I: pbuilder: network access will be disabled during build I: Current time: Tue Jun 17 07:04:13 +14 2025 I: pbuilder-time-stamp: 1750093453 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-biom-format_2.1.15.2-3.dsc] I: copying [./python-biom-format_2.1.15.2.orig.tar.gz] I: copying [./python-biom-format_2.1.15.2-3.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Feb 4 19:23:04 2024 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-biom-format_2.1.15.2-3.dsc: no acceptable signature found dpkg-source: info: extracting python-biom-format in python-biom-format-2.1.15.2 dpkg-source: info: unpacking python-biom-format_2.1.15.2.orig.tar.gz dpkg-source: info: unpacking python-biom-format_2.1.15.2-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying ignore_local_dist-packages.patch dpkg-source: info: applying no-web-adds.patch dpkg-source: info: applying fix_future_import.patch dpkg-source: info: applying sphinx_1.6.patch dpkg-source: info: applying posix_shell.patch dpkg-source: info: applying adjust-pd-df-interaction-with-greater-than.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/254940/tmp/hooks/D01_modify_environment starting debug: Running on codethink03-arm64. I: Changing host+domainname to test build reproducibility I: Adding a custom variable just for the fun of it... I: Changing /bin/sh to bash '/bin/sh' -> '/bin/bash' lrwxrwxrwx 1 root root 9 Jun 16 17:04 /bin/sh -> /bin/bash I: Setting pbuilder2's login shell to /bin/bash I: Setting pbuilder2's GECOS to second user,second room,second work-phone,second home-phone,second other I: user script /srv/workspace/pbuilder/254940/tmp/hooks/D01_modify_environment finished I: user script /srv/workspace/pbuilder/254940/tmp/hooks/D02_print_environment starting I: set BASH=/bin/sh BASHOPTS=checkwinsize:cmdhist:complete_fullquote:extquote:force_fignore:globasciiranges:globskipdots:hostcomplete:interactive_comments:patsub_replacement:progcomp:promptvars:sourcepath BASH_ALIASES=() BASH_ARGC=() BASH_ARGV=() BASH_CMDS=() BASH_LINENO=([0]="12" [1]="0") BASH_LOADABLES_PATH=/usr/local/lib/bash:/usr/lib/bash:/opt/local/lib/bash:/usr/pkg/lib/bash:/opt/pkg/lib/bash:. BASH_SOURCE=([0]="/tmp/hooks/D02_print_environment" [1]="/tmp/hooks/D02_print_environment") BASH_VERSINFO=([0]="5" [1]="2" [2]="21" [3]="1" [4]="release" [5]="aarch64-unknown-linux-gnu") BASH_VERSION='5.2.21(1)-release' BUILDDIR=/build/reproducible-path BUILDUSERGECOS='second user,second room,second work-phone,second home-phone,second other' BUILDUSERNAME=pbuilder2 BUILD_ARCH=arm64 DEBIAN_FRONTEND=noninteractive DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DIRSTACK=() DISTRIBUTION=trixie EUID=0 FUNCNAME=([0]="Echo" [1]="main") GROUPS=() HOME=/root HOSTNAME=i-capture-the-hostname HOSTTYPE=aarch64 HOST_ARCH=arm64 IFS=' ' INVOCATION_ID=6ae0e53cae7d46dfbab0c3d5768974fc LANG=C LANGUAGE=nl_BE:nl LC_ALL=C MACHTYPE=aarch64-unknown-linux-gnu MAIL=/var/mail/root OPTERR=1 OPTIND=1 OSTYPE=linux-gnu PATH=/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path PBCURRENTCOMMANDLINEOPERATION=build PBUILDER_OPERATION=build PBUILDER_PKGDATADIR=/usr/share/pbuilder PBUILDER_PKGLIBDIR=/usr/lib/pbuilder PBUILDER_SYSCONFDIR=/etc PIPESTATUS=([0]="0") POSIXLY_CORRECT=y PPID=254940 PS4='+ ' PWD=/ SHELL=/bin/bash SHELLOPTS=braceexpand:errexit:hashall:interactive-comments:posix SHLVL=3 SUDO_COMMAND='/usr/bin/timeout -k 24.1h 24h /usr/bin/ionice -c 3 /usr/bin/nice -n 11 /usr/bin/unshare --uts -- /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.NwrOP8aB/pbuilderrc_mHH7 --distribution trixie --hookdir /etc/pbuilder/rebuild-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.NwrOP8aB/b2 --logfile b2/build.log python-biom-format_2.1.15.2-3.dsc' SUDO_GID=109 SUDO_UID=104 SUDO_USER=jenkins TERM=unknown TZ=/usr/share/zoneinfo/Etc/GMT-14 UID=0 USER=root _='I: set' http_proxy=http://192.168.101.4:3128 I: uname -a Linux i-capture-the-hostname 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 15 17:48 /bin -> usr/bin I: user script /srv/workspace/pbuilder/254940/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, help2man, bash-completion, cython3, python3-all-dev, python3-click, python3-h5py, python3-numpy, python3-numpydoc, python3-pandas, python3-setuptools, python3-scipy, python3-sphinx, python3-matplotlib, python3-pytest, python3-pytest-cov dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19744 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on bash-completion; however: Package bash-completion is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-click; however: Package python3-click is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-numpydoc; however: Package python3-numpydoc is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-scipy; however: Package python3-scipy is not installed. pbuilder-satisfydepends-dummy depends on python3-sphinx; however: Package python3-sphinx is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest-cov; however: Package python3-pytest-cov is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bash-completion{a} blt{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} docutils-common{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libbsd0{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libdeflate0{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libgssapi-krb5-2{a} libharfbuzz0b{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-hotkeys{a} libjs-jquery-isonscreen{a} libjs-jquery-metadata{a} libjs-jquery-tablesorter{a} libjs-jquery-throttle-debounce{a} libjs-jquery-ui{a} libjs-sphinxdoc{a} libjs-underscore{a} libjson-perl{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} liblocale-gettext-perl{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libopenjp2-7{a} libpipeline1{a} libpng16-16t64{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libqhull-r8.0{a} libraqm0{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libssh2-1t64{a} libsub-override-perl{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxrender1{a} libxslt1.1{a} libxss1{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} python-babel-localedata{a} python-matplotlib-data{a} python3{a} python3-alabaster{a} python3-all{a} python3-all-dev{a} python3-appdirs{a} python3-attr{a} python3-babel{a} python3-brotli{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-click{a} python3-colorama{a} python3-contourpy{a} python3-coverage{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-docutils{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-serial{a} python3-idna{a} python3-imagesize{a} python3-iniconfig{a} python3-jinja2{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-markupsafe{a} python3-matplotlib{a} python3-minimal{a} python3-mpmath{a} python3-numpy{a} python3-numpydoc{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pluggy{a} python3-pygments{a} python3-pyparsing{a} python3-pytest{a} python3-pytest-cov{a} python3-requests{a} python3-roman{a} python3-scipy{a} python3-setuptools{a} python3-six{a} python3-snowballstemmer{a} python3-sphinx{a} python3-sympy{a} python3-tabulate{a} python3-tk{a} python3-tz{a} python3-ufolib2{a} python3-urllib3{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sphinx-common{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl isympy-common javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libjson-xs-perl libldap-common libltdl-dev libmail-sendmail-perl libpaper-utils libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-cssselect python3-html5lib python3-numexpr python3-odf python3-olefile python3-openpyxl python3-tables shared-mime-info wget xdg-user-dirs 0 packages upgraded, 207 newly installed, 0 to remove and 0 not upgraded. Need to get 141 MB of archives. After unpacking 666 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-hotkeys all 0~20130707+git2d51e3a9+dfsg-2.1 [11.5 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 liblocale-gettext-perl arm64 1.07-7 [14.8 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libpython3.11-minimal arm64 3.11.9-1 [813 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.2-1 [88.7 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 python3.11-minimal arm64 3.11.9-1 [1767 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 python3-minimal arm64 3.11.8-1 [26.3 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 media-types all 10.1.0 [26.9 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 netbase all 6.4 [12.8 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 tzdata all 2024a-4 [255 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 readline-common all 8.2-4 [69.3 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 libreadline8t64 arm64 8.2-4 [157 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 libpython3.11-stdlib arm64 3.11.9-1 [1775 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 python3.11 arm64 3.11.9-1 [602 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 libpython3-stdlib arm64 3.11.8-1 [9332 B] Get: 16 http://deb.debian.org/debian trixie/main arm64 python3 arm64 3.11.8-1 [27.4 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libpython3.12-minimal arm64 3.12.3-1 [802 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 python3.12-minimal arm64 3.12.3-1 [1931 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 sgml-base all 1.31 [15.4 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 bash-completion all 1:2.13.0-1 [302 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 openssl arm64 3.2.1-3 [1324 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 ca-certificates all 20240203 [158 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-4 [1130 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40-8 [93.0 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.12.1-1 [1394 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.71-3 [332 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.21-14 [496 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 libtcl8.6 arm64 8.6.14+dfsg-1 [975 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 libbrotli1 arm64 1.1.0-2+b3 [295 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 libpng16-16t64 arm64 1.6.43-5 [272 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 libfreetype6 arm64 2.13.2+dfsg-1+b4 [408 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 44 http://deb.debian.org/debian trixie/main arm64 fontconfig-config arm64 2.15.0-1.1 [317 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 libfontconfig1 arm64 2.15.0-1.1 [385 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 libxau6 arm64 1:1.0.9-1+b1 [18.1 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 libbsd0 arm64 0.12.2-1 [129 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 libxdmcp6 arm64 1:1.1.2-3+b1 [24.3 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 libxcb1 arm64 1.15-1 [143 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 libx11-data all 2:1.8.7-1 [328 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 libx11-6 arm64 2:1.8.7-1+b1 [775 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 libxrender1 arm64 1:0.9.10-1.1+b1 [27.0 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 libxft2 arm64 2.3.6-1+b1 [51.0 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 libxext6 arm64 2:1.3.4-1+b1 [51.7 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 x11-common all 1:7.7+23 [252 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 libxss1 arm64 1:1.2.3-1+b1 [17.0 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 libtk8.6 arm64 8.6.14-1 [732 kB] Get: 58 http://deb.debian.org/debian trixie/main arm64 tk8.6-blt2.5 arm64 2.5.3+dfsg-7 [533 kB] Get: 59 http://deb.debian.org/debian trixie/main arm64 blt arm64 2.5.3+dfsg-7 [6024 B] Get: 60 http://deb.debian.org/debian trixie/main arm64 cython3 arm64 3.0.10+dfsg-5 [3120 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 63 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 64 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 68 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 69 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 70 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 71 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b3 [624 kB] Get: 72 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 73 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 74 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 75 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.15.3 [901 kB] Get: 76 http://deb.debian.org/debian trixie/main arm64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 77 http://deb.debian.org/debian trixie/main arm64 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 78 http://deb.debian.org/debian trixie/main arm64 python3-distutils all 3.12.3-1 [131 kB] Get: 79 http://deb.debian.org/debian trixie/main arm64 python3-setuptools all 68.1.2-2 [468 kB] Get: 80 http://deb.debian.org/debian trixie/main arm64 dh-python all 6.20240422 [107 kB] Get: 81 http://deb.debian.org/debian trixie/main arm64 xml-core all 0.19 [20.1 kB] Get: 82 http://deb.debian.org/debian trixie/main arm64 docutils-common all 0.20.1+dfsg-3 [128 kB] Get: 83 http://deb.debian.org/debian trixie/main arm64 fonts-lyx all 2.4.0~RC4-1 [189 kB] Get: 84 http://deb.debian.org/debian trixie/main arm64 help2man arm64 1.49.3 [198 kB] Get: 85 http://deb.debian.org/debian trixie/main arm64 libaec0 arm64 1.1.3-1 [22.1 kB] Get: 86 http://deb.debian.org/debian trixie/main arm64 libblas3 arm64 3.12.0-3 [91.7 kB] Get: 87 http://deb.debian.org/debian trixie/main arm64 libcom-err2 arm64 1.47.1~rc2-1 [22.5 kB] Get: 88 http://deb.debian.org/debian trixie/main arm64 libkrb5support0 arm64 1.20.1-6+b1 [33.0 kB] Get: 89 http://deb.debian.org/debian trixie/main arm64 libk5crypto3 arm64 1.20.1-6+b1 [80.5 kB] Get: 90 http://deb.debian.org/debian trixie/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get: 91 http://deb.debian.org/debian trixie/main arm64 libkrb5-3 arm64 1.20.1-6+b1 [315 kB] Get: 92 http://deb.debian.org/debian trixie/main arm64 libgssapi-krb5-2 arm64 1.20.1-6+b1 [124 kB] Get: 93 http://deb.debian.org/debian trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-6 [20.1 kB] Get: 94 http://deb.debian.org/debian trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-6 [55.3 kB] Get: 95 http://deb.debian.org/debian trixie/main arm64 libldap-2.5-0 arm64 2.5.17+dfsg-1 [173 kB] Get: 96 http://deb.debian.org/debian trixie/main arm64 libnghttp2-14 arm64 1.61.0-1+b1 [71.0 kB] Get: 97 http://deb.debian.org/debian trixie/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get: 98 http://deb.debian.org/debian trixie/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get: 99 http://deb.debian.org/debian trixie/main arm64 libssh2-1t64 arm64 1.11.0-4.1+b2 [207 kB] Get: 100 http://deb.debian.org/debian trixie/main arm64 libcurl4t64 arm64 8.7.1-5 [412 kB] Get: 101 http://deb.debian.org/debian trixie/main arm64 libdeflate0 arm64 1.20-1 [41.5 kB] Get: 102 http://deb.debian.org/debian trixie/main arm64 libexpat1-dev arm64 2.6.2-1 [278 kB] Get: 103 http://deb.debian.org/debian trixie/main arm64 libfribidi0 arm64 1.0.13-3+b1 [71.3 kB] Get: 104 http://deb.debian.org/debian trixie/main arm64 libgfortran5 arm64 14-20240330-1 [361 kB] Get: 105 http://deb.debian.org/debian trixie/main arm64 libglib2.0-0t64 arm64 2.80.2-1 [1393 kB] Get: 106 http://deb.debian.org/debian trixie/main arm64 libgraphite2-3 arm64 1.3.14-2 [69.2 kB] Get: 107 http://deb.debian.org/debian trixie/main arm64 libharfbuzz0b arm64 8.3.0-2+b1 [2178 kB] Get: 108 http://deb.debian.org/debian trixie/main arm64 libsz2 arm64 1.1.3-1 [7664 B] Get: 109 http://deb.debian.org/debian trixie/main arm64 libhdf5-103-1t64 arm64 1.10.10+repack-3.3 [1035 kB] Get: 110 http://deb.debian.org/debian trixie/main arm64 libhdf5-hl-100t64 arm64 1.10.10+repack-3.3 [60.1 kB] Get: 111 http://deb.debian.org/debian trixie/main arm64 libimagequant0 arm64 2.18.0-1+b1 [34.6 kB] Get: 112 http://deb.debian.org/debian trixie/main arm64 libjbig0 arm64 2.1-6.1+b1 [30.4 kB] Get: 113 http://deb.debian.org/debian trixie/main arm64 libjpeg62-turbo arm64 1:2.1.5-3 [172 kB] Get: 114 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-isonscreen all 1.2.0-1.1 [3196 B] Get: 115 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-metadata all 12-4 [6532 B] Get: 116 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-tablesorter all 1:2.31.3+dfsg1-3 [184 kB] Get: 117 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-throttle-debounce all 1.1+dfsg.1-2 [12.2 kB] Get: 118 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 119 http://deb.debian.org/debian trixie/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 120 http://deb.debian.org/debian trixie/main arm64 libjs-sphinxdoc all 7.2.6-6 [150 kB] Get: 121 http://deb.debian.org/debian trixie/main arm64 libjson-perl all 4.10000-1 [87.5 kB] Get: 122 http://deb.debian.org/debian trixie/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB] Get: 123 http://deb.debian.org/debian trixie/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1+b1 [25.0 kB] Get: 124 http://deb.debian.org/debian trixie/main arm64 liblcms2-2 arm64 2.14-2+b1 [144 kB] Get: 125 http://deb.debian.org/debian trixie/main arm64 liblerc4 arm64 4.0.0+ds-4+b1 [142 kB] Get: 126 http://deb.debian.org/debian trixie/main arm64 liblzf1 arm64 3.6-4+b1 [10.3 kB] Get: 127 http://deb.debian.org/debian trixie/main arm64 libopenjp2-7 arm64 2.5.0-2+b3 [177 kB] Get: 128 http://deb.debian.org/debian trixie/main arm64 libpython3.11t64 arm64 3.11.9-1 [1814 kB] Get: 129 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1 [915 kB] Get: 130 http://deb.debian.org/debian trixie/main arm64 libpython3.11-dev arm64 3.11.9-1 [4358 kB] Get: 131 http://deb.debian.org/debian trixie/main arm64 libpython3-dev arm64 3.11.8-1 [9564 B] Get: 132 http://deb.debian.org/debian trixie/main arm64 libpython3.12-stdlib arm64 3.12.3-1 [1889 kB] Get: 133 http://deb.debian.org/debian trixie/main arm64 libpython3.12t64 arm64 3.12.3-1 [1948 kB] Get: 134 http://deb.debian.org/debian trixie/main arm64 libpython3.12-dev arm64 3.12.3-1 [4745 kB] Get: 135 http://deb.debian.org/debian trixie/main arm64 libpython3-all-dev arm64 3.11.8-1 [1072 B] Get: 136 http://deb.debian.org/debian trixie/main arm64 libqhull-r8.0 arm64 2020.2-6+b1 [226 kB] Get: 137 http://deb.debian.org/debian trixie/main arm64 libraqm0 arm64 0.10.1-1+b1 [13.7 kB] Get: 138 http://deb.debian.org/debian trixie/main arm64 libsharpyuv0 arm64 1.4.0-0.1 [111 kB] Get: 139 http://deb.debian.org/debian trixie/main arm64 libwebp7 arm64 1.4.0-0.1 [267 kB] Get: 140 http://deb.debian.org/debian trixie/main arm64 libtiff6 arm64 4.5.1+git230720-4 [307 kB] Get: 141 http://deb.debian.org/debian trixie/main arm64 libwebpdemux2 arm64 1.4.0-0.1 [110 kB] Get: 142 http://deb.debian.org/debian trixie/main arm64 libwebpmux3 arm64 1.4.0-0.1 [122 kB] Get: 143 http://deb.debian.org/debian trixie/main arm64 libxslt1.1 arm64 1.1.35-1+b1 [221 kB] Get: 144 http://deb.debian.org/debian trixie/main arm64 python-babel-localedata all 2.14.0-1 [5701 kB] Get: 145 http://deb.debian.org/debian trixie/main arm64 python-matplotlib-data all 3.6.3-2 [2744 kB] Get: 146 http://deb.debian.org/debian trixie/main arm64 python3-alabaster all 0.7.12-1 [20.8 kB] Get: 147 http://deb.debian.org/debian trixie/main arm64 python3.12 arm64 3.12.3-1 [659 kB] Get: 148 http://deb.debian.org/debian trixie/main arm64 python3-all arm64 3.11.8-1 [1056 B] Get: 149 http://deb.debian.org/debian trixie/main arm64 python3.11-dev arm64 3.11.9-1 [501 kB] Get: 150 http://deb.debian.org/debian trixie/main arm64 python3-dev arm64 3.11.8-1 [26.1 kB] Get: 151 http://deb.debian.org/debian trixie/main arm64 python3.12-dev arm64 3.12.3-1 [499 kB] Get: 152 http://deb.debian.org/debian trixie/main arm64 python3-all-dev arm64 3.11.8-1 [1072 B] Get: 153 http://deb.debian.org/debian trixie/main arm64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 154 http://deb.debian.org/debian trixie/main arm64 python3-attr all 23.2.0-2 [65.5 kB] Get: 155 http://deb.debian.org/debian trixie/main arm64 python3-tz all 2024.1-2 [30.9 kB] Get: 156 http://deb.debian.org/debian trixie/main arm64 python3-babel all 2.14.0-1 [111 kB] Get: 157 http://deb.debian.org/debian trixie/main arm64 python3-brotli arm64 1.1.0-2+b3 [316 kB] Get: 158 http://deb.debian.org/debian trixie/main arm64 python3-certifi all 2023.11.17-1 [155 kB] Get: 159 http://deb.debian.org/debian trixie/main arm64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 160 http://deb.debian.org/debian trixie/main arm64 python3-charset-normalizer all 3.3.2-1 [51.6 kB] Get: 161 http://deb.debian.org/debian trixie/main arm64 python3-colorama all 0.4.6-4 [36.2 kB] Get: 162 http://deb.debian.org/debian trixie/main arm64 python3-click all 8.1.7-1 [94.0 kB] Get: 163 http://deb.debian.org/debian trixie/main arm64 python3-numpy arm64 1:1.26.4+ds-8 [4219 kB] Get: 164 http://deb.debian.org/debian trixie/main arm64 python3-contourpy arm64 1.0.7-3 [247 kB] Get: 165 http://deb.debian.org/debian trixie/main arm64 python3-coverage arm64 7.2.7+dfsg1-1+b1 [170 kB] Get: 166 http://deb.debian.org/debian trixie/main arm64 python3-cycler all 0.12.1-1 [9496 B] Get: 167 http://deb.debian.org/debian trixie/main arm64 python3-six all 1.16.0-6 [16.3 kB] Get: 168 http://deb.debian.org/debian trixie/main arm64 python3-dateutil all 2.9.0-2 [79.4 kB] Get: 169 http://deb.debian.org/debian trixie/main arm64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 170 http://deb.debian.org/debian trixie/main arm64 python3-roman all 3.3-3 [9880 B] Get: 171 http://deb.debian.org/debian trixie/main arm64 python3-docutils all 0.20.1+dfsg-3 [389 kB] Get: 172 http://deb.debian.org/debian trixie/main arm64 python3-scipy arm64 1.11.4-6 [17.5 MB] Get: 173 http://deb.debian.org/debian trixie/main arm64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 174 http://deb.debian.org/debian trixie/main arm64 python3-mpmath all 1.3.0-1 [419 kB] Get: 175 http://deb.debian.org/debian trixie/main arm64 python3-sympy all 1.12-7 [3869 kB] Get: 176 http://deb.debian.org/debian trixie/main arm64 python3-fs all 2.4.16-4 [95.4 kB] Get: 177 http://deb.debian.org/debian trixie/main arm64 python3-lxml arm64 5.1.0-1 [1810 kB] Get: 178 http://deb.debian.org/debian trixie/main arm64 python3-lz4 arm64 4.0.2+dfsg-1+b3 [26.6 kB] Get: 179 http://deb.debian.org/debian trixie/main arm64 unicode-data all 15.1.0-1 [8547 kB] Get: 180 http://deb.debian.org/debian trixie/main arm64 python3-fonttools arm64 4.46.0-1 [1510 kB] Get: 181 http://deb.debian.org/debian trixie/main arm64 python3-h5py-serial arm64 3.10.0-1+b3 [1247 kB] Get: 182 http://deb.debian.org/debian trixie/main arm64 python3-h5py all 3.10.0-1 [14.4 kB] Get: 183 http://deb.debian.org/debian trixie/main arm64 python3-idna all 3.6-2 [37.0 kB] Get: 184 http://deb.debian.org/debian trixie/main arm64 python3-imagesize all 1.4.1-1 [6688 B] Get: 185 http://deb.debian.org/debian trixie/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 186 http://deb.debian.org/debian trixie/main arm64 python3-markupsafe arm64 2.1.5-1 [14.6 kB] Get: 187 http://deb.debian.org/debian trixie/main arm64 python3-jinja2 all 3.1.3-1 [119 kB] Get: 188 http://deb.debian.org/debian trixie/main arm64 python3-kiwisolver arm64 1.4.5-1 [75.0 kB] Get: 189 http://deb.debian.org/debian trixie/main arm64 python3-pil arm64 10.3.0-2 [552 kB] Get: 190 http://deb.debian.org/debian trixie/main arm64 python3-tk arm64 3.12.3-1 [110 kB] Get: 191 http://deb.debian.org/debian trixie/main arm64 python3-pil.imagetk arm64 10.3.0-2 [80.0 kB] Get: 192 http://deb.debian.org/debian trixie/main arm64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 193 http://deb.debian.org/debian trixie/main arm64 python3-packaging all 24.0-1 [45.5 kB] Get: 194 http://deb.debian.org/debian trixie/main arm64 python3-matplotlib arm64 3.6.3-2 [7978 kB] Get: 195 http://deb.debian.org/debian trixie/main arm64 sphinx-common all 7.2.6-6 [702 kB] Get: 196 http://deb.debian.org/debian trixie/main arm64 python3-pygments all 2.17.2+dfsg-1 [818 kB] Get: 197 http://deb.debian.org/debian trixie/main arm64 python3-urllib3 all 1.26.18-2 [116 kB] Get: 198 http://deb.debian.org/debian trixie/main arm64 python3-requests all 2.31.0+dfsg-1 [68.6 kB] Get: 199 http://deb.debian.org/debian trixie/main arm64 python3-snowballstemmer all 2.2.0-4 [58.0 kB] Get: 200 http://deb.debian.org/debian trixie/main arm64 python3-sphinx all 7.2.6-6 [552 kB] Get: 201 http://deb.debian.org/debian trixie/main arm64 python3-tabulate all 0.8.10-1 [38.8 kB] Get: 202 http://deb.debian.org/debian trixie/main arm64 python3-numpydoc all 1.6.0-2 [49.6 kB] Get: 203 http://deb.debian.org/debian trixie/main arm64 python3-pandas-lib arm64 2.1.4+dfsg-8 [6609 kB] Get: 204 http://deb.debian.org/debian trixie/main arm64 python3-pandas all 2.1.4+dfsg-8 [3015 kB] Get: 205 http://deb.debian.org/debian trixie/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 206 http://deb.debian.org/debian trixie/main arm64 python3-pytest all 7.4.4-3 [239 kB] Get: 207 http://deb.debian.org/debian trixie/main arm64 python3-pytest-cov all 5.0.0-1 [26.8 kB] Fetched 141 MB in 1s (192 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libjs-jquery. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19744 files and directories currently installed.) Preparing to unpack .../0-libjs-jquery_3.6.1+dfsg+~3.5.14-1_all.deb ... Unpacking libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Selecting previously unselected package libjs-jquery-hotkeys. Preparing to unpack .../1-libjs-jquery-hotkeys_0~20130707+git2d51e3a9+dfsg-2.1_all.deb ... Unpacking libjs-jquery-hotkeys (0~20130707+git2d51e3a9+dfsg-2.1) ... Selecting previously unselected package liblocale-gettext-perl. Preparing to unpack .../2-liblocale-gettext-perl_1.07-7_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-7) ... Selecting previously unselected package libpython3.11-minimal:arm64. Preparing to unpack .../3-libpython3.11-minimal_3.11.9-1_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.9-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../4-libexpat1_2.6.2-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../5-python3.11-minimal_3.11.9-1_arm64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:arm64 (3.11.9-1) ... Setting up libexpat1:arm64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20100 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_arm64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-4_all.deb ... Unpacking tzdata (2024a-4) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../5-libreadline8t64_8.2-4_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:arm64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_arm64.deb ... Unpacking libpython3.11-stdlib:arm64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_arm64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21092 files and directories currently installed.) Preparing to unpack .../000-python3_3.11.8-1_arm64.deb ... Unpacking python3 (3.11.8-1) ... 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Setting up libblas3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.6.2-1) ... Setting up libjpeg62-turbo:arm64 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up bash-completion (1:2.13.0-1) ... Setting up liblzf1:arm64 (3.6-4+b1) ... Setting up libfribidi0:arm64 (1.0.13-3+b1) ... Setting up libimagequant0:arm64 (2.18.0-1+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:arm64 (1.6.43-5) ... Setting up libtcl8.6:arm64 (8.6.14+dfsg-1) ... Setting up autopoint (0.21-14) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libk5crypto3:arm64 (1.20.1-6+b1) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-6) ... Setting up libgfortran5:arm64 (14-20240330-1) ... Setting up autoconf (2.71-3) ... 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Setting up libsz2:arm64 (1.1.3-1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up libxdmcp6:arm64 (1:1.1.2-3+b1) ... Setting up liblapack3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libxcb1:arm64 (1.15-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libwebpdemux2:arm64 (1.4.0-0.1) ... Setting up libldap-2.5-0:arm64 (2.5.17+dfsg-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libfreetype6:arm64 (2.13.2+dfsg-1+b4) ... Setting up libjs-jquery-metadata (12-4) ... Setting up libjs-jquery-isonscreen (1.2.0-1.1) ... Setting up libgssapi-krb5-2:arm64 (1.20.1-6+b1) ... Setting up libjs-sphinxdoc (7.2.6-6) ... Setting up libreadline8t64:arm64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libjs-jquery-tablesorter (1:2.31.3+dfsg1-3) ... Setting up groff-base (1.23.0-4) ... Setting up xml-core (0.19) ... Setting up libxslt1.1:arm64 (1.1.35-1+b1) ... Setting up libx11-6:arm64 (2:1.8.7-1+b1) ... Setting up libharfbuzz0b:arm64 (8.3.0-2+b1) ... Setting up libfontconfig1:arm64 (2.15.0-1.1) ... Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1+b1) ... Setting up libpython3.12-stdlib:arm64 (3.12.3-1) ... Setting up libxrender1:arm64 (1:0.9.10-1.1+b1) ... Setting up libcurl4t64:arm64 (8.7.1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:arm64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libpython3.11t64:arm64 (3.11.9-1) ... Setting up libxext6:arm64 (2:1.3.4-1+b1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3.12t64:arm64 (3.12.3-1) ... Setting up libpython3.11-dev:arm64 (3.11.9-1) ... Setting up libraqm0:arm64 (0.10.1-1+b1) ... Setting up sphinx-common (7.2.6-6) ... Setting up libxss1:arm64 (1:1.2.3-1+b1) ... Setting up libhdf5-103-1t64:arm64 (1.10.10+repack-3.3) ... Setting up libpython3-stdlib:arm64 (3.11.8-1) ... Setting up libhdf5-hl-100t64:arm64 (1.10.10+repack-3.3) ... Setting up python3.11 (3.11.9-1) ... Setting up libxft2:arm64 (2.3.6-1+b1) ... Setting up libpython3-dev:arm64 (3.11.8-1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up libtk8.6:arm64 (8.6.14-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libpython3.12-dev:arm64 (3.12.3-1) ... Setting up python3-markupsafe (2.1.5-1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-6) ... Setting up python3-pil:arm64 (10.3.0-2) ... Setting up python3-roman (3.3-3) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-jinja2 (3.1.3-1) ... Setting up python3-packaging (24.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-certifi (2023.11.17-1) ... Setting up python3-snowballstemmer (2.2.0-4) ... Setting up libpython3-all-dev:arm64 (3.11.8-1) ... Setting up python3-brotli (1.1.0-2+b3) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.5-1) ... Setting up python3-idna (3.6-2) ... Setting up python3.12-dev (3.12.3-1) ... Setting up cython3 (3.0.10+dfsg-5) ... Setting up python3-urllib3 (1.26.18-2) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-lxml:arm64 (5.1.0-1) ... Setting up python3-dateutil (2.9.0-2) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-imagesize (1.4.1-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... python3.12: can't get files for byte-compilation Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-sympy (1.12-7) ... Setting up python3-attr (23.2.0-2) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-babel (2.14.0-1) ... update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode Setting up python3-colorama (0.4.6-4) ... Setting up python3-lz4 (4.0.2+dfsg-1+b3) ... Setting up python3-charset-normalizer (3.3.2-1) ... Setting up python3-pytest (7.4.4-3) ... Setting up python3-alabaster (0.7.12-1) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3-tabulate (0.8.10-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-coverage (7.2.7+dfsg1-1+b1) ... Setting up python3-tk:arm64 (3.12.3-1) ... Setting up python3-pytest-cov (5.0.0-1) ... Setting up python3-click (8.1.7-1) ... Setting up python3-fs (2.4.16-4) ... Setting up python3-pygments (2.17.2+dfsg-1) ... Setting up python3-chardet (5.2.0+dfsg-1) ... Setting up python3-pil.imagetk:arm64 (10.3.0-2) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-requests (2.31.0+dfsg-1) ... Setting up python3-numpy (1:1.26.4+ds-8) ... Setting up python3-contourpy (1.0.7-3) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... Setting up python3-scipy (1.11.4-6) ... Setting up python3-pandas-lib:arm64 (2.1.4+dfsg-8) ... Setting up python3-h5py-serial (3.10.0-1+b3) ... Setting up python3-pandas (2.1.4+dfsg-8) ... Setting up python3-h5py (3.10.0-1) ... Setting up python3-fonttools (4.46.0-1) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-matplotlib (3.6.3-2) ... Processing triggers for libc-bin (2.38-10) ... Processing triggers for sgml-base (1.31) ... Setting up docutils-common (0.20.1+dfsg-3) ... Processing triggers for sgml-base (1.31) ... Setting up python3-docutils (0.20.1+dfsg-3) ... Setting up python3-sphinx (7.2.6-6) ... Setting up python3-numpydoc (1.6.0-2) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: user script /srv/workspace/pbuilder/254940/tmp/hooks/A99_set_merged_usr starting Not re-configuring usrmerge for trixie I: user script /srv/workspace/pbuilder/254940/tmp/hooks/A99_set_merged_usr finished hostname: Name or service not known I: Running cd /build/reproducible-path/python-biom-format-2.1.15.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/i/capture/the/path" HOME="/nonexistent/second-build" dpkg-genchanges -S > ../python-biom-format_2.1.15.2-3_source.changes dpkg-buildpackage: info: source package python-biom-format dpkg-buildpackage: info: source version 2.1.15.2-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with bash-completion,sphinxdoc --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p "3.12 3.11" I: pybuild base:311: python3.12 setup.py clean /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-biom-format-2.1.15.2/biom/_filter.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-biom-format-2.1.15.2/biom/_subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-biom-format-2.1.15.2/biom/_transform.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling biom/_filter.pyx because it changed. Compiling biom/_transform.pyx because it changed. Compiling biom/_subsample.pyx because it changed. [1/3] Cythonizing biom/_filter.pyx [2/3] Cythonizing biom/_subsample.pyx [3/3] Cythonizing biom/_transform.pyx running clean removing '/build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it I: pybuild base:311: python3.11 setup.py clean running clean removing '/build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars ./biom/_filter.c ./biom/_subsample.c ./biom/_transform.c debian/files rm -fr -- debian/python3-biom-format/ debian/tmp/ debian/python-biom-format-doc/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --with bash-completion,sphinxdoc --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p "3.12 3.11" I: pybuild base:311: python3.12 setup.py config /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-biom-format-2.1.15.2/biom/_filter.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-biom-format-2.1.15.2/biom/_subsample.pyx tree = Parsing.p_module(s, pxd, full_module_name) /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:381: FutureWarning: Cython directive 'language_level' not set, using '3str' for now (Py3). This has changed from earlier releases! File: /build/reproducible-path/python-biom-format-2.1.15.2/biom/_transform.pyx tree = Parsing.p_module(s, pxd, full_module_name) Compiling biom/_filter.pyx because it changed. Compiling biom/_transform.pyx because it changed. Compiling biom/_subsample.pyx because it changed. [1/3] Cythonizing biom/_filter.pyx [2/3] Cythonizing biom/_subsample.pyx [3/3] Cythonizing biom/_transform.pyx running config I: pybuild base:311: python3.11 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/python-biom-format-2.1.15.2' # arch USE_CYTHON=true dh_auto_build pybuild --build -i python{version} -p "3.12 3.11" I: pybuild base:311: /usr/bin/python3.12 setup.py build running build running build_py creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom copying biom/util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom copying biom/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom copying biom/table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom copying biom/parse.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom copying biom/exception.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom copying biom/err.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests copying biom/tests/test_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests copying biom/tests/test_util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests copying biom/tests/test_parse.