'splitoffset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'splitoffset' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pyx:245:5: Exception check on '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:10:34: No exception value declared for 'trilinear_interpolate4d_c' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:15:31: No exception value declared for '_interpolate_vector_2d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:17:31: No exception value declared for '_interpolate_scalar_2d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:19:34: No exception value declared for '_interpolate_scalar_nn_2d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:21:34: No exception value declared for '_interpolate_scalar_nn_3d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:24:31: No exception value declared for '_interpolate_scalar_3d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pxd:27:31: No exception value declared for '_interpolate_vector_3d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/core/interpolation.pyx:233:40: Exception check after calling '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. [21/120] /usr/bin/cython -3 --fast-fail --output-file dipy/align/vector_fields.cpython-311-i386-linux-gnu.so.p/vector_fields.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/align/vector_fields.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:35:5: Exception check on '_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:234:5: Exception check on '_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:144:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:144:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:351:57: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:351:57: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:525:47: Exception check after calling '__pyx_fuse_0_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:525:47: Exception check after calling '__pyx_fuse_1_compose_vector_fields_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_compose_vector_fields_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_compose_vector_fields_2d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:631:47: Exception check after calling '__pyx_fuse_0_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:631:47: Exception check after calling '__pyx_fuse_1_compose_vector_fields_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_compose_vector_fields_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1_compose_vector_fields_3d' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:760:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:760:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:886:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:886:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1238:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1238:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1308:53: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1308:53: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1422:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1452:61: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1422:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1452:61: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1519:61: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1519:61: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_0_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1622:65: Exception check after calling '__pyx_fuse_1_interpolate_vector_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1652:62: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1717:53: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1811:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1834:48: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1811:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1834:48: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1894:48: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1894:48: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_0_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:1988:52: Exception check after calling '__pyx_fuse_1_interpolate_vector_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_vector_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2011:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_0_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_1_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_2_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_2_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_3_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_3_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_4_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_4_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_5_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_5_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2071:49: Exception check after calling '__pyx_fuse_6_interpolate_scalar_nn_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_6_interpolate_scalar_nn_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2607:66: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2623:66: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2607:66: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2623:66: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2693:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2709:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2693:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2709:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_3d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_3d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2780:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2792:62: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2780:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2792:62: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2856:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2868:58: Exception check after calling '__pyx_fuse_0_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2856:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/align/vector_fields.pyx:2868:58: Exception check after calling '__pyx_fuse_1_interpolate_scalar_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1_interpolate_scalar_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. [22/120] cc -Idipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -MF dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o.d -o dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -c dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so.p/shift_twist_convolution.c [23/120] cc -o dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so.p/meson-generated_shift_twist_convolution.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [24/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/pmf.cpython-311-i386-linux-gnu.so.p/pmf.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/direction/pmf.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:57:40: Exception check after calling 'find_closest' will always require the GIL to be acquired. Declare 'find_closest' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:58:29: Exception check after calling 'get_pmf_c' will always require the GIL to be acquired. Declare 'get_pmf_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:83:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Possible solutions: 1. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:84:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:95:31: Exception check after calling 'find_closest' will always require the GIL to be acquired. Declare 'find_closest' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:97:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Possible solutions: 1. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:100:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:132:36: Exception check after calling 'trilinear_interpolate4d_c' will always require the GIL to be acquired. Possible solutions: 1. Declare 'trilinear_interpolate4d_c' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/pmf.pyx:133:30: Exception check after calling '_PmfGen__clear_pmf' will always require the GIL to be acquired. Possible solutions: 1. Declare '_PmfGen__clear_pmf' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_PmfGen__clear_pmf' to allow an error code to be returned. [25/120] cc -Idipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -MF dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so.p/meson-generated_nlmeans_block.c.o.d -o dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -c dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so.p/nlmeans_block.c [26/120] cc -o dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so.p/meson-generated_nlmeans_block.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [27/120] cc -Idipy/denoise/denspeed.cpython-311-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_denspeed.c.o -MF dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_denspeed.c.o.d -o dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_denspeed.c.o -c dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so.p/denspeed.c [28/120] cc -o dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_denspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [29/120] cc -Idipy/align/bundlemin.cpython-311-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/bundlemin.cpython-311-i386-linux-gnu.so.p/meson-generated_bundlemin.c.o -MF dipy/align/bundlemin.cpython-311-i386-linux-gnu.so.p/meson-generated_bundlemin.c.o.d -o dipy/align/bundlemin.cpython-311-i386-linux-gnu.so.p/meson-generated_bundlemin.c.o -c dipy/align/bundlemin.cpython-311-i386-linux-gnu.so.p/bundlemin.c [30/120] cc -o dipy/align/bundlemin.cpython-311-i386-linux-gnu.so dipy/align/bundlemin.cpython-311-i386-linux-gnu.so.p/meson-generated_bundlemin.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [31/120] cc -Idipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -MF dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o.d -o dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -c dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so.p/closest_peak_direction_getter.c [32/120] cc -o dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_closest_peak_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [33/120] cc -Idipy/align/transforms.cpython-311-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/transforms.cpython-311-i386-linux-gnu.so.p/meson-generated_transforms.c.o -MF dipy/align/transforms.cpython-311-i386-linux-gnu.so.p/meson-generated_transforms.c.o.d -o dipy/align/transforms.cpython-311-i386-linux-gnu.so.p/meson-generated_transforms.c.o -c dipy/align/transforms.cpython-311-i386-linux-gnu.so.p/transforms.c [34/120] cc -o dipy/align/transforms.cpython-311-i386-linux-gnu.so dipy/align/transforms.cpython-311-i386-linux-gnu.so.p/meson-generated_transforms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [35/120] cc -Idipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -MF dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o.d -o dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -c dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so.p/pca_noise_estimate.c [36/120] cc -o dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so.p/meson-generated_pca_noise_estimate.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [37/120] cc -Idipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -MF dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o.d -o dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -c dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so.p/bootstrap_direction_getter.c [38/120] cc -o dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_bootstrap_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [39/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so.p/probabilistic_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/direction/probabilistic_direction_getter.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/probabilistic_direction_getter.pyx:105:18: Exception check after calling 'cumsum' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cumsum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cumsum' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/probabilistic_direction_getter.pyx:184:26: Exception check after calling 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/direction/probabilistic_direction_getter.pyx:189:26: Exception check after calling 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. [40/120] cc -Idipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so.p -Idipy/denoise -I../dipy/denoise -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -MF dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o.d -o dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -c dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so.p/enhancement_kernel.c [41/120] cc -o dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so.p/meson-generated_enhancement_kernel.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [42/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so.p/eudx_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/reconst/eudx_direction_getter.pyx [43/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so.p/quick_squash.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/reconst/quick_squash.pyx [44/120] /usr/bin/cython -3 --fast-fail --output-file dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so.p/ptt_direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/direction/ptt_direction_getter.pyx [45/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so.p/recspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/reconst/recspeed.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/reconst/recspeed.pyx:260:5: Exception check on '_cosort' will always require the GIL to be acquired. Possible solutions: 1. Declare '_cosort' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_cosort' to allow an error code to be returned. [46/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so.p/clustering_algorithms.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/segment/clustering_algorithms.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:62:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:63:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:72:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:73:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:74:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:89:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:90:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:91:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. [47/120] /usr/bin/cython -3 --fast-fail --output-file dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so.p/vec_val_sum.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/reconst/vec_val_sum.pyx [48/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so.p/clusteringspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/segment/clusteringspeed.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:62:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:63:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:72:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:73:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:74:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:89:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:90:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pxd:91:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:331:100: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:348:60: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:412:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:439:85: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:469:68: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:507:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:543:91: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:604:75: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:56:5: Exception check on 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:102:37: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:201:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:209:25: Exception check after calling '_update_node' will always require the GIL to be acquired. Possible solutions: 1. Declare '_update_node' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_update_node' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:240:48: Exception check after calling '_add_child' will always require the GIL to be acquired. Declare '_add_child' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:244:23: Exception check after calling '_insert_in' will always require the GIL to be acquired. Possible solutions: 1. Declare '_insert_in' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_insert_in' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:437:25: Exception check after calling 'c_assign' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_assign' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_assign' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:465:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:485:70: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:486:79: Exception check after calling 'create_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'create_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:488:21: Exception check after calling 'aabb_creation' will always require the GIL to be acquired. Possible solutions: 1. Declare 'aabb_creation' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'aabb_creation' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:530:43: Exception check after calling 'c_size' will always require the GIL to be acquired. Declare 'c_size' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:566:68: Exception check after calling 'c_infer_shape' will always require the GIL to be acquired. Declare 'c_infer_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:569:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Possible solutions: 1. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:579:37: Exception check after calling 'c_extract' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_extract' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_extract' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:580:51: Exception check after calling 'find_nearest_cluster' will always require the GIL to be acquired. Declare 'find_nearest_cluster' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:584:41: Exception check after calling 'c_extract' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_extract' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_extract' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:585:60: Exception check after calling 'find_nearest_cluster' will always require the GIL to be acquired. Declare 'find_nearest_cluster' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:598:77: Exception check after calling 'c_size' will always require the GIL to be acquired. Declare 'c_size' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/clusteringspeed.pyx:601:30: Exception check after calling 'c_assign' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_assign' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_assign' to allow an error code to be returned. [49/120] cc -Idipy/align/parzenhist.cpython-311-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/parzenhist.cpython-311-i386-linux-gnu.so.p/meson-generated_parzenhist.c.o -MF dipy/align/parzenhist.cpython-311-i386-linux-gnu.so.p/meson-generated_parzenhist.c.o.d -o dipy/align/parzenhist.cpython-311-i386-linux-gnu.so.p/meson-generated_parzenhist.c.o -c dipy/align/parzenhist.cpython-311-i386-linux-gnu.so.p/parzenhist.c [50/120] cc -o dipy/align/parzenhist.cpython-311-i386-linux-gnu.so dipy/align/parzenhist.cpython-311-i386-linux-gnu.so.p/meson-generated_parzenhist.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [51/120] cc -Idipy/align/expectmax.cpython-311-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/expectmax.cpython-311-i386-linux-gnu.so.p/meson-generated_expectmax.c.o -MF dipy/align/expectmax.cpython-311-i386-linux-gnu.so.p/meson-generated_expectmax.c.o.d -o dipy/align/expectmax.cpython-311-i386-linux-gnu.so.p/meson-generated_expectmax.c.o -c dipy/align/expectmax.cpython-311-i386-linux-gnu.so.p/expectmax.c [52/120] cc -o dipy/align/expectmax.cpython-311-i386-linux-gnu.so dipy/align/expectmax.cpython-311-i386-linux-gnu.so.p/meson-generated_expectmax.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [53/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so.p/cythonutils.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/segment/cythonutils.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/cythonutils.pyx:14:5: Exception check on 'shape_from_memview' will always require the GIL to be acquired. Declare 'shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/cythonutils.pxd:38:19: No exception value declared for 'same_shape' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/cythonutils.pxd:40:11: No exception value declared for 'create_memview_2d' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/cythonutils.pyx:143:5: Exception check on 'free_memview_2d' will always require the GIL to be acquired. Possible solutions: 1. Declare 'free_memview_2d' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'free_memview_2d' to allow an error code to be returned. [54/120] cc -Idipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -MF dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o.d -o dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -c dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so.p/probabilistic_direction_getter.c [55/120] cc -o dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_probabilistic_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [56/120] cc -Idipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -MF dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o.d -o dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -c dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so.p/eudx_direction_getter.c [57/120] cc -o dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_eudx_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [58/120] cc -Idipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -MF dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so.p/meson-generated_vec_val_sum.c.o.d -o dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -c dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so.p/vec_val_sum.c [59/120] cc -Idipy/direction/pmf.cpython-311-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/pmf.cpython-311-i386-linux-gnu.so.p/meson-generated_pmf.c.o -MF dipy/direction/pmf.cpython-311-i386-linux-gnu.so.p/meson-generated_pmf.c.o.d -o dipy/direction/pmf.cpython-311-i386-linux-gnu.so.p/meson-generated_pmf.c.o -c dipy/direction/pmf.cpython-311-i386-linux-gnu.so.p/pmf.c [60/120] cc -o dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so.p/meson-generated_vec_val_sum.