I: pbuilder: network access will be disabled during build I: Current time: Sat Oct 19 23:09:45 -12 2024 I: pbuilder-time-stamp: 1729422585 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [golang-github-shenwei356-bio_0.13.3-1.dsc] I: copying [./golang-github-shenwei356-bio_0.13.3.orig.tar.gz] I: copying [./golang-github-shenwei356-bio_0.13.3-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Jun 30 04:07:00 2024 gpgv: using RSA key 4A5FD1CD115087CC03DC35C1D597897206C5F07F gpgv: issuer "maytha8thedev@gmail.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./golang-github-shenwei356-bio_0.13.3-1.dsc: no acceptable signature found dpkg-source: info: extracting golang-github-shenwei356-bio in golang-github-shenwei356-bio-0.13.3 dpkg-source: info: unpacking golang-github-shenwei356-bio_0.13.3.orig.tar.gz dpkg-source: info: unpacking golang-github-shenwei356-bio_0.13.3-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying adjust-shenwei356-kmers.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3009539/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='1c4ef511d1644661b28e77f01603cc9f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3009539' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.zYQFKssN/pbuilderrc_wzYo --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.zYQFKssN/b1 --logfile b1/build.log golang-github-shenwei356-bio_0.13.3-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 21:30 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3009539/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-golang, golang-any, golang-github-cznic-sortutil-dev, golang-github-edsrzf-mmap-go-dev, golang-github-will-rowe-nthash-dev, golang-github-zeebo-wyhash-dev, golang-github-twotwotwo-sorts-dev, golang-github-elliotwutingfeng-asciiset-dev, golang-github-shenwei356-breader-dev (>= 0.1.0~), golang-github-shenwei356-util-dev (>= 0.3.0~) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19909 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-golang; however: Package dh-golang is not installed. pbuilder-satisfydepends-dummy depends on golang-any; however: Package golang-any is not installed. pbuilder-satisfydepends-dummy depends on golang-github-cznic-sortutil-dev; however: Package golang-github-cznic-sortutil-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-edsrzf-mmap-go-dev; however: Package golang-github-edsrzf-mmap-go-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-will-rowe-nthash-dev; however: Package golang-github-will-rowe-nthash-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-zeebo-wyhash-dev; however: Package golang-github-zeebo-wyhash-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-twotwotwo-sorts-dev; however: Package golang-github-twotwotwo-sorts-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-elliotwutingfeng-asciiset-dev; however: Package golang-github-elliotwutingfeng-asciiset-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-shenwei356-breader-dev (>= 0.1.0~); however: Package golang-github-shenwei356-breader-dev is not installed. pbuilder-satisfydepends-dummy depends on golang-github-shenwei356-util-dev (>= 0.3.0~); however: Package golang-github-shenwei356-util-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-golang{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} golang-1.23-go{a} golang-1.23-src{a} golang-any{a} golang-github-burntsushi-toml-dev{a} golang-github-cespare-xxhash-dev{a} golang-github-cpuguy83-go-md2man-v2-dev{a} golang-github-cznic-mathutil-dev{a} golang-github-cznic-sortutil-dev{a} golang-github-davecgh-go-spew-dev{a} golang-github-dsnet-compress-dev{a} golang-github-dsnet-golib-dev{a} golang-github-edsrzf-mmap-go-dev{a} golang-github-elliotwutingfeng-asciiset-dev{a} golang-github-fsnotify-fsnotify-dev{a} golang-github-google-go-cmp-dev{a} golang-github-hashicorp-hcl-dev{a} golang-github-klauspost-compress-dev{a} golang-github-klauspost-pgzip-dev{a} golang-github-kr-fs-dev{a} golang-github-magiconair-properties-dev{a} golang-github-mitchellh-mapstructure-dev{a} golang-github-pelletier-go-toml-dev{a} golang-github-pelletier-go-toml.v2-dev{a} golang-github-pkg-errors-dev{a} golang-github-pkg-sftp-dev{a} golang-github-pmezard-go-difflib-dev{a} golang-github-remyoudompheng-bigfft-dev{a} golang-github-russross-blackfriday-v2-dev{a} golang-github-shenwei356-breader-dev{a} golang-github-shenwei356-natsort-dev{a} golang-github-shenwei356-util-dev{a} golang-github-shenwei356-xopen-dev{a} golang-github-shurcool-sanitized-anchor-name-dev{a} golang-github-spf13-afero-dev{a} golang-github-spf13-cast-dev{a} golang-github-spf13-cobra-dev{a} golang-