I: pbuilder: network access will be disabled during build I: Current time: Fri Oct 11 15:31:32 +14 2024 I: pbuilder-time-stamp: 1728610292 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dcm2niix_1.0.20240202-1.dsc] I: copying [./dcm2niix_1.0.20240202.orig-debian-tests-data.tar.gz] I: copying [./dcm2niix_1.0.20240202.orig.tar.gz] I: copying [./dcm2niix_1.0.20240202-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Aug 6 12:33:23 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dcm2niix_1.0.20240202-1.dsc: no acceptable signature found dpkg-source: info: extracting dcm2niix in dcm2niix-1.0.20240202 dpkg-source: info: unpacking dcm2niix_1.0.20240202.orig.tar.gz dpkg-source: info: unpacking dcm2niix_1.0.20240202.orig-debian-tests-data.tar.gz dpkg-source: info: unpacking dcm2niix_1.0.20240202-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/24684/tmp/hooks/D01_modify_environment starting debug: Running on virt32z. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Oct 11 01:31 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/24684/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/24684/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="32" [3]="1" [4]="release" [5]="arm-unknown-linux-gnueabihf") BASH_VERSION='5.2.32(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=armhf DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=4 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=arm HOST_ARCH=armhf IFS=' ' INVOCATION_ID=dfc88540e94649e7bd03699325057a85 LANG=C LANGUAGE=it_CH:it LC_ALL=C MACHTYPE=arm-unknown-linux-gnueabihf MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnueabihf PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=24684 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XfCgt6WZ/pbuilderrc_NZdS --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XfCgt6WZ/b2 --logfile b2/build.log dcm2niix_1.0.20240202-1.dsc' SUDO_GID=110 SUDO_UID=103 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://10.0.0.15:3142/ I: uname -a Linux i-capture-the-hostname 6.1.0-26-armmp-lpae #1 SMP Debian 6.1.112-1 (2024-09-30) armv7l GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/24684/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake, debhelper-compat (= 13), libopenjp2-7-dev, libturbojpeg0-dev, libyaml-cpp-dev, pkgconf, python3-sphinx:native, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19508 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libopenjp2-7-dev; however: Package libopenjp2-7-dev is not installed. pbuilder-satisfydepends-dummy depends on libturbojpeg0-dev; however: Package libturbojpeg0-dev is not installed. pbuilder-satisfydepends-dummy depends on libyaml-cpp-dev; however: Package libyaml-cpp-dev is not installed. pbuilder-satisfydepends-dummy depends on pkgconf; however: Package pkgconf is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx:native. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libopenjp2-7{a} libopenjp2-7-dev{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libturbojpeg0{a} libturbojpeg0-dev{a} libuchardet0{a} libuv1t64{a} libxml2{a} libyaml-cpp-dev{a} libyaml-cpp0.8{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} python-babel-localedata{a} python3{a} python3-alabaster{a} python3-autocommand{a} python3-babel{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-defusedxml{a} python3-docutils{a} python3-idna{a} python3-imagesize{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jinja2{a} python3-markupsafe{a} python3-minimal{a} python3-more-itertools{a} python3-packaging{a} python3-pkg-resources{a} python3-pygments{a} python3-requests{a} python3-roman{a} python3-snowballstemmer{a} python3-sphinx{a} python3-typeguard{a} python3-typing-extensions{a} python3-urllib3{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tzdata{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common krb5-locales libarchive-cpio-perl libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix python3-pil wget 0 packages upgraded, 115 newly installed, 0 to remove and 0 not upgraded. Need to get 50.0 MB of archives. After unpacking 194 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main armhf libpython3.12-minimal armhf 3.12.6-1 [800 kB] Get: 2 http://deb.debian.org/debian trixie/main armhf libexpat1 armhf 2.6.3-1 [83.2 kB] Get: 3 http://deb.debian.org/debian trixie/main armhf python3.12-minimal armhf 3.12.6-1 [1812 kB] Get: 4 http://deb.debian.org/debian trixie/main armhf python3-minimal armhf 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main armhf media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main armhf netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main armhf tzdata all 2024a-4 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main armhf libkrb5support0 armhf 1.21.3-3 [30.0 kB] Get: 9 http://deb.debian.org/debian trixie/main armhf libcom-err2 armhf 1.47.1-1 [22.1 kB] Get: 10 http://deb.debian.org/debian trixie/main armhf libk5crypto3 armhf 1.21.3-3 [75.8 kB] Get: 11 http://deb.debian.org/debian trixie/main armhf libkeyutils1 armhf 1.6.3-3 [7908 B] Get: 12 http://deb.debian.org/debian trixie/main armhf libkrb5-3 armhf 1.21.3-3 [283 kB] Get: 13 http://deb.debian.org/debian trixie/main armhf libgssapi-krb5-2 armhf 1.21.3-3 [114 kB] Get: 14 http://deb.debian.org/debian trixie/main armhf libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main armhf libtirpc3t64 armhf 1.3.4+ds-1.3 [71.1 kB] Get: 16 http://deb.debian.org/debian trixie/main armhf libnsl2 armhf 1.3.0-3+b2 [34.9 kB] Get: 17 http://deb.debian.org/debian trixie/main armhf readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main armhf libreadline8t64 armhf 8.2-5 [146 kB] Get: 19 http://deb.debian.org/debian trixie/main armhf libpython3.12-stdlib armhf 3.12.6-1 [1817 kB] Get: 20 http://deb.debian.org/debian trixie/main armhf python3.12 armhf 3.12.6-1 [669 kB] Get: 21 http://deb.debian.org/debian trixie/main armhf libpython3-stdlib armhf 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main armhf python3 armhf 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main armhf sgml-base all 1.31 [15.4 kB] Get: 24 http://deb.debian.org/debian trixie/main armhf libproc2-0 armhf 2:4.0.4-6 [56.0 kB] Get: 25 http://deb.debian.org/debian trixie/main armhf procps armhf 2:4.0.4-6 [864 kB] Get: 26 http://deb.debian.org/debian trixie/main armhf sensible-utils all 0.0.24 [24.8 kB] Get: 27 http://deb.debian.org/debian trixie/main armhf openssl armhf 3.3.2-1 [1348 kB] Get: 28 http://deb.debian.org/debian trixie/main armhf ca-certificates all 20240203 [158 kB] Get: 29 http://deb.debian.org/debian trixie/main armhf libmagic-mgc armhf 1:5.45-3 [314 kB] Get: 30 http://deb.debian.org/debian trixie/main armhf libmagic1t64 armhf 1:5.45-3 [98.1 kB] Get: 31 http://deb.debian.org/debian trixie/main armhf file armhf 1:5.45-3 [42.0 kB] Get: 32 http://deb.debian.org/debian trixie/main armhf gettext-base armhf 0.22.5-2 [195 kB] Get: 33 http://deb.debian.org/debian trixie/main armhf libuchardet0 armhf 0.0.8-1+b1 [65.7 kB] Get: 34 http://deb.debian.org/debian trixie/main armhf groff-base armhf 1.23.0-5 [1091 kB] Get: 35 http://deb.debian.org/debian trixie/main armhf bsdextrautils armhf 2.40.2-8 [88.8 kB] Get: 36 http://deb.debian.org/debian trixie/main armhf libpipeline1 armhf 1.5.8-1 [35.0 kB] Get: 37 http://deb.debian.org/debian trixie/main armhf man-db armhf 2.13.0-1 [1382 kB] Get: 38 http://deb.debian.org/debian