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [61/120] cc -o dipy/direction/pmf.cpython-311-i386-linux-gnu.so dipy/direction/pmf.cpython-311-i386-linux-gnu.so.p/meson-generated_pmf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [62/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so.p/featurespeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/segment/featurespeed.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:39:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:52:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:177:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:180:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:207:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:212:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:228:83: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:236:90: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:263:79: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:271:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:293:80: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:301:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:318:88: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:326:95: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:178:33: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:208:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:213:30: Exception check after calling '__pyx_fuse_0c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_set_number_of_points' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:229:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:264:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:294:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:302:28: Exception check after calling '__pyx_fuse_0c_length' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_length' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pyx:319:45: Exception check after calling '__pyx_fuse_1shape_from_memview' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1shape_from_memview' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. [63/120] cc -Idipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so.p/meson-generated_quick_squash.c.o -MF dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so.p/meson-generated_quick_squash.c.o.d -o dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so.p/meson-generated_quick_squash.c.o -c dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so.p/quick_squash.c [64/120] cc -o dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so.p/meson-generated_quick_squash.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [65/120] cc -Idipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -MF dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so.p/meson-generated_sumsqdiff.c.o.d -o dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -c dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so.p/sumsqdiff.c [66/120] cc -Idipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -MF dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o.d -o dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -c dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so.p/clustering_algorithms.c [67/120] cc -o dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so.p/meson-generated_sumsqdiff.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [68/120] cc -o dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so.p/meson-generated_clustering_algorithms.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [69/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so.p/metricspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/segment/metricspeed.pyx warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:9:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pxd:10:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:7:71: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/featurespeed.pxd:8:78: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:48:86: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:53:87: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:230:108: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:246:107: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:282:112: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:320:111: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:341:92: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. warning: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:344:93: The keyword 'nogil' should appear at the end of the function signature line. Placing it before 'except' or 'noexcept' will be disallowed in a future version of Cython. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:247:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Possible solutions: 1. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/metricspeed.pyx:342:25: Exception check after calling 'same_shape' will always require the GIL to be acquired. Possible solutions: 1. Declare 'same_shape' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. [70/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/distances.cpython-311-i386-linux-gnu.so.p/distances.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/tracking/distances.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:137:5: Exception check on 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:153:5: Exception check on 'cadd_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cadd_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cadd_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:167:5: Exception check on 'cmul_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cmul_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cmul_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:179:5: Exception check on 'cmul_3vec' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cmul_3vec' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cmul_3vec' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:689:5: Exception check on 'min_distances' will always require the GIL to be acquired. Possible solutions: 1. Declare 'min_distances' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'min_distances' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1445:5: Exception check on 'track_direct_flip_dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_dist' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1504:5: Exception check on 'track_direct_flip_3dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_3dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_3dist' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:661:17: Exception check after calling 'min_distances' will always require the GIL to be acquired. Possible solutions: 1. Declare 'min_distances' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'min_distances' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1387:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1388:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1389:14: Exception check after calling 'csub_3vecs' will always require the GIL to be acquired. Possible solutions: 1. Declare 'csub_3vecs' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'csub_3vecs' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/distances.pyx:1668:38: Exception check after calling 'track_direct_flip_dist' will always require the GIL to be acquired. Possible solutions: 1. Declare 'track_direct_flip_dist' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'track_direct_flip_dist' to allow an error code to be returned. [71/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so.p/direction_getter.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/tracking/direction_getter.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/direction_getter.pyx:32:5: Exception check on '_step_to_boundary' will always require the GIL to be acquired. Possible solutions: 1. Declare '_step_to_boundary' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_step_to_boundary' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/direction_getter.pyx:65:5: Exception check on '_fixed_step' will always require the GIL to be acquired. Possible solutions: 1. Declare '_fixed_step' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_fixed_step' to allow an error code to be returned. [72/120] /usr/bin/cython -3 --fast-fail --output-file dipy/segment/mrf.cpython-311-i386-linux-gnu.so.p/mrf.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/segment/mrf.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:239:5: Exception check on '_initialize_param_uniform' will always require the GIL to be acquired. Possible solutions: 1. Declare '_initialize_param_uniform' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_initialize_param_uniform' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:284:5: Exception check on '_negloglikelihood' will always require the GIL to be acquired. Possible solutions: 1. Declare '_negloglikelihood' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_negloglikelihood' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:338:5: Exception check on '_prob_image' will always require the GIL to be acquired. Possible solutions: 1. Declare '_prob_image' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_prob_image' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:507:5: Exception check on '_initialize_maximum_likelihood' will always require the GIL to be acquired. Possible solutions: 1. Declare '_initialize_maximum_likelihood' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_initialize_maximum_likelihood' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:551:5: Exception check on '_icm_ising' will always require the GIL to be acquired. Possible solutions: 1. Declare '_icm_ising' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_icm_ising' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/segment/mrf.pyx:633:5: Exception check on '_prob_class_given_neighb' will always require the GIL to be acquired. Possible solutions: 1. Declare '_prob_class_given_neighb' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_prob_class_given_neighb' to allow an error code to be returned. [73/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so.p/fbcmeasures.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/tracking/fbcmeasures.pyx [74/120] cc -Idipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so.p -Idipy/direction -I../dipy/direction -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -MF dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o.d -o dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -c dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so.p/ptt_direction_getter.c [75/120] cc -o dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_ptt_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [76/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so.p/propspeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/tracking/propspeed.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/propspeed.pxd:3:40: No exception value declared for '_propagation_direction' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/propspeed.pyx:186:32: Exception check after calling '_trilinear_interpolation_iso' will always require the GIL to be acquired. Possible solutions: 1. Declare '_trilinear_interpolation_iso' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '_trilinear_interpolation_iso' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/propspeed.pyx:199:24: Exception check after calling 'offset' will always require the GIL to be acquired. Possible solutions: 1. Declare 'offset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/propspeed.pyx:251:16: Exception check after calling 'offset' will always require the GIL to be acquired. Possible solutions: 1. Declare 'offset' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Declare any exception value explicitly for functions in pxd files. [77/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so.p/localtrack.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/tracking/localtrack.pyx [78/120] cc -Idipy/align/crosscorr.cpython-311-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/crosscorr.cpython-311-i386-linux-gnu.so.p/meson-generated_crosscorr.c.o -MF dipy/align/crosscorr.cpython-311-i386-linux-gnu.so.p/meson-generated_crosscorr.c.o.d -o dipy/align/crosscorr.cpython-311-i386-linux-gnu.so.p/meson-generated_crosscorr.c.o -c dipy/align/crosscorr.cpython-311-i386-linux-gnu.so.p/crosscorr.c [79/120] cc -o dipy/align/crosscorr.cpython-311-i386-linux-gnu.so dipy/align/crosscorr.cpython-311-i386-linux-gnu.so.p/meson-generated_crosscorr.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [80/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/stopping_criterion.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/tracking/stopping_criterion.pyx [81/120] cc -Idipy/segment/cythonutils.cpython-311-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so.p/meson-generated_cythonutils.c.o -MF dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so.p/meson-generated_cythonutils.c.o.d -o dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so.p/meson-generated_cythonutils.c.o -c dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so.p/cythonutils.c [82/120] cc -o dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so.p/meson-generated_cythonutils.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [83/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so.p/streamlinespeed.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/tracking/streamlinespeed.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pxd:11:20: No exception value declared for 'c_length' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:33:5: Exception check on 'c_arclengths_from_arraysequence' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_arclengths_from_arraysequence' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_arclengths_from_arraysequence' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:182:5: Exception check on 'c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_arclengths' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:196:5: Exception check on 'c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_set_number_of_points' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:245:5: Exception check on 'c_set_number_of_points_from_arraysequence' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_set_number_of_points_from_arraysequence' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_set_number_of_points_from_arraysequence' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:206:16: Exception check after calling '__pyx_fuse_0c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_arclengths' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:206:16: Exception check after calling '__pyx_fuse_1c_arclengths' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1c_arclengths' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1c_arclengths' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:260:30: Exception check after calling '__pyx_fuse_0c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_0c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_0c_set_number_of_points' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/streamlinespeed.pyx:260:30: Exception check after calling '__pyx_fuse_1c_set_number_of_points' will always require the GIL to be acquired. Possible solutions: 1. Declare '__pyx_fuse_1c_set_number_of_points' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on '__pyx_fuse_1c_set_number_of_points' to allow an error code to be returned. [84/120] cc -Idipy/reconst/recspeed.cpython-311-i386-linux-gnu.so.p -Idipy/reconst -I../dipy/reconst -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_recspeed.c.o -MF dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_recspeed.c.o.d -o dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_recspeed.c.o -c dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so.p/recspeed.c [85/120] cc -Idipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -MF dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_clusteringspeed.c.o.d -o dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -c dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so.p/clusteringspeed.c [86/120] cc -o dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_recspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [87/120] cc -o dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_clusteringspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [88/120] /usr/bin/cython -3 --fast-fail --output-file dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so.p/vox2track.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/tracking/vox2track.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/vox2track.pyx:171:5: Exception check on 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/vox2track.pyx:275:30: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/tracking/vox2track.pyx:314:30: Exception check after calling 'c_get_closest_edge' will always require the GIL to be acquired. Possible solutions: 1. Declare 'c_get_closest_edge' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'c_get_closest_edge' to allow an error code to be returned. [89/120] /usr/bin/cython -3 --fast-fail --output-file dipy/utils/omp.cpython-311-i386-linux-gnu.so.p/omp.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/utils/omp.pyx [90/120] /usr/bin/cython -3 --fast-fail --output-file dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so.p/fast_numpy.c --include-dir /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy ../dipy/utils/fast_numpy.pyx performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pxd:12:24: No exception value declared for 'where_to_insert' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:17:5: Exception check on 'cumsum' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cumsum' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cumsum' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:26:5: Exception check on 'copy_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'copy_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'copy_point' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:33:5: Exception check on 'scalar_muliplication_point' will always require the GIL to be acquired. Possible solutions: 1. Declare 'scalar_muliplication_point' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'scalar_muliplication_point' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pxd:30:16: No exception value declared for 'norm' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pxd:33:15: No exception value declared for 'dot' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:70:5: Exception check on 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:89:5: Exception check on 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:111:5: Exception check on 'random_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_vector' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:129:5: Exception check on 'random_perpendicular_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_perpendicular_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_perpendicular_vector' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:151:6: Exception check on 'random_point_within_circle' will always require the GIL to be acquired. Declare 'random_point_within_circle' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pxd:55:19: No exception value declared for 'random' in pxd file. Users cimporting this function and calling it without the gil will always require an exception check. Suggest adding an explicit exception value. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:188:6: Exception check on 'seed' will always require the GIL to be acquired. Possible solutions: 1. Declare 'seed' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'seed' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:126:13: Exception check after calling 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:146:17: Exception check after calling 'random_vector' will always require the GIL to be acquired. Possible solutions: 1. Declare 'random_vector' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'random_vector' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:147:9: Exception check after calling 'cross' will always require the GIL to be acquired. Possible solutions: 1. Declare 'cross' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'cross' to allow an error code to be returned. performance hint: /build/reproducible-path/dipy-1.8.0/dipy/utils/fast_numpy.pyx:148:13: Exception check after calling 'normalize' will always require the GIL to be acquired. Possible solutions: 1. Declare 'normalize' as 'noexcept' if you control the definition and you're sure you don't want the function to raise exceptions. 2. Use an 'int' return type on 'normalize' to allow an error code to be returned. [91/120] cc -Idipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so.p/meson-generated_fast_numpy.c.o -MF dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so.p/meson-generated_fast_numpy.c.o.d -o dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so.p/meson-generated_fast_numpy.c.o -c dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so.p/fast_numpy.c [92/120] cc -o dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so.p/meson-generated_fast_numpy.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [93/120] cc -Idipy/utils/omp.cpython-311-i386-linux-gnu.so.p -Idipy/utils -I../dipy/utils -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/utils/omp.cpython-311-i386-linux-gnu.so.p/meson-generated_omp.c.o -MF dipy/utils/omp.cpython-311-i386-linux-gnu.so.p/meson-generated_omp.c.o.d -o dipy/utils/omp.cpython-311-i386-linux-gnu.so.p/meson-generated_omp.c.o -c dipy/utils/omp.cpython-311-i386-linux-gnu.so.p/omp.c [94/120] cc -o dipy/utils/omp.cpython-311-i386-linux-gnu.so dipy/utils/omp.cpython-311-i386-linux-gnu.so.p/meson-generated_omp.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [95/120] cc -Idipy/core/interpolation.cpython-311-i386-linux-gnu.so.p -Idipy/core -I../dipy/core -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/core/interpolation.cpython-311-i386-linux-gnu.so.p/meson-generated_interpolation.c.o -MF dipy/core/interpolation.cpython-311-i386-linux-gnu.so.p/meson-generated_interpolation.c.o.d -o dipy/core/interpolation.cpython-311-i386-linux-gnu.so.p/meson-generated_interpolation.c.o -c dipy/core/interpolation.cpython-311-i386-linux-gnu.so.p/interpolation.c [96/120] cc -o dipy/core/interpolation.cpython-311-i386-linux-gnu.so dipy/core/interpolation.cpython-311-i386-linux-gnu.so.p/meson-generated_interpolation.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [97/120] cc -Idipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_direction_getter.c.o -MF dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_direction_getter.c.o.d -o dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_direction_getter.c.o -c dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so.p/direction_getter.c [98/120] cc -o dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so.p/meson-generated_direction_getter.