github-spf13-jwalterweatherman-dev{a} golang-github-spf13-pflag-dev{a} golang-github-spf13-viper-dev{a} golang-github-stretchr-objx-dev{a} golang-github-stretchr-testify-dev{a} golang-github-subosito-gotenv-dev{a} golang-github-twotwotwo-sorts-dev{a} golang-github-ulikunitz-xz-dev{a} golang-github-will-rowe-nthash-dev{a} golang-github-zeebo-wyhash-dev{a} golang-go{a} golang-golang-x-crypto-dev{a} golang-golang-x-sys-dev{a} golang-golang-x-term-dev{a} golang-golang-x-text-dev{a} golang-gopkg-ini.v1-dev{a} golang-gopkg-yaml.v2-dev{a} golang-gopkg-yaml.v3-dev{a} golang-src{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbrotli-dev{a} libbrotli1{a} libbz2-dev{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} libzstd-dev{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx pkgconf wget 0 packages upgraded, 91 newly installed, 0 to remove and 0 not upgraded. Need to get 106 MB of archives. After unpacking 438 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.2-9 [96.6 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.191-2 [188 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-5 [9224 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.1 [630 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 dh-golang all 1.62 [24.7 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 golang-1.23-src all 1.23.2-1 [19.1 MB] Get: 32 http://deb.debian.org/debian trixie/main arm64 golang-1.23-go arm64 1.23.2-1 [23.4 MB] Get: 33 http://deb.debian.org/debian trixie/main arm64 golang-src all 2:1.23~2 [5088 B] Get: 34 http://deb.debian.org/debian trixie/main arm64 golang-go arm64 2:1.23~2 [44.3 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 golang-any arm64 2:1.23~2 [5172 B] Get: 36 http://deb.debian.org/debian trixie/main arm64 golang-github-burntsushi-toml-dev all 1.4.0-1 [116 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 golang-github-pmezard-go-difflib-dev all 1.0.0-3 [12.3 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 golang-github-shurcool-sanitized-anchor-name-dev all 1.0.0-3 [3748 B] Get: 39 http://deb.debian.org/debian trixie/main arm64 golang-github-russross-blackfriday-v2-dev all 2.1.0-1 [76.1 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 golang-github-cpuguy83-go-md2man-v2-dev all 2.0.4-1 [10.8 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 golang-github-remyoudompheng-bigfft-dev all 0.0+git20230129.24d4a6f-1 [13.2 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 golang-github-cznic-mathutil-dev all 0.0~git20201220.c6aa83b-2 [75.9 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 golang-github-cznic-sortutil-dev all 0.0~git20150617.0.4c73428-3 [5420 B] Get: 44 http://deb.debian.org/debian trixie/main arm64 golang-github-davecgh-go-spew-dev all 1.1.1-3 [30.1 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 golang-github-google-go-cmp-dev all 0.6.0-1 [86.6 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 golang-github-dsnet-golib-dev all 0.0~git20171103.1ea1667-1.1 [34.1 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 golang-github-cespare-xxhash-dev all 2.3.0-1 [10.8 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 golang-github-klauspost-compress-dev all 1.17.10+ds1-1 [33.0 MB] Get: 49 http://deb.debian.org/debian trixie/main arm64 golang-github-ulikunitz-xz-dev all 0.5.6-2 [352 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 libbrotli1 arm64 1.1.0-2+b4 [292 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 libbrotli-dev arm64 1.1.0-2+b4 [308 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 libzstd-dev arm64 1.5.6+dfsg-1 [330 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 liblzma-dev arm64 5.6.2-2 [296 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 libbz2-dev arm64 1.0.8-6 [31.9 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 golang-github-dsnet-compress-dev all 0.0.2~git20230904.39efe44+dfsg1-2 [189 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 golang-golang-x-sys-dev all 0.22.0-1 [431 kB] Get: 58 http://deb.debian.org/debian trixie/main arm64 golang-github-edsrzf-mmap-go-dev all 1.1.0-1 [8532 B] Get: 59 http://deb.debian.org/debian trixie/main arm64 golang-github-elliotwutingfeng-asciiset-dev all 0.0~git20240214.24af97c-2 [6252 B] Get: 60 http://deb.debian.org/debian trixie/main arm64 golang-github-fsnotify-fsnotify-dev all 1.7.0-1 [45.6 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 golang-github-hashicorp-hcl-dev all 1.0.0-1.1 [58.8 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 golang-github-klauspost-pgzip-dev all 1.2.6-1 [115 kB] Get: 63 http://deb.debian.org/debian trixie/main arm64 