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests copying biom/tests/test_err.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests copying biom/tests/long_lines.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests copying biom/tests/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/table_head.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/metadata_exporter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli copying biom/cli/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data copying biom/tests/test_data/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_validate_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_uc_processor.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_normalizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_converter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_summarize_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_subset_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_show_install_info.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_add_metadata.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli running egg_info creating biom_format.egg-info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt writing manifest file 'biom_format.egg-info/SOURCES.txt' dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution adding license file 'COPYING.txt' writing manifest file 'biom_format.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.assets' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.assets' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.assets' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.assets' to be distributed and are already explicitly excluding 'biom.assets' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.bench_tables' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.bench_tables' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.tests.bench_tables' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.tests.bench_tables' to be distributed and are already explicitly excluding 'biom.tests.bench_tables' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.test_cli.test_data' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.test_cli.test_data' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.tests.test_cli.test_data' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.tests.test_cli.test_data' to be distributed and are already explicitly excluding 'biom.tests.test_cli.test_data' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) copying biom/_filter.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom copying biom/_subsample.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom copying biom/_transform.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/assets creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables copying biom/tests/test_data/bad_table.txt -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data copying biom/tests/test_data/bad_table.txt.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data copying biom/tests/test_data/empty.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data copying biom/tests/test_data/no-contents.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test_grp_metadata.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.json -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data running build_ext building 'biom._filter' extension creating build creating build/temp.linux-aarch64-cpython-312 creating build/temp.linux-aarch64-cpython-312/biom aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c biom/_filter.c -o build/temp.linux-aarch64-cpython-312/biom/_filter.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_filter.c:1249: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/biom/_filter.o -L/usr/lib/aarch64-linux-gnu -o /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_filter.cpython-312-aarch64-linux-gnu.so building 'biom._transform' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c biom/_transform.c -o build/temp.linux-aarch64-cpython-312/biom/_transform.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_transform.c:1249: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/biom/_transform.o -L/usr/lib/aarch64-linux-gnu -o /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_transform.cpython-312-aarch64-linux-gnu.so building 'biom._subsample' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c biom/_subsample.c -o build/temp.linux-aarch64-cpython-312/biom/_subsample.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_subsample.c:1249: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/biom/_subsample.o -L/usr/lib/aarch64-linux-gnu -o /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_subsample.cpython-312-aarch64-linux-gnu.so I: pybuild base:311: /usr/bin/python3 setup.py build running build running build_py creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/parse.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/exception.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/err.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/test_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/test_util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/test_parse.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/test_err.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/long_lines.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests copying biom/tests/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/uc_processor.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_validator.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_summarizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_subsetter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_normalizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_ids.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_head.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/table_converter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/metadata_exporter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/metadata_adder.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/installation_informer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli copying biom/cli/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_validate_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_uc_processor.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_normalizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_table_converter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_summarize_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_subset_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_show_install_info.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/test_add_metadata.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli copying biom/tests/test_cli/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution adding license file 'COPYING.txt' writing manifest file 'biom_format.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.assets' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.assets' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.assets' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.assets' to be distributed and are already explicitly excluding 'biom.assets' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.bench_tables' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.bench_tables' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.tests.bench_tables' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.tests.bench_tables' to be distributed and are already explicitly excluding 'biom.tests.bench_tables' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.test_cli.test_data' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.test_cli.test_data' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.tests.test_cli.test_data' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.tests.test_cli.test_data' to be distributed and are already explicitly excluding 'biom.tests.test_cli.test_data' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) copying biom/_filter.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/_subsample.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom copying biom/_transform.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/assets copying biom/assets/exercise_api.py -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/assets copying biom/assets/exercise_cli.sh -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/assets creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables copying biom/tests/test_data/bad_table.txt -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/bad_table.txt.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/empty.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/no-contents.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test.json.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data copying biom/tests/test_data/test_grp_metadata.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data creating /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data copying biom/tests/test_cli/test_data/test.json -> /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data running build_ext building 'biom._filter' extension creating build/temp.linux-aarch64-cpython-311 creating build/temp.linux-aarch64-cpython-311/biom aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_filter.c -o build/temp.linux-aarch64-cpython-311/biom/_filter.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_filter.c:1249: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/biom/_filter.o -L/usr/lib/aarch64-linux-gnu -o /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.cpython-311-aarch64-linux-gnu.so building 'biom._transform' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_transform.c -o build/temp.linux-aarch64-cpython-311/biom/_transform.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_transform.c:1249: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/biom/_transform.o -L/usr/lib/aarch64-linux-gnu -o /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.cpython-311-aarch64-linux-gnu.so building 'biom._subsample' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c biom/_subsample.c -o build/temp.linux-aarch64-cpython-311/biom/_subsample.o In file included from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h:1929, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h:12, from /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h:5, from biom/_subsample.c:1249: /usr/lib/python3/dist-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/python-biom-format-2.1.15.