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [99/120] cc -Idipy/tracking/propspeed.cpython-311-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_propspeed.c.o -MF dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_propspeed.c.o.d -o dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_propspeed.c.o -c dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so.p/propspeed.c [100/120] cc -o dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_propspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [101/120] cc -Idipy/segment/featurespeed.cpython-311-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so.p/meson-generated_featurespeed.c.o -MF dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so.p/meson-generated_featurespeed.c.o.d -o dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so.p/meson-generated_featurespeed.c.o -c dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so.p/featurespeed.c [102/120] cc -o dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so.p/meson-generated_featurespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [103/120] cc -Idipy/tracking/localtrack.cpython-311-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so.p/meson-generated_localtrack.c.o -MF dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so.p/meson-generated_localtrack.c.o.d -o dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so.p/meson-generated_localtrack.c.o -c dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so.p/localtrack.c [104/120] cc -o dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so.p/meson-generated_localtrack.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [105/120] cc -Idipy/segment/metricspeed.cpython-311-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_metricspeed.c.o -MF dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_metricspeed.c.o.d -o dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_metricspeed.c.o -c dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so.p/metricspeed.c [106/120] cc -o dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so.p/meson-generated_metricspeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [107/120] cc -Idipy/segment/mrf.cpython-311-i386-linux-gnu.so.p -Idipy/segment -I../dipy/segment -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/segment/mrf.cpython-311-i386-linux-gnu.so.p/meson-generated_mrf.c.o -MF dipy/segment/mrf.cpython-311-i386-linux-gnu.so.p/meson-generated_mrf.c.o.d -o dipy/segment/mrf.cpython-311-i386-linux-gnu.so.p/meson-generated_mrf.c.o -c dipy/segment/mrf.cpython-311-i386-linux-gnu.so.p/mrf.c [108/120] cc -o dipy/segment/mrf.cpython-311-i386-linux-gnu.so dipy/segment/mrf.cpython-311-i386-linux-gnu.so.p/meson-generated_mrf.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [109/120] cc -Idipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -MF dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so.p/meson-generated_fbcmeasures.c.o.d -o dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -c dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so.p/fbcmeasures.c [110/120] cc -o dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so.p/meson-generated_fbcmeasures.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [111/120] cc -Idipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -MF dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so.p/meson-generated_streamlinespeed.c.o.d -o dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -c dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so.p/streamlinespeed.c [112/120] cc -o dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so.p/meson-generated_streamlinespeed.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [113/120] cc -Idipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -MF dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/meson-generated_stopping_criterion.c.o.d -o dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -c dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/stopping_criterion.c In file included from /usr/include/string.h:548, from /usr/include/python3.11/Python.h:26, from dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/stopping_criterion.c:16: In function 'memcpy', inlined from '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state' at dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/stopping_criterion.c:29853:3: /usr/include/i386-linux-gnu/bits/string_fortified.h:29:10: warning: '*(long long unsigned int *)(&__pyx_t_1[0])' may be used uninitialized [-Wmaybe-uninitialized] 29 | return __builtin___memcpy_chk (__dest, __src, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 30 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/stopping_criterion.c: In function '__pyx_f_4dipy_8tracking_18stopping_criterion___pyx_unpickle_StoppingCriterion__set_state': dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/stopping_criterion.c:29827:10: note: '*(long long unsigned int *)(&__pyx_t_1[0])' was declared here 29827 | double __pyx_t_1[1]; | ^~~~~~~~~ [114/120] cc -o dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so.p/meson-generated_stopping_criterion.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [115/120] cc -Idipy/tracking/distances.cpython-311-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/distances.cpython-311-i386-linux-gnu.so.p/meson-generated_distances.c.o -MF dipy/tracking/distances.cpython-311-i386-linux-gnu.so.p/meson-generated_distances.c.o.d -o dipy/tracking/distances.cpython-311-i386-linux-gnu.so.p/meson-generated_distances.c.o -c dipy/tracking/distances.cpython-311-i386-linux-gnu.so.p/distances.c [116/120] cc -o dipy/tracking/distances.cpython-311-i386-linux-gnu.so dipy/tracking/distances.cpython-311-i386-linux-gnu.so.p/meson-generated_distances.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [117/120] cc -Idipy/tracking/vox2track.cpython-311-i386-linux-gnu.so.p -Idipy/tracking -I../dipy/tracking -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so.p/meson-generated_vox2track.c.o -MF dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so.p/meson-generated_vox2track.c.o.d -o dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so.p/meson-generated_vox2track.c.o -c dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so.p/vox2track.c [118/120] cc -o dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so.p/meson-generated_vox2track.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [119/120] cc -Idipy/align/vector_fields.cpython-311-i386-linux-gnu.so.p -Idipy/align -I../dipy/align -I/usr/lib/python3/dist-packages/numpy/core/include -Idipy -I../dipy -I/usr/include/python3.11 -fvisibility=hidden -fdiagnostics-color=always -DNDEBUG -D_FILE_OFFSET_BITS=64 -Wall -Winvalid-pch -std=c99 -O2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -fopenmp -Wno-cpp -MD -MQ dipy/align/vector_fields.cpython-311-i386-linux-gnu.so.p/meson-generated_vector_fields.c.o -MF dipy/align/vector_fields.cpython-311-i386-linux-gnu.so.p/meson-generated_vector_fields.c.o.d -o dipy/align/vector_fields.cpython-311-i386-linux-gnu.so.p/meson-generated_vector_fields.c.o -c dipy/align/vector_fields.cpython-311-i386-linux-gnu.so.p/vector_fields.c [120/120] cc -o dipy/align/vector_fields.cpython-311-i386-linux-gnu.so dipy/align/vector_fields.cpython-311-i386-linux-gnu.so.p/meson-generated_vector_fields.c.o -Wl,--as-needed -Wl,--allow-shlib-undefined -Wl,-O1 -shared -fPIC -Wl,--start-group -lm -Wl,--end-group -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dipy-1.8.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp [1/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/version.py [2/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/align/bundlemin.cpython-311-i386-linux-gnu.so [3/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/align/crosscorr.cpython-311-i386-linux-gnu.so [4/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/align/expectmax.cpython-311-i386-linux-gnu.so [5/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/align/parzenhist.cpython-311-i386-linux-gnu.so [6/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so [7/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/align/transforms.cpython-311-i386-linux-gnu.so [8/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/align/vector_fields.cpython-311-i386-linux-gnu.so [9/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/core/interpolation.cpython-311-i386-linux-gnu.so [10/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so [11/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so [12/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so [13/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so [14/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so [15/517] /build/reproducible-path/dipy-1.8.0/.mesonpy-ttgj1s2p/dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so [16/517] 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/build/reproducible-path/dipy-1.8.0/dipy/../doc/examples/tracking_stopping_criterion.py [513/517] /build/reproducible-path/dipy-1.8.0/dipy/../doc/examples/viz_advanced.py [514/517] /build/reproducible-path/dipy-1.8.0/dipy/../doc/examples/viz_bundles.py [515/517] /build/reproducible-path/dipy-1.8.0/dipy/../doc/examples/viz_roi_contour.py [516/517] /build/reproducible-path/dipy-1.8.0/dipy/../doc/examples/viz_slice.py [517/517] /build/reproducible-path/dipy-1.8.0/dipy/../doc/examples/workflow_creation.py Successfully built dipy-1.8.0-cp311-cp311-linux_i686.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.11 with "installer" module find -name func_coef.nii.gz -print -exec chmod 0644 '{}' ';' ./dipy/data/files/func_coef.nii.gz ./.pybuild/cpython3_3.11_dipy/build/dipy/data/files/func_coef.nii.gz ./.pybuild/cpython3_3.12_dipy/build/dipy/data/files/func_coef.nii.gz make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' # Do not test just after build, lets install and then test make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild plugin_pyproject:178: Copying package built for python3.11 to destdir debian/rules execute_after_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' py3versions: no X-Python3-Version in control file, using supported versions # Prune duplicate LICENSE file find debian/ -name LICENSE -delete # Only now lets build docs cd doc/ \ && PYTHONPATH=/build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build \ /usr/bin/make html SPHINXOPTS="-D today=\"January 15, 2024\"" make[2]: Entering directory '/build/reproducible-path/dipy-1.8.0/doc' tools/build_modref_templates.py dipy reference /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow and Tensorflow -addons. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos Generating docs for dipy: -> dipy Generating docs for dipy.align: -> dipy.align -> dipy.align._public /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py 718 -> dipy.align.cpd -> dipy.align.imaffine -> dipy.align.imwarp -> dipy.align.metrics -> dipy.align.reslice -> dipy.align.scalespace -> dipy.align.streamlinear -> dipy.align.streamwarp Generating docs for dipy.boots: -> dipy.boots WARNING: Empty - dipy.boots Generating docs for dipy.core: -> dipy.core WARNING: Empty - dipy.core -> dipy.core.geometry -> dipy.core.gradients -> dipy.core.graph -> dipy.core.histeq -> dipy.core.ndindex -> dipy.core.onetime -> dipy.core.optimize -> dipy.core.profile -> dipy.core.rng -> dipy.core.sphere -> dipy.core.sphere_stats -> dipy.core.subdivide_octahedron -> dipy.core.wavelet Generating docs for dipy.data: -> dipy.data -> dipy.data.fetcher Generating docs for dipy.denoise: -> dipy.denoise WARNING: Empty - dipy.denoise -> dipy.denoise.adaptive_soft_matching -> dipy.denoise.gibbs -> dipy.denoise.localpca -> dipy.denoise.nlmeans -> dipy.denoise.noise_estimate -> dipy.denoise.non_local_means -> dipy.denoise.patch2self Generating docs for dipy.direction: -> dipy.direction WARNING: Empty - dipy.direction -> dipy.direction.peaks Generating docs for dipy.io: -> dipy.io WARNING: Empty - dipy.io -> dipy.io.bvectxt -> dipy.io.dpy -> dipy.io.gradients -> dipy.io.image -> dipy.io.peaks -> dipy.io.pickles -> dipy.io.stateful_tractogram -> dipy.io.streamline -> dipy.io.utils -> dipy.io.vtk Generating docs for dipy.nn: -> dipy.nn WARNING: Empty - dipy.nn -> dipy.nn.cnn_1d_denoising -> dipy.nn.evac -> dipy.nn.histo_resdnn -> dipy.nn.model -> dipy.nn.synb0 -> dipy.nn.utils Generating docs for dipy.reconst: -> dipy.reconst WARNING: Empty - dipy.reconst -> dipy.reconst.base -> dipy.reconst.cache -> dipy.reconst.cross_validation -> dipy.reconst.csdeconv -> dipy.reconst.cti -> dipy.reconst.dki -> dipy.reconst.dki_micro -> dipy.reconst.dsi -> dipy.reconst.dti -> dipy.reconst.forecast -> dipy.reconst.fwdti -> dipy.reconst.gqi -> dipy.reconst.ivim -> dipy.reconst.mapmri -> dipy.reconst.mcsd -> dipy.reconst.msdki -> dipy.reconst.multi_voxel -> dipy.reconst.odf -> dipy.reconst.qtdmri -> dipy.reconst.qti -> dipy.reconst.rumba -> dipy.reconst.sfm -> dipy.reconst.shm -> dipy.reconst.shore -> dipy.reconst.utils Generating docs for dipy.segment: -> dipy.segment WARNING: Empty - dipy.segment -> dipy.segment.bundles -> dipy.segment.clustering -> dipy.segment.fss -> dipy.segment.mask -> dipy.segment.metric -> dipy.segment.threshold -> dipy.segment.tissue Generating docs for dipy.sims: -> dipy.sims WARNING: Empty - dipy.sims -> dipy.sims.phantom -> dipy.sims.voxel Generating docs for dipy.stats: -> dipy.stats WARNING: Empty - dipy.stats -> dipy.stats.analysis Generating docs for dipy.tracking: -> dipy.tracking WARNING: Empty - dipy.tracking -> dipy.tracking._utils WARNING: Empty - dipy.tracking._utils -> dipy.tracking.learning -> dipy.tracking.life -> dipy.tracking.local_tracking -> dipy.tracking.mesh -> dipy.tracking.metrics -> dipy.tracking.streamline -> dipy.tracking.utils Generating docs for dipy.version: -> dipy.version WARNING: Empty - dipy.version Generating docs for dipy.viz: -> dipy.viz WARNING: Empty - dipy.viz -> dipy.viz.gmem -> dipy.viz.horizon WARNING: Empty - dipy.viz.horizon -> dipy.viz.horizon.app -> dipy.viz.horizon.tab WARNING: Empty - dipy.viz.horizon.tab -> dipy.viz.horizon.tab.base -> dipy.viz.horizon.tab.cluster -> dipy.viz.horizon.tab.peak -> dipy.viz.horizon.tab.roi -> dipy.viz.horizon.tab.slice -> dipy.viz.horizon.util -> dipy.viz.horizon.visualizer WARNING: Empty - dipy.viz.horizon.visualizer -> dipy.viz.horizon.visualizer.cluster -> dipy.viz.horizon.visualizer.slice -> dipy.viz.panel -> dipy.viz.plotting -> dipy.viz.projections -> dipy.viz.regtools -> dipy.viz.streamline Generating docs for dipy.workflows: -> dipy.workflows WARNING: Empty - dipy.workflows -> dipy.workflows.align -> dipy.workflows.base -> dipy.workflows.cli -> dipy.workflows.combined_workflow -> dipy.workflows.denoise -> dipy.workflows.docstring_parser -> dipy.workflows.flow_runner -> dipy.workflows.io -> dipy.workflows.mask -> dipy.workflows.multi_io -> dipy.workflows.nn -> dipy.workflows.reconst -> dipy.workflows.segment -> dipy.workflows.stats -> dipy.workflows.tracking -> dipy.workflows.viz -> dipy.workflows.workflow 17 files written tools/docgen_cmd.py dipy reference_cmd /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos Generating docs for: dipy_align_affine (ImageRegistrationFlow) Done Generating docs for: dipy_align_syn (SynRegistrationFlow) Done Generating docs for: dipy_apply_transform (ApplyTransformFlow) Done Generating docs for: dipy_buan_lmm (LinearMixedModelsFlow) Done Generating docs for: dipy_buan_shapes (BundleShapeAnalysis) Done Generating docs for: dipy_buan_profiles (BundleAnalysisTractometryFlow) Done Generating docs for: dipy_bundlewarp (BundleWarpFlow) Done Generating docs for: dipy_correct_motion (MotionCorrectionFlow) Done Generating docs for: dipy_denoise_nlmeans (NLMeansFlow) Done Generating docs for: dipy_denoise_lpca (LPCAFlow) Done Generating docs for: dipy_denoise_mppca (MPPCAFlow) Done Generating docs for: dipy_denoise_patch2self (Patch2SelfFlow) Done Generating docs for: dipy_evac_plus (EVACPlusFlow) Done Generating docs for: dipy_fetch (FetchFlow) Done Generating docs for: dipy_fit_csa (ReconstCSAFlow) Done Generating docs for: dipy_fit_csd (ReconstCSDFlow) Done Generating docs for: dipy_fit_dki (ReconstDkiFlow) Done Generating docs for: dipy_fit_dti (ReconstDtiFlow) Done Generating docs for: dipy_fit_ivim (ReconstIvimFlow) Done Generating docs for: dipy_fit_mapmri (ReconstMAPMRIFlow) Done Generating docs for: dipy_mask (MaskFlow) Done Generating docs for: dipy_gibbs_ringing (GibbsRingingFlow) Done Generating docs for: dipy_horizon (HorizonFlow) Done Generating docs for: dipy_info (IoInfoFlow) Done Generating docs for: dipy_labelsbundles (LabelsBundlesFlow) Done Generating docs for: dipy_median_otsu (MedianOtsuFlow) Done Generating docs for: dipy_recobundles (RecoBundlesFlow) Done Generating docs for: dipy_reslice (ResliceFlow) Done Generating docs for: dipy_snr_in_cc (SNRinCCFlow) Done Generating docs for: dipy_split (SplitFlow) Done Generating docs for: dipy_track (LocalFiberTrackingPAMFlow) Done Generating docs for: dipy_track_pft (PFTrackingPAMFlow) Done Generating docs for: dipy_slr (SlrWithQbxFlow) Done Generating index.rst Done Build API docs...done. # Standard html build after examples have been prepared sphinx-build -b html -d _build/doctrees -D today="January 15, 2024" . _build/html Running Sphinx v7.2.6 Initializing Examples folder revamp plugin... Initializing GitHub plugin making output directory... done [autosummary] generating autosummary for: api_changes.rst, cite.rst, devel/benchmarking.rst, devel/coding_style_guideline.rst, devel/commit_codes.rst, devel/gitwash/configure_git.rst, devel/gitwash/development_workflow.rst, devel/gitwash/dot2_dot3.rst, devel/gitwash/following_latest.rst, devel/gitwash/forking_hell.rst, ..., theory/sh_basis.rst, theory/spherical.rst, user_guide/data.rst, user_guide/dataset_list.rst, user_guide/dependencies.rst, user_guide/getting_started.rst, user_guide/index.rst, user_guide/installation.rst, user_guide/introduction.rst, user_guide/mission.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/__init__.py:22: UserWarning: You do not have FURY installed. Therefore, 3D visualization functions will not work for you. Please install or upgrade FURY using pip install -U furyFor detailed installation instructions visit: https://fury.gl/ warnings.warn( WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos WARNING:root:This model requires Tensorflow and Tensorflow -addons. Please install these packages using pip. If using mac, please refer to this link for installation. https://github.com/apple/tensorflow_macos building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 133 source files that are out of date updating environment: [new config] 133 added, 0 changed, 0 removed reading sources... [ 1%] api_changes reading sources... 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[ 89%] stateoftheart reading sources... [ 89%] subscribe reading sources... [ 90%] theory/b_and_q reading sources... [ 91%] theory/bmatrix reading sources... [ 92%] theory/gqi reading sources... [ 92%] theory/index reading sources... [ 93%] theory/sh_basis reading sources... [ 94%] theory/spherical reading sources... [ 95%] user_guide/data reading sources... [ 95%] user_guide/dataset_list reading sources... [ 96%] user_guide/dependencies reading sources... [ 97%] user_guide/getting_started reading sources... [ 98%] user_guide/index reading sources... [ 98%] user_guide/installation reading sources... [ 99%] user_guide/introduction reading sources... [100%] user_guide/mission /build/reproducible-path/dipy-1.8.0/doc/api_changes.rst:16: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/doc/api_changes.rst:19: WARNING: Block quote ends without a blank line; unexpected unindent. ../benchmarks/README.rst:18: WARNING: Title underline too short. Getting Started 🏃‍♂️ ------------------ ../benchmarks/README.rst:18: WARNING: Title underline too short. Getting Started 🏃‍♂️ ------------------ /build/reproducible-path/dipy-1.8.0/doc/devel/benchmarking.rst:: ERROR: Anonymous hyperlink mismatch: 1 references but 0 targets. See "backrefs" attribute for IDs. links_names.inc:81: WARNING: Duplicate explicit target name: "cython". /build/reproducible-path/dipy-1.8.0/doc/devel/index.rst:6: WARNING: toctree contains reference to nonexisting document 'devel/installing_from_source' /build/reproducible-path/dipy-1.8.0/doc/devel/make_release.rst:123: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/doc/gimbal_lock.rst:27: WARNING: image file not readable: images/spitfire_0.png /build/reproducible-path/dipy-1.8.0/doc/gimbal_lock.rst:32: WARNING: image file not readable: images/spitfire_x.png /build/reproducible-path/dipy-1.8.0/doc/gimbal_lock.rst:37: WARNING: image file not readable: images/spitfire_y.png /build/reproducible-path/dipy-1.8.0/doc/gimbal_lock.rst:42: WARNING: image file not readable: images/spitfire_hoped.png /build/reproducible-path/dipy-1.8.0/doc/index.rst:156: WARNING: toctree contains reference to nonexisting document 'examples_built/index' /build/reproducible-path/dipy-1.8.0/doc/interfaces/buan_flow.rst:290: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/basic_flow.rst /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundle_segmentation_flow.rst:118: WARNING: duplicate citation Yeh18, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/buan_flow.rst /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundle_segmentation_flow.rst:128: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/buan_flow.rst /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundlewarp_registration_flow.rst:52: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundlewarp_registration_flow.rst:113: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundle_segmentation_flow.rst /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:62: ERROR: Error in "image" directive: no content permitted. image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_original.png?raw=true :align: middle /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:62: WARNING: Substitution definition "image1" empty or invalid. .. |image1| image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_original.png?raw=true :align: middle /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:65: ERROR: Error in "image" directive: no content permitted. image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_denoise_LPCA.png?raw=true :align: middle /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:65: WARNING: Substitution definition "image2" empty or invalid. .. |image2| image:: https://github.com/dipy/dipy_data/blob/master/stanford_hardi_denoise_LPCA.png?raw=true :align: middle /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:142: WARNING: Literal block expected; none found. /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:72: ERROR: Undefined substitution referenced: "image1". /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:72: ERROR: Undefined substitution referenced: "image2". /build/reproducible-path/dipy-1.8.0/doc/interfaces/registration_flow.rst:106: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/interfaces/registration_flow.rst:163: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundle_segmentation_flow.rst /build/reproducible-path/dipy-1.8.0/doc/interfaces/tracking_flow.rst:204: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/basic_flow.rst /build/reproducible-path/dipy-1.8.0/doc/recipes.rst:31: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/recipes.rst:41: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:: ERROR: Anonymous hyperlink mismatch: 1 references but 0 targets. See "backrefs" attribute for IDs. /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst:39::1: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst:73::1: WARNING: Inline strong start-string without end-string. WARNING: Failed to get a function signature for dipy.align.VerbosityLevels: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public.write_mapping:7: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.align._public._METHOD_DICT: {'center_of_mass': (functools.partial(, pipeline=['center_of_mass']), None), 'translation': (functools.partial(, pipeline=['translation']), ), 'rigid_isoscaling': (functools.partial(, pipeline=['rigid_isoscaling']), ), 'rigid_scaling': (functools.partial(, pipeline=['rigid_scaling']), ), 'rigid': (functools.partial(, pipeline=['rigid']), ), 'affine': (functools.partial(, pipeline=['affine']), )} is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:3: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/_public.py:docstring of dipy.align._public._METHOD_DICT:8: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineMap.transform:37: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineMap.transform_inverse:37: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine.AffineRegistration.optimize:38: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.align.imaffine._transform_method: {(2, 'nearest'): , (3, 'nearest'): , (2, 'linear'): , (3, 'linear'): } is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:3: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imaffine.py:docstring of dipy.align.imaffine._transform_method:8: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/imwarp.py:docstring of dipy.align.imwarp.SymmetricDiffeomorphicRegistration.update:29: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.align.imwarp.RegistrationStages: is not a callable object WARNING: Failed to get a function signature for dipy.align.imwarp.