golang-github-kr-fs-dev all 0.1.0-2 [6412 B] Get: 64 http://deb.debian.org/debian trixie/main arm64 golang-github-magiconair-properties-dev all 1.8.7-1 [29.5 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 golang-github-mitchellh-mapstructure-dev all 1.5.0+git20231216.8508981-1 [29.3 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 golang-gopkg-yaml.v2-dev all 2.4.0-4 [61.5 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 golang-github-pelletier-go-toml-dev all 1.9.5-1 [77.6 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 golang-github-pelletier-go-toml.v2-dev all 2.2.1-1 [876 kB] Get: 69 http://deb.debian.org/debian trixie/main arm64 golang-github-pkg-errors-dev all 0.9.1-3 [12.9 kB] Get: 70 http://deb.debian.org/debian trixie/main arm64 golang-golang-x-term-dev all 0.22.0-1 [14.8 kB] Get: 71 http://deb.debian.org/debian trixie/main arm64 golang-golang-x-text-dev all 0.16.0-1 [4003 kB] Get: 72 http://deb.debian.org/debian trixie/main arm64 golang-golang-x-crypto-dev all 1:0.25.0-1 [1682 kB] Get: 73 http://deb.debian.org/debian trixie/main arm64 golang-github-pkg-sftp-dev all 1.13.6-1 [102 kB] Get: 74 http://deb.debian.org/debian trixie/main arm64 golang-github-twotwotwo-sorts-dev all 0.0~git20160814.bf5c1f2-3 [19.7 kB] Get: 75 http://deb.debian.org/debian trixie/main arm64 golang-github-shenwei356-xopen-dev all 0.0~git20231203.5ad79ea-1 [6204 B] Get: 76 http://deb.debian.org/debian trixie/main arm64 golang-github-shenwei356-breader-dev all 0.3.2-1 [6236 B] Get: 77 http://deb.debian.org/debian trixie/main arm64 golang-github-shenwei356-natsort-dev all 0.0~git20190418.600d539-3 [3812 B] Get: 78 http://deb.debian.org/debian trixie/main arm64 golang-github-spf13-pflag-dev all 1.0.6~git20210604-d5e0c0615ace-1 [43.0 kB] Get: 79 http://deb.debian.org/debian trixie/main arm64 golang-github-spf13-afero-dev all 1.11.0-1 [58.3 kB] Get: 80 http://deb.debian.org/debian trixie/main arm64 golang-github-spf13-cast-dev all 1.6.0-1 [13.9 kB] Get: 81 http://deb.debian.org/debian trixie/main arm64 golang-github-stretchr-objx-dev all 0.5.2-1 [25.5 kB] Get: 82 http://deb.debian.org/debian trixie/main arm64 golang-gopkg-yaml.v3-dev all 3.0.1-3 [74.3 kB] Get: 83 http://deb.debian.org/debian trixie/main arm64 golang-github-stretchr-testify-dev all 1.9.0-1 [74.7 kB] Get: 84 http://deb.debian.org/debian trixie/main arm64 golang-github-spf13-jwalterweatherman-dev all 1.1.0+really1.1.0-2 [8084 B] Get: 85 http://deb.debian.org/debian trixie/main arm64 golang-github-subosito-gotenv-dev all 1.3.0-1 [9340 B] Get: 86 http://deb.debian.org/debian trixie/main arm64 golang-gopkg-ini.v1-dev all 1.67.0-1 [39.9 kB] Get: 87 http://deb.debian.org/debian trixie/main arm64 golang-github-spf13-viper-dev all 1.12.0-1 [68.9 kB] Get: 88 http://deb.debian.org/debian trixie/main arm64 golang-github-spf13-cobra-dev all 1.8.1-1 [75.2 kB] Get: 89 http://deb.debian.org/debian trixie/main arm64 golang-github-shenwei356-util-dev all 0.5.2-1 [18.4 kB] Get: 90 http://deb.debian.org/debian trixie/main arm64 golang-github-will-rowe-nthash-dev all 0.4.0-1 [5644 B] Get: 91 http://deb.debian.org/debian trixie/main arm64 golang-github-zeebo-wyhash-dev all 0.0.1-3 [23.5 kB] Fetched 106 MB in 1s (134 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19909 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_arm64.deb ... 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Preparing to unpack .../42-golang-github-cznic-sortutil-dev_0.0~git20150617.0.4c73428-3_all.deb ... Unpacking golang-github-cznic-sortutil-dev (0.0~git20150617.0.4c73428-3) ... Selecting previously unselected package golang-github-davecgh-go-spew-dev. Preparing to unpack .../43-golang-github-davecgh-go-spew-dev_1.1.1-3_all.deb ... Unpacking golang-github-davecgh-go-spew-dev (1.1.1-3) ... Selecting previously unselected package golang-github-google-go-cmp-dev. Preparing to unpack .../44-golang-github-google-go-cmp-dev_0.6.0-1_all.deb ... Unpacking golang-github-google-go-cmp-dev (0.6.0-1) ... Selecting previously unselected package golang-github-dsnet-golib-dev. Preparing to unpack .../45-golang-github-dsnet-golib-dev_0.0~git20171103.1ea1667-1.1_all.deb ... Unpacking golang-github-dsnet-golib-dev (0.0~git20171103.1ea1667-1.1) ... Selecting previously unselected package golang-github-cespare-xxhash-dev. Preparing to unpack .../46-golang-github-cespare-xxhash-dev_2.3.0-1_all.deb ... 