trixie/main armhf m4 armhf 1.4.19-4 [264 kB] Get: 39 http://deb.debian.org/debian trixie/main armhf autoconf all 2.72-3 [493 kB] Get: 40 http://deb.debian.org/debian trixie/main armhf autotools-dev all 20220109.1 [51.6 kB] Get: 41 http://deb.debian.org/debian trixie/main armhf automake all 1:1.16.5-1.3 [823 kB] Get: 42 http://deb.debian.org/debian trixie/main armhf autopoint all 0.22.5-2 [723 kB] Get: 43 http://deb.debian.org/debian trixie/main armhf cmake-data all 3.30.4-1 [2223 kB] Get: 44 http://deb.debian.org/debian trixie/main armhf libicu72 armhf 72.1-5 [9075 kB] Get: 45 http://deb.debian.org/debian trixie/main armhf libxml2 armhf 2.12.7+dfsg+really2.9.14-0.1 [604 kB] Get: 46 http://deb.debian.org/debian trixie/main armhf libarchive13t64 armhf 3.7.4-1 [305 kB] Get: 47 http://deb.debian.org/debian trixie/main armhf libbrotli1 armhf 1.1.0-2+b4 [293 kB] Get: 48 http://deb.debian.org/debian trixie/main armhf libsasl2-modules-db armhf 2.1.28+dfsg1-8 [18.2 kB] Get: 49 http://deb.debian.org/debian trixie/main armhf libsasl2-2 armhf 2.1.28+dfsg1-8 [50.2 kB] Get: 50 http://deb.debian.org/debian trixie/main armhf libldap-2.5-0 armhf 2.5.18+dfsg-3 [163 kB] Get: 51 http://deb.debian.org/debian trixie/main armhf libnghttp2-14 armhf 1.63.0-1 [62.9 kB] Get: 52 http://deb.debian.org/debian trixie/main armhf libpsl5t64 armhf 0.21.2-1.1 [55.6 kB] Get: 53 http://deb.debian.org/debian trixie/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b4 [53.2 kB] Get: 54 http://deb.debian.org/debian trixie/main armhf libssh2-1t64 armhf 1.11.0-7 [199 kB] Get: 55 http://deb.debian.org/debian trixie/main armhf libcurl4t64 armhf 8.10.1-1 [303 kB] Get: 56 http://deb.debian.org/debian trixie/main armhf libjsoncpp26 armhf 1.9.6-2 [70.0 kB] Get: 57 http://deb.debian.org/debian trixie/main armhf librhash1 armhf 1.4.4-3 [143 kB] Get: 58 http://deb.debian.org/debian trixie/main armhf libuv1t64 armhf 1.48.0-6 [134 kB] Get: 59 http://deb.debian.org/debian trixie/main armhf cmake armhf 3.30.4-1+b1 [5368 kB] Get: 60 http://deb.debian.org/debian trixie/main armhf libdebhelper-perl all 13.20 [89.7 kB] Get: 61 http://deb.debian.org/debian trixie/main armhf libtool all 2.4.7-7 [517 kB] Get: 62 http://deb.debian.org/debian trixie/main armhf dh-autoreconf all 20 [17.1 kB] Get: 63 http://deb.debian.org/debian trixie/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 64 http://deb.debian.org/debian trixie/main armhf libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 65 http://deb.debian.org/debian trixie/main armhf dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 66 http://deb.debian.org/debian trixie/main armhf libelf1t64 armhf 0.191-2 [183 kB] Get: 67 http://deb.debian.org/debian trixie/main armhf dwz armhf 0.15-1+b2 [106 kB] Get: 68 http://deb.debian.org/debian trixie/main armhf gettext armhf 0.22.5-2 [1485 kB] Get: 69 http://deb.debian.org/debian trixie/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 70 http://deb.debian.org/debian trixie/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 71 http://deb.debian.org/debian trixie/main armhf debhelper all 13.20 [915 kB] Get: 72 http://deb.debian.org/debian trixie/main armhf xml-core all 0.19 [20.1 kB] Get: 73 http://deb.debian.org/debian trixie/main armhf docutils-common all 0.21.2+dfsg-2 [128 kB] Get: 74 http://deb.debian.org/debian trixie/main armhf libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 75 http://deb.debian.org/debian trixie/main armhf libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 76 http://deb.debian.org/debian trixie/main armhf libjs-sphinxdoc all 7.4.7-3 [158 kB] Get: 77 http://deb.debian.org/debian trixie/main armhf libjson-perl all 4.10000-1 [87.5 kB] Get: 78 http://deb.debian.org/debian trixie/main armhf libopenjp2-7 armhf 2.5.0-2+b3 [170 kB] Get: 79 http://deb.debian.org/debian trixie/main armhf libopenjp2-7-dev armhf 2.5.0-2+b3 [242 kB] Get: 80 http://deb.debian.org/debian trixie/main armhf libpkgconf3 armhf 1.8.1-3 [31.7 kB] Get: 81 http://deb.debian.org/debian trixie/main armhf libturbojpeg0 armhf 1:2.1.5-3 [179 kB] Get: 82 http://deb.debian.org/debian trixie/main armhf libturbojpeg0-dev armhf 1:2.1.5-3 [200 kB] Get: 83 http://deb.debian.org/debian trixie/main armhf libyaml-cpp0.8 armhf 0.8.0+dfsg-6+b1 [112 kB] Get: 84 http://deb.debian.org/debian trixie/main armhf libyaml-cpp-dev armhf 0.8.0+dfsg-6+b1 [161 kB] Get: 85 http://deb.debian.org/debian trixie/main armhf pkgconf-bin armhf 1.8.1-3 [29.1 kB] Get: 86 http://deb.debian.org/debian trixie/main armhf pkgconf armhf 1.8.1-3 [26.1 kB] Get: 87 http://deb.debian.org/debian trixie/main armhf python-babel-localedata all 2.14.0-1 [5701 kB] Get: 88 http://deb.debian.org/debian trixie/main armhf python3-alabaster all 0.7.16-0.1 [27.9 kB] Get: 89 http://deb.debian.org/debian trixie/main armhf python3-autocommand all 2.2.2-3 [13.6 kB] Get: 90 http://deb.debian.org/debian trixie/main armhf python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 91 http://deb.debian.org/debian trixie/main armhf python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 92 http://deb.debian.org/debian trixie/main armhf python3-typeguard all 4.3.0-1 [36.5 kB] Get: 93 http://deb.debian.org/debian trixie/main armhf python3-inflect all 7.3.1-2 [32.4 kB] Get: 94 http://deb.debian.org/debian trixie/main armhf python3-jaraco.context all 6.0.0-1 [7984 B] Get: 95 http://deb.debian.org/debian trixie/main armhf python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 96 http://deb.debian.org/debian trixie/main armhf python3-pkg-resources all 74.1.2-2 [213 kB] Get: 97 http://deb.debian.org/debian trixie/main armhf python3-babel all 2.14.0-1 [111 kB] Get: 98 http://deb.debian.org/debian trixie/main armhf python3-certifi all 2024.8.30-1 [159 kB] Get: 99 http://deb.debian.org/debian trixie/main armhf python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 100 http://deb.debian.org/debian trixie/main armhf python3-charset-normalizer armhf 3.3.2-4 [109 kB] Get: 101 http://deb.debian.org/debian trixie/main armhf python3-defusedxml all 0.7.1-2 [43.3 kB] Get: 102 http://deb.debian.org/debian trixie/main armhf python3-roman all 4.2-1 [10.4 kB] Get: 103 http://deb.debian.org/debian trixie/main armhf python3-docutils all 0.21.2+dfsg-2 [403 kB] Get: 104 http://deb.debian.org/debian trixie/main armhf python3-idna all 3.8-2 [41.6 kB] Get: 105 http://deb.debian.org/debian trixie/main armhf python3-imagesize all 1.4.1-1 [6688 B] Get: 106 http://deb.debian.org/debian trixie/main armhf python3-markupsafe armhf 2.1.5-1+b1 [13.2 kB] Get: 107 http://deb.debian.org/debian trixie/main armhf python3-jinja2 all 3.1.3-1 [119 kB] Get: 108 http://deb.debian.org/debian trixie/main armhf python3-packaging all 24.1-1 [45.8 kB] Get: 109 http://deb.debian.org/debian trixie/main armhf python3-pygments all 2.18.0+dfsg-1 [836 kB] Get: 110 http://deb.debian.org/debian trixie/main armhf python3-urllib3 all 2.0.7-2 [111 kB] Get: 111 http://deb.debian.org/debian trixie/main armhf python3-requests all 2.32.3+dfsg-1 [71.9 kB] Get: 112 http://deb.debian.org/debian trixie/main armhf python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 113 http://deb.debian.org/debian trixie/main armhf sphinx-common all 7.4.7-3 [731 kB] Get: 114 http://deb.debian.org/debian trixie/main armhf python3-sphinx all 7.4.7-3 [588 kB] Get: 115 http://deb.debian.org/debian trixie/main armhf zlib1g-dev armhf 1:1.3.dfsg+really1.3.1-1 [904 kB] Fetched 50.0 MB in 1s (81.