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/metrics.py:docstring of dipy.align.metrics.v_cycle_3d:9: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.align.scalespace.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:50: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:51: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:79: WARNING: Duplicate explicit target name: "garyfallidis14". WARNING: Failed to get a function signature for dipy.align.streamlinear.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:18: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:37: WARNING: Duplicate explicit target name: "garyfallidis15". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:62: WARNING: Duplicate explicit target name: "garyfallidis15". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:63: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:66: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:68: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:43: WARNING: Duplicate explicit target name: "garyfallidis15". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:44: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:47: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:49: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamwarp.py:docstring of dipy.align.streamwarp.bundlewarp_vector_filed:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineDistanceMetric.__init__:9: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:66: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.bundle_min_distance_fast:32: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:28: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:47: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.BundleMinDistanceMetric:12: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundlewarp_registration_flow.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:75: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/registration_flow.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:79: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.StreamlineLinearRegistration.__init__:82: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundle_segmentation_flow.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.progressive_slr:37: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:62: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.slr_with_qbx:67: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:43: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamlinear.py:docstring of dipy.align.streamlinear.groupwise_slr:48: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/align/streamwarp.py:docstring of dipy.align.streamwarp.bundlewarp:49: WARNING: duplicate citation Chandio2023, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundlewarp_registration_flow.rst /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.core.rst:42::1: WARNING: Inline strong start-string without end-string. WARNING: Failed to get a function signature for dipy.core.geometry._TUPLE2AXES: {(0, 0, 0, 0): 'sxyz', (0, 0, 1, 0): 'sxyx', (0, 1, 0, 0): 'sxzy', (0, 1, 1, 0): 'sxzx', (1, 0, 0, 0): 'syzx', (1, 0, 1, 0): 'syzy', (1, 1, 0, 0): 'syxz', (1, 1, 1, 0): 'syxy', (2, 0, 0, 0): 'szxy', (2, 0, 1, 0): 'szxz', (2, 1, 0, 0): 'szyx', (2, 1, 1, 0): 'szyz', (0, 0, 0, 1): 'rzyx', (0, 0, 1, 1): 'rxyx', (0, 1, 0, 1): 'ryzx', (0, 1, 1, 1): 'rxzx', (1, 0, 0, 1): 'rxzy', (1, 0, 1, 1): 'ryzy', (1, 1, 0, 1): 'rzxy', (1, 1, 1, 1): 'ryxy', (2, 0, 0, 1): 'ryxz', (2, 0, 1, 1): 'rzxz', (2, 1, 0, 1): 'rxyz', (2, 1, 1, 1): 'rzyz'} is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:3: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:4: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry._TUPLE2AXES:8: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry.perpendicular_directions:32: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/geometry.py:docstring of dipy.core.geometry.perpendicular_directions:34: WARNING: Bullet list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.core.gradients.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.gradient_table_from_bvals_bvecs:41: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.reorient_bvecs:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.params_to_btens:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/gradients.py:docstring of dipy.core.gradients.params_to_btens:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:61: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:69: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.Optimizer.__init__:88: WARNING: Block quote ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.core.sphere.octahedron_vertices: array([[ 1., 0., 0.], [-1., 0., 0.], [ 0., 1., 0.], [ 0., -1., 0.], [ 0., 0., 1.], [ 0., 0., -1.]]) is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.octahedron_faces: array([[0, 4, 2], [1, 5, 3], [4, 2, 1], [5, 3, 0], [1, 4, 3], [0, 5, 2], [0, 4, 3], [1, 5, 2]], dtype=uint16) is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.icosahedron_vertices: array([[ 0.85065081, 0.52573111, 0. ], [-0.85065081, 0.52573111, 0. ], [ 0.85065081, -0.52573111, 0. ], [-0.85065081, -0.52573111, 0. ], [ 0.52573111, 0. , 0.85065081], [ 0.52573111, 0. , -0.85065081], [-0.52573111, 0. , 0.85065081], [-0.52573111, 0. , -0.85065081], [ 0. , 0.85065081, 0.52573111], [ 0. , -0.85065081, 0.52573111], [ 0. , 0.85065081, -0.52573111], [ 0. , -0.85065081, -0.52573111]]) is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.icosahedron_faces: array([[ 8, 4, 0], [ 2, 5, 0], [ 2, 5, 11], [ 9, 2, 11], [ 2, 4, 0], [ 9, 2, 4], [10, 8, 1], [10, 8, 0], [10, 5, 0], [ 6, 3, 1], [ 9, 6, 3], [ 6, 8, 1], [ 6, 8, 4], [ 9, 6, 4], [ 7, 10, 1], [ 7, 10, 5], [ 7, 3, 1], [ 7, 3, 11], [ 9, 3, 11], [ 7, 5, 11]], dtype=uint16) is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.core.sphere.unit_octahedron: is not a callable object WARNING: Failed to get a function signature for dipy.core.sphere.unit_icosahedron: is not a callable object WARNING: Failed to get a function signature for dipy.core.sphere.hemi_icosahedron: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/optimize.py:docstring of dipy.core.optimize.PositiveDefiniteLeastSquares.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.data.rst:107::1: WARNING: Inline interpreted text or phrase reference start-string without end-string. WARNING: Failed to get a function signature for dipy.data.DATA_DIR: '/build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/files' is not a callable object WARNING: Failed to get a function signature for dipy.data.default_sphere: is not a callable object WARNING: Failed to get a function signature for dipy.data.small_sphere: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_data:15: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher._make_fetcher..fetcher:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_qtdMRI_test_retest_2subjects:1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_mni_template:34: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.read_mni_template:39: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hcp:42: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hbn:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hbn:24: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.data.rst:28::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.data.rst:107::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/__init__.py:docstring of dipy.data.load_sdp_constraints:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/data/fetcher.py:docstring of dipy.data.fetcher.fetch_hcp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/gibbs.py:docstring of dipy.denoise.gibbs.gibbs_removal:38: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/gibbs.py:docstring of dipy.denoise.gibbs.gibbs_removal:40: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:5: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:12: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.dimensionality_problem_message:14: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.genpca:56: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:63: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:67: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:40: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:44: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:7: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:9: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:56: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:57: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:61: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.piesno:62: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:38: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:39: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:42: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:32: WARNING: Duplicate explicit target name: "coupe11". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/nlmeans.py:docstring of dipy.denoise.nlmeans.nlmeans:18: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/adaptive_soft_matching.py:docstring of dipy.denoise.adaptive_soft_matching.adaptive_soft_matching:30: WARNING: duplicate citation Coupe11, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:27: WARNING: duplicate citation Coupe08, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/non_local_means.py:docstring of dipy.denoise.non_local_means.non_local_means:32: WARNING: duplicate citation Coupe11, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.denoise.rst /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.denoise.rst:50::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.denoise.rst:50::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.genpca:10: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:39: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:39: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:44: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.localpca:47: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/localpca.py:docstring of dipy.denoise.localpca.mppca:22: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:26: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/denoise/noise_estimate.py:docstring of dipy.denoise.noise_estimate.estimate_sigma:26: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/dpy.py:docstring of dipy.io.dpy.Dpy.__init__:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/dpy.py:docstring of dipy.io.dpy.Dpy.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/stateful_tractogram.py:docstring of dipy.io.stateful_tractogram.StatefulTractogram.from_sft:18: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.io.stateful_tractogram.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/streamline.py:docstring of dipy.io.streamline.load_generator:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/streamline.py:docstring of dipy.io.streamline.save_generator:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.nifti1_symmat:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.is_reference_info_valid:6: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.is_reference_info_valid:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/io/utils.py:docstring of dipy.io.utils.get_reference_info:8: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.nn.evac.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/histo_resdnn.py:docstring of dipy.nn.histo_resdnn.HistoResDNN.__init__:28: WARNING: Duplicate explicit target name: "1". WARNING: Failed to get a function signature for dipy.nn.histo_resdnn.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.EncoderBlock:1: WARNING: duplicate object description of dipy.nn.synb0.EncoderBlock, other instance in reference/dipy.nn, use :no-index: for one of them /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.EncoderBlock.__init__:1: WARNING: duplicate object description of dipy.nn.synb0.EncoderBlock.__init__, other instance in reference/dipy.nn, use :no-index: for one of them /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.EncoderBlock.call:1: WARNING: duplicate object description of dipy.nn.synb0.EncoderBlock.call, other instance in reference/dipy.nn, use :no-index: for one of them /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.DecoderBlock:1: WARNING: duplicate object description of dipy.nn.synb0.DecoderBlock, other instance in reference/dipy.nn, use :no-index: for one of them /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.DecoderBlock.__init__:1: WARNING: duplicate object description of dipy.nn.synb0.DecoderBlock.__init__, other instance in reference/dipy.nn, use :no-index: for one of them /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.DecoderBlock.call:1: WARNING: duplicate object description of dipy.nn.synb0.DecoderBlock.call, other instance in reference/dipy.nn, use :no-index: for one of them /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.__init__:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.__init__:22: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.Synb0.predict:29: WARNING: Definition list ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.nn.synb0.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.normalize:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.normalize:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.unnormalize:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.unnormalize:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/synb0.py:docstring of dipy.nn.synb0.UNet3D:1: WARNING: duplicate object description of dipy.nn.synb0.UNet3D, other instance in reference/dipy.nn, use :no-index: for one of them /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.normalize:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.normalize:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.unnormalize:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/nn/utils.py:docstring of dipy.nn.utils.unnormalize:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:136::1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: WARNING: Inline substitution_reference start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:5: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:14: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:19: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.coeff_of_determination:27: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cross_validation.py:docstring of dipy.reconst.cross_validation.kfold_xval:39: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:19: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:24: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:44: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:48: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:51: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:53: WARNING: Duplicate explicit target name: "4". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:20: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:22: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:30: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:35: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response:12: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:45: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask:46: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.estimate_response:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:34: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:35: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:40: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.response_from_mask_ssst:41: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response_ssst:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.auto_response_ssst:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:8: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.recursive_response:53: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.__init__:9: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.__init__:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.predict:10: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorModel.predict:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorFit.__init__:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.CorrelationTensorFit.predict:11: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.multi_gaussian_k_from_c:8: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.split_cti_params:15: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:9: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.cti_prediction:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/cti.py:docstring of dipy.reconst.cti.ls_fit_cti:26: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:14: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:16: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:16: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:17: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.__init__:26: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.predict:9: WARNING: Literal block expected; none found. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisModel.predict:10: WARNING: Enumerated list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.__init__:10: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.__init__:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:48: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:51: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:54: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:39: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:43: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:67: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:70: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:73: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.carlson_rf:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:34: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:41: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:45: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:71: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:74: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:77: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:55: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:58: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:61: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_maximum:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_maximum:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:21: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:45: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:49: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:4: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:19: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.dki_prediction:26: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.ls_fit_dki:26: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:33: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:40: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.split_dki_param:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:14: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:17: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:17: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:29: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:27: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.awf:11: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.axonal_diffusivity:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_ad:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_evals:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_rd:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.restricted_evals:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:12: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:32: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:9: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:40: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.dkimicro_prediction:1: WARNING: Inline interpreted text or phrase reference start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:19: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:20: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:22: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:25: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:26: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.create_qspace:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.create_qtable:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.hanning_filter:12: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.LR_deconv:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:21: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:21: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:48: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:51: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:54: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:5: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:9: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:15: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.adc:21: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.linearity:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.planarity:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.sphericity:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.linearity:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.planarity:26: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.sphericity:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.wls_fit_tensor:55: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.ols_fit_tensor:42: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:39: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:40: WARNING: Explicit markup ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_indices: array([[0, 1, 3], [1, 2, 4], [3, 4, 5]]) is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_rows: array([0, 1, 1, 2, 2, 2]) is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:87: ERROR: Unexpected indentation. WARNING: Failed to get a function signature for dipy.reconst.dti._lt_cols: array([0, 0, 1, 0, 1, 2]) is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:87: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.quantize_evecs:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:13: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:17: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:21: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:15: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:15: WARNING: Inline strong start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:16: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:22: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorFit.__init__:12: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorFit.__init__:19: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.lower_triangular_to_cholesky:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.cholesky_to_lower_triangular:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:21: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:23: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:16: WARNING: Literal block expected; none found. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:78: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelTRR.__init__:81: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:17: WARNING: Literal block expected; none found. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:31: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:34: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.__init__:37: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:30: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:34: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:20: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:24: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:28: WARNING: Duplicate explicit target name: "4". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:94: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:98: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:103: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:107: WARNING: Duplicate explicit target name: "4". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:111: WARNING: Duplicate explicit target name: "5". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:115: WARNING: Duplicate explicit target name: "6". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:11: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:12: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:12: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:12: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:13: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:10: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:11: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:13: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:9: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:10: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:13: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:9: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:13: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:14: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:7: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:11: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:7: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:11: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:7: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:8: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:11: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:12: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.isotropic_scale_factor:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.isotropic_scale_factor:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:18: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:27: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:28: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:24: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:27: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:28: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:19: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:19: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:16: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:17: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:22: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:23: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation:23: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:19: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:30: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:44: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:47: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:51: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.multi_tissue_basis:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.multi_shell_fiber_response:20: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.mask_for_response_msmt:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.mask_for_response_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.response_from_mask_msmt:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.response_from_mask_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.auto_response_msmt:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.auto_response_msmt:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.msd:11: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.msk:11: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:20: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:16: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:20: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:21: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.msk_from_awf:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:28: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.wls_fit_msdki:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:19: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.norm_of_laplacian_signal:14: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:20: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:17: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:23: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:22: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qtdmri_to_mapmri_coef:15: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:20: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:20: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:20: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_to_mapmri_matrix:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_isotropic_to_mapmri_matrix:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_laplacian_reg_matrix:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_isotropic_laplacian_reg_matrix:8: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_iso_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_iso_reg_matrix_q:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part1_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part23_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.part4_reg_matrix_tau:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.generalized_crossvalidation:5: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.GCV_cost_function:5: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.qtdmri_number_of_coefficients:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:15: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:21: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:24: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:17: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:18: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:20: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_m:22: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_md:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_mu:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:16: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_bulk:18: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:19: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_mu:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:16: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:17: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.k_shear:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:4: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:8: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.md:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:5: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:9: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.mean_d_sq:18: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:4: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:10: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:15: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:22: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:24: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:28: CRITICAL: Unexpected section title. References ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:29: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:4: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:16: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:21: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:27: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.qti_signal:29: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:4: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:9: CRITICAL: Unexpected section title. Returns ------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:14: CRITICAL: Unexpected section title. Notes ----- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:20: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:22: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:25: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.design_matrix:26: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:23: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:27: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:68: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:77: WARNING: Duplicate explicit target name: "2". WARNING: Failed to get a function signature for dipy.reconst.rumba.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.generate_kernel:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.generate_kernel:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:7: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.IsotropicFit.__init__:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.__init__:48: WARNING: Duplicate explicit target name: "rokem2014". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:25: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:27: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.fit:36: WARNING: Bullet list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:56: WARNING: Duplicate explicit target name: "rokem2015". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:61: WARNING: Duplicate explicit target name: "rokem2014". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.CsaOdfModel:5: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.OpdtModel:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.OpdtModel:9: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.QballModel:5: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_rh:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:12: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:14: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.bootstrap_data_array:17: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:35: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:38: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:42: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:36: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:40: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:39: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:42: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:46: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.anisotropic_power:1: WARNING: Inline substitution_reference start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:27: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:31: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:24: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:27: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:31: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:7: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:6: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:7: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:14: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:15: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/utils.py:docstring of dipy.reconst.utils.dki_design_matrix:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:40: WARNING: Footnote [7] is not referenced. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:43: WARNING: Footnote [8] is not referenced. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:47: WARNING: Footnote [9] is not referenced. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.gen_dirac:20: ERROR: Undefined substitution referenced: "m". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux_from_index:1: ERROR: Undefined substitution referenced: "m". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux:1: ERROR: Undefined substitution referenced: "m". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.SparseFascicleModel.__init__:48: WARNING: duplicate citation Rokem2014, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:56: WARNING: duplicate citation Rokem2015, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/sfm.py:docstring of dipy.reconst.sfm.sfm_design_matrix:61: WARNING: duplicate citation Rokem2014, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:70::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:120::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:136::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:203::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:240::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:326::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:364::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:481::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:543::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:563::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:563::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:563::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:563::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:19: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:30: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:30: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSphericalDeconvModel.__init__:33: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:3: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.ConstrainedSDTModel.__init__:27: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.forward_sdt_deconv_mat:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.csdeconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Unknown target name: "lambda". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.odf_sh_to_sharp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/csdeconv.py:docstring of dipy.reconst.csdeconv.mask_for_response_ssst:24: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.ak:30: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.kfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.mkt:22: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:6: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.DiffusionKurtosisFit.rk:38: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_diffusion_variance:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.directional_kurtosis:20: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.apparent_kurtosis_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:13: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:32: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:32: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.radial_kurtosis:43: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:13: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:34: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:34: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.axial_kurtosis:37: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.mean_kurtosis_tensor:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.kurtosis_fractional_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.ls_fit_dki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki.py:docstring of dipy.reconst.dki.cls_fit_dki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructureModel.predict:23: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.awf:6: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.axonal_diffusivity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_ad:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_evals:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.hindered_rd:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.restricted_evals:5: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.KurtosisMicrostructuralFit.tortuosity:7: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.axonal_water_fraction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.diffusion_components:34: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dki_micro.py:docstring of dipy.reconst.dki_micro.dkimicro_prediction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.msd_discrete:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.DiffusionSpectrumDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dsi.py:docstring of dipy.reconst.dsi.LR_deconv:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.linearity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.planarity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.TensorFit.sphericity:4: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.geodesic_anisotropy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.isotropic:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.deviatoric:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.deviatoric:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.mode:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.mode:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.linearity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.planarity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.sphericity:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.wls_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.ols_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti.restore_fit_tensor:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel:7: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/forecast.py:docstring of dipy.reconst.forecast.ForecastModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:9: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.FreeWaterTensorModel.__init__:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.fwdti_prediction:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.wls_fit_tensor:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.lower_triangular_to_cholesky:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.cholesky_to_lower_triangular:6: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/gqi.py:docstring of dipy.reconst.gqi.GeneralizedQSamplingModel.__init__:28: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:3: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/ivim.py:docstring of dipy.reconst.ivim.IvimModelVP.ivim_mix_cost_one:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel:3: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:4: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:8: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:8: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "4". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:17: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:21: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriModel.__init__:50: ERROR: Duplicate target name, cannot be used as a unique reference: "6". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_parallel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.ng_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.norm_of_laplacian_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.MapmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.b_mat_isotropic:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_1d:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_phi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_1d:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_psi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_phi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_signal_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_psi_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_radial_pdf_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_odf_sh_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_laplacian_reg_matrix_from_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_isotropic_index_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_u:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_t:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.map_laplace_s:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_STU_reg_matrices:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.mapmri_laplacian_reg_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation_array:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mapmri.py:docstring of dipy.reconst.mapmri.generalized_crossvalidation:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:6: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/mcsd.py:docstring of dipy.reconst.mcsd.MultiShellDeconvModel.__init__:11: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2di:12: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2f:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.MeanDiffusionKurtosisFit.smt2uFA:13: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.msk_from_awf:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.awf_from_msk:19: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/msdki.py:docstring of dipy.reconst.msdki.wls_fit_msdki:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/odf.py:docstring of dipy.reconst.odf.gfa:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriModel:1: ERROR: Unknown target name: "n". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.norm_of_laplacian_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.odf_sh:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qiv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.qtdmri_to_mapmri_coef:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtap:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtop:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qtdmri.py:docstring of dipy.reconst.qtdmri.QtdmriFit.rtpp:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:1964: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_signal_matrix". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:1979: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_isotropic_signal_matrix". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:1989: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_eap_matrix". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.reconst.rst:1994: ERROR: Duplicate target name, cannot be used as a unique reference: "qtdmri_isotropic_eap_matrix". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiModel.__init__:14: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: ERROR: Unknown target name: "c". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.QtiFit.c_c:14: ERROR: Unknown target name: "c". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/qti.py:docstring of dipy.reconst.qti.dtd_covariance:16: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.RumbaSDModel.__init__:13: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.mbessel_ratio:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/rumba.py:docstring of dipy.reconst.rumba.rumba_deconv_global:1: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux_from_index:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_tournier:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sh_descoteaux:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_mrtrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.real_sym_sh_basis:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sf_to_sh:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf:15: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.sh_to_sf_matrix:14: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_from_legacy:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shm.py:docstring of dipy.reconst.shm.convert_sh_to_legacy:11: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel:1: ERROR: Duplicate target name, cannot be used as a unique reference: "5". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreModel.__init__:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.msd:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.ShoreFit.rtop_signal:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_pdf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/shore.py:docstring of dipy.reconst.shore.shore_matrix_odf:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.evaluate_results:9: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:23: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:25: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:55: WARNING: Inline literal start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:56: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:57: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:79: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:25: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:27: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:57: WARNING: Inline literal start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:58: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:59: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:81: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:86: WARNING: Explicit markup ends without a blank line; unexpected unindent. WARNING: Failed to get a function signature for dipy.segment.bundles.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.ba_analysis:24: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.cluster_bundle:23: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:10: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:12: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:13: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:26: WARNING: Duplicate explicit target name: "chandio2020". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:27: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:32: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.Cluster.assign:5: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.ClusterMap.add_cluster:5: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.ClusterMap.remove_cluster:5: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.QuickBundlesX:17: WARNING: Duplicate explicit target name: "garyfallidis12". WARNING: Failed to get a function signature for dipy.segment.clustering.logger: is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:31: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:35: WARNING: Duplicate explicit target name: "garyfallidis16". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/fss.py:docstring of dipy.segment.fss.FastStreamlineSearch.radius_search:30: WARNING: Duplicate explicit target name: "stonge2022". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/mask.py:docstring of dipy.segment.mask.median_otsu:57: WARNING: Inline literal start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/metric.py:docstring of dipy.segment.metric.mdf:20: WARNING: Duplicate explicit target name: "garyfallidis12". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:18: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.__init__:38: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.recognize:79: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.RecoBundles.refine:81: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_adjacency:22: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/tracking_flow.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.ba_analysis:24: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.cluster_bundle:23: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:26: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/bundles.py:docstring of dipy.segment.bundles.bundle_shape_similarity:32: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.QuickBundlesX:17: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:31: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/clustering.py:docstring of dipy.segment.clustering.qbx_and_merge:35: WARNING: duplicate citation Garyfallidis16, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/fss.py:docstring of dipy.segment.fss.FastStreamlineSearch.radius_search:30: WARNING: duplicate citation StOnge2022, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/segment/metric.py:docstring of dipy.segment.metric.mdf:20: WARNING: duplicate citation Garyfallidis12, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst WARNING: Failed to get a function signature for dipy.sims.voxel.diffusion_evals: array([0.0015, 0.0004, 0.0004]) is not a callable object /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:84: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:85: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:87: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:33: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:35: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.sticks_and_ball:30: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.callaghan_perpendicular:19: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:37: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:40: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor:31: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor:34: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:8: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:9: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_dki:55: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.kurtosis_element:37: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.dki_signal:29: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_odf:22: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_rtop:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_rtop:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_pdf:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_pdf:25: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.single_tensor_msd:18: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.multi_tensor_msd:20: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.sims.rst:54::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.sims.rst:54::1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/phantom.py:docstring of dipy.sims.phantom.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/phantom.py:docstring of dipy.sims.phantom.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.add_noise:27: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.callaghan_perpendicular:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.cylinders_and_ball_soderman:1: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.kurtosis_element:33: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/stats/analysis.py:docstring of dipy.stats.analysis.assignment_map:22: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/stats/analysis.py:docstring of dipy.stats.analysis.assignment_map:21: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/tracking/utils.py:docstring of dipy.tracking.utils.transform_tracking_output:13: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/app.py:docstring of dipy.viz.horizon.app.horizon:69: WARNING: Duplicate explicit target name: "horizon_ismrm19". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/tab/base.py:docstring of dipy.viz.horizon.tab.base.HorizonTab.register_elements:5: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/panel.py:docstring of dipy.viz.panel.slicer_panel:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/panel.py:docstring of dipy.viz.panel.slicer_panel:14: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.overlay_images:30: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.plot_2d_diffeomorphic_map:48: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.plot_slices:19: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/regtools.py:docstring of dipy.viz.regtools.overlay_slices:32: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/viz/horizon/app.py:docstring of dipy.viz.horizon.app.horizon:69: WARNING: duplicate citation Horizon_ISMRM19, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.viz.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser:17: WARNING: Inline literal start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:11: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:12: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:30: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:32: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:33: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:54: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:61: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.ImageRegistrationFlow.run:29: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.ApplyTransformFlow.run:11: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.NLMeansFlow.run:29: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:53: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:63: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:30: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:31: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:35: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:36: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:26: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:27: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:30: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.GibbsRingingFlow.run:31: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser.Reader.__init__:2: CRITICAL: Unexpected section title. Parameters ---------- /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/docstring_parser.py:docstring of dipy.workflows.docstring_parser.Reader.__init__:5: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:7: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:9: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/io.py:docstring of dipy.workflows.io.SplitFlow.run:10: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/nn.py:docstring of dipy.workflows.nn.EVACPlusFlow.run:20: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:77: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:81: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:85: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstCSDFlow.run:66: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstCSAFlow.run:53: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:66: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:70: WARNING: Duplicate explicit target name: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:75: WARNING: Duplicate explicit target name: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstRUMBAFlow.run:106: WARNING: Duplicate explicit target name: "1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:54: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:59: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.LabelsBundlesFlow.run:16: WARNING: Duplicate explicit target name: "garyfallidis17". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:25: WARNING: Duplicate explicit target name: "chandio2020". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:26: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:11: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:13: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.LinearMixedModelsFlow.save_lmm_plot:14: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:24: WARNING: Duplicate explicit target name: "chandio2020". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:25: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:29: WARNING: Duplicate explicit target name: "chandio2020". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:30: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:10: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:11: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDtiFlow.run:88: WARNING: Footnote [4] is not referenced. /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:17: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:53: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:57: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.SlrWithQbxFlow.run:60: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/align.py:docstring of dipy.workflows.align.BundleWarpFlow.run:47: WARNING: duplicate citation Chandio2023, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.align.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.NLMeansFlow.run:28: WARNING: duplicate citation Descoteaux08, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.denoise.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstIvimFlow.run:44: WARNING: duplicate citation Stejskal65, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/reconstruction_flow.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstIvimFlow.run:50: WARNING: duplicate citation LeBihan84, other instance in /build/reproducible-path/dipy-1.8.0/doc/interfaces/reconstruction_flow.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:54: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.RecoBundlesFlow.run:58: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.stats.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/segment.py:docstring of dipy.workflows.segment.LabelsBundlesFlow.run:16: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleAnalysisTractometryFlow.run:25: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.BundleShapeAnalysis.run:24: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/stats.py:docstring of dipy.workflows.stats.buan_bundle_profiles:29: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/viz.py:docstring of dipy.workflows.viz.HorizonFlow.run:71: WARNING: duplicate citation Horizon_ISMRM19, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.viz.rst /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:15: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.LPCAFlow.run:41: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/denoise.py:docstring of dipy.workflows.denoise.MPPCAFlow.run:19: ERROR: Duplicate target name, cannot be used as a unique reference: "2". /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst:587: ERROR: Duplicate target name, cannot be used as a unique reference: "io_iterator". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstDkiFlow.run:27: ERROR: Duplicate target name, cannot be used as a unique reference: "3". /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/workflows/reconst.py:docstring of dipy.workflows.reconst.ReconstRUMBAFlow.run:1: ERROR: Duplicate target name, cannot be used as a unique reference: "1". /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_align_affine.rst:30: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_align_affine.rst:32: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_align_affine.rst:34: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_align_affine.rst:35: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_align_syn.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_align_syn.rst:34: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_apply_transform.rst:17: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_buan_profiles.rst:38: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_buan_profiles.rst:37: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_buan_shapes.rst:25: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_buan_shapes.rst:27: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_buan_shapes.rst:40: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_buan_shapes.rst:39: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_buan_profiles.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_bundlewarp.rst:57: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_bundlewarp.rst:56: WARNING: duplicate citation Chandio2023, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_lpca.rst:48: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_lpca.rst:45: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_mppca.rst:24: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_mppca.rst:26: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_mppca.rst:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_mppca.rst:41: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_nlmeans.rst:43: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_nlmeans.rst:42: WARNING: duplicate citation Descoteaux08, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_patch2self.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_patch2self.rst:34: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_patch2self.rst:50: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_patch2self.rst:49: WARNING: duplicate citation Fadnavis20, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_evac_plus.rst:38: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_evac_plus.rst:37: WARNING: duplicate citation Park2022, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csa.rst:58: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csa.rst:57: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csd.rst:35: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csd.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csd.rst:39: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csd.rst:43: ERROR: Unexpected indentation. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csd.rst:44: WARNING: Block quote ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csd.rst:66: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_csd.rst:65: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dki.rst:34: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dki.rst:64: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dki.rst:61: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dki.rst:62: WARNING: Footnote [2] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dti.rst:35: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dti.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dti.rst:64: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dti.rst:59: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dti.rst:60: WARNING: Footnote [2] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dti.rst:61: WARNING: Footnote [3] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_dti.rst:62: WARNING: Footnote [4] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_ivim.rst:32: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_ivim.rst:53: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_ivim.rst:51: WARNING: duplicate citation Stejskal65, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_ivim.rst:52: WARNING: duplicate citation LeBihan84, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_mapmri.rst:39: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_fit_mapmri.rst:41: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_gibbs_ringing.rst:40: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_gibbs_ringing.rst:38: WARNING: Footnote [1] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_gibbs_ringing.rst:39: WARNING: Footnote [2] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:35: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:37: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:45: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:47: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:51: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:53: WARNING: Definition list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:54: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:70: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:69: WARNING: duplicate citation Horizon_ISMRM19, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_labelsbundles.rst:36: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_labelsbundles.rst:35: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_median_otsu.rst:31: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_recobundles.rst:70: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_recobundles.rst:68: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_labelsbundles.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_recobundles.rst:69: WARNING: duplicate citation Chandio2020, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_buan_shapes.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_slr.rst:33: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_slr.rst:61: WARNING: Explicit markup ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_slr.rst:33: ERROR: Undefined substitution referenced: "num_threads + 1". /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_slr.rst:58: WARNING: duplicate citation Garyfallidis15, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_slr.rst:59: WARNING: duplicate citation Garyfallidis14, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.workflows.