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Unpacking libzstd-dev:arm64 (1.5.6+dfsg-1) ... Selecting previously unselected package liblzma-dev:arm64. Preparing to unpack .../52-liblzma-dev_5.6.2-2_arm64.deb ... Unpacking liblzma-dev:arm64 (5.6.2-2) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../53-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ... Selecting previously unselected package libbz2-dev:arm64. Preparing to unpack .../54-libbz2-dev_1.0.8-6_arm64.deb ... Unpacking libbz2-dev:arm64 (1.0.8-6) ... Selecting previously unselected package golang-github-dsnet-compress-dev. Preparing to unpack .../55-golang-github-dsnet-compress-dev_0.0.2~git20230904.39efe44+dfsg1-2_all.deb ... Unpacking golang-github-dsnet-compress-dev (0.0.2~git20230904.39efe44+dfsg1-2) ... Selecting previously unselected package golang-golang-x-sys-dev. Preparing to unpack .../56-golang-golang-x-sys-dev_0.22.0-1_all.deb ... Unpacking golang-golang-x-sys-dev (0.22.0-1) ... Selecting previously unselected package golang-github-edsrzf-mmap-go-dev. Preparing to unpack .../57-golang-github-edsrzf-mmap-go-dev_1.1.0-1_all.deb ... Unpacking golang-github-edsrzf-mmap-go-dev (1.1.0-1) ... Selecting previously unselected package golang-github-elliotwutingfeng-asciiset-dev. Preparing to unpack .../58-golang-github-elliotwutingfeng-asciiset-dev_0.0~git20240214.24af97c-2_all.deb ... Unpacking golang-github-elliotwutingfeng-asciiset-dev (0.0~git20240214.24af97c-2) ... Selecting previously unselected package golang-github-fsnotify-fsnotify-dev. Preparing to unpack .../59-golang-github-fsnotify-fsnotify-dev_1.7.0-1_all.deb ... Unpacking golang-github-fsnotify-fsnotify-dev (1.7.0-1) ... Selecting previously unselected package golang-github-hashicorp-hcl-dev. Preparing to unpack .../60-golang-github-hashicorp-hcl-dev_1.0.0-1.1_all.deb ... Unpacking golang-github-hashicorp-hcl-dev (1.0.0-1.1) ... 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Preparing to unpack .../65-golang-gopkg-yaml.v2-dev_2.4.0-4_all.deb ... Unpacking golang-gopkg-yaml.v2-dev (2.4.0-4) ... Selecting previously unselected package golang-github-pelletier-go-toml-dev. Preparing to unpack .../66-golang-github-pelletier-go-toml-dev_1.9.5-1_all.deb ... Unpacking golang-github-pelletier-go-toml-dev (1.9.5-1) ... Selecting previously unselected package golang-github-pelletier-go-toml.v2-dev. Preparing to unpack .../67-golang-github-pelletier-go-toml.v2-dev_2.2.1-1_all.deb ... Unpacking golang-github-pelletier-go-toml.v2-dev (2.2.1-1) ... Selecting previously unselected package golang-github-pkg-errors-dev. Preparing to unpack .../68-golang-github-pkg-errors-dev_0.9.1-3_all.deb ... Unpacking golang-github-pkg-errors-dev (0.9.1-3) ... Selecting previously unselected package golang-golang-x-term-dev. Preparing to unpack .../69-golang-golang-x-term-dev_0.22.0-1_all.deb ... Unpacking golang-golang-x-term-dev (0.22.0-1) ... Selecting previously unselected package golang-golang-x-text-dev. Preparing to unpack .../70-golang-golang-x-text-dev_0.16.0-1_all.deb ... Unpacking golang-golang-x-text-dev (0.16.0-1) ... Selecting previously unselected package golang-golang-x-crypto-dev. Preparing to unpack .../71-golang-golang-x-crypto-dev_1%3a0.25.0-1_all.deb ... Unpacking golang-golang-x-crypto-dev (1:0.25.0-1) ... Selecting previously unselected package golang-github-pkg-sftp-dev. Preparing to unpack .../72-golang-github-pkg-sftp-dev_1.13.6-1_all.deb ... Unpacking golang-github-pkg-sftp-dev (1.13.6-1) ... Selecting previously unselected package golang-github-twotwotwo-sorts-dev. Preparing to unpack .../73-golang-github-twotwotwo-sorts-dev_0.0~git20160814.bf5c1f2-3_all.deb ... Unpacking golang-github-twotwotwo-sorts-dev (0.0~git20160814.bf5c1f2-3) ... Selecting previously unselected package golang-github-shenwei356-xopen-dev. Preparing to unpack .../74-golang-github-shenwei356-xopen-dev_0.0~git20231203.5ad79ea-1_all.deb ... Unpacking golang-github-shenwei356-xopen-dev (0.0~git20231203.5ad79ea-1) ... Selecting previously unselected package golang-github-shenwei356-breader-dev. Preparing to unpack .../75-golang-github-shenwei356-breader-dev_0.3.2-1_all.deb ... Unpacking golang-github-shenwei356-breader-dev (0.3.2-1) ... Selecting previously unselected package golang-github-shenwei356-natsort-dev. Preparing to unpack .../76-golang-github-shenwei356-natsort-dev_0.0~git20190418.600d539-3_all.deb ... Unpacking golang-github-shenwei356-natsort-dev (0.0~git20190418.600d539-3) ... Selecting previously unselected package golang-github-spf13-pflag-dev. Preparing to unpack .../77-golang-github-spf13-pflag-dev_1.0.6~git20210604-d5e0c0615ace-1_all.deb ... Unpacking golang-github-spf13-pflag-dev (1.0.6~git20210604-d5e0c0615ace-1) ... Selecting previously unselected package golang-github-spf13-afero-dev. Preparing to unpack .../78-golang-github-spf13-afero-dev_1.11.0-1_all.deb ... Unpacking golang-github-spf13-afero-dev (1.11.0-1) ... Selecting previously unselected package golang-github-spf13-cast-dev. Preparing to unpack .../79-golang-github-spf13-cast-dev_1.6.0-1_all.deb ... Unpacking golang-github-spf13-cast-dev (1.6.0-1) ... Selecting previously unselected package golang-github-stretchr-objx-dev. Preparing to unpack .../80-golang-github-stretchr-objx-dev_0.5.2-1_all.deb ... Unpacking golang-github-stretchr-objx-dev (0.5.2-1) ... Selecting previously unselected package golang-gopkg-yaml.v3-dev. Preparing to unpack .../81-golang-gopkg-yaml.v3-dev_3.0.1-3_all.deb ... Unpacking golang-gopkg-yaml.v3-dev (3.0.1-3) ... Selecting previously unselected package golang-github-stretchr-testify-dev. Preparing to unpack .../82-golang-github-stretchr-testify-dev_1.9.0-1_all.deb ... Unpacking golang-github-stretchr-testify-dev (1.9.0-1) ... Selecting previously unselected package golang-github-spf13-jwalterweatherman-dev. Preparing to unpack .../83-golang-github-spf13-jwalterweatherman-dev_1.1.0+really1.1.0-2_all.deb ... Unpacking golang-github-spf13-jwalterweatherman-dev (1.1.0+really1.1.0-2) ... Selecting previously unselected package golang-github-subosito-gotenv-dev. Preparing to unpack .../84-golang-github-subosito-gotenv-dev_1.3.0-1_all.deb ... Unpacking golang-github-subosito-gotenv-dev (1.3.0-1) ... Selecting previously unselected package golang-gopkg-ini.v1-dev. Preparing to unpack .../85-golang-gopkg-ini.v1-dev_1.67.0-1_all.deb ... Unpacking golang-gopkg-ini.v1-dev (1.67.0-1) ... Selecting previously unselected package golang-github-spf13-viper-dev. Preparing to unpack .../86-golang-github-spf13-viper-dev_1.12.0-1_all.deb ... Unpacking golang-github-spf13-viper-dev (1.12.0-1) ... Selecting previously unselected package golang-github-spf13-cobra-dev. Preparing to unpack .../87-golang-github-spf13-cobra-dev_1.8.1-1_all.deb ... Unpacking golang-github-spf13-cobra-dev (1.8.1-1) ... Selecting previously unselected package golang-github-shenwei356-util-dev. Preparing to unpack .../88-golang-github-shenwei356-util-dev_0.5.2-1_all.deb ... Unpacking golang-github-shenwei356-util-dev (0.5.2-1) ... Selecting previously unselected package golang-github-will-rowe-nthash-dev. Preparing to unpack .../89-golang-github-will-rowe-nthash-dev_0.4.0-1_all.deb ... Unpacking golang-github-will-rowe-nthash-dev (0.4.0-1) ... Selecting previously unselected package golang-github-zeebo-wyhash-dev. Preparing to unpack .../90-golang-github-zeebo-wyhash-dev_0.0.1-3_all.deb ... Unpacking golang-github-zeebo-wyhash-dev (0.0.1-3) ... Setting up golang-github-pelletier-go-toml.v2-dev (2.2.1-1) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up golang-github-google-go-cmp-dev (0.6.0-1) ... Setting up golang-github-elliotwutingfeng-asciiset-dev (0.0~git20240214.24af97c-2) ... Setting up golang-gopkg-yaml.v2-dev (2.4.0-4) ... Setting up libicu72:arm64 (72.1-5) ... Setting up libzstd-dev:arm64 (1.5.6+dfsg-1) ... Setting up golang-github-mitchellh-mapstructure-dev (1.5.0+git20231216.8508981-1) ... Setting up bsdextrautils (2.40.2-9) ... Setting up golang-github-shurcool-sanitized-anchor-name-dev (1.0.0-3) ... Setting up golang-github-stretchr-objx-dev (0.5.2-1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up golang-github-pkg-errors-dev (0.9.1-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up golang-gopkg-yaml.v3-dev (3.0.1-3) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:arm64 (1.1.0-2+b4) ... Setting up golang-github-burntsushi-toml-dev (1.4.0-1) ... Setting up golang-golang-x-sys-dev (0.22.0-1) ... Setting up golang-github-kr-fs-dev (0.1.0-2) ... Setting up libmagic1t64:arm64 (1:5.45-3) ... Setting up golang-github-subosito-gotenv-dev (1.3.0-1) ... Setting up golang-github-pmezard-go-difflib-dev (1.0.0-3) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up golang-github-dsnet-golib-dev (0.0~git20171103.1ea1667-1.1) ... Setting up golang-golang-x-term-dev (0.22.0-1) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:arm64 (0.191-2) ... Setting up golang-github-cespare-xxhash-dev (2.3.0-1) ... Setting up golang-github-spf13-pflag-dev (1.0.6~git20210604-d5e0c0615ace-1) ... Setting up golang-github-davecgh-go-spew-dev (1.1.1-3) ... Setting up autotools-dev (20220109.1) ... Setting up golang-github-shenwei356-natsort-dev (0.0~git20190418.600d539-3) ... Setting up golang-github-stretchr-testify-dev (1.9.0-1) ... Setting up golang-github-twotwotwo-sorts-dev (0.0~git20160814.bf5c1f2-3) ... Setting up golang-gopkg-ini.v1-dev (1.67.0-1) ... Setting up golang-1.23-src (1.23.2-1) ... Setting up autopoint (0.22.5-2) ... Setting up golang-github-magiconair-properties-dev (1.8.7-1) ... Setting up golang-github-hashicorp-hcl-dev (1.0.0-1.1) ... Setting up golang-github-klauspost-compress-dev (1.17.10+ds1-1) ... Setting up golang-github-remyoudompheng-bigfft-dev (0.0+git20230129.24d4a6f-1) ... Setting up autoconf (2.72-3) ... Setting up golang-github-will-rowe-nthash-dev (0.4.0-1) ... Setting up liblzma-dev:arm64 (5.6.2-2) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up golang-golang-x-text-dev (0.16.0-1) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up golang-github-spf13-cast-dev (1.6.0-1) ... Setting up golang-github-fsnotify-fsnotify-dev (1.7.0-1) ... Setting up golang-github-klauspost-pgzip-dev (1.2.6-1) ... Setting up golang-golang-x-crypto-dev (1:0.25.0-1) ... Setting up golang-github-pelletier-go-toml-dev (1.9.5-1) ... Setting up golang-github-zeebo-wyhash-dev (0.0.1-3) ... Setting up golang-github-spf13-jwalterweatherman-dev (1.1.0+really1.1.0-2) ... Setting up golang-github-edsrzf-mmap-go-dev (1.1.0-1) ... Setting up golang-src (2:1.23~2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up libbrotli-dev:arm64 (1.1.0-2+b4) ... Setting up golang-github-ulikunitz-xz-dev (0.5.6-2) ... Setting up libbz2-dev:arm64 (1.0.8-6) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up golang-github-russross-blackfriday-v2-dev (2.1.0-1) ... Setting up libtool (2.4.7-7) ... Setting up golang-github-pkg-sftp-dev (1.13.6-1) ... Setting up golang-github-cznic-mathutil-dev (0.0~git20201220.c6aa83b-2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up golang-1.23-go (1.23.2-1) ... Setting up golang-github-dsnet-compress-dev (0.0.2~git20230904.39efe44+dfsg1-2) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up golang-github-spf13-afero-dev (1.11.0-1) ... Setting up golang-github-cpuguy83-go-md2man-v2-dev (2.0.4-1) ... Setting up golang-go:arm64 (2:1.23~2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up golang-github-shenwei356-xopen-dev (0.0~git20231203.5ad79ea-1) ... Setting up golang-github-shenwei356-breader-dev (0.3.2-1) ... Setting up golang-github-cznic-sortutil-dev (0.0~git20150617.0.4c73428-3) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up golang-any:arm64 (2:1.23~2) ... Setting up golang-github-spf13-viper-dev (1.12.0-1) ... Setting up debhelper (13.20) ... Setting up golang-github-spf13-cobra-dev (1.8.1-1) ... Setting up golang-github-shenwei356-util-dev (0.5.2-1) ... Setting up dh-golang (1.62) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/golang-github-shenwei356-bio-0.13.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../golang-github-shenwei356-bio_0.13.3-1_source.changes dpkg-buildpackage: info: source package golang-github-shenwei356-bio dpkg-buildpackage: info: source version 0.13.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Maytham Alsudany dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --builddirectory=_build --buildsystem=golang --with=golang dh_auto_clean -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf_clean -O--builddirectory=_build -O--buildsystem=golang dh_clean -O--builddirectory=_build -O--buildsystem=golang debian/rules binary dh binary --builddirectory=_build --buildsystem=golang --with=golang dh_update_autotools_config -O--builddirectory=_build -O--buildsystem=golang dh_autoreconf -O--builddirectory=_build -O--buildsystem=golang dh_auto_configure -O--builddirectory=_build -O--buildsystem=golang dh_auto_build -O--builddirectory=_build -O--buildsystem=golang cd _build && go install -trimpath -v -p 12 github.com/shenwei356/bio/featio/gtf github.com/shenwei356/bio/seq github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/sketches github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/util internal/godebugs internal/byteorder internal/goarch internal/unsafeheader internal/cpu internal/profilerecord internal/goos math/bits cmp internal/race internal/itoa internal/abi internal/goexperiment internal/coverage/rtcov internal/chacha8rand internal/runtime/syscall runtime/internal/math unicode/utf8 sync/atomic runtime/internal/sys internal/asan unicode internal/msan github.com/dsnet/compress/bzip2/internal/sais github.com/dsnet/compress/internal crypto/internal/alias crypto/subtle crypto/internal/boring/sig log/internal math github.com/ulikunitz/xz/internal/hash container/list internal/bytealg internal/runtime/atomic unicode/utf16 vendor/golang.org/x/crypto/cryptobyte/asn1 vendor/golang.org/x/crypto/internal/alias internal/nettrace github.com/elliotwutingfeng/asciiset internal/runtime/exithook internal/stringslite runtime github.com/klauspost/compress internal/reflectlite