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19508 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.6-1_armhf.deb ... Unpacking libpython3.12-minimal:armhf (3.12.6-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../libexpat1_2.6.3-1_armhf.deb ... Unpacking libexpat1:armhf (2.6.3-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.6-1_armhf.deb ... Unpacking python3.12-minimal (3.12.6-1) ... Setting up libpython3.12-minimal:armhf (3.12.6-1) ... Setting up libexpat1:armhf (2.6.3-1) ... Setting up python3.12-minimal (3.12.6-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19828 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_armhf.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package libkrb5support0:armhf. Preparing to unpack .../04-libkrb5support0_1.21.3-3_armhf.deb ... Unpacking libkrb5support0:armhf (1.21.3-3) ... Selecting previously unselected package libcom-err2:armhf. Preparing to unpack .../05-libcom-err2_1.47.1-1_armhf.deb ... Unpacking libcom-err2:armhf (1.47.1-1) ... Selecting previously unselected package libk5crypto3:armhf. Preparing to unpack .../06-libk5crypto3_1.21.3-3_armhf.deb ... Unpacking libk5crypto3:armhf (1.21.3-3) ... 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Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3 to /lib/arm-linux-gnueabihf/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0 to /lib/arm-linux-gnueabihf/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:armhf (1.3.4+ds-1.3) ... Selecting previously unselected package libnsl2:armhf. Preparing to unpack .../12-libnsl2_1.3.0-3+b2_armhf.deb ... Unpacking libnsl2:armhf (1.3.0-3+b2) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:armhf. Preparing to unpack .../14-libreadline8t64_8.2-5_armhf.deb ... Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8 to /lib/arm-linux-gnueabihf/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libhistory.so.8.2 to /lib/arm-linux-gnueabihf/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8 to /lib/arm-linux-gnueabihf/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/arm-linux-gnueabihf/libreadline.so.8.2 to /lib/arm-linux-gnueabihf/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:armhf (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:armhf. Preparing to unpack .../15-libpython3.12-stdlib_3.12.6-1_armhf.deb ... Unpacking libpython3.12-stdlib:armhf (3.12.6-1) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.6-1_armhf.deb ... Unpacking python3.12 (3.12.6-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20900 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.6-1_armhf.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sgml-base. Preparing to unpack .../01-sgml-base_1.31_all.deb ... Unpacking sgml-base (1.31) ... Selecting previously unselected package libproc2-0:armhf. Preparing to unpack .../02-libproc2-0_2%3a4.0.4-6_armhf.deb ... Unpacking libproc2-0:armhf (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../03-procps_2%3a4.0.4-6_armhf.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../04-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../05-openssl_3.3.2-1_armhf.deb ... Unpacking openssl (3.3.2-1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../06-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. 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Preparing to unpack .../78-python3-charset-normalizer_3.3.2-4_armhf.deb ... Unpacking python3-charset-normalizer (3.3.2-4) ... Selecting previously unselected package python3-defusedxml. Preparing to unpack .../79-python3-defusedxml_0.7.1-2_all.deb ... Unpacking python3-defusedxml (0.7.1-2) ... Selecting previously unselected package python3-roman. Preparing to unpack .../80-python3-roman_4.2-1_all.deb ... Unpacking python3-roman (4.2-1) ... Selecting previously unselected package python3-docutils. Preparing to unpack .../81-python3-docutils_0.21.2+dfsg-2_all.deb ... Unpacking python3-docutils (0.21.2+dfsg-2) ... Selecting previously unselected package python3-idna. Preparing to unpack .../82-python3-idna_3.8-2_all.deb ... Unpacking python3-idna (3.8-2) ... Selecting previously unselected package python3-imagesize. Preparing to unpack .../83-python3-imagesize_1.4.1-1_all.deb ... Unpacking python3-imagesize (1.4.1-1) ... Selecting previously unselected package python3-markupsafe. 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Selecting previously unselected package python3-snowballstemmer. Preparing to unpack .../90-python3-snowballstemmer_2.2.0-4_all.deb ... Unpacking python3-snowballstemmer (2.2.0-4) ... Selecting previously unselected package sphinx-common. Preparing to unpack .../91-sphinx-common_7.4.7-3_all.deb ... Unpacking sphinx-common (7.4.7-3) ... Selecting previously unselected package python3-sphinx. Preparing to unpack .../92-python3-sphinx_7.4.7-3_all.deb ... Unpacking python3-sphinx (7.4.7-3) ... Selecting previously unselected package zlib1g-dev:armhf. Preparing to unpack .../93-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_armhf.deb ... Unpacking zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:armhf (1.5.8-1) ... Setting up libkeyutils1:armhf (1.6.3-3) ... Setting up libicu72:armhf (72.1-5) ... Setting up bsdextrautils (2.40.2-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libyaml-cpp0.8:armhf (0.8.0+dfsg-6+b1) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:armhf (1.1.0-2+b4) ... Setting up libuv1t64:armhf (1.48.0-6) ... Setting up libmagic1t64:armhf (1:5.45-3) ... Setting up libyaml-cpp-dev:armhf (0.8.0+dfsg-6+b1) ... Setting up libpsl5t64:armhf (0.21.2-1.1) ... Setting up libnghttp2-14:armhf (1.63.0-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:armhf (1.47.1-1) ... Setting up file (1:5.45-3) ... Setting up libturbojpeg0:armhf (1:2.1.5-3) ... Setting up libelf1t64:armhf (0.191-2) ... Setting up python-babel-localedata (2.14.0-1) ... Setting up libkrb5support0:armhf (1.21.3-3) ... Setting up libsasl2-modules-db:armhf (2.1.28+dfsg1-8) ... Setting up tzdata (2024a-4) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Oct 11 01:32:19 UTC 2024. Universal Time is now: Fri Oct 11 01:32:19 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libturbojpeg0-dev:armhf (1:2.1.5-3) ... Setting up autotools-dev (20220109.1) ... Setting up libpkgconf3:armhf (1.8.1-3) ... Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up libjsoncpp26:armhf (1.9.6-2) ... Setting up libproc2-0:armhf (2:4.0.4-6) ... Setting up autopoint (0.22.5-2) ... Setting up pkgconf-bin (1.8.1-3) ... Setting up libk5crypto3:armhf (1.21.3-3) ... Setting up libsasl2-2:armhf (2.1.28+dfsg1-8) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:armhf (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b2) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:armhf (0.0.8-1+b1) ... Setting up procps (2:4.0.4-6) ... Setting up libjson-perl (4.10000-1) ... Setting up libopenjp2-7:armhf (2.5.0-2+b3) ... Setting up netbase (6.4) ... Setting up sgml-base (1.31) ... Setting up cmake-data (3.30.4-1) ... Setting up librhash1:armhf (1.4.4-3) ... Setting up libkrb5-3:armhf (1.21.3-3) ... Setting up libssh2-1t64:armhf (1.11.0-7) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up openssl (3.3.2-1) ... Setting up readline-common (8.2-5) ... Setting up libxml2:armhf (2.12.7+dfsg+really2.9.14-0.1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-7) ... Setting up libldap-2.5-0:armhf (2.5.18+dfsg-3) ... Setting up pkgconf:armhf (1.8.1-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libopenjp2-7-dev:armhf (2.5.0-2+b3) ... Setting up libgssapi-krb5-2:armhf (1.21.3-3) ... Setting up libjs-sphinxdoc (7.4.7-3) ... Setting up libreadline8t64:armhf (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up xml-core (0.19) ... Setting up libarchive13t64:armhf (3.7.4-1) ... Setting up libcurl4t64:armhf (8.10.1-1) ... Setting up libtirpc3t64:armhf (1.3.4+ds-1.3) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up sphinx-common (7.4.7-3) ... Setting up libnsl2:armhf (1.3.0-3+b2) ... Setting up cmake (3.30.4-1+b1) ... Setting up libpython3.12-stdlib:armhf (3.12.6-1) ... Setting up python3.12 (3.12.6-1) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:armhf (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-markupsafe (2.1.5-1+b1) ... Setting up python3-roman (4.2-1) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.1-1) ... Setting up python3-certifi (2024.8.30-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up python3-idna (3.8-2) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-urllib3 (2.0.7-2) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-defusedxml (0.7.1-2) ... Setting up python3-charset-normalizer (3.3.2-4) ... Setting up python3-alabaster (0.7.16-0.1) ... Setting up python3-typeguard (4.3.0-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-pygments (2.18.0+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-requests (2.32.3+dfsg-1) ... Processing triggers for libc-bin (2.40-3) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.21.2+dfsg-2) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.21.2+dfsg-2) ... Setting up python3-sphinx (7.4.7-3) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/24684/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/24684/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/dcm2niix-1.0.20240202/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../dcm2niix_1.0.20240202-1_source.changes dpkg-buildpackage: info: source package dcm2niix dpkg-buildpackage: info: source version 1.0.20240202-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf debian/rules clean dh clean --sourcedirectory=console --buildsystem=cmake debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202' dh_auto_clean rm -f -rf build/man make[1]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202' dh_autoreconf_clean -O--sourcedirectory=console -O--buildsystem=cmake dh_clean -O--sourcedirectory=console -O--buildsystem=cmake debian/rules binary dh binary --sourcedirectory=console --buildsystem=cmake dh_update_autotools_config -O--sourcedirectory=console -O--buildsystem=cmake dh_autoreconf -O--sourcedirectory=console -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202' dh_auto_configure -- -DBATCH_VERSION=ON \ -DUSE_STATIC_RUNTIME=OFF \ -DUSE_SYSTEM_ZLIB=ON \ -DUSE_OPENJPEG=ON \ -DUSE_TURBOJPEG=ON cd obj-arm-linux-gnueabihf && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DBATCH_VERSION=ON -DUSE_STATIC_RUNTIME=OFF -DUSE_SYSTEM_ZLIB=ON -DUSE_OPENJPEG=ON -DUSE_TURBOJPEG=ON ../console CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at ucm.cmake:13 (cmake_minimum_required): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. Call Stack (most recent call first): CMakeLists.txt:6 (include) -- Performing Test ARM_CRC -- Performing Test ARM_CRC - Failed -- Performing Test HAS_SSE2 -- Performing Test HAS_SSE2 - Failed -- Set BUILD_DCM2NIIXFSLIB to OFF since USE_TURBOJPEG/USE_JASPER/USE_OPENJPEG is ON. -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- Checking for module 'libturbojpeg' -- Found libturbojpeg, version 2.1.5 -- The imported target "openjpip" references the file "/usr/lib/arm-linux-gnueabihf/libopenjpip.so.2.5.0" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- The imported target "opj_decompress" references the file "/usr/bin/opj_decompress" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- The imported target "opj_compress" references the file "/usr/bin/opj_compress" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- The imported target "opj_dump" references the file "/usr/bin/opj_dump" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- The imported target "opj_jpip_addxml" references the file "/usr/bin/opj_jpip_addxml" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- The imported target "opj_server" references the file "/usr/bin/opj_server" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- The imported target "opj_dec_server" references the file "/usr/bin/opj_dec_server" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- The imported target "opj_jpip_transcode" references the file "/usr/bin/opj_jpip_transcode" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- The imported target "opj_jpip_test" references the file "/usr/bin/opj_jpip_test" but this file does not exist. Possible reasons include: * The file was deleted, renamed, or moved to another location. * An install or uninstall procedure did not complete successfully. * The installation package was faulty and contained "/usr/lib/arm-linux-gnueabihf/openjpeg-2.5/OpenJPEGTargets.cmake" but not all the files it references. -- Configuring done (2.0s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED USE_SYSTEM_ZLIB -- Build files have been written to: /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf make[1]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202' dh_auto_build cd obj-arm-linux-gnueabihf && make -j4 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/dcm2niix-1.0.20240202/console -B/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf/CMakeFiles /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' make -f CMakeFiles/dcm2niix.dir/build.make CMakeFiles/dcm2niix.dir/depend make -f CMakeFiles/dcm2niibatch.dir/build.make CMakeFiles/dcm2niibatch.dir/depend make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' cd /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dcm2niix-1.0.20240202/console /build/reproducible-path/dcm2niix-1.0.20240202/console /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf/CMakeFiles/dcm2niix.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' cd /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dcm2niix-1.0.20240202/console /build/reproducible-path/dcm2niix-1.0.20240202/console /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf/CMakeFiles/dcm2niibatch.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' make -f CMakeFiles/dcm2niix.dir/build.make CMakeFiles/dcm2niix.dir/build make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' make -f CMakeFiles/dcm2niibatch.dir/build.make CMakeFiles/dcm2niibatch.dir/build make[4]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' [ 4%] Building CXX object CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp [ 9%] Building CXX object CMakeFiles/dcm2niix.dir/main_console.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/main_console.cpp.o -MF CMakeFiles/dcm2niix.dir/main_console.cpp.o.d -o CMakeFiles/dcm2niix.dir/main_console.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/main_console.cpp [ 13%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o [ 18%] Building CXX object CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/main_console_batch.