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_slr.rst:60: WARNING: duplicate citation Garyfallidis17, other instance in /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_recobundles.rst /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_snr_in_cc.rst:27: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_split.rst:22: WARNING: Option list ends without a blank line; unexpected unindent. /build/reproducible-path/dipy-1.8.0/doc/release_notes/release1.4.1.rst:46: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/release_notes/release1.4.1.rst:81: WARNING: Inline emphasis start-string without end-string. /build/reproducible-path/dipy-1.8.0/doc/release_notes/release1.4.1.rst:82: WARNING: Inline emphasis start-string without end-string. looking for now-outdated files... none found pickling environment... done checking consistency... /build/reproducible-path/dipy-1.8.0/doc/devel/gitwash/dot2_dot3.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/devel/installation_from_source.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/developers.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/gimbal_lock.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/recipes.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/subscribe.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/theory/b_and_q.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/theory/bmatrix.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/theory/gqi.rst: WARNING: document isn't included in any toctree /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_nlmeans.rst:42: WARNING: Citation [Descoteaux08] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_recobundles.rst:69: WARNING: Citation [Chandio2020] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference/dipy.segment.rst:35: WARNING: Citation [Garyfallidis16] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_horizon.rst:69: WARNING: Citation [Horizon_ISMRM19] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_denoise_patch2self.rst:49: WARNING: Citation [Fadnavis20] is not referenced. /build/reproducible-path/dipy-1.8.0/doc/reference_cmd/dipy_evac_plus.rst:37: WARNING: Citation [Park2022] is not referenced. done preparing documents... 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[100%] user_guide/mission /build/reproducible-path/dipy-1.8.0/doc/devel/toolchain.rst:39: WARNING: undefined label: 'https://scientific-python.org/specs' /build/reproducible-path/dipy-1.8.0/doc/index.rst:31: WARNING: 'any' reference target not found: examples_built/index /build/reproducible-path/dipy-1.8.0/doc/index.rst:37: WARNING: more than one target found for 'any' cross-reference 'recipes': could be :doc:`` or :std:ref:`` /build/reproducible-path/dipy-1.8.0/doc/index.rst:75: WARNING: more than one target found for 'any' cross-reference 'stateoftheart': could be :doc:`` or :std:ref:`` /build/reproducible-path/dipy-1.8.0/doc/interfaces/bundlewarp_registration_flow.rst:32: WARNING: citation not found: Chandio23 /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:104: WARNING: Could not obtain image size. :scale: option is ignored. /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:107: WARNING: Could not obtain image size. :scale: option is ignored. /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:150: WARNING: Could not obtain image size. :scale: option is ignored. /build/reproducible-path/dipy-1.8.0/doc/interfaces/denoise_flow.rst:153: WARNING: Could not obtain image size. :scale: option is ignored. /build/reproducible-path/dipy-1.8.0/doc/old_highlights.rst:267: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.8.0/doc/old_highlights.rst:270: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.8.0/doc/old_news.rst:36: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.8.0/doc/recipes.rst:15: WARNING: undefined label: 'sphx_glr_examples_built_file_formats_streamline_formats.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:11: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dti.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:17: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_restore_dti.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:23: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_fwdti.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:29: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:35: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:41: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dki_micro.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:47: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_msdki.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:53: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csa.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:65: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_ivim.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:71: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_ivim.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:83: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dsi.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:89: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_dsid.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:95: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_gqi.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:101: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_sfm.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:107: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csa.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:113: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_shore.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:119: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mapmri.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:125: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mapmri.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:137: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_csd.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:143: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_mcsd.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:149: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_forecast.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:155: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_rumba.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:161: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qti.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:167: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qtiplus.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:179: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_qtdmri.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:191: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_msdki.py' /build/reproducible-path/dipy-1.8.0/doc/reconstruction_models_list.rst:197: WARNING: undefined label: 'sphx_glr_examples_built_reconstruction_reconst_cti.py' /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_vertices:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.octahedron_faces:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_vertices:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/core/sphere.py:docstring of dipy.core.sphere.icosahedron_faces:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_indices:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_rows:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/dti.py:docstring of dipy.reconst.dti._lt_cols:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.nls_iter:1: WARNING: citation not found: Chang2005 /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/reconst/fwdti.py:docstring of dipy.reconst.fwdti.nls_fit_tensor:1: WARNING: citation not found: Chang2005 /build/reproducible-path/dipy-1.8.0/.pybuild/cpython3_3.11_dipy/build/dipy/sims/voxel.py:docstring of dipy.sims.voxel.diffusion_evals:85: WARNING: term not in glossary: 'generic type' /build/reproducible-path/dipy-1.8.0/doc/stateoftheart.rst:7: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.8.0/doc/stateoftheart.rst:24: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.8.0/doc/user_guide/getting_started.rst:41: WARNING: undefined label: 'examples' /build/reproducible-path/dipy-1.8.0/doc/user_guide/introduction.rst:11: WARNING: undefined label: 'examples' generating indices... genindex py-modindex done writing additional pages... search done copying images... [ 17%] devel/gitwash/branch_dropdown.png copying images... [ 33%] devel/gitwash/collaborators.png copying images... [ 50%] devel/gitwash/forking_button.png copying images... [ 67%] theory/spherical_coordinates.png copying images... [ 83%] _static/colorfa.png copying images... [100%] _static/pretty_tracks.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 1390 warnings. The HTML pages are in _build/html. Build finished. The HTML pages are in _build/html. make[2]: Leaving directory '/build/reproducible-path/dipy-1.8.0/doc' # objects inventory is of no use for the package rm doc/_build/html/objects.inv # references to cloudflare and github are privacy breaches sed 's@https://cdnjs\.cloudflare\.com/ajax/libs/mathjax/[^/]\+/@file:///usr/share/javascript/mathjax/unpacked/@' \ -i doc/_build/html/*.html \ doc/_build/html/interfaces/*.html \ doc/_build/html/theory/*.html sed 's@https://cdn\.jsdelivr\.net/npm/mathjax[@]3/es5/tex-mml-chtml\.js@file:///usr/share/nodejs/mathjax-full/es5/tex-mml-chtml.js@' \ -i doc/_build/html/*.html \ doc/_build/html/interfaces/*.html \ doc/_build/html/reference/*.html \ doc/_build/html/theory/*.html # FIXME: references to github are for images part of dipy_data, which # is not available in debian; these may need packaging to solve the # privacy breach here. # Run tests later on # cd build to prevent use of local/not-built source tree set -ex \ ; for PYTHON in 3.12 3.11 \ ; do PYPKG="/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python$PYTHON/dist-packages" \ ; export PYTHONPATH="$PYPKG" \ ; echo "I: Running Dipy unittests using $PYTHON" \ ; cd "$PYPKG" \ ; PATH=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/bin:$PATH \ xvfb-run -a -s "-screen 0 1280x1024x24 -noreset" \ python$PYTHON -m pytest -v -k 'not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py' dipy \ ; rm .pytest_cache -rf \ ; done + for PYTHON in 3.12 3.11 + PYPKG=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages + export PYTHONPATH=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages + PYTHONPATH=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages + echo 'I: Running Dipy unittests using 3.12' I: Running Dipy unittests using 3.12 + cd /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages + PATH=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + xvfb-run -a -s '-screen 0 1280x1024x24 -noreset' python3.12 -m pytest -v -k 'not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py' dipy ============================= test session starts ============================== platform linux -- Python 3.12.3, pytest-7.4.4, pluggy-1.5.0 -- /usr/bin/python3.12 cachedir: .pytest_cache rootdir: /build/reproducible-path/dipy-1.8.0 configfile: pyproject.toml collecting ... collected 973 items dipy/align/tests/test_api.py::test_syn_registration SKIPPED (test ne...) 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[ 99%] dipy/workflows/tests/test_workflow.py::test_force_overwrite PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_get_sub_runs PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_run PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_missing_file PASSED [100%] =============================== warnings summary =============================== dipy/reconst/qti.py:19 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:19: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. dipy/reconst/qti.py:57 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:57: SyntaxWarning: invalid escape sequence '\m' """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. dipy/reconst/qti.py:91 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:91: SyntaxWarning: invalid escape sequence '\m' """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. dipy/reconst/qti.py:137 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:137: SyntaxWarning: invalid escape sequence '\m' """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. dipy/reconst/qti.py:187 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:187: SyntaxWarning: invalid escape sequence '\m' """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. dipy/reconst/qti.py:222 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:222: SyntaxWarning: invalid escape sequence '\m' """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. dipy/reconst/qti.py:280 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:280: SyntaxWarning: invalid escape sequence '\m' """Calculate covariance of a diffusion tensor distribution (DTD). dipy/reconst/qti.py:323 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:323: SyntaxWarning: invalid escape sequence '\e' """Generate signals using the covariance tensor signal representation. dipy/reconst/qti.py:395 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:395: SyntaxWarning: invalid escape sequence '\m' """Calculate the design matrix from the b-tensors. dipy/reconst/qti.py:761 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:761: SyntaxWarning: invalid escape sequence '\l' """Mean diffusivity. dipy/reconst/qti.py:783 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:783: SyntaxWarning: invalid escape sequence '\m' """Variance of microscopic mean diffusivities. dipy/reconst/qti.py:805 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:805: SyntaxWarning: invalid escape sequence '\m' """Shear variance. dipy/reconst/qti.py:827 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:827: SyntaxWarning: invalid escape sequence '\m' """Total isotropic variance. dipy/reconst/qti.py:863 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:863: SyntaxWarning: invalid escape sequence '\l' """Average of microscopic diffusion tensors' outer products with dipy/reconst/qti.py:886 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:886: SyntaxWarning: invalid escape sequence '\m' """Normalized variance of mean diffusivities. dipy/reconst/qti.py:909 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:909: SyntaxWarning: invalid escape sequence '\m' """Normalized microscopic anisotropy. dipy/reconst/qti.py:934 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:934: SyntaxWarning: invalid escape sequence '\m' """Microscopic fractional anisotropy. dipy/reconst/qti.py:953 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:953: SyntaxWarning: invalid escape sequence '\l' """Normalized macroscopic anisotropy. dipy/reconst/qti.py:979 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:979: SyntaxWarning: invalid escape sequence '\s' """Fractional anisotropy. dipy/reconst/qti.py:998 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:998: SyntaxWarning: invalid escape sequence '\m' """Microscopic orientation coherence. dipy/reconst/qti.py:1036 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1036: SyntaxWarning: invalid escape sequence '\m' """Bulk kurtosis. dipy/reconst/qti.py:1061 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1061: SyntaxWarning: invalid escape sequence '\m' """Shear kurtosis. dipy/reconst/qti.py:1086 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/qti.py:1086: SyntaxWarning: invalid escape sequence '\m' """Microscopic kurtosis. debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/tests/test_reslice.py: 17 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/tests/test_gibbs.py: 28 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/tests/test_peaks.py: 76 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_sfm.py: 16 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/tests/test_parallel.py: 26 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_denoise.py: 1 warning debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_reconst_csa_csd.py: 12 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/workflows/tests/test_reconst_rumba.py: 13 warnings /usr/lib/python3.12/multiprocessing/popen_fork.py:66: DeprecationWarning: This process (pid=58596) is multi-threaded, use of fork() may lead to deadlocks in the child. self.pid = os.fork() debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_mapmri.py: 8 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_qtdmri.py: 3 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_shore.py: 1 warning debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_shore_metrics.py: 2 warnings debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_shore_odf.py: 1 warning /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/core/geometry.py:130: RuntimeWarning: invalid value encountered in arccos theta = np.arccos(np.divide(z, r, where=r > 0)) debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/tests/test_sfm.py::test_sfm /usr/lib/python3/dist-packages/joblib/externals/loky/backend/fork_exec.py:38: DeprecationWarning: This process (pid=58596) is multi-threaded, use of fork() may lead to deadlocks in the child. pid = os.fork() -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========= 810 passed, 163 skipped, 228 warnings in 16444.46s (4:34:04) ========= + rm .pytest_cache -rf + for PYTHON in 3.12 3.11 + PYPKG=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages + export PYTHONPATH=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages + PYTHONPATH=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages + echo 'I: Running Dipy unittests using 3.11' I: Running Dipy unittests using 3.11 + cd /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages + PATH=/build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path + xvfb-run -a -s '-screen 0 1280x1024x24 -noreset' python3.11 -m pytest -v -k 'not dipy/align/tests/test_streamwarp.py and not dipy/denoise/tests/test_lpca.py and not dipy/reconst/tests/test_sfm.py and not dipy/workflows/tests/test_reconst_csa_csd.py and not dipy/workflows/tests/test_reconst_rumba.py' dipy ============================= test session starts ============================== platform linux -- Python 3.11.9, pytest-7.4.4, pluggy-1.5.0 -- /usr/bin/python3.11 cachedir: 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[ 93%] dipy/workflows/tests/test_align.py::test_reslice PASSED [ 93%] dipy/workflows/tests/test_align.py::test_slr_flow PASSED [ 93%] dipy/workflows/tests/test_align.py::test_image_registration PASSED [ 93%] dipy/workflows/tests/test_align.py::test_apply_transform_error PASSED [ 93%] dipy/workflows/tests/test_align.py::test_apply_affine_transform PASSED [ 93%] dipy/workflows/tests/test_align.py::test_motion_correction PASSED [ 93%] dipy/workflows/tests/test_align.py::test_syn_registration_flow PASSED [ 93%] dipy/workflows/tests/test_align.py::test_bundlewarp_flow PASSED [ 93%] dipy/workflows/tests/test_denoise.py::test_nlmeans_flow PASSED [ 93%] dipy/workflows/tests/test_denoise.py::test_patch2self_flow PASSED [ 94%] dipy/workflows/tests/test_denoise.py::test_lpca_flow PASSED [ 94%] dipy/workflows/tests/test_denoise.py::test_mppca_flow PASSED [ 94%] dipy/workflows/tests/test_denoise.py::test_gibbs_flow PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_signature PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_summary PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_extended_summary PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_parameters PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_other_parameters PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_returns PASSED [ 94%] dipy/workflows/tests/test_docstring_parser.py::test_notes PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_references PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_examples PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_index PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_str PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_parameters_without_extended_description PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_raises PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_warns PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_see_also PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_empty_first_line PASSED [ 95%] dipy/workflows/tests/test_docstring_parser.py::test_duplicate_signature PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_none_or_dtype PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_variable_type PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_iap PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_optional_str PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_iap_epilog_and_description PASSED [ 96%] dipy/workflows/tests/test_iap.py::test_flow_runner PASSED [ 96%] dipy/workflows/tests/test_io.py::test_io_info PASSED [ 96%] dipy/workflows/tests/test_io.py::test_io_fetch SKIPPED (test needs i...) 