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/biom/_subsample.o -L/usr/lib/aarch64-linux-gnu -o /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.cpython-311-aarch64-linux-gnu.so # indep: PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b html doc build/html Running Sphinx v7.2.6 making output directory... done [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst WARNING: Failed to import biom.table. Possible hints: * ModuleNotFoundError: No module named 'biom._filter' * KeyError: 'biom' WARNING: Failed to import biom. Possible hints: * ModuleNotFoundError: No module named 'biom._filter' * KeyError: 'biom' building [mo]: targets for 0 po files that are out of date writing output... building [html]: targets for 12 source files that are out of date updating environment: [new config] 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 17%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 42%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 67%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 92%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done copying assets... copying static files... done copying extra files... done done writing output... [ 8%] BIOM_LICENSE writing output... [ 17%] documentation/adding_metadata writing output... [ 25%] documentation/biom_conversion writing output... [ 33%] documentation/biom_format writing output... [ 42%] documentation/format_versions/biom-1.0 writing output... [ 50%] documentation/format_versions/biom-2.0 writing output... [ 58%] documentation/format_versions/biom-2.1 writing output... [ 67%] documentation/index writing output... [ 75%] documentation/quick_usage_examples writing output... [ 83%] documentation/summarizing_biom_tables writing output... [ 92%] documentation/table_objects writing output... [100%] index /build/reproducible-path/python-biom-format-2.1.15.2/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /build/reproducible-path/python-biom-format-2.1.15.2/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated /build/reproducible-path/python-biom-format-2.1.15.2/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/quick_usage_examples' that doesn't have a title: no link will be generated /build/reproducible-path/python-biom-format-2.1.15.2/doc/documentation/index.rst:11: WARNING: toctree contains reference to document 'documentation/table_objects' that doesn't have a title: no link will be generated generating indices... done writing additional pages... search done copying images... [100%] _static/biom-format.png dumping search index in English (code: en)... done dumping object inventory... done build succeeded, 8 warnings. The HTML pages are in build/html. PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -b man doc build/man Running Sphinx v7.2.6 making output directory... done [autosummary] generating autosummary for: BIOM_LICENSE.rst, documentation/adding_metadata.rst, documentation/biom_conversion.rst, documentation/biom_format.rst, documentation/index.rst, documentation/quick_usage_examples.rst, documentation/summarizing_biom_tables.rst, documentation/table_objects.rst, index.rst WARNING: Failed to import biom.table. Possible hints: * KeyError: 'biom' * ModuleNotFoundError: No module named 'biom._filter' WARNING: Failed to import biom. Possible hints: * KeyError: 'biom' * ModuleNotFoundError: No module named 'biom._filter' building [mo]: targets for 0 po files that are out of date writing output... building [man]: all manpages updating environment: [new config] 12 added, 0 changed, 0 removed reading sources... [ 8%] BIOM_LICENSE reading sources... [ 17%] documentation/adding_metadata reading sources... [ 25%] documentation/biom_conversion reading sources... [ 33%] documentation/biom_format reading sources... [ 42%] documentation/format_versions/biom-1.0 reading sources... [ 50%] documentation/format_versions/biom-2.0 reading sources... [ 58%] documentation/format_versions/biom-2.1 reading sources... [ 67%] documentation/index reading sources... [ 75%] documentation/quick_usage_examples reading sources... [ 83%] documentation/summarizing_biom_tables reading sources... [ 92%] documentation/table_objects reading sources... [100%] index WARNING: autodoc: failed to import module 'biom'; the following exception was raised: No module named 'biom._filter' WARNING: autodoc: failed to import module 'table' from module 'biom'; the following exception was raised: No module named 'biom._filter' looking for now-outdated files... none found pickling environment... done checking consistency... done writing... biom.1 { documentation/index documentation/biom_format documentation/format_versions/biom-1.0 documentation/format_versions/biom-2.0 documentation/format_versions/biom-2.1 documentation/quick_usage_examples documentation/table_objects documentation/biom_conversion documentation/adding_metadata documentation/summarizing_biom_tables BIOM_LICENSE } done build succeeded, 4 warnings. The manual pages are in build/man. make[1]: Leaving directory '/build/reproducible-path/python-biom-format-2.1.15.2' dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p "3.12 3.11" I: pybuild pybuild:308: cp -r /build/reproducible-path/python-biom-format-2.1.15.2/examples /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build I: pybuild base:311: cd /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build; python3.12 -m pytest ============================= test session starts ============================== platform linux -- Python 3.12.3, pytest-7.4.4, pluggy-1.5.0 rootdir: /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build configfile: pytest.ini testpaths: biom plugins: cov-5.0.0 collected 376 items biom/tests/test_err.py ..................... [ 5%] biom/tests/test_parse.py ........................... [ 12%] biom/tests/test_table.py ............................................... [ 25%] ..sss................................................................... [ 44%] .....sss................................................................ [ 63%] ..................................................................... [ 81%] biom/tests/test_util.py .................... [ 87%] biom/tests/test_cli/test_add_metadata.py .... [ 88%] biom/tests/test_cli/test_show_install_info.py . [ 88%] biom/tests/test_cli/test_subset_table.py ..... [ 89%] biom/tests/test_cli/test_summarize_table.py .. [ 90%] biom/tests/test_cli/test_table_converter.py ...... [ 92%] biom/tests/test_cli/test_table_normalizer.py . [ 92%] biom/tests/test_cli/test_uc_processor.py ...... [ 93%] biom/tests/test_cli/test_validate_table.py ....................... [100%] ======================== 370 passed, 6 skipped in 4.66s ======================== I: pybuild pybuild:308: cp -r /build/reproducible-path/python-biom-format-2.1.15.2/examples /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build I: pybuild base:311: cd /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build; python3.11 -m pytest ============================= test session starts ============================== platform linux -- Python 3.11.9, pytest-7.4.4, pluggy-1.5.0 rootdir: /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build configfile: pytest.ini testpaths: biom plugins: cov-5.0.0 collected 376 items biom/tests/test_err.py ..................... [ 5%] biom/tests/test_parse.py ........................... [ 12%] biom/tests/test_table.py ............................................... [ 25%] ..sss................................................................... [ 44%] .....sss................................................................ [ 63%] ..................................................................... [ 81%] biom/tests/test_util.py .................... [ 87%] biom/tests/test_cli/test_add_metadata.py .... [ 88%] biom/tests/test_cli/test_show_install_info.py . [ 88%] biom/tests/test_cli/test_subset_table.py ..... [ 89%] biom/tests/test_cli/test_summarize_table.py .. [ 90%] biom/tests/test_cli/test_table_converter.py ...... [ 92%] biom/tests/test_cli/test_table_normalizer.py . [ 92%] biom/tests/test_cli/test_uc_processor.py ...... [ 93%] biom/tests/test_cli/test_validate_table.py ....................... [100%] ======================= 370 passed, 6 skipped in 10.55s ======================== rm -fr -- /tmp/dh-xdg-rundir-NDXD4wK6 create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-biom-format.substvars debian/python-biom-format-doc.substvars rm -fr -- debian/.debhelper/generated/python3-biom-format/ debian/python3-biom-format/ debian/tmp/ debian/.debhelper/generated/python-biom-format-doc/ debian/python-biom-format-doc/ rm -f debian/python-biom-format-doc.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/python-biom-format-2.1.15.2' dh_auto_install install -m0755 -d /build/reproducible-path/python-biom-format-2.1.15.2/debian/tmp pybuild --install -i python{version} -p "3.12 3.11" --dest-dir /build/reproducible-path/python-biom-format-2.1.15.2/debian/tmp I: pybuild base:311: /usr/bin/python3.12 setup.py install --root /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution adding license file 'COPYING.txt' writing manifest file 'biom_format.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.assets' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.assets' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.assets' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.assets' to be distributed and are already explicitly excluding 'biom.assets' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.bench_tables' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.bench_tables' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.tests.bench_tables' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.tests.bench_tables' to be distributed and are already explicitly excluding 'biom.tests.bench_tables' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.test_cli.test_data' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.test_cli.test_data' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.tests.test_cli.test_data' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.tests.test_cli.test_data' to be distributed and are already explicitly excluding 'biom.tests.test_cli.test_data' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) running build_ext running install_lib creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12 creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/.pytest_cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/.pytest_cache/CACHEDIR.TAG -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/.pytest_cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/.pytest_cache/.gitignore -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/.pytest_cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/.pytest_cache/README.md -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/.pytest_cache creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/.pytest_cache/v creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/.pytest_cache/v/cache/stepwise -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/.pytest_cache/v/cache/nodeids -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/.pytest_cache/v/cache creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/examples/sam_md.txt -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/examples/rich_sparse_otu_table_hdf5_group_metadata.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/examples/rich_sparse_otu_table.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/examples/obs_md.txt -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/examples/min_sparse_otu_table.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/examples creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/__pycache__/parse.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/__pycache__/err.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/__pycache__/util.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/__pycache__/exception.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/__pycache__/table.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_subsample.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_transform.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_filter.cpython-312-aarch64-linux-gnu.so -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/assets copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/assets/exercise_cli.sh -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/assets copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/assets/exercise_api.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/assets copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_transform.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_subsample.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/_filter.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/table_validator.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/table_ids.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/table_head.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/table_converter.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/metadata_exporter.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/util.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/installation_informer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/metadata_adder.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/metadata_exporter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/table_converter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/table_head.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/table_ids.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/table_normalizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/table_subsetter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/table_summarizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/table_validator.