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:186: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:260: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:262: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:267: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp: In function 'unsigned char* decode_JPEG_SOF_0XC3(const char*, int, bool, int*, int*, int*, int*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:135:29: warning: variable 'btS2' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:135:35: warning: variable 'SOSse' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp: In function 'unsigned char* nii_loadImgCoreOpenJPEG(char*, nifti_1_header, TDICOMdata, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp:229:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'long int' [-Wsign-compare] [ 22%] Building CXX object CMakeFiles/dcm2niix.dir/ujpeg.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niix.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niix.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/ujpeg.cpp [ 27%] Building CXX object CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -MF CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o.d -o CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nifti1_io_core.cpp [ 31%] Building CXX object CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_foreign.cpp [ 36%] Building CXX object CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_ortho.cpp [ 40%] Building CXX object CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp [ 45%] Building CXX object CMakeFiles/dcm2niix.dir/cJSON.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/cJSON.cpp.o -MF CMakeFiles/dcm2niix.dir/cJSON.cpp.o.d -o CMakeFiles/dcm2niix.dir/cJSON.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/cJSON.cpp In file included from /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:22: /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:3805: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:3808: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:4684: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'tinfl_status tinfl_decompress(tinfl_decompressor*, const mz_uint8*, size_t*, mz_uint8*, mz_uint8*, size_t*, mz_uint32)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_start_dynamic_block(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1987:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1987:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1989:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1989:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1990:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1990:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1993:55: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1993:55: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1994:46: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1994:46: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1999:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1999:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2000:21: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2000:21: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_start_static_block(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2019:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2019:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'mz_bool tdefl_compress_lz_codes(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2130:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2130:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2131:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2131:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2142:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2142:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2143:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2143:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2149:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2149:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2153:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2153:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'int tdefl_flush_block(tdefl_compressor*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:30: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:30: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2191:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2191:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2203:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2203:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2204:25: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2204:25: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2207:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2207:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2211:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2211:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2225:27: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2225:27: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2226:106: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2226:106: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:25: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:25: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:67: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:67: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:141: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:141: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_find_match(tdefl_compressor*, mz_uint, mz_uint, mz_uint, mz_uint*, mz_uint*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2324:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2324:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void siemensCsaAscii(const char*, TCsaAscii*, int, int, float*, char*, char*, char*, char*, char*, char*, char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:952:36: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void nii_SaveBIDSX(char*, TDICOMdata, TDCMopts, nifti_1_header*, const char*, TDTI4D*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:2233:28: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'bool ensureSequentialSlicePositions(int, int, TDCMsort*, TDICOMdata*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3059:26: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3060:26: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3062:40: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3064:31: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3065:31: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3066:28: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3093:29: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3121:29: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3122:29: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void createDummyBidsBoilerplate(char*, bool)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3342:17: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3344:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_saveMGH(char*, nifti_1_header, unsigned char*, TDCMopts, TDICOMdata, TDTI4D*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4179:23: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void write_ubjsonint(void*, int, int, FILE*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4619:14: warning: the address of 'bool littleEndianPlatform()' will never be NULL [-Waddress] In file included from /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:31: /build/reproducible-path/dcm2niix-1.0.20240202/console/nifti1_io_core.h:59:6: note: 'bool littleEndianPlatform()' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_savejnii(char*, nifti_1_header, unsigned char*, TDCMopts, TDICOMdata, TDTI4D*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4926:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4978:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void removeSclSlopeInter(nifti_1_header*, unsigned char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5115:30: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5116:30: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5136:30: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5137:30: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void sliceTimingXA(TDCMsort*, TDICOMdata*, nifti_1_header*, int, const char*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6238:22: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void sliceTimingGE_Testx0021x105E(TDICOMdata*, TDCMopts, nifti_1_header*, TDCMsort*, TDICOMdata*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6391:22: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6398:25: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void setBidsSiemens(TDICOMdata*, int, int, const char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6440:23: warning: unused variable 'pf' [-Wunused-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void setBidsPhilips(TDICOMdata*, int, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6726:14: warning: variable 'isDirLabel' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void setBidsGE(TDICOMdata*, int, int, const char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6903:13: warning: variable 'nVol' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void sliceTimingGE(TDICOMdata*, const char*, TDCMopts, nifti_1_header*, TDCMsort*, TDICOMdata*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7124:19: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7127:34: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int saveDcm2NiiCore(int, TDCMsort*, TDICOMdata*, TSearchList*, TDCMopts, TDTI4D*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7724:57: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7725:57: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7731:81: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8163:31: warning: unused variable 'shearMat' [-Wunused-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_loadDirCore(char*, TDCMopts*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9256:35: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] [ 50%] Building CXX object CMakeFiles/dcm2niix.dir/base64.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niix.dir/base64.cpp.o -MF CMakeFiles/dcm2niix.dir/base64.cpp.o.d -o CMakeFiles/dcm2niix.dir/base64.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/base64.cpp [ 54%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp: In function 'unsigned char* nii_loadImgCoreOpenJPEG(char*, nifti_1_header, TDICOMdata, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp:229:16: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'unsigned int'} and 'long int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp: In function 'TDICOMdata readDICOMx(char*, TDCMprefs*, TDTI4D*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp:7545:21: warning: 'lLength' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp:4724:18: note: 'lLength' was declared here [ 59%] Building CXX object CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -MF CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:186: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:260: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:262: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:267: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp: In function 'unsigned char* decode_JPEG_SOF_0XC3(const char*, int, bool, int*, int*, int*, int*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:135:29: warning: variable 'btS2' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/jpg_0XC3.cpp:135:35: warning: variable 'SOSse' set but not used [-Wunused-but-set-variable] [ 63%] Building CXX object CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -MF CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/ujpeg.cpp [ 68%] Building CXX object CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nifti1_io_core.cpp [ 72%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_foreign.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp: In function 'TDICOMdata readDICOMx(char*, TDCMprefs*, TDTI4D*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp:7545:21: warning: 'lLength' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom.cpp:4724:18: note: 'lLength' was declared here [ 77%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_ortho.cpp [ 81%] Building CXX object CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -MF CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp In file included from /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:22: /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:3805: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:3808: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:4684: warning: ignoring '#pragma unused ' [-Wunknown-pragmas] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'tinfl_status tinfl_decompress(tinfl_decompressor*, const mz_uint8*, size_t*, mz_uint8*, mz_uint8*, size_t*, mz_uint32)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:9: warning: this 'for' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1506:47: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_start_dynamic_block(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1987:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1987:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1989:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1989:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1990:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1990:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1993:55: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1993:55: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1994:46: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1994:46: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1999:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1999:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2000:21: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2000:21: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_start_static_block(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2019:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2019:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'mz_bool tdefl_compress_lz_codes(tdefl_compressor*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2130:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2130:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2131:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2131:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2142:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2142:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2143:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2143:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2149:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2149:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2153:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2153:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'int