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[ 97%] dipy/workflows/tests/test_reconst_csa_csd.py::test_reconst_csa PASSED [ 97%] dipy/workflows/tests/test_reconst_csa_csd.py::test_reconst_csd PASSED [ 97%] dipy/workflows/tests/test_reconst_dki.py::test_reconst_dki PASSED [ 97%] dipy/workflows/tests/test_reconst_dti.py::test_reconst_dti_wls PASSED [ 97%] dipy/workflows/tests/test_reconst_dti.py::test_reconst_dti_nlls PASSED [ 97%] dipy/workflows/tests/test_reconst_dti.py::test_reconst_dti_alt_tensor PASSED [ 97%] dipy/workflows/tests/test_reconst_ivim.py::test_reconst_ivim PASSED [ 98%] dipy/workflows/tests/test_reconst_mapmri.py::test_reconst_mmri_laplacian PASSED [ 98%] dipy/workflows/tests/test_reconst_mapmri.py::test_reconst_mmri_none PASSED [ 98%] dipy/workflows/tests/test_reconst_mapmri.py::test_reconst_mmri_both SKIPPED [ 98%] dipy/workflows/tests/test_reconst_mapmri.py::test_reconst_mmri_positivity SKIPPED [ 98%] dipy/workflows/tests/test_reconst_rumba.py::test_reconst_rumba PASSED [ 98%] dipy/workflows/tests/test_segment.py::test_median_otsu_flow PASSED [ 98%] dipy/workflows/tests/test_segment.py::test_recobundles_flow PASSED [ 98%] dipy/workflows/tests/test_stats.py::test_stats PASSED [ 98%] dipy/workflows/tests/test_stats.py::test_buan_bundle_profiles SKIPPED [ 98%] dipy/workflows/tests/test_stats.py::test_bundle_analysis_tractometry_flow SKIPPED [ 99%] dipy/workflows/tests/test_stats.py::test_linear_mixed_models_flow SKIPPED [ 99%] dipy/workflows/tests/test_stats.py::test_bundle_shape_analysis_flow SKIPPED [ 99%] dipy/workflows/tests/test_tracking.py::test_particle_filtering_tracking_workflows PASSED [ 99%] dipy/workflows/tests/test_tracking.py::test_local_fiber_tracking_workflow PASSED [ 99%] dipy/workflows/tests/test_viz.py::test_horizon_flow SKIPPED (Require...) [ 99%] dipy/workflows/tests/test_workflow.py::test_force_overwrite PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_get_sub_runs PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_run PASSED [ 99%] dipy/workflows/tests/test_workflow.py::test_missing_file PASSED [100%] =============================== warnings summary =============================== dipy/reconst/qti.py:19 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:19: DeprecationWarning: invalid escape sequence '\m' """Convert symmetric 3 x 3 matrices into 6 x 1 vectors. dipy/reconst/qti.py:57 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:57: DeprecationWarning: invalid escape sequence '\m' """Convert 6 x 1 vectors into symmetric 3 x 3 matrices. dipy/reconst/qti.py:91 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:91: DeprecationWarning: invalid escape sequence '\m' """Convert symmetric 6 x 6 matrices into 21 x 1 vectors. dipy/reconst/qti.py:137 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:137: DeprecationWarning: invalid escape sequence '\m' """Convert 21 x 1 vectors into symmetric 6 x 6 matrices. dipy/reconst/qti.py:187 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:187: DeprecationWarning: invalid escape sequence '\m' """Convert a 1 x 6 vector into a symmetric 3 x 3 matrix. dipy/reconst/qti.py:222 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:222: DeprecationWarning: invalid escape sequence '\m' """Convert 1 x 21 vector into a symmetric 6 x 6 matrix. dipy/reconst/qti.py:280 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:280: DeprecationWarning: invalid escape sequence '\m' """Calculate covariance of a diffusion tensor distribution (DTD). dipy/reconst/qti.py:323 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:323: DeprecationWarning: invalid escape sequence '\e' """Generate signals using the covariance tensor signal representation. dipy/reconst/qti.py:395 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:395: DeprecationWarning: invalid escape sequence '\m' """Calculate the design matrix from the b-tensors. dipy/reconst/qti.py:761 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:761: DeprecationWarning: invalid escape sequence '\l' """Mean diffusivity. dipy/reconst/qti.py:783 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:783: DeprecationWarning: invalid escape sequence '\m' """Variance of microscopic mean diffusivities. dipy/reconst/qti.py:805 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:805: DeprecationWarning: invalid escape sequence '\m' """Shear variance. dipy/reconst/qti.py:827 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:827: DeprecationWarning: invalid escape sequence '\m' """Total isotropic variance. dipy/reconst/qti.py:863 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:863: DeprecationWarning: invalid escape sequence '\l' """Average of microscopic diffusion tensors' outer products with dipy/reconst/qti.py:886 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:886: DeprecationWarning: invalid escape sequence '\m' """Normalized variance of mean diffusivities. dipy/reconst/qti.py:909 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:909: DeprecationWarning: invalid escape sequence '\m' """Normalized microscopic anisotropy. dipy/reconst/qti.py:934 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:934: DeprecationWarning: invalid escape sequence '\m' """Microscopic fractional anisotropy. dipy/reconst/qti.py:953 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:953: DeprecationWarning: invalid escape sequence '\l' """Normalized macroscopic anisotropy. dipy/reconst/qti.py:979 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:979: DeprecationWarning: invalid escape sequence '\s' """Fractional anisotropy. dipy/reconst/qti.py:998 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:998: DeprecationWarning: invalid escape sequence '\m' """Microscopic orientation coherence. dipy/reconst/qti.py:1036 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1036: DeprecationWarning: invalid escape sequence '\m' """Bulk kurtosis. dipy/reconst/qti.py:1061 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1061: DeprecationWarning: invalid escape sequence '\m' """Shear kurtosis. dipy/reconst/qti.py:1086 /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/qti.py:1086: DeprecationWarning: invalid escape sequence '\m' """Microscopic kurtosis. debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/tests/test_forecast.py: 13 warnings debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/tests/test_mapmri.py: 15 warnings debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/tests/test_qtdmri.py: 1 warning debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/tests/test_shore.py: 1 warning debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/tests/test_shore_metrics.py: 2 warnings debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/tests/test_shore_odf.py: 1 warning /build/reproducible-path/dipy-1.8.0/debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/core/geometry.py:130: RuntimeWarning: invalid value encountered in arccos theta = np.arccos(np.divide(z, r, where=r > 0)) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========= 810 passed, 163 skipped, 56 warnings in 12562.56s (3:29:22) ========== + rm .pytest_cache -rf # Cleanup files landing unnecessarily in the python3 modules directory. rm -v debian/python3-dipy/usr/lib/python3*/dist-packages/*.nii.gz removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dirs.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/gfa.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/inc_static.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/indices.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/shm.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/values.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dirs.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/gfa.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/inc_static.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/indices.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/shm.nii.gz' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/values.nii.gz' rm -v debian/python3-dipy/usr/lib/python3*/dist-packages/*.trk removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moved.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moved_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/moving_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/recognized_orig.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/static_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/tractogram.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moved.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moved_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/moving_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/recognized_orig.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/static_centroids.trk' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/tractogram.trk' rm -v debian/python3-dipy/usr/lib/python3*/dist-packages/affine.txt removed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/affine.txt' removed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/affine.txt' # Cleanup files landing in non-standard path rm -rv debian/python3-dipy/usr/doc removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_introduction_eudx.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_roi_contour.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_mapmri.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_cti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_clustering_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/linear_fascicle_evaluation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reslice_datasets.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_sfm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/restore_dti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_fwdti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/motion_correction.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_tools.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/simulate_multi_tensor.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_patch2self.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_probabilistic.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_nlmeans.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/surface_seed.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/fast_streamline_search.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_shape_similarity.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/histology_resdnn.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_ascm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/combined_workflow_creation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_msdki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_formats.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/brain_extraction_dwi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tissue_classification.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundlewarp_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_advanced.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/fiber_to_bundle_coherence.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_deterministic.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_assignment_maps.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsid.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/affine_registration_3d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csa_parallel.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csd.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/snr_in_cc.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_ptt.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/kfold_xval.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_shore.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_rumba.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_gqi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_group_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_sh.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/afq_tract_profiles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/simulate_dki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csa.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/quick_start.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_sfm.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_shore_metrics.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/syn_registration_3d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dki.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/gradients_spheres.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_gibbs.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dki_micro.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsi.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/streamline_length.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_mcsd.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/syn_registration_2d.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_forecast.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_registration.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_stopping_criterion.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qtdmri.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_quickbundles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_bootstrap_peaks.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_bundles.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_csd_parallel.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/tracking_pft.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/contextual_enhancement.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/affine_registration_masks.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/path_length_map.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_rumba.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/register_binary_fuzzy.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_ivim.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/cluster_confidence.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qti.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_mppca.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/piesno.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/workflow_creation.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/denoise_localpca.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_clustering_features.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/segment_extending_clustering_framework.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/bundle_extraction.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/viz_slice.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_qtiplus.py' removed 'debian/python3-dipy/usr/doc/dipy/examples/reconst_dsi_metrics.py' removed directory 'debian/python3-dipy/usr/doc/dipy/examples' removed directory 'debian/python3-dipy/usr/doc/dipy' removed directory 'debian/python3-dipy/usr/doc' make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installdocs: warning: Cannot auto-detect main package for python-dipy-doc. If the default is wrong, please use --doc-main-package dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_python3 make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' set -e \ ; test -d debian/python3-dipy/usr/lib || exit 0 \ ; for lib in $(find debian/python3-dipy/usr/lib -name "*.so") \ ; do sdir=$(dirname $lib) \ ; tdir=debian/python3-dipy-lib/${sdir#*python3-dipy/} \ ; mkdir -p "${tdir}" \ ; mv -v "${lib}" "${tdir}" \ ; done renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/ptt_direction_getter.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/pmf.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/pmf.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/sumsqdiff.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/bundlemin.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/bundlemin.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/parzenhist.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/parzenhist.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/transforms.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/transforms.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/crosscorr.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/crosscorr.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/expectmax.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/expectmax.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/align/vector_fields.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/align/vector_fields.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/distances.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/distances.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/localtrack.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/propspeed.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/streamlinespeed.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/fbcmeasures.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/vox2track.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/direction_getter.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/tracking/stopping_criterion.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/mrf.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/mrf.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/featurespeed.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/clusteringspeed.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/cythonutils.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/metricspeed.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/segment/clustering_algorithms.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/shift_twist_convolution.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/pca_noise_estimate.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/denspeed.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/nlmeans_block.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/denoise/enhancement_kernel.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/quick_squash.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/eudx_direction_getter.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/recspeed.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/reconst/vec_val_sum.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/core/interpolation.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/core/interpolation.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/utils/omp.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/utils/omp.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.11/dist-packages/dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.11/dist-packages/dipy/utils/fast_numpy.cpython-311-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/bootstrap_direction_getter.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/probabilistic_direction_getter.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/ptt_direction_getter.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/pmf.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/pmf.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/direction/closest_peak_direction_getter.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/bundlemin.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/bundlemin.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/vector_fields.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/vector_fields.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/transforms.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/transforms.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/parzenhist.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/parzenhist.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/expectmax.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/expectmax.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/sumsqdiff.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/align/crosscorr.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/align/crosscorr.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/direction_getter.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/streamlinespeed.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/vox2track.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/localtrack.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/fbcmeasures.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/propspeed.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/distances.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/distances.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/tracking/stopping_criterion.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/clusteringspeed.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/featurespeed.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/cythonutils.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/clustering_algorithms.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/metricspeed.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/segment/mrf.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/segment/mrf.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/pca_noise_estimate.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/shift_twist_convolution.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/denspeed.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/enhancement_kernel.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/denoise/nlmeans_block.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/eudx_direction_getter.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/vec_val_sum.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/quick_squash.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/reconst/recspeed.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/core/interpolation.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/core/interpolation.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/omp.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/omp.cpython-312-i386-linux-gnu.so' renamed 'debian/python3-dipy/usr/lib/python3.12/dist-packages/dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so' -> 'debian/python3-dipy-lib/usr/lib/python3.12/dist-packages/dipy/utils/fast_numpy.cpython-312-i386-linux-gnu.so' dh_numpy3 -ppython3-dipy-lib dh_python3 I: dh_python3 pydist:325: Ignoring complex environment marker: tomli; python_version < "3.11" and extra == "doc" make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild debian/rules execute_before_dh_link-indep make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' rm -v debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/doctools.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/doctools.js' rm -v debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/language_data.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/language_data.js' rm -v debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/searchtools.js removed 'debian/python-dipy-doc/usr/share/doc/python-dipy-doc/html/_static/searchtools.js' make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild debian/rules override_dh_compress make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' dh_compress -X.py -X.html -X.css -X.jpg -X.txt -X.js -X.json -X.rtc \ -X.par -X.bin -Xobjects.inv make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' dh_fixperms -O--buildsystem=pybuild debian/rules execute_after_dh_fixperms-arch make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' # Fix a couple of executables neither elf nor scripts. find debian/python3-dipy/usr/lib/python3*/dist-packages/ \ -name '*.py' \ -exec chmod -x '{}' '+' make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' dh_missing -O--buildsystem=pybuild debian/rules override_dh_dwz make[1]: Entering directory '/build/reproducible-path/dipy-1.8.0' dh_dwz || true make[1]: Leaving directory '/build/reproducible-path/dipy-1.8.0' dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package python3-dipy: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: package python3-dipy: substitution variable ${python3:Versions} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy-lib: substitution variable ${python3:Provides} used, but is not defined dpkg-gencontrol: warning: Provides field of package python3-dipy-lib: substitution variable ${python3:Provides} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-dipy-lib-dbgsym' in '../python3-dipy-lib-dbgsym_1.8.0-2_i386.deb'. dpkg-deb: building package 'python3-dipy' in '../python3-dipy_1.8.0-2_all.deb'. dpkg-deb: building package 'python3-dipy-lib' in '../python3-dipy-lib_1.8.0-2_i386.deb'. dpkg-deb: building package 'python-dipy-doc' in '../python-dipy-doc_1.8.0-2_all.deb'. dpkg-genbuildinfo --build=binary -O../dipy_1.8.0-2_i386.buildinfo dpkg-genchanges --build=binary -O../dipy_1.8.0-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from dipy-1.8.0/debian/source/options: --extend-diff-ignore=(^|/)dipy/COMMIT_INFO.txt$ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/43414/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/43414/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/43414 and its subdirectories I: Current time: Wed May 8 10:06:01 +14 2024 I: pbuilder-time-stamp: 1715112361