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/uc_processor.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/cli/util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/__pycache__/test_util.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/__pycache__/test_table.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/__pycache__/long_lines.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/__pycache__/test_parse.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/__pycache__/test_err.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/__pycache__ creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/bench_tables creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-312-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__pycache__ creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data/test.json -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/test_grp_metadata.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/test.json.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/test.json -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/test.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/no-contents.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/empty.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/bad_table.txt -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_data/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/long_lines.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_err.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_parse.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/tests/test_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/err.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/exception.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/parse.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.12_biom-format/build/biom/util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/metadata_exporter.py to metadata_exporter.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/table_converter.py to table_converter.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/table_head.py to table_head.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/table_ids.py to table_ids.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/table_validator.py to table_validator.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/cli/util.py to util.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/long_lines.py to long_lines.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_err.py to test_err.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_parse.py to test_parse.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_util.py to test_util.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/tests/test_table.py to test_table.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/err.py to err.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/exception.py to exception.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/parse.py to parse.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/table.py to table.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom/util.py to util.cpython-312.pyc running install_egg_info Copying biom_format.egg-info to /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.12/dist-packages/biom_format-2.1.15.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/bin I: pybuild pybuild:334: dh_numpy3 mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing biom_format.egg-info/PKG-INFO writing dependency_links to biom_format.egg-info/dependency_links.txt writing entry points to biom_format.egg-info/entry_points.txt writing requirements to biom_format.egg-info/requires.txt writing top-level names to biom_format.egg-info/top_level.txt dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'biom_format.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no directories found matching 'support_files' warning: no directories found matching 'tests/test_data' no previously-included directories found matching 'docs/_build' warning: no previously-included files matching '*.pyo' found anywhere in distribution warning: no previously-included files matching '.git' found anywhere in distribution warning: no previously-included files matching '*.so' found anywhere in distribution warning: no previously-included files matching '.*.swp' found anywhere in distribution adding license file 'COPYING.txt' writing manifest file 'biom_format.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.assets' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.assets' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.assets' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.assets' to be distributed and are already explicitly excluding 'biom.assets' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.bench_tables' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.bench_tables' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.tests.bench_tables' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.tests.bench_tables' to be distributed and are already explicitly excluding 'biom.tests.bench_tables' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:204: _Warning: Package 'biom.tests.test_cli.test_data' is absent from the `packages` configuration. !! ******************************************************************************** ############################ # Package would be ignored # ############################ Python recognizes 'biom.tests.test_cli.test_data' as an importable package[^1], but it is absent from setuptools' `packages` configuration. This leads to an ambiguous overall configuration. If you want to distribute this package, please make sure that 'biom.tests.test_cli.test_data' is explicitly added to the `packages` configuration field. Alternatively, you can also rely on setuptools' discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html If you don't want 'biom.tests.test_cli.test_data' to be distributed and are already explicitly excluding 'biom.tests.test_cli.test_data' via `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`, you can try to use `exclude_package_data`, or `include-package-data=False` in combination with a more fine grained `package-data` configuration. You can read more about "package data files" on setuptools documentation page: - https://setuptools.pypa.io/en/latest/userguide/datafiles.html [^1]: For Python, any directory (with suitable naming) can be imported, even if it does not contain any `.py` files. On the other hand, currently there is no concept of package data directory, all directories are treated like packages. ******************************************************************************** !! check.warn(importable) running build_ext running install_lib creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11 creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/.pytest_cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/.pytest_cache/CACHEDIR.TAG -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/.pytest_cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/.pytest_cache/.gitignore -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/.pytest_cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/.pytest_cache/README.md -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/.pytest_cache creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/.pytest_cache/v creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/.pytest_cache/v/cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/.pytest_cache/v/cache/stepwise -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/.pytest_cache/v/cache copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/.pytest_cache/v/cache/nodeids -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/.pytest_cache/v/cache creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/examples/sam_md.txt -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/examples/rich_sparse_otu_table_hdf5_group_metadata.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/examples/rich_sparse_otu_table_hdf5.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/examples/rich_sparse_otu_table.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/examples/obs_md.txt -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/examples/min_sparse_otu_table_hdf5.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/examples/min_sparse_otu_table.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/examples creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/parse.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/err.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/util.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/exception.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/table.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.cpython-311-aarch64-linux-gnu.so -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.cpython-311-aarch64-linux-gnu.so -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.cpython-311-aarch64-linux-gnu.so -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/assets/exercise_cli.sh -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/assets/exercise_api.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_transform.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_subsample.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/_filter.pyx -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/uc_processor.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_validator.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_ids.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_head.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_normalizer.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_subsetter.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/installation_informer.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_converter.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/metadata_exporter.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/util.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/metadata_adder.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/table_summarizer.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/installation_informer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/metadata_adder.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/metadata_exporter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_converter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_head.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_ids.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_normalizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_subsetter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_summarizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/table_validator.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/uc_processor.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/cli/util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_util.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_table.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/long_lines.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_parse.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/test_err.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__pycache__ creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/100x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/1000x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x100x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x1000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.100_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.010_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench_hdf5.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/bench_tables/10000x10000x0.001_bench.biom.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/bench_tables creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_validate_table.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_uc_processor.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_table_normalizer.