tdefl_flush_block(tdefl_compressor*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:30: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2188:30: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2191:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2191:3: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2203:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2203:5: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2204:25: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2204:25: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2207:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2207:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2211:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2211:7: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2225:27: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2225:27: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2226:106: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2226:106: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:25: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:25: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:67: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:67: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1916:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:141: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:1918:7: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2230:141: note: in expansion of macro 'TDEFL_PUT_BITS' /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c: In function 'void tdefl_find_match(tdefl_compressor*, mz_uint, mz_uint, mz_uint, mz_uint*, mz_uint*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2324:5: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/miniz.c:2324:23: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' [ 86%] Building CXX object CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o -MF CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/cJSON.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void siemensCsaAscii(const char*, TCsaAscii*, int, int, float*, char*, char*, char*, char*, char*, char*, char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:952:36: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void nii_SaveBIDSX(char*, TDICOMdata, TDCMopts, nifti_1_header*, const char*, TDTI4D*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:2233:28: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'bool ensureSequentialSlicePositions(int, int, TDCMsort*, TDICOMdata*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3059:26: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3060:26: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3062:40: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3064:31: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3065:31: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3066:28: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3093:29: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3121:29: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3122:29: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void createDummyBidsBoilerplate(char*, bool)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3342:17: warning: this 'if' clause does not guard... [-Wmisleading-indentation] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:3344:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_saveMGH(char*, nifti_1_header, unsigned char*, TDCMopts, TDICOMdata, TDTI4D*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4179:23: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void write_ubjsonint(void*, int, int, FILE*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4619:14: warning: the address of 'bool littleEndianPlatform()' will never be NULL [-Waddress] In file included from /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:31: /build/reproducible-path/dcm2niix-1.0.20240202/console/nifti1_io_core.h:59:6: note: 'bool littleEndianPlatform()' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_savejnii(char*, nifti_1_header, unsigned char*, TDCMopts, TDICOMdata, TDTI4D*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4926:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:4978:22: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void removeSclSlopeInter(nifti_1_header*, unsigned char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5115:30: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5116:30: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5136:30: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:5137:30: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void sliceTimingXA(TDCMsort*, TDICOMdata*, nifti_1_header*, int, const char*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6238:22: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void sliceTimingGE_Testx0021x105E(TDICOMdata*, TDCMopts, nifti_1_header*, TDCMsort*, TDICOMdata*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6391:22: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6398:25: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void setBidsSiemens(TDICOMdata*, int, int, const char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6440:23: warning: unused variable 'pf' [-Wunused-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void setBidsPhilips(TDICOMdata*, int, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6726:14: warning: variable 'isDirLabel' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void setBidsGE(TDICOMdata*, int, int, const char*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:6903:13: warning: variable 'nVol' set but not used [-Wunused-but-set-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'void sliceTimingGE(TDICOMdata*, const char*, TDCMopts, nifti_1_header*, TDCMsort*, TDICOMdata*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7124:19: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7127:34: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int saveDcm2NiiCore(int, TDCMsort*, TDICOMdata*, TSearchList*, TDCMopts, TDTI4D*, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:105:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7724:57: note: in expansion of macro 'min' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7725:57: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:98:9: warning: ISO C++ forbids braced-groups within expressions [-Wpedantic] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:7731:81: note: in expansion of macro 'max' /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8163:31: warning: unused variable 'shearMat' [-Wunused-variable] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_loadDirCore(char*, TDCMopts*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9256:35: warning: comparison of integer expressions of different signedness: 'int' and 'long unsigned int' [-Wsign-compare] [ 90%] Building CXX object CMakeFiles/dcm2niibatch.dir/base64.cpp.o /usr/bin/c++ -DmyEnableJNIFTI -DmyTurboJPEG -isystem /usr/include/openjpeg-2.5 -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-format-overflow -Wno-unused-result -fno-diagnostics-show-caret -MD -MT