iter internal/weak sync slices maps internal/bisect internal/singleflight internal/testlog runtime/cgo errors sort internal/godebug io internal/oserror path strconv math/rand crypto/internal/edwards25519/field vendor/golang.org/x/net/dns/dnsmessage math/rand/v2 crypto/internal/nistec/fiat syscall strings bytes crypto/internal/randutil hash hash/crc32 hash/crc64 internal/concurrent reflect crypto/internal/edwards25519 crypto crypto/rc4 crypto/cipher unique crypto/md5 bufio github.com/dsnet/compress/internal/errors vendor/golang.org/x/text/transform net/netip crypto/internal/boring crypto/des net/http/internal/ascii github.com/dsnet/compress crypto/sha256 crypto/aes crypto/sha512 crypto/hmac crypto/sha1 github.com/twotwotwo/sorts regexp/syntax vendor/golang.org/x/crypto/hkdf github.com/twotwotwo/sorts/sortutil github.com/shenwei356/bio/util regexp internal/syscall/execenv internal/syscall/unix time io/fs context internal/poll internal/fmtsort encoding/binary embed internal/filepathlite crypto/internal/nistec github.com/klauspost/compress/internal/snapref github.com/cespare/xxhash vendor/golang.org/x/crypto/chacha20 vendor/golang.org/x/crypto/internal/poly1305 github.com/zeebo/wyhash encoding/base64 golang.org/x/sys/unix os encoding/pem vendor/golang.org/x/crypto/chacha20poly1305 crypto/ecdh fmt path/filepath vendor/golang.org/x/sys/cpu net os/exec vendor/golang.org/x/crypto/sha3 encoding/hex github.com/klauspost/compress/fse log github.com/dsnet/compress/internal/prefix math/big runtime/debug compress/flate github.com/ulikunitz/xz/internal/xlog net/url vendor/golang.org/x/text/unicode/norm vendor/golang.org/x/net/http2/hpack github.com/ulikunitz/xz/lzma github.com/klauspost/compress/huff0 vendor/golang.org/x/text/unicode/bidi github.com/klauspost/compress/flate compress/gzip github.com/dsnet/compress/bzip2 mime mime/quotedprintable net/http/internal os/user github.com/shenwei356/util/byteutil github.com/will-rowe/nthash github.com/edsrzf/mmap-go vendor/golang.org/x/text/secure/bidirule github.com/ulikunitz/xz github.com/shenwei356/bio/seq vendor/golang.org/x/net/idna github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/sketches crypto/rand crypto/elliptic crypto/internal/boring/bbig encoding/asn1 crypto/internal/bigmod crypto/dsa github.com/klauspost/pgzip crypto/ed25519 crypto/internal/hpke crypto/internal/mlkem768 github.com/klauspost/compress/zstd crypto/rsa vendor/golang.org/x/crypto/cryptobyte crypto/x509/pkix crypto/ecdsa vendor/golang.org/x/net/http/httpproxy net/textproto crypto/x509 vendor/golang.org/x/net/http/httpguts mime/multipart crypto/tls net/http/httptrace net/http github.com/shenwei356/xopen github.com/shenwei356/breader github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/featio/gtf dh_auto_test -O--builddirectory=_build -O--buildsystem=golang cd _build && go test -vet=off -v -p 12 github.com/shenwei356/bio/featio/gtf github.com/shenwei356/bio/seq github.com/shenwei356/bio/seqio/fai github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/bio/sketches github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/util === RUN TestGTF {140 Twinscan inter 5141 8522 0x4000034510 []} {140 Twinscan inter_CNS 8523 9711 0x4000034530 []} {140 Twinscan inter 9712 13182 0x4000034540 []} {140 Twinscan 3UTR 65149 65487 0x4000034550 []} {140 Twinscan 3UTR 66823 66992 0x4000034560 []} {140 Twinscan stop_codon 66993 66995 0x4000034570 0x4000010310 []} {140 Twinscan CDS 66996 66999 0x4000034580 0x4000010318 []} {140 Twinscan intron_CNS 70103 70151 0x4000034590 []} {140 Twinscan CDS 70207 70294 0x40000345a0 0x4000010320 []} {140 Twinscan CDS 71696 71807 0x40000345b0 0x4000010328 []} {140 Twinscan start_codon 71805 71806 0x40000345c0 0x4000010330 []} {140 Twinscan start_codon 73222 73222 0x40000345d0 0x4000010338 []} {140 Twinscan CDS 73222 73222 0x40000345e0 0x4000010340 []} {140 Twinscan 5UTR 73223 73504 0x40000345f0 []} --- PASS: TestGTF (0.00s) === RUN TestGTF2 {381 Twinscan exon 150 200 0x4000034690 []} {381 Twinscan exon 300 401 0x40000346b0 []} {381 Twinscan CDS 380 401 0x40000346c0 0x40000103b0 []} {381 Twinscan exon 501 650 0x40000346d0 []} {381 Twinscan CDS 501 650 0x40000346e0 0x40000103b8 []} {381 Twinscan exon 700 800 0x40000346f0 []} {381 Twinscan CDS 700 707 0x4000034700 0x40000103c0 []} {381 Twinscan exon 900 1000 0x4000034710 []} {381 Twinscan start_codon 380 382 0x4000034720 0x40000103c8 []} {381 Twinscan stop_codon 708 710 0x4000034730 0x40000103d0 []} --- PASS: TestGTF2 (0.00s) === RUN TestGTF3 {NC_002516.2 genbank gene 6261828 6263564 0x40000347d0 0x4000010440 []} {NC_002516.2 genbank CDS 6261828 