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_table_converter.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_summarize_table.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_subset_table.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_show_install_info.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/test_add_metadata.cpython-311-pytest-7.4.4.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__pycache__ creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/test.json -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/test.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/json_sample_collapsed.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_data/json_obs_collapsed.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_add_metadata.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_show_install_info.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_subset_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_summarize_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_table_converter.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_table_normalizer.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_uc_processor.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_cli/test_validate_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli creating /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test_grp_metadata.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.json.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.json -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/test.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/no-contents.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/empty.biom -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/bad_table.txt.gz -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/bad_table.txt -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_data/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/long_lines.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_err.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_parse.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/tests/test_table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/err.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/exception.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/parse.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/table.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/__init__.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom copying /build/reproducible-path/python-biom-format-2.1.15.2/.pybuild/cpython3_3.11_biom-format/build/biom/util.py -> /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/assets/exercise_api.py to exercise_api.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/installation_informer.py to installation_informer.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/metadata_adder.py to metadata_adder.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/metadata_exporter.py to metadata_exporter.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_converter.py to table_converter.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_head.py to table_head.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_ids.py to table_ids.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_normalizer.py to table_normalizer.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_subsetter.py to table_subsetter.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_summarizer.py to table_summarizer.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/table_validator.py to table_validator.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/uc_processor.py to uc_processor.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/cli/util.py to util.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_add_metadata.py to test_add_metadata.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_show_install_info.py to test_show_install_info.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_subset_table.py to test_subset_table.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_summarize_table.py to test_summarize_table.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_table_converter.py to test_table_converter.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_table_normalizer.py to test_table_normalizer.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_uc_processor.py to test_uc_processor.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_cli/test_validate_table.py to test_validate_table.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_data/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/long_lines.py to long_lines.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_err.py to test_err.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_parse.py to test_parse.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_util.py to test_util.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/tests/test_table.py to test_table.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/err.py to err.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/exception.py to exception.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/parse.py to parse.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/table.py to table.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom/util.py to util.cpython-311.pyc running install_egg_info Copying biom_format.egg-info to /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/lib/python3.11/dist-packages/biom_format-2.1.15.egg-info Skipping SOURCES.txt running install_scripts Installing biom script to /build/reproducible-path/python-biom-format-2.1.15.2/debian/python3-biom-format/usr/bin I: pybuild pybuild:334: dh_numpy3 mv debian/python3-biom-format.substvars.new debian/python3-biom-format.substvars find debian/python3-biom-format -name .coverage -delete make[1]: Leaving directory '/build/reproducible-path/python-biom-format-2.1.15.2' rm -f debian/python-biom-format-doc.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_installdocs-indep make[1]: Entering directory '/build/reproducible-path/python-biom-format-2.1.15.2' dh_installdocs --indep dh_installdocs: warning: Cannot auto-detect main package for python-biom-format-doc. If the default is wrong, please use --doc-main-package install -m0755 -d debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc install -m0755 -d debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc cd './build/html/..' && find 'html' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/python-biom-format-2.1.15.2/debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc chmod -R u\+rw,go=rX debian/python-biom-format-doc/usr/share/doc install -p -m0644 debian/copyright debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/copyright install -m0755 -d debian/python-biom-format-doc/usr/share/doc-base/ install -p -m0644 debian/python-biom-format-doc.doc-base debian/python-biom-format-doc/usr/share/doc-base/python-biom-format-doc.python-biom-format dh_sphinxdoc --indep ln -sf ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/language_data.js ln -sf ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/searchtools.js dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/copybutton.js ln -sf ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/sphinx_highlight.js ln -sf ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/doctools.js rm -rf debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/.doctrees rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/.buildinfo mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars mv debian/python-biom-format-doc.substvars.new debian/python-biom-format-doc.substvars make[1]: Leaving directory '/build/reproducible-path/python-biom-format-2.1.15.2' dh_installdocs -O--buildsystem=pybuild -Npython-biom-format-doc install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format cp --reflink=auto -a ./debian/README.test debian/python3-biom-format/usr/share/doc/python3-biom-format cp --reflink=auto -a ./debian/tests/run-unit-test debian/python3-biom-format/usr/share/doc/python3-biom-format chmod -R u\+rw,go=rX debian/python3-biom-format/usr/share/doc install -p -m0644 debian/copyright debian/python3-biom-format/usr/share/doc/python3-biom-format/copyright dh_sphinxdoc -O--buildsystem=pybuild dh_sphinxdoc: warning: ignoring unknown JavaScript code: debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/copybutton.js dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format install -p -m0644 debian/.debhelper/generated/python3-biom-format/dh_installchangelogs.dch.trimmed debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python3-biom-format/usr/share/doc/python3-biom-format/changelog install -m0755 -d debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc install -p -m0644 debian/.debhelper/generated/python-biom-format-doc/dh_installchangelogs.dch.trimmed debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/changelog.Debian install -p -m0644 ./ChangeLog.md debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/changelog rm -f debian/python-biom-format-doc.debhelper.log debian/rules override_dh_installexamples make[1]: Entering directory '/build/reproducible-path/python-biom-format-2.1.15.2' dh_installexamples install -m0755 -d debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/min_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/min_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/obs_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/rich_sparse_otu_table.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/rich_sparse_otu_table_hdf5.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/rich_sparse_otu_table_hdf5_group_metadata.biom debian/python3-biom-format/usr/share/doc/python3-biom-format/examples cp --reflink=auto -a ./examples/sam_md.txt debian/python3-biom-format/usr/share/doc/python3-biom-format/examples find debian -name "*.c" -delete find debian -name "*.pyx" -delete # move tests from Python3 package to examples package if [ ! -d biom/tests ] ; then \ mv `find debian/python*biom-format -name tests -type d` biom ; \ else \ find debian/python*biom-format -name tests -type d | xargs rm -rf ; \ fi make[1]: Leaving directory '/build/reproducible-path/python-biom-format-2.1.15.2' dh_installman -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/usr/share/man/man1/ install -p -m0644 ./debian/biom.1 debian/python3-biom-format/usr/share/man/man1/biom.1 man-recode --to-code UTF-8 --suffix .dh-new debian/python3-biom-format/usr/share/man/man1/biom.1 mv debian/python3-biom-format/usr/share/man/man1/biom.1.dh-new debian/python3-biom-format/usr/share/man/man1/biom.1 chmod 0644 -- debian/python3-biom-format/usr/share/man/man1/biom.1 dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:179: version: 6.20240422 D: dh_python3 dh_python3:180: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:181: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:182: supported Python versions: 3.11,3.12 (default=3.11) D: dh_python3 debhelper:166: skipping package python-biom-format-doc (missing ${python3:Depends} in Depends/Recommends) D: dh_python3 debhelper:174: source=python-biom-format, binary packages=['python3-biom-format'] D: dh_python3 dh_python3:204: processing package python3-biom-format... D: dh_python3 fs:50: moving files from debian/python3-biom-format/usr/lib/python3.11/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/ D: dh_python3 fs:50: moving files from debian/python3-biom-format/usr/lib/python3.12/dist-packages to debian/python3-biom-format/usr/lib/python3/dist-packages/ D: dh_python3 fs:246: removing dist-packages/.pytest_cache D: dh_python3 fs:335: package python3-biom-format details = {'requires.txt': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.15.egg-info/requires.txt'}, 'egg-info': {'debian/python3-biom-format/usr/lib/python3/dist-packages/biom_format-2.1.15.egg-info/PKG-INFO'}, 'dist-info': set(), 'nsp.txt': set(), 'shebangs': {/usr/bin/python3}, 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': {Version('3.12'), Version('3.11')}, 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-biom-format D: dh_python3 pydist:173: trying to find dependency for click (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for h5py (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for numpy>=1.9.2 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for pandas>=0.20.0 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 pydist:173: trying to find dependency for scipy>=1.3.1 (python=None) D: dh_python3 pydist:207: dependency: module seems to be installed D: dh_python3 pydist:270: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-pandas', 'python3-h5py', 'python3:any', 'python3-scipy', 'python3-numpy', 'python3 (<< 3.13)', 'python3-click', 'python3 (>= 3.11~)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild install -m0755 -d debian/python-biom-format-doc/usr/share/lintian/overrides install -p -m0644 debian/python-biom-format-doc.lintian-overrides debian/python-biom-format-doc/usr/share/lintian/overrides/python-biom-format-doc dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/language_data.js ln -s ../../../../javascript/sphinxdoc/1.0/language_data.