CMakeFiles/dcm2niibatch.dir/base64.cpp.o -MF CMakeFiles/dcm2niibatch.dir/base64.cpp.o.d -o CMakeFiles/dcm2niibatch.dir/base64.cpp.o -c /build/reproducible-path/dcm2niix-1.0.20240202/console/base64.cpp /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int searchDirForDICOM(char*, TSearchList*, int, int, TDCMopts*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8834:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8832:21: note: 'dir' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8834:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8832:21: note: 'dir' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_loadDirOneDirAtATime(char*, TDCMopts*, int, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9548:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9546:21: note: 'dir' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9548:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9546:21: note: 'dir' declared here [ 95%] Linking CXX executable dcm2niix /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2niix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dcm2niix.dir/main_console.cpp.o CMakeFiles/dcm2niix.dir/nii_dicom.cpp.o CMakeFiles/dcm2niix.dir/jpg_0XC3.cpp.o CMakeFiles/dcm2niix.dir/ujpeg.cpp.o CMakeFiles/dcm2niix.dir/nifti1_io_core.cpp.o CMakeFiles/dcm2niix.dir/nii_foreign.cpp.o CMakeFiles/dcm2niix.dir/nii_ortho.cpp.o CMakeFiles/dcm2niix.dir/nii_dicom_batch.cpp.o CMakeFiles/dcm2niix.dir/cJSON.cpp.o CMakeFiles/dcm2niix.dir/base64.cpp.o -o dcm2niix -lturbojpeg /usr/lib/arm-linux-gnueabihf/libopenjp2.so.2.5.0 -lm make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' [ 95%] Built target dcm2niix /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int searchDirForDICOM(char*, TSearchList*, int, int, TDCMopts*)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8834:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8832:21: note: 'dir' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8834:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:8832:21: note: 'dir' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp: In function 'int nii_loadDirOneDirAtATime(char*, TDCMopts*, int, int)': /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9548:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9546:21: note: 'dir' declared here /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9548:20: warning: 'dir.tinydir_dir::has_next' may be used uninitialized [-Wmaybe-uninitialized] /build/reproducible-path/dcm2niix-1.0.20240202/console/nii_dicom_batch.cpp:9546:21: note: 'dir' declared here [100%] Linking CXX executable dcm2niibatch /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2niibatch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dcm2niix-1.0.20240202=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -Wall -pedantic -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/dcm2niibatch.dir/main_console_batch.cpp.o CMakeFiles/dcm2niibatch.dir/nii_dicom.cpp.o CMakeFiles/dcm2niibatch.dir/jpg_0XC3.cpp.o CMakeFiles/dcm2niibatch.dir/ujpeg.cpp.o CMakeFiles/dcm2niibatch.dir/nifti1_io_core.cpp.o CMakeFiles/dcm2niibatch.dir/nii_foreign.cpp.o CMakeFiles/dcm2niibatch.dir/nii_ortho.cpp.o CMakeFiles/dcm2niibatch.dir/nii_dicom_batch.cpp.o CMakeFiles/dcm2niibatch.dir/cJSON.cpp.o CMakeFiles/dcm2niibatch.dir/base64.cpp.o -o dcm2niibatch -lyaml-cpp -lturbojpeg /usr/lib/arm-linux-gnueabihf/libopenjp2.so.2.5.0 -lm make[4]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' [100%] Built target dcm2niibatch make[3]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' sphinx-build -N -b man docs/source build/man Running Sphinx v7.4.7 WARNING: Invalid configuration value found: 'language = None'. Update your configuration to a valid language code. Falling back to 'en' (English). loading translations [en]... done making output directory... done WARNING: html_static_path entry '_static' does not exist Converting `source_suffix = '.rst'` to `source_suffix = {'.rst': 'restructuredtext'}`. building [mo]: targets for 0 po files that are out of date writing output... building [man]: all manpages updating environment: [new config] 3 added, 0 changed, 0 removed reading sources... [ 33%] dcm2niibatch reading sources... [ 67%] dcm2niix reading sources... [100%] index looking for now-outdated files... none found pickling environment... done checking consistency... done writing... dcm2niix.1 { } dcm2niibatch.1 { } done build succeeded, 2 warnings. The manual pages are in build/man. make[1]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202' dh_auto_test -O--sourcedirectory=console -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp dh_testroot -O--sourcedirectory=console -O--buildsystem=cmake dh_prep -O--sourcedirectory=console -O--buildsystem=cmake dh_auto_install --destdir=debian/dcm2niix/ -O--sourcedirectory=console -O--buildsystem=cmake cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/build/reproducible-path/dcm2niix-1.0.20240202/debian/dcm2niix AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' /usr/bin/cmake -S/build/reproducible-path/dcm2niix-1.0.20240202/console -B/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/dcm2niix-1.0.20240202/debian/dcm2niix/usr/bin/dcm2niix -- Installing: /build/reproducible-path/dcm2niix-1.0.20240202/debian/dcm2niix/usr/bin/dcm2niibatch make[1]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202/obj-arm-linux-gnueabihf' dh_installdocs -O--sourcedirectory=console -O--buildsystem=cmake debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/dcm2niix-1.0.20240202' dh_installchangelogs VERSIONS.md make[1]: Leaving directory '/build/reproducible-path/dcm2niix-1.0.20240202' dh_installman -O--sourcedirectory=console -O--buildsystem=cmake dh_installsystemduser -O--sourcedirectory=console -O--buildsystem=cmake dh_perl -O--sourcedirectory=console -O--buildsystem=cmake dh_link -O--sourcedirectory=console -O--buildsystem=cmake dh_strip_nondeterminism -O--sourcedirectory=console -O--buildsystem=cmake dh_compress -O--sourcedirectory=console -O--buildsystem=cmake dh_fixperms -O--sourcedirectory=console -O--buildsystem=cmake dh_missing -O--sourcedirectory=console -O--buildsystem=cmake dh_dwz -a -O--sourcedirectory=console -O--buildsystem=cmake dh_strip -a -O--sourcedirectory=console -O--buildsystem=cmake dh_makeshlibs -a -O--sourcedirectory=console -O--buildsystem=cmake dh_shlibdeps -a -O--sourcedirectory=console -O--buildsystem=cmake dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-armhf.so.3 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-armhf.so.3.usr-is-merged dh_installdeb -O--sourcedirectory=console -O--buildsystem=cmake dh_gencontrol -O--sourcedirectory=console -O--buildsystem=cmake dh_md5sums -O--sourcedirectory=console -O--buildsystem=cmake dh_builddeb -O--sourcedirectory=console -O--buildsystem=cmake dpkg-deb: building package 'dcm2niix' in '../dcm2niix_1.0.20240202-1_armhf.deb'. dpkg-deb: building package 'dcm2niix-dbgsym' in '../dcm2niix-dbgsym_1.0.20240202-1_armhf.deb'. dpkg-genbuildinfo --build=binary -O../dcm2niix_1.0.20240202-1_armhf.buildinfo dpkg-genchanges --build=binary -O../dcm2niix_1.0.20240202-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/24684/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/24684/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/24684 and its subdirectories I: Current time: Fri Oct 11 15:34:05 +14 2024 I: pbuilder-time-stamp: 1728610445