6263564 0x40000347f0 0x4000010448 []} {NC_002516.2 genbank gene 6263805 6264212 0x4000034800 0x4000010450 []} {NC_002516.2 genbank CDS 6263805 6264212 0x4000034810 0x4000010458 []} {NC_002516.2 genbank gene 6264227 6264361 0x4000034820 0x4000010460 []} {NC_002516.2 genbank CDS 6264227 6264361 0x4000034830 0x4000010468 []} --- PASS: TestGTF3 (0.00s) PASS ok github.com/shenwei356/bio/featio/gtf 0.014s === RUN TestAlphabet --- PASS: TestAlphabet (0.00s) === RUN TestAlphabet2 --- PASS: TestAlphabet2 (0.00s) === RUN TestBases2AmbBase --- PASS: TestBases2AmbBase (0.00s) === RUN TestAmbBase2Bases --- PASS: TestAmbBase2Bases (0.00s) === RUN TestCodonTableStranslation --- PASS: TestCodonTableStranslation (0.00s) === RUN TestPhredAndSolexa --- PASS: TestPhredAndSolexa (0.00s) === RUN TestValidateSequence --- PASS: TestValidateSequence (0.00s) === RUN TestRevCom --- PASS: TestRevCom (0.00s) === RUN TestBaseContent --- PASS: TestBaseContent (0.00s) === RUN TestSubSeq --- PASS: TestSubSeq (0.00s) === RUN TestSubSeqInplace --- PASS: TestSubSeqInplace (0.00s) PASS ok github.com/shenwei356/bio/seq 0.029s === RUN TestFastaReader --- PASS: TestFastaReader (0.00s) === RUN TestFastaReaderNotMapWholeFile --- PASS: TestFastaReaderNotMapWholeFile (0.00s) === RUN TestFastaReader2NotMapWholeFile --- PASS: TestFastaReader2NotMapWholeFile (0.00s) === RUN TestFastaReader2 --- PASS: TestFastaReader2 (0.00s) PASS ok github.com/shenwei356/bio/seqio/fai 0.053s === RUN TestFastaReader2 --- PASS: TestFastaReader2 (0.00s) === RUN TestFastaReader3 --- PASS: TestFastaReader3 (0.00s) === RUN TestFastqReadern --- PASS: TestFastqReadern (0.00s) === RUN TestFastaReader --- PASS: TestFastaReader (0.01s) === RUN TestFastqReader --- PASS: TestFastqReader (0.00s) === RUN TestFastqReader2 --- PASS: TestFastqReader2 (0.00s) === RUN TestFastqReader3 --- PASS: TestFastqReader3 (0.00s) === RUN TestBlankFile --- PASS: TestBlankFile (0.00s) === RUN TestBlankFile2 --- PASS: TestBlankFile2 (0.00s) === RUN TestEmptyFile --- PASS: TestEmptyFile (0.00s) PASS ok github.com/shenwei356/bio/seqio/fastx 0.067s === RUN TestProteinIterator --- PASS: TestProteinIterator (0.00s) === RUN TestKmerIterator --- PASS: TestKmerIterator (0.00s) === RUN TestHashIterator --- PASS: TestHashIterator (0.00s) === RUN TestSimHashIterator --- PASS: TestSimHashIterator (0.00s) === RUN TestProteinMinimizer --- PASS: TestProteinMinimizer (0.00s) === RUN TestMinimizer --- PASS: TestMinimizer (0.00s) === RUN TestSyncmer --- PASS: TestSyncmer (0.00s) PASS ok github.com/shenwei356/bio/sketches 0.028s === RUN TestPackTwoTaxids --- PASS: TestPackTwoTaxids (0.00s) PASS ok github.com/shenwei356/bio/taxdump 0.016s === RUN Test --- PASS: Test (0.00s) PASS ok github.com/shenwei356/bio/util 0.008s create-stamp debian/debhelper-build-stamp dh_testroot -O--builddirectory=_build -O--buildsystem=golang dh_prep -O--builddirectory=_build -O--buildsystem=golang dh_auto_install --destdir=debian/golang-github-shenwei356-bio-dev/ -O--builddirectory=_build -O--buildsystem=golang debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/golang-github-shenwei356-bio-0.13.3' dh_install find debian \( -name "*.go" -o -name "*.fa" \) -exec chmod -x \{\} \; make[1]: Leaving directory '/build/reproducible-path/golang-github-shenwei356-bio-0.13.3' dh_installdocs -O--builddirectory=_build -O--buildsystem=golang dh_installchangelogs -O--builddirectory=_build -O--buildsystem=golang dh_installsystemduser -O--builddirectory=_build -O--buildsystem=golang dh_perl -O--builddirectory=_build -O--buildsystem=golang dh_link -O--builddirectory=_build -O--buildsystem=golang dh_strip_nondeterminism -O--builddirectory=_build -O--buildsystem=golang dh_compress -O--builddirectory=_build -O--buildsystem=golang dh_fixperms -O--builddirectory=_build -O--buildsystem=golang dh_missing -O--builddirectory=_build -O--buildsystem=golang dh_installdeb -O--builddirectory=_build -O--buildsystem=golang dh_golang -O--builddirectory=_build -O--buildsystem=golang dh_gencontrol -O--builddirectory=_build -O--buildsystem=golang dh_md5sums -O--builddirectory=_build -O--buildsystem=golang dh_builddeb -O--builddirectory=_build -O--buildsystem=golang dpkg-deb: building package 'golang-github-shenwei356-bio-dev' in '../golang-github-shenwei356-bio-dev_0.13.3-1_all.deb'. dpkg-genbuildinfo --build=binary -O../golang-github-shenwei356-bio_0.13.3-1_arm64.buildinfo dpkg-genchanges --build=binary -O../golang-github-shenwei356-bio_0.13.3-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3009539 and its subdirectories I: Current time: Sat Oct 19 23:10:38 -12 2024 I: pbuilder-time-stamp: 1729422638