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/language_data.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/searchtools.js ln -s ../../../../javascript/sphinxdoc/1.0/searchtools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/searchtools.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/sphinx_highlight.js ln -s ../../../../javascript/sphinxdoc/1.0/sphinx_highlight.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/sphinx_highlight.js rm -f debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/doctools.js ln -s ../../../../javascript/sphinxdoc/1.0/doctools.js debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/doctools.js dh_strip_nondeterminism -O--buildsystem=pybuild Using 1707074193 as canonical time Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/plus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/minus.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/file.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/alert_info_32.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/bullet_orange.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/alert_warning_32.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/bg-page.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_static/biom-format.png using File::StripNondeterminism::handlers::png Normalizing debian/python-biom-format-doc/usr/share/doc/python-biom-format-doc/html/_images/biom-format.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-biom-format cd debian/python-biom-format-doc chmod a-x usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/man/man1/biom.1 gzip -9nf usr/share/doc/python3-biom-format/changelog usr/share/doc/python3-biom-format/changelog.Debian usr/share/man/man1/biom.1 cd '/build/reproducible-path/python-biom-format-2.1.15.2' chmod a-x usr/share/doc/python-biom-format-doc/changelog usr/share/doc/python-biom-format-doc/changelog.Debian gzip -9nf usr/share/doc/python-biom-format-doc/changelog usr/share/doc/python-biom-format-doc/changelog.Debian cd '/build/reproducible-path/python-biom-format-2.1.15.2' rm -f debian/python-biom-format-doc.debhelper.log debian/python3-biom-format.debhelper.log debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/python-biom-format-2.1.15.2' dh_fixperms find debian/python3-biom-format ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biom-format-doc ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python-biom-format-doc/usr/share/doc -type f -a -true -a ! -regex 'debian/python-biom-format-doc/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-biom-format/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-biom-format/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python-biom-format-doc/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python-biom-format-doc -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-biom-format/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/python3-biom-format/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian -name exercise_cli.sh -exec chmod +x \{\} \; make[1]: Leaving directory '/build/reproducible-path/python-biom-format-2.1.15.2' dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu dwz -mdebian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug -M/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug -- debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-312-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-312-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-312-aarch64-linux-gnu.so objcopy --compress-debug-sections debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug chmod 0644 -- debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu/python3-biom-format.debug dh_strip -a -O--buildsystem=pybuild install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/40/c983ffed8e8b6576eefed2741b643aa3308576.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/40/c983ffed8e8b6576eefed2741b643aa3308576.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/40/c983ffed8e8b6576eefed2741b643aa3308576.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b2 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b2/d764b11e260b09f8c94b0402e35b52e8bd4558.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b2/d764b11e260b09f8c94b0402e35b52e8bd4558.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/b2/d764b11e260b09f8c94b0402e35b52e8bd4558.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/38 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/38/a4a43def5615a6ceff0d073ed911f45880ed49.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/38/a4a43def5615a6ceff0d073ed911f45880ed49.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/38/a4a43def5615a6ceff0d073ed911f45880ed49.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/4b objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/4b/44c42facae771b145d83b5ed1a898b1d36d265.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/4b/44c42facae771b145d83b5ed1a898b1d36d265.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/4b/44c42facae771b145d83b5ed1a898b1d36d265.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-312-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a/0b1afb9372e413128a35155e6d1f96647103af.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a/0b1afb9372e413128a35155e6d1f96647103af.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-312-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/6a/0b1afb9372e413128a35155e6d1f96647103af.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-312-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/f1 objcopy --only-keep-debug --compress-debug-sections debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/f1/8f6aa733d5ed9b18873341c7e04cf1dd638466.debug chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/f1/8f6aa733d5ed9b18873341c7e04cf1dd638466.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so objcopy --add-gnu-debuglink debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.build-id/f1/8f6aa733d5ed9b18873341c7e04cf1dd638466.debug debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/python3-biom-format/usr/lib/debug/.dwz/aarch64-linux-gnu debian/.debhelper/python3-biom-format/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/python3-biom-format/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/python3-biom-format/usr/lib/debug install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc ln -s python3-biom-format debian/.debhelper/python3-biom-format/dbgsym-root/usr/share/doc/python3-biom-format-dbgsym install -m0755 -d debian/.debhelper/python3-biom-format dh_makeshlibs -a -O--buildsystem=pybuild rm -f debian/python3-biom-format/DEBIAN/shlibs dh_shlibdeps -a -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/DEBIAN dpkg-shlibdeps -Tdebian/python3-biom-format.substvars debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-312-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-311-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_transform.cpython-312-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_filter.cpython-312-aarch64-linux-gnu.so debian/python3-biom-format/usr/lib/python3/dist-packages/biom/_subsample.cpython-311-aarch64-linux-gnu.so dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/postinst cat debian/python3-biom-format.postinst.debhelper >> debian/python3-biom-format/DEBIAN/postinst chmod 0755 -- debian/python3-biom-format/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-biom-format/DEBIAN/prerm cat debian/python3-biom-format.prerm.debhelper >> debian/python3-biom-format/DEBIAN/prerm chmod 0755 -- debian/python3-biom-format/DEBIAN/prerm install -m0755 -d debian/python-biom-format-doc/DEBIAN dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python-biom-format-doc/DEBIAN echo misc:Depends= >> debian/python-biom-format-doc.substvars echo misc:Pre-Depends= >> debian/python-biom-format-doc.substvars dpkg-gencontrol -ppython-biom-format-doc -ldebian/changelog -Tdebian/python-biom-format-doc.substvars -cdebian/control -Pdebian/python-biom-format-doc install -m0755 -d debian/python3-biom-format/DEBIAN echo misc:Depends= >> debian/python3-biom-format.substvars echo misc:Pre-Depends= >> debian/python3-biom-format.substvars install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -cdebian/control -Pdebian/.debhelper/python3-biom-format/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -UProtected -UBuilt-Using -UStatic-Built-Using -DPackage=python3-biom-format-dbgsym "-DDepends=python3-biom-format (= \${binary:Version})" "-DDescription=debug symbols for python3-biom-format" "-DBuild-Ids=38a4a43def5615a6ceff0d073ed911f45880ed49 40c983ffed8e8b6576eefed2741b643aa3308576 4b44c42facae771b145d83b5ed1a898b1d36d265 6a0b1afb9372e413128a35155e6d1f96647103af b2d764b11e260b09f8c94b0402e35b52e8bd4558 f18f6aa733d5ed9b18873341c7e04cf1dd638466" -DSection=debug -UMulti-Arch -UReplaces -UBreaks dpkg-gencontrol: warning: package python-biom-format-doc: substitution variable ${python3:Depends} unused, but is defined dpkg-gencontrol: warning: package python-biom-format-doc: substitution variable ${sphinxdoc:Built-Using} unused, but is defined chmod 0644 -- debian/python-biom-format-doc/DEBIAN/control chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppython3-biom-format -ldebian/changelog -Tdebian/python3-biom-format.substvars -cdebian/control -Pdebian/python3-biom-format chmod 0644 -- debian/python3-biom-format/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-biom-format/DEBIAN cd debian/python3-biom-format >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums install -m0755 -d debian/python-biom-format-doc/DEBIAN chmod 0644 -- debian/python3-biom-format/DEBIAN/md5sums install -m0755 -d debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN cd debian/.debhelper/python3-biom-format/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/python-biom-format-doc >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/python3-biom-format/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/python-biom-format-doc/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-biom-format .. dpkg-deb --root-owner-group --build debian/.debhelper/python3-biom-format/dbgsym-root .. dpkg-deb --root-owner-group --build debian/python-biom-format-doc .. dpkg-deb: building package 'python3-biom-format' in '../python3-biom-format_2.1.15.2-3_arm64.deb'. dpkg-deb: building package 'python-biom-format-doc' in '../python-biom-format-doc_2.1.15.2-3_all.deb'. dpkg-deb: building package 'python3-biom-format-dbgsym' in '../python3-biom-format-dbgsym_2.1.15.2-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../python-biom-format_2.1.15.2-3_arm64.buildinfo dpkg-genchanges --build=binary -O../python-biom-format_2.1.15.2-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: user script /srv/workspace/pbuilder/254940/tmp/hooks/B01_cleanup starting I: user script /srv/workspace/pbuilder/254940/tmp/hooks/B01_cleanup finished I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/254940 and its subdirectories I: Current time: Tue Jun 17 07:07:14 +14 2025